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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_92#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 971 fasta sequence
[TACAATCGTACAACAACAATTTTTATTGCGATTACAATAGATGTGTATACAATATTTACAAATTGGAATATTTTTGCAATTGATCTTTCCATTTAAAATTTTGAATTTATAATTTTCTTCCCGTTTTTTTTTTTTTTTTTAATGACGATTACGAAAAAGTTTCCCTCTCAACAAAGTTTCTTCGTGTTTCATCATTGCGCAAGCATGCCCCTTTGTTCAAGATACGCGTTCGAAAGAGATGATTGAGGATGATTCGAGATTCATTTCAACATCTCTTGATCAAACTGTACCTATGTACTTGGGGACGTTTCATGCGCTCAGAATAAAAGGCACGATGCGTATCCAACGTTTGATTGGACAATCTTCATCTCGAAG--AAAAAAAAAAAATAACAAGAAAGATACAAACAAAGAAACAAAAAGTCATCTACGACGATATTCTTTCAAGCTGAATTTAGAAAATTATCGTCTTGATCGAAAATGTTATCGAGATTCGGAATAACGTTATCAAAGAAGAGAAATAAATTCATCTTATTTCGCTGTTACGCCTCAACTTCAGATTCGTTTGTCTCTTTGCCGTGTTCCTAACATGTATAGGTTATACAACAATTCCACACCGTATAAAACCAAGCGATACTTAGTCGAGTACGAATGCAAAACTCGAAATATCAAGATGGGAATATACAAAAAAATTTAAAAGAATCGGCCCGTGCACGTCGGCGGGCCAAAGTTCAGCGGGAATACGCTGAATTTCACAAGCCATTGTCACGTTTTGAACGTGATAGCGAGACAGTAGTACGTTGCAAAATTGATTAGCAATATTGTTAAAAAATACGGAGGGAGGAGGGGAAGGAGGGGGGAGGGAGGGAGGGAAGGAAAAATAATGGAAAAGAAGAAAATTTTTAACGAAGGAAATAATAATTAACAATTCGAGAGGATCAAGATTTTTCTCGATATTTCAAAGTTTGCGTGTT]
[+] EMBL BI506796 [TACAATCGTACAACAACAATTTTTATTGCGATTACAATAGATGTGTATACAATATTTACAAATTGGAATATTTTTGCAATTGATCTTTCCATTTAAAATTTTGAATTTATAATTTTCTTCTCGTTTTTTTTTTTTTTTTTAATGACGATTACGAAAAAGTTTCCCTCTCAACAAAGTTTCTTCGTGTTTCATCATTGCGCAAGCATGCCCCTTTGTTCAAGATACGCGTTCGAAAGAGATTATTGAGGATGATTCGAGATTCATTTCAACATCTCTTGATCAAACTGTACCTATGTACTTGGGGACGTTTCATGCGCTCAGAATAAAAGGCACGATGCGTATCCAACGTTTGATTGGACAATCTTCATCTCGAAG AAAAAAAAAAAATAACAAGAAAGATACAAACAAAGAAACAAAAAGTCATCTACGACGATATTCTTTCAAGCTGAATTTAAAAAATTATCGTCTTGA ]
[-] EMBL BI514535 [ TGCAATTGATCTTTCCATTTAAAATTTTGAATTTATAATTTTCTTCCCGTTTTTTTTTTTTTTTTTAATGACGATTACGAAAAAGTTTCCCTCTCAACAAAGTTTCTTCGTGTTTCATCATTGCGCAAGCATGCCCCTTTGTTCAAGATACGCGTTCGAAAGAGATGATTGAGGATGATTCGAGATTCATTTCAACATCTCTTGATCAAACTGTACCTATGTACTTGGGGACGTTTCATGCGCTCAGAATAAAAGGCACGATGCGTATCCAACGTTTGATTGGACAATCTTCATCTCGAAG AAAAAAAAAAAATAACAAGAAAGATACAAACAAAGAAACAAAAAGTCATCTACGACGATATTCTTTCAAGCTGAATTTAGAAAATTATCGTCTTGATCGAAAATGTTATCGAGATTCGGAATAACGTTATCAAAGAAGAGAAATAAATTCATCTTATTTCGCTGTTACG ]
[+] EMBL BI504948 [ TCAACAAAGTTTCTTCGTGTTTCATCATTGCGCAAGCATGCCCCTTTGTTCAAGATACGCGTTCGAAAGAGATGATTGAGGATGATTCGAGATTCATTTCAACATCCCTTGATCAAACTGTACCTATGTACTTGGGGACGTTTCATGCGCTCAGAATAAAAGGCACGATGCGTATCCAACGTTTGATTGGACAATCTTCATCTCGAAG AAAAAAAAAAAATAACAAGAAAGATACAAACAAAGAAACAAAAAGTCATCTACGACGATATTCTTTCAAGCTGAATTTAGAAAATTATCGTCTTGATCGAAAATGTTATCGAGATTCGGAATAACGTTATCAAAGAAGAGAAATAAATTCATCTTATTTCGCTGTTACGCCTCAACTTCAGATTCGTTTGTCTCTTTGCCGTGTTCCTAACATGTATAGGTTATACAACAATTCCATACCGTATAAAACCAAGCGATACTTAGTCGAGTACGAATGCAAAACTCGAAATATCAAGATGGGAATATACAAAAAAATTTAAAAGAATCGGCCCGTGCACGTCGGCGGGCCAAAGTTCAGCGGGAATACGCTGAATTTCACAAGCCATTGTCACGTTTTGAACGTGATAGCGAG ]
[+] EMBL BI515577 [ CAAAGTTTCTTCGTGTTTCATCATTGCGCAAGCATGCCCCTTTGTTCAAGATATGCGTTCGAAAGAGATGATTGAGGATGATTCGAGATTCATTTCAACATCTCCTGATCAAACTGTACCTATGTACTTGGGGACGTTTCATGCGCTCAGAATAAAAGGCACGATGCGTATCCAACGTTTGATTGGACAATCTTCATCTCGAAG AAAAAAAAAAAATAACAAGAAAGATACAAACAAAGAAACAAAAAGTCATCTACGACGATATTCTTTCAAGCTGAATTTAGAAAATTATCGTCTTGATCGAAAATGTTATCGAGATTCGGAATAACGTTATCAAAGAAGAGAAATAAATTCATCTTATTTCGCTGTTACGCCTCAACTTCAGATTCGTTTGTCTCTTTGCCGTGTTCCTAACATGTATAGGTTATACAACAATTCCACACCGTATAAAACCAAGCGATACTTAGTCGAGTACGAATGCAAAACTCGAAATAT ]
[+] EMBL BI507387 [ CTTCGTGTTTCATCATTGCGCAAGCATGCCCCTTTGTTCAAGATACGCGTTCGAAAGAGATGATTGAGGATGATTCGAGATTCATTTCAACATCTCCTGATCAAACTGTACCTATGTACTTGGGGACGTTTCATGCGCTCAGAATAAAAGGCACGATGCGTATCCAACGTTTGATTGGACAATCTTCATCTCGAAGAAAAAAAAAAAAAATAACAAGAAAGATACAAACAAAGAAACAAAAAGTCATCTACGACGATATTCTTTCAAGCTGAATTTAGAAAATTATCGTCTTGATCGAAAATGTTATCGAGATTCGGAATAACGTTATCAAAGAAGAGAAATAAATTCATCTTATTTCGCTGTTACGCCTCAACTTCAGATTCGTTTGTCTCTTTGCCGTGTTCCTAACATGTATAGGTTATACAACAATTCCACACCGTATAAAACCAAGCGATACTTAGTCGAGTACGAATGCAAAACTCGAAATATCAAGATGGGAATATACAAAAAAATTTAAAAGAATCGGCCCGTGCACGTCGGCGGGCCAAAGTTCAGCGGGAATACGCTGAATTTCACAAGCCATTGTCACGT ]
[+] EMBL BI514821 [ GAGATTCATTTCAACATCCCTTGATCAAACTGTACCTATGTACTTGGGGACGTTTCATGCGCTCAGAATAAAAGGCACGATGCGTATCCAACGTTTGATTGGACAATCTTCATCTCGAAG AAAAAAAAAAAATAACAAGAAAGATACAAACAAAGAAACAAAAAGTCATCTACGACGATATTCTTTCAAGCTGAATTTAGAAAATTATCGTCTTGATCGAAAATGTTATCGAGATTCGGAATAACGTTATCAAAGAAGAGAAATAAATTCATCTTATTTCGCTG ]
[-] EMBL BI505891 [ ATTCTTTCAAGCTGAATTTAGAAAATTATCGTCTTGATCGAAAATGTTATCGAGATTCGGAATAACGTTATCAAAGAAGAGAAATAAATTCATCTTATTTCGCTGTTACGCCTCAACTTCAGATTCGTTTGTCTCTTTGCCGTGTTCCTAACATGTATAGGTTATACAACAATTCCACACCGTATAAAACCAAGCGATACTTAGTCGAGTACGAATGCAAAACTCGAAATATCAAGATGGGAATATACAAAAAAATTTAAAAGAATCGGCCCGTGCACGTCGGCGGGCCAAAGTTCAGCGGGAATACGCTGAATTTCACAAGCCATTGTCACGTTTTGAACGTGATAGCGAGACAGTAGTACGTTGCAAAATTGATTAGCAATATTGTTAAAAAATACGGAGGGAGGAGGGGAAGGAGGGGGGAGGGAGGGAGGGAAGGAAAAATAATGGAAAAGAAGAAAATTTTTAACGAAGGAAATAATAATTAACAATTCGAGAGGATCAAGATTTTTCTCGATATTTCAAAGTTTGCGTGTT]
consensusID : consensus_92#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 428 fasta sequence
[AAATAATGTCAGCTTCCGCAGCGCGTTGCCCCCGATGATCGATGATCACTAACTCGTGGCCTCGAGCCTGGAAGAATTCGAGTGCTTTTTCCGCGTCTTTCGCAACTGACACGCTCCATCCCAAACGCCTCGAAGTAGTGGCAAGGATATCCATTTGTTGATCATCTTTGGGGAAGACCAGTAATATCTGAATATGAATAATTGCAATAATCGATAAGATATATATATATCAATTCATGAATGAATTCTAGCATCGATAGATCGTAACTTACTTTTATGAGACTAGGAATACTGTTCGTTAACGGATGGGGTTCAGTATCGTGGGATCCTATCTGAAATCAAATCAACACGCAAACTTTGAAATATCGAGAAAAATCTTGATCCTCTCGAATTGTTAATTATTATTTCCTTCGTTAAAAATTTTCTTC]
[+] EMBL BI513713 [AAATAATGTCAGCTTCCGCAGCGCGTTGCCCCCGATGATCGATGATCACTAACTCGTGGCCTCGAGCCTGGAAGAATTCGAGTGCTTTTTCCGCGTCTTTCGCAACTGACACGCTCCATCCCAAACGCCTCGAAGTAGTGGCAAGGATATCCATTTGTTGATCATCTTTGGGGAAGACCAGTAATATCTGAATATGAATAATTGCAATAATCGATAAGATATATATATATCAATTCATGAATGAATTCTAGCATCGATAGATCGTAACTTACTTTTATGAGACTAGGAATACTGTTCGTTAACGGATGGGGTTCAGTATCGTGGGATCCTATCTGAAATCAAATCAACACGCAAACTTTGAAATATCGAGAAAAATCTTGATCCTCTCGAATTGTTAATTATTATTTCCTTCGTTAAAAATTTTCTTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_92#0 TACAATCGTACAACAACAATTTTTATTGCG-ATTACAATAGATGTGTATACAATATTTAC 59
consensus_92#1 -------AAATAATGTCAGCTTCCGCAGCGCGTTGCCCCCGATG---AT-CGATGATCAC 49
* ** ** ** *** ** * **** ** * ** * **
consensus_92#0 AAATTGGAATATTTTTGCAATTGATCTTTCCATTTAAAATTTTGAATTTATAATTTTCTT 119
consensus_92#1 TAACTCG--TGGCCTCGAGCCTGG-----------AAGAATTCGAGT-----GCTTTTTC 91
** * * * * * ** ** * ** ** * *** *
consensus_92#0 CCCGTTTTTTTTTTTTTTTTTAATGACGATTACGAAAAAGTTTCCCTCTCAACAAAGTTT 179
consensus_92#1 CGCGTCTTTCGCAACTGACACGCT--CCATCCCAAACGCCTCGAAGTAGTGGCAAGGATA 149
* *** *** * * * ** * ** * * *** * *
consensus_92#0 CTTCGTGTTTCATCATTGCGCAAGCATGCCCCTTTGTTCAAGATACGCGTTCGAAAGAGA 239
consensus_92#1 TCCATTTGTTGATCATCTTTGGGGAAGACCAGTAATATCTGAATATGAAT--AATTGCAA 207
* ** ***** * * ** * ** *** * * * * *
consensus_92#0 TGATTGAGGATGATTCGAGATTCATTTCAACATCTCTTGATCAAACTGTACCTATGTACT 299
consensus_92#1 TAATCGATAA-GAT---ATATATATATCAA---TTCATGAATGAATTCTAGC-ATCGAT- 258
* ** ** * *** * ** ** **** ** *** ** * ** * ** *
consensus_92#0 TGGGGACGTTTCATGCGCTCAGAATAAAAGGCACGATGCGTATCCAACGTTTGATTGGAC 359
consensus_92#1 --AGATCGTAACTTACTTTTATGAGACTAGGAATACTGTTCGTTAACGGATGGGGTTCAG 316
* *** * * * * * * * *** * ** * * * * * * *
consensus_92#0 AATCTTCATCTCGAAGAAAAAAAAAAAATAACAAGAAAGATACAAACAAAGAAACAAAAA 419
consensus_92#1 TATCGTGGGATCCTATCTGAAATCAAATCAACACGCAAACTTTGAAATATCGAGAAAAAT 376
*** * ** * *** *** **** * ** * ** * * ****
consensus_92#0 GTCATCTACGACGATATTCTTTCAAGCTGAATTTAGAAAATTATCGTCTTGATCGAAAAT 479
consensus_92#1 CTTG-----------ATCCTCTCGAATTG----TTAATTATTATTTCCTTCGTTAAAAAT 421
* ** ** ** * ** * * ***** *** * *****
consensus_92#0 GTTATCGAGATTCGGAATAACGTTATCAAAGAAGAGAAATAAATTCATCTTATTTCGCTG 539
consensus_92#1 TTTCTTC----------------------------------------------------- 428
** *
consensus_92#0 TTACGCCTCAACTTCAGATTCGTTTGTCTCTTTGCCGTGTTCCTAACATGTATAGGTTAT 599
consensus_92#1 ------------------------------------------------------------
consensus_92#0 ACAACAATTCCACACCGTATAAAACCAAGCGATACTTAGTCGAGTACGAATGCAAAACTC 659
consensus_92#1 ------------------------------------------------------------
consensus_92#0 GAAATATCAAGATGGGAATATACAAAAAAATTTAAAAGAATCGGCCCGTGCACGTCGGCG 719
consensus_92#1 ------------------------------------------------------------
consensus_92#0 GGCCAAAGTTCAGCGGGAATACGCTGAATTTCACAAGCCATTGTCACGTTTTGAACGTGA 779
consensus_92#1 ------------------------------------------------------------
consensus_92#0 TAGCGAGACAGTAGTACGTTGCAAAATTGATTAGCAATATTGTTAAAAAATACGGAGGGA 839
consensus_92#1 ------------------------------------------------------------
consensus_92#0 GGAGGGGAAGGAGGGGGGAGGGAGGGAGGGAAGGAAAAATAATGGAAAAGAAGAAAATTT 899
consensus_92#1 ------------------------------------------------------------
consensus_92#0 TTAACGAAGGAAATAATAATTAACAATTCGAGAGGATCAAGATTTTTCTCGATATTTCAA 959
consensus_92#1 ------------------------------------------------------------
consensus_92#0 AGTTTGCGTGTT 971
consensus_92#1 ------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |