These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_928#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 587 fasta sequence [AAAAGTTAACCTTCATTGTGTAAAAGGAATTAATTTACCATGCAGCAATATAACGTAACTTTTAAATATTAATACGTACGTATGATAACCCCCAAATTGATAATACGATGGCTACAGGAAAACGAAGAGGCATGCATTCATCATCCGGTAGCTCCGCGATGTTCGGATCATCGGCTAGTAATTTAAGGTCGAGTCGTCTAAATTTTCGTCCAAATTCAAGCCAAGAAGACAGAGGCGGAACTCGACCAACAGCTGCTCCAAGCTCCATAGGTCTCATACTTGTAACGATGTTTTTACATGTTTGTAAAAAATCTCTACTCTTTGATACAAGACTCAAAGTTACTATATATTNTGGTNCGATATTTGTAGTATCACTAATAGCAGATTTTATCGCTATGCCAAGAACTTATTTTTCACGTTCAGATAACGCNNTTAATCAATATTTTGTGAAATGGGGATGGGGATGGTTATTGAGTGTAACTGTTCCATGGGTTGCATTAACTGCACATACAATTGGCTGTGGTCGTAGATCAATTCTATTAAAACATCTTGCTAGATTGGGATTAGCTACAATTGCGTGGATATTA] [+] EMBL BI503279 [AAAAGTTAACCTTCATTGTGTAAAAGGAATTAATTTACCATGCAGCAATATAACGTAACTTTTAAATATTAATACGTACGTATGATAACCCCCAAATTGATAATACGATGGCTACAGGAAAACGAAGAGGCATGCATTCATCATCCGGTAGCTCCGCGATGTTCGGATCATCGGCTAGTAATTTAAGGTCGAGTCGTCTAAATTTTCGTCCAAATTCAAGCCAAGAAGACAGAGGCGGAACTCGACCAACAGCTGCTCCAAGCTCCATAGGTCTCATACTTGTAACGATGTTTTTACATGTTTGTAAAAAATCTCTACTCTTTGATACAAGACTCAAAGTTACTATATATTGTGGTGCGATATTTGTAGTATCACTAATAGCAGATTTTATCGCTATGCCAAGAACTTATTTTTCACGTTCAGATAACGCTCTTAATCAATATTTTGTGAAATGGGGATGGGGATGGTTATTGAGTGTAACTGTTCCATGGGTTGCATTAACTGCACATACAATTGGCTGTGGTCGTAGATCAATTCTATTAAAACATCTTGCTAGATTGGGATTAGCTACAATTGCGTGGATATTA] [+] EMBL BI508406 [AAAAGTTAACCTTCATTGTGTAAAAGGAATTAATTTACCATGCAGCAATATAACGTAACTTTTAAATATTAATACGTACGTATGATAACCCCCAAATTGATAATACGATGGCTACAGGAAAACGAAGAGGCATGCATTCATCATCCGGTAGCTCCGCGATGTTCGGATCATCGGCTAGTAATTTAAGGTCGAGTCGTCTAAATTTTCGTCCAAATTCAAGCCAAGAAGACAGAGGCGGAACTCGACCAACAGCTGCTCCAAGCTCCATAGGTCTCATACTTGTAACGATGTTTTTACATGTTTGTAAAAAATCTCTACTCTTTGATACAAGACTCAAAGTTACTATATATTNTGGTNCGATATTTGTAGTATCACTAATAGCAGATTTTATCGCTATGCCAAGAACTTATTTTTCACGTTCAGATAACGCNNTTAATCAATATTTTGTGAAATGGGGATGGGGATGGTTATTGAGTGTAACTGTTCCATGGGTTGCATTAACTG ] consensusID : consensus_928#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 357 fasta sequence [TAAAAGGAATTAATTTACCATGCAGCAATATAACGAAAACGAAGAGGCATGCATTCATCATCCGGTAGCTCCGCGATGTTCGGATCATCGGCTAGTAATTTAAGGTCGAGTCGTCTAAATTTTCGTCCAAATTCAAGCCAAGAAGACAGAGGCGGAACTCGACCAACAGCTGCTCCAAGCTCCATAGGTCTCATACTTGTAACGATGTTTTTACATGTTTGTAAAAAATCTCTACTCTTTGATACAAGACTCAAAGTTACTATATATTGTGGTGCGATATTTGTAGTATCACTAATAGCAGATTTTATCGCTATGCCAAGAACTTATTTTTCACGTTCAGATAACGCTCTTAATCAA] [+] EMBL BI506966 [TAAAAGGAATTAATTTACCATGCAGCAATATAACGAAAACGAAGAGGCATGCATTCATCATCCGGTAGCTCCGCGATGTTCGGATCATCGGCTAGTAATTTAAGGTCGAGTCGTCTAAATTTTCGTCCAAATTCAAGCCAAGAAGACAGAGGCGGAACTCGACCAACAGCTGCTCCAAGCTCCATAGGTCTCATACTTGTAACGATGTTTTTACATGTTTGTAAAAAATCTCTACTCTTTGATACAAGACTCAAAGTTACTATATATTGTGGTGCGATATTTGTAGTATCACTAATAGCAGATTTTATCGCTATGCCAAGAACTTATTTTTCACGTTCAGATAACGCTCTTAATCAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_928#0 AAAAGTTAACCTTCATTGTGTAAAAGGAATTAATTTACCATGCAGCAATATAACGTAACT 60 consensus_928#1 ------------------------------------------------------------ consensus_928#0 TTTAAATATTAATACGTACGTATGATAACCCCCAAATTGATAATACGATGGCTACAGGAA 120 consensus_928#1 -----------------------TAAAAGGAATTAATTTACCATGCAGCAATATAACGAA 37 * ** **** * ** * * *** consensus_928#0 AACGAAGAGGCATGCATTCATCATCCGGTAGCTCCGCGATGTTCGGATCATCGGCTAGTA 180 consensus_928#1 AACGAAGAGGCATGCATTCATCATCCGGTAGCTCCGCGATGTTCGGATCATCGGCTAGTA 97 ************************************************************ consensus_928#0 ATTTAAGGTCGAGTCGTCTAAATTTTCGTCCAAATTCAAGCCAAGAAGACAGAGGCGGAA 240 consensus_928#1 ATTTAAGGTCGAGTCGTCTAAATTTTCGTCCAAATTCAAGCCAAGAAGACAGAGGCGGAA 157 ************************************************************ consensus_928#0 CTCGACCAACAGCTGCTCCAAGCTCCATAGGTCTCATACTTGTAACGATGTTTTTACATG 300 consensus_928#1 CTCGACCAACAGCTGCTCCAAGCTCCATAGGTCTCATACTTGTAACGATGTTTTTACATG 217 ************************************************************ consensus_928#0 TTTGTAAAAAATCTCTACTCTTTGATACAAGACTCAAAGTTACTATATATTNTGGTNCGA 360 consensus_928#1 TTTGTAAAAAATCTCTACTCTTTGATACAAGACTCAAAGTTACTATATATTGTGGTGCGA 277 *************************************************** **** *** consensus_928#0 TATTTGTAGTATCACTAATAGCAGATTTTATCGCTATGCCAAGAACTTATTTTTCACGTT 420 consensus_928#1 TATTTGTAGTATCACTAATAGCAGATTTTATCGCTATGCCAAGAACTTATTTTTCACGTT 337 ************************************************************ consensus_928#0 CAGATAACGCNNTTAATCAATATTTTGTGAAATGGGGATGGGGATGGTTATTGAGTGTAA 480 consensus_928#1 CAGATAACGCTCTTAATCAA---------------------------------------- 357 ********** ******** consensus_928#0 CTGTTCCATGGGTTGCATTAACTGCACATACAATTGGCTGTGGTCGTAGATCAATTCTAT 540 consensus_928#1 ------------------------------------------------------------ consensus_928#0 TAAAACATCTTGCTAGATTGGGATTAGCTACAATTGCGTGGATATTA 587 consensus_928#1 ----------------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |