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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_96#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 980 fasta sequence
[AATCAGTGAAATTTTTGTGAAAATGTTTTCCACTTCTACACTGAGTGTCCTATTAGGGACAATTTTACTTATCTCTTCGATTCCCGATGCAGTATCTTTCAGCAAGTACGGGAGGACGTGCAAGGACATCGGTTGCATGAGGGATGAGGTCTGCGTGATGGCCGAGGATCCTTGTTCGATCTACCAACGAGATAACTGCGGTCGTTATCCGACTTGTATGAAATCTCGTCCAGGCGAGGCTAATTGTGCCAGCACTCTGTGCGNNGAAAACGAATACTGCAAAACCGAGAATGGCGTCCCAACATGTGTGAAGAAATCAGCAGTAAATGATGACGGATTGTTCGCAGAGTTCGATGGAACAAGCAACAGCTTATTGAGAAAAAGACGGGGGACCGGCGATGAAGCGGATTCCACATCGGATGACACGCAATCGGTTAAGACGATGGACTCTCGATACCCATCCGGAAGTGGATATCCGTCCTCCGAAACTCGACCAAAAGCTGACACCTCGGTCAAATCATCCGGTTACCCATCCAGTTCCGGTTATCCATCGAACTCTGGTTATCCCTCCACCGGCTCATCCGGTTATCCATCCAGTTCTGGTTACCCATCCAGATCGTCCGGATATCCTTCAGAATCGGCAAGTTCCGGTTACCCGTCGAGAAGCTCTGGCTATCCTTCAGAGGCTGGATATCCGTCGAGAAGCTCGTCCGGTTACCCATCACAATCTGGATATCCTTCGAGAAGCTCTTCAGGTTATCCATCAGAGTCTGGCTACCCTTCGAGAAGCTCTTATCCGTCAGGATCTAGTTATCCCAGTGGCTCGTATCCTTCATCAGGTTCAAGGGGATATCCATCGACCTCCGTCGATGAGGCAAGTGTGAAGAGGGTGGATGCAAACTCTGTGAATGCTGCTTATCCCAGCCAGGCTGGTAGAAGTAGTTCAGGGTATCCTAGTCAGGGTAGCAGTTATCCGAGTC]
[+] EMBL BI515715 [AATCAGTGAAATTTTTGTGAAAATGTTTTCCACTTCTACACTGAGTGTCCTATTAGGGACAATTTTACTTATCTCTTCGATTCCCGATGCAGTATCTTTCAGCAAGTACGGGAGGACGTGCAAGGACATCGGTTGCATGAGGGATGAGGTCTGCGTGATGGCCGAGGATCCTTGTTCGATCTACCAACGAGATAACTGCGGTCGTTATCCGACTTGTATGAAATCTCGTCCAGGCGAGGCTAATTGTGCCAGCACTCTGTGCGNNGAAAACGAATACTGCAAAACCGAGAATGGCGTCCCAACATGTGTGAAGA ]
[+] EMBL BI516910 [ TGCAAGGACATCGGTTGCATGAGGGATGAGGTCTGCGTGATGGCCGAGGATCCTTGTTCGATCTACCAACGAGATAACTGCGGTCGTTATCCGACTTGTATGAAATCTCGTCCAGGCGAGGCTAATTGTGCCAGCACTCTGTGCGGTGAAAACGAATACTGCAAAACCGAGAATGGCGTCCCAACATGTGTGAAGAAATCAGCAGTAAATGATGACGGATTGTTCGCAGAGTTCGATGGAACAAGCAACAGCTTATTGAGAAAAAGACGGGGGACCGGCGATGAAGCGGATTCCACATCGGATGACACGCAATCGGTTAAGACGATGGACTCTCGATACCCATCCGGAAGTGGATATCCGTCCTCCGAAACTCGACCAAAAGCTGACACCT ]
[+] EMBL BI504564 [ AGAAAAAGACGGGGGACCGGCGATGAAGCGGATTCCACATCGGATGACACGCAATCGGTTAAGACGATGGACTCTCGATACCCATCCGGAAGTGGATATCCGTCCTCCGAAACTCGACCAAAAGCTGACACCTCGGTCAAATCATCCGGTTACCCATCCAGTTCCGGTTATCCATCGAACTCTGGTTATCCCTCCACCGGCTCATCCGGTTATCCATCCAGTTCTGGTTACCCATCCAGATCGTCCGGATATCCTTCAGAATCGGCAAGTTCCGGTTACCCGTCGAGAAGCTCTGGCTATCCTTCAGAGGCTGGATATCCGTCGAGAAGCTCGTCCGGTTATCCATCACAATCTGAATATCCTTCGAAAAGCTCTTCAGGTTATCCATCAGAGTCTGGCTACCCTTCGAGAAGCTCTTATCCATCAGGATCTAGTTATCCCAGTGGCTCATATCCTTCATCAGGTTCAAGGGGATATCCATCGACCTCCGTCGATGAGGCAAGTGTGAAGAGGGTGGATGCAAACTCTGTGAATGCTGCTTATCCCAGCCAGGCTGGTAGAAGTAGTTCAGGGTATCCTAGTCAGGGTAGCAGTTATCCGAGTC]
[+] EMBL BI502994 [ ATGACACGCAATCGGTTAAGACGATGGACTCTCGATACCCATCCGGAAGTGGATATCCGTCCTCCGAAACTCGACCAAAAGCTGACACCTCGGTCAAATCATCCGGTTACCCATCCAGTTCCGGTTATCCATCGAACTCTGGTTATCCCTCCACCGGCTCATCCGGTTATCCATCCAGTTCTGGTTACCCATCCAGATCGTCCGGATATCCTTCAGAATCGGCAAGTTCCGGTTACCCGTCGAGAAGCTCTGGCTATCCTTCAGAGGCTGGATATCCGTCGAGAAGCTCGTCCGGTTACCCATCACAATCTGGATATCCTTCGAGAAGCTCTTCAGGTTATCCATCAGAGTCTGGCTACCCTTCGAGAAGCTCTTATCCGTCAGGATCTAGTTATCCCAGTGGCTCGTATCCTTCATCAGGTTCAAGAGGATATCCATCGACCTCCGTTGATGAGGCAAGTGTGAAGAGGGTGGATGCAAACTCTGTGAATGCTGCTTATCCCAGCCAAGC ]
consensusID : consensus_96#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 522 fasta sequence
[TATCTTTTAGCAAGTACGGGAGGACGTGCAAGGACATCGGTTGCATGAGGGATGAGGTCTGCGTGATGGCCGAGGATCCTTGTTCGATCTACCAACGAGATAACTGCGGTCGTTATCCGACTTGTATGAAATCTCGTCCAGGCGAGGCTAATTGTGCCAGCACTCTGTGCGGTGAAAACGAATACTGCAAAACCGAGAATGGCGTCCCGACATGTGTGAAGAAATCAGCAGTAAATGGATTCGAGTCGGCGGGCGTTTCTTACGTGAACGGGCAGCGGGTGAACACGGACGAGAAGCAGCAGCTCGATAAGACGACGGCCAGCAACAGCGCTAGCAATTCGAACCCTTACGCCAATGCTAATGCGCCACCTGCCCCCGCCGAGCCAGCGGGAGGGTATCGCCATCAAGTGAATTCCGCCACCAATTTGGGTTATCCACCTTATCCTAGCTCCGACACGGAGCGTTCCAAGAGCGGTGGGTATCCATCGTATCCTGCTGGCTCCAGCAACGGGTATCCGCCTT]
[+] EMBL BI513194 [TATCTTTTAGCAAGTACGGGAGGACGTGCAAGGACATCGGTTGCATGAGGGATGAGGTCTGCGTGATGGCCGAGGATCCTTGTTCGATCTACCAACGAGATAACTGCGGTCGTTATCCGACTTGTATGAAATCTCGTCCAGGCGAGGCTAATTGTGCCAGCACTCTGTGCGGTGAAAACGAATACTGCAAAACCGAGAATGGCGTCCCGACATGTGTGAAGAAATCAGCAGTAAATGGATTCGAGTCGGCGGGCGTTTCTTACGTGAACGGGCAGCGGGTGAACACGGACGAGAAGCAGCAGCTCGATAAGACGACGGCCAGCAACAGCGCTAGCAATTCGAACCCTTACGCCAATGCTAATGCGCCACCTGCCCCCGCCGAGCCAGCGGGAGGGTATCGCCATCAAGTGAATTCCGCCACCAATTTGGGTTATCCACCTTATCCTAGCTCCGAC ]
[+] EMBL BI515087 [ ATCGGTTGCATGAGGGATGAGGTCTGCGTGATGGCCGAGGATCCTTGTTCGATCTACCAACGAGATAACTGCGGTCGTTATCCGACTTGTATGAAATCTCGTCCAGGCGAGGCTAATTGTGCCAGCACTCTGTGCGGTGAAAACGAATACTGCAAAACCGAGAATGGCGTCCCGACATGTGTGAAGAAATCAGCAGTAAATGGATTCGAGTCGGCGGGCGTTTCTTACGTGAACGGGCAGCGGGTGAACACGGACGAGAAGCAGCAGCTCGATAAGACGACGGCCAGCAACAGCGCTAGCAATTCGAACCCTTACGCCAATGCTAATGCGCCACCTGCCCCCGCCGAGCCAGCGGGAGGGTATCGCCATCAAGTGAATTCCGCCACCAATTTGGGTTATCCACCTTATCCTAGCTCCGACAC ]
[+] EMBL BI517248 [ TGCATGAGGGATGAGGTCTGCGTGATGGCCGAGGATCCTTGTTCGATCTACCAACGAGATAACTGCGGTCGTTATCCGACTTGTATGAAATCTCGTCCAGGCGAGGCTAATTGTGCCAGCACTCTGTGCGGTGAAAACGAATACTGCAAAACCGAGAATGGCGTCCCAACATGTGTGAAGAAATCAGCAGTAAATGGATTCGAGTCGGCGGGCGTTTCTTACGTGAACGGGCAGCGGGTGAACACGGACGAGAAGCAGCAGCTCGATAAGACGACGGCCAGCAACAGCGCTAGCAATTCGAACCCTTACGCCAATGCTAATGCGCCACCTGCCCCCGCCGAGCCAGCGGGAGGGTATCGCCATCAAGTGAATTCCGCCACCAATTTGGGTTATCCACCTTATCCTAGCTCCGACACGGAGCGTTCCAAGAGCGGTGGGTATCCATCGTATCCTGCTGGCTCCAGCAACGGGTATCCGCCTT]
consensusID : consensus_96#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 518 fasta sequence
[TTGCATGAGGGATGAGGTCTGCGTGATGGCCGAGGATCCTTGTTCGATCTACCAACGAGATAACTGCGGTCGTTATCCGACTTGTATGAAATCTCGTCCAGGCGAGGCTAATTGTGCCAGCACTCTGTGCGGTGAAAACGAATACTGCAAAACCGAGAATGGCGTCCCGACATGTGTGAAGAAATCAGCAGTAAATGAGTTCGATGGAACAAGCAACAGCTTATTGAGAAAAAGACGGGGGACCGGCGATGAAGCGGATTCCACACCGGATGACACGCAATCGGTTAAGACCATGGACTCTCGATACCCATCCGGAAGTGGATATCCATCCTCAGAAACTCGACCAAAAGCTGACACCTCGGTCAAATCATCCGGTTACCCATCCAGTTCCGGTTATCCATCGAACTCTGGTTATCCCTCCACCGGCTCATCCGGTTATCCATCCAGTTCTGGTTACCCATCCAGATCGTCCGGATATCCTTCAGAATCGGCAAGTTCCGGTTACCCGTCGAGAAGCT]
[+] EMBL BI507654 [TTGCATGAGGGATGAGGTCTGCGTGATGGCCGAGGATCCTTGTTCGATCTACCAACGAGATAACTGCGGTCGTTATCCGACTTGTATGAAATCTCGTCCAGGCGAGGCTAATTGTGCCAGCACTCTGTGCGGTGAAAACGAATACTGCAAAACCGAGAATGGCGTCCCGACATGTGTGAAGAAATCAGCAGTAAATGAGTTCGATGGAACAAGCAACAGCTTATTGAGAAAAAGACGGGGGACCGGCGATGAAGCGGATTCCACACCGGATGACACGCAATCGGTTAAGACCATGGACTCTCGATACCCATCCGGAAGTGGATATCCATCCTCAGAAACTCGACCAAAAGCTGACACCTCGGTCAAATCATCCGGTTACCCATCCAGTTCCGGTTATCCATCGAACTCTGGTTATCCCTCCACCGGCTCATCCGGTTATCCATCCAGTTCTGGTTACCCATCCAGATCGTCCGGATATCCTTCAGAATCGGCAAGTTCCGGTTACCCGTCGAGAAGCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_96#0 AATCAGTGAAATTTTTGTGAAAATGTTTTCCACTTCTACACTGAGTGTCCTATTAGGGAC 60
consensus_96#2 ------------------------------------------------------------
consensus_96#1 ------------------------------------------------------------
consensus_96#0 AATTTTACTTATCTCTTCGATTCCCGATGCAGTATCTTTCAGCAAGTACGGGAGGACGTG 120
consensus_96#2 ------------------------------------------------------------
consensus_96#1 --------------------------------TATCTTTTAGCAAGTACGGGAGGACGTG 28
consensus_96#0 CAAGGACATCGGTTGCATGAGGGATGAGGTCTGCGTGATGGCCGAGGATCCTTGTTCGAT 180
consensus_96#2 ------------TTGCATGAGGGATGAGGTCTGCGTGATGGCCGAGGATCCTTGTTCGAT 48
consensus_96#1 CAAGGACATCGGTTGCATGAGGGATGAGGTCTGCGTGATGGCCGAGGATCCTTGTTCGAT 88
************************************************
consensus_96#0 CTACCAACGAGATAACTGCGGTCGTTATCCGACTTGTATGAAATCTCGTCCAGGCGAGGC 240
consensus_96#2 CTACCAACGAGATAACTGCGGTCGTTATCCGACTTGTATGAAATCTCGTCCAGGCGAGGC 108
consensus_96#1 CTACCAACGAGATAACTGCGGTCGTTATCCGACTTGTATGAAATCTCGTCCAGGCGAGGC 148
************************************************************
consensus_96#0 TAATTGTGCCAGCACTCTGTGCGNNGAAAACGAATACTGCAAAACCGAGAATGGCGTCCC 300
consensus_96#2 TAATTGTGCCAGCACTCTGTGCGGTGAAAACGAATACTGCAAAACCGAGAATGGCGTCCC 168
consensus_96#1 TAATTGTGCCAGCACTCTGTGCGGTGAAAACGAATACTGCAAAACCGAGAATGGCGTCCC 208
*********************** ***********************************
consensus_96#0 AACATGTGTGAAGAAATCAGCAGTAAATGATGACGGATTGTTCGCAGAGTTCGATGGAAC 360
consensus_96#2 GACATGTGTGAAGAAATCAGCAGTAAATGA------------------GTTCGATGGAAC 210
consensus_96#1 GACATGTGTGAAGAAATCAGCAGTAAATGG------------------ATTCGAGTCGGC 250
**************************** ***** *
consensus_96#0 AAGCAACAGCTTATTGAGAAAAAGACGGGGGACCGGCGATGA--AGCGGATTCCACATCG 418
consensus_96#2 AAGCAACAGCTTATTGAGAAAAAGACGGGGGACCGGCGATGA--AGCGGATTCCACACCG 268
consensus_96#1 GGGCGTTTCTTACGTGAACGGGCAGCGGGTGAACACGGACGAGAAGCAGCAGCTCGATAA 310
** * *** **** ** * ** ** *** * * *
consensus_96#0 GATGACAC---GCAATCG-GTTAAGACGATGGACTCTCGATACCCATCCGGAAGTGGATA 474
consensus_96#2 GATGACAC---GCAATCG-GTTAAGACCATGGACTCTCGATACCCATCCGGAAGTGGATA 324
consensus_96#1 GACGACGGCCAGCAACAGCGCTAGCAATTCGAACCCTT-ACGCCAATGCTAATGCGC-CA 368
** *** **** * * ** * * ** ** * ** ** * * * * *
consensus_96#0 TCCGTCCTCCGAAACTCGACCAAAAGCTGACACCTCGGTCAAATCATCCGGTTACCCATC 534
consensus_96#2 TCCATCCTCAGAAACTCGACCAAAAGCTGACACCTCGGTCAAATCATCCGGTTACCCATC 384
consensus_96#1 CCTGCCCCCGCCGAGCCAGCGGGAGGGTATCGCC---ATCAAGTGA----ATTCCGCCAC 421
* ** * * * * * * * * ** **** * * ** * * *
consensus_96#0 CAGTTCCGGTTATCCATCGAACTCTGGTTATCCCTCCACCGGCTCATCCGGTTATCCATC 594
consensus_96#2 CAGTTCCGGTTATCCATCGAACTCTGGTTATCCCTCCACCGGCTCATCCGGTTATCCATC 444
consensus_96#1 CAATTTGGGTTATCCACC---------TTATCCTAGCTCCGACACG---GAGCGTTCCAA 469
** ** ********* * ****** * *** * * * * *
consensus_96#0 CAGTTCTGGTTACCCATCCAGATCGTCCGGATATCCTTCAGAATCGGCAAGTTCCGGTTA 654
consensus_96#2 CAGTTCTGGTTACCCATCCAGATCGTCCGGATATCCTTCAGAATCGGCAAGTTCCGGTTA 504
consensus_96#1 GAGCGGTGGGTATCCATCGTATCCTGCTGG-----CTCCAGCAACGGGTA--TCCGCCTT 522
** *** ** ***** * * ** ** *** * *** * **** *
consensus_96#0 CCCGTCGAGAAGCTCTGGCTATCCTTCAGAGGCTGGATATCCGTCGAGAAGCTCGTCCGG 714
consensus_96#2 CCCGTCGAGAAGCT---------------------------------------------- 518
consensus_96#1 ------------------------------------------------------------
consensus_96#0 TTACCCATCACAATCTGGATATCCTTCGAGAAGCTCTTCAGGTTATCCATCAGAGTCTGG 774
consensus_96#2 ------------------------------------------------------------
consensus_96#1 ------------------------------------------------------------
consensus_96#0 CTACCCTTCGAGAAGCTCTTATCCGTCAGGATCTAGTTATCCCAGTGGCTCGTATCCTTC 834
consensus_96#2 ------------------------------------------------------------
consensus_96#1 ------------------------------------------------------------
consensus_96#0 ATCAGGTTCAAGGGGATATCCATCGACCTCCGTCGATGAGGCAAGTGTGAAGAGGGTGGA 894
consensus_96#2 ------------------------------------------------------------
consensus_96#1 ------------------------------------------------------------
consensus_96#0 TGCAAACTCTGTGAATGCTGCTTATCCCAGCCAGGCTGGTAGAAGTAGTTCAGGGTATCC 954
consensus_96#2 ------------------------------------------------------------
consensus_96#1 ------------------------------------------------------------
consensus_96#0 TAGTCAGGGTAGCAGTTATCCGAGTC 980
consensus_96#2 --------------------------
consensus_96#1 --------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |