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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_967#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 652 fasta sequence
[TTTATTTCTAATCGTGAACAACCAAAGAGAAAAAATATTTGATAATGATTGAAAGCCGATTCACACTGCGACACGTCGAGTCTCGGCAATACACGCTAAAAAACATCTATATAGAGAAGGATTTAATATATTGAATCTATTTATAA-ATATATATATTCCTGTTATAATAATATTTGTATGCTACAATAAGAGGCTCCTATATGAATATTATTATAATTCACATTCTATACATATACATATATTAATACTATTAATTATATTATATTTATATTATATATTATATGTGTATAATAATATTAATATATTGTCAAATATATAAATATTTATGATCAATCAACGACATGATACGACAATTGCATTTTAATATTGCCGCCTAGTGGGGATCGGCTTTATATTTTCGCAAAAGAATTATTTTTCTTTTGCATAAGAACTTATTTTTTAATATTTCAATCAAAGATATAAATATCACGAATACTTTTATAAATCGAAAATGAATAGTGCAAAATTGAAATCGGGCATTCTACAATGTTGTGTATTCAAATAAAAAAAATTATATATTTCCAAGGCAATTATCCTTGGAAACAAATACTTACTTGGAAGAAGTAAATGACGGATAATTTTATTTGCTCTAAGCAAAATTGTTGTGTAAAAG]
[+] EMBL BI509980 [TTTATTTCTAATCGTGAACAACCAAAGAGAAAAAATATTTGATAATGATTGAAAGCCGATTCACACTGCGACACGTCGAGTCTCGGCAATACACGCTAAAAAACATCTATATAGAGAAGGATTTAATATATTGAATCTATTTATAATATATATATATTCCTGTTATAATAATATTTGTATGCTACAATAAGAGGCTCCTATATGAATATTATTATAATTCACATTCTATACATATACATATATTAATACTATTAATTATATTATATTTATATTATATATTATATGTGTATAATAATATTAATATATTGTCAAATATATAAATATTTATGATCCATCAACGACATGATACGACAATTGCATTTTAATATTGCCGCCTAGTGGGGATCGGCTTTATATTTTCGCAAAAGAATTATTTTTCTTTTGCATAAGAACTTATTTTTTAATATTTCAATCAAAGATATAAATATCACGAATACTTTTATAAATCGAAAATGAATAGTGCAAAATTGAAATCGGGCATTCTACAATGTTGTGTATTCAAATAAAAAAAATTATATATTTCCAAGGCAATTATCCTTGGAAACAAATACTTACTTGGAAGAAGTAAATGACGGATAATTTTATTTGCTCTAAGCAAAATTGTTGTGTAAAAG]
[+] EMBL BI503164 [ CGTCGAGTCTCGGCAATACACGCTAAAAAACATCTATATAGAGAAGGATTTAATATATTGAATCTATTTAT A ATATATATATTCCTGTTATAATAATATTTGTATGCTACAATAAGAGGCTCCTATATGAATATTATTATAATTCACATTCTATACATATACATATATTAATACTATTAATTATATTATATTTATATTATATATTATATGTGTATAATAATATTAATATATTGTCAAATATATAAATATTTATGATCAATCAACGACATGATACGACAATTGCATTTTAATATTGCCGCCTAGTGGGGATCGGCTTTATATTTTCGCAAAAGAATTATTTTTCTTTTGCATAAGAACTTATTTTTTAATATTTCAATCAAAGATATAAATATCACGAATACTTTTATAAATCGAAAATGAATAGTGCAAAATTGAAATCGGGCATTCTACAATGTTGTGTATTCAAAT AAAAAAATTATATATTTCCAAGGCAATTATCCTTGGAAACAAATACTTACTTGGAAGAAGTAAATGACGGAT ]
consensusID : consensus_967#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 368 fasta sequence
[TTTTTTTTTTTTTTTTTTTTTTTTTATTAAATGTTTTTATTATTAAGAGGGAATTTCGGAGTACACAAGACTATCTAGTGAAGTCGATTTGGAACATGGGTGGTCTGCTAGAAACAAAAATACCACGCATCATAATGACCACACTAGATCGCTCTTCGTTTATTGCACATCACACACCGTTCGAAAACCGTTTACATTAAAGGGTGTACACAGCGCACGAATACTTTTATAAATCGAAAATGAATAGTGCAAAATTGAAATCGNNNNTTCTACAATGTTGTGTATTCAAATAAAAAAATTATATATTTCCAAGGCAATTATCCTTGGAAACAAATACTTACTTGGAAGAAGTAAATGACGGATAATTT]
[-] EMBL BI509357 [TTTTTTTTTTTTTTTTTTTTTTTTTATTAAATGTTTTTATTATTAAGAGGGAATTTCGGAGTACACAAGACTATCTAGTGAAGTCGATTTGGAACATGGGTGGTCTGCTAGAAACAAAAATACCACGCATCATAATGACCACACTAGATCGCTCTTCGTTTATTGCACATCACACACCGTTCGAAAACCGTTTACATTAAAGGGTGTACACAGCGCACGAATACTTTTATAAATCGAAAATGAATAGTGCAAAATTGAAATCGNNNNTTCTACAATGTTGTGTATTCAAATAAAAAAATTATATATTTCCAAGGCAATTATCCTTGGAAACAAATACTTACTTGGAAGAAGTAAATGACGGATAATTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_967#0 TTTATTTCTAATCGTGAACAACCAAAGAGAAAAAATATTTGATAATGATTGAAAGCCGAT 60
consensus_967#1 ------------------------------------------------------------
consensus_967#0 TCACACTGCGACACGTCGAGTCTCGGCAATACACGCTAAAAAACATCTATATAGAGAAGG 120
consensus_967#1 ------------------------------------------------------------
consensus_967#0 ATTTAATATATTGAATCTATTTATAAATATATATATTCCTGTTATAATAATATTTGTATG 180
consensus_967#1 ------------------------------------------------------------
consensus_967#0 CTACAATAAGAGGCTCCTATATGAATATTATTATAATTCACATTCTATACATATACATAT 240
consensus_967#1 ------------------------------------------------------------
consensus_967#0 ATTAATACTATTAATTATATTATATTTATATTATATATTATATGTGTATAATAATATTAA 300
consensus_967#1 -----------TTTTTTTTTTTTTTTTTTTTTTTTTATTAAATGTTTTTATTATTAAGAG 49
* ** * ** * *** * ** * ***** **** * ** ** ** *
consensus_967#0 TATATTGTCAAATATATAAATATTTATGATCAATCAACGACATGATACGACAATTGCATT 360
consensus_967#1 GGAATTTCGGAGTACACAAGACTATCTAGTGAA--GTCGATTTGGAACATGGGTGGTCTG 107
*** * ** * ** * * * * ** *** ** ** * * *
consensus_967#0 TTAATATTGCCGCCTAGTGGGGATCGGCTTTATATTTTCGCAAAAGAATTATTTTTCTTT 420
consensus_967#1 CTAGAAACAA-AAATACCACGCATCA---TAATGACCACACTAGATCGCTCTTCGTTTAT 163
** * ** * *** * ** * * * * * ** * * *
consensus_967#0 TGCATAAGAACTTATTTTTTAATA----TTTCAATCAAAGATATAAATATC--ACGAATA 474
consensus_967#1 TGCACATCACACACCGTTCGAAAACCGTTTACATTAAAGGGTGTACACAGCGCACGAATA 223
**** * * ** ** * ** ** * ** * * ** * * * *******
consensus_967#0 CTTTTATAAATCGAAAATGAATAGTGCAAAATTGAAATCGGGCATTCTACAATGTTGTGT 534
consensus_967#1 CTTTTATAAATCGAAAATGAATAGTGCAAAATTGAAATCGNNNNTTCTACAATGTTGTGT 283
**************************************** ****************
consensus_967#0 ATTCAAATAAAAAAAATTATATATTTCCAAGGCAATTATCCTTGGAAACAAATACTTACT 594
consensus_967#1 ATTCAAATAAAAAAA-TTATATATTTCCAAGGCAATTATCCTTGGAAACAAATACTTACT 342
*************** ********************************************
consensus_967#0 TGGAAGAAGTAAATGACGGATAATTTTATTTGCTCTAAGCAAAATTGTTGTGTAAAAG 652
consensus_967#1 TGGAAGAAGTAAATGACGGATAATTT-------------------------------- 368
**************************
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |