These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_982#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 662 fasta sequence [AAAATGTACCTAGAACCTATTCTACGCTCTCCCTCGTCCTTATTCCTTTTAAAAAAATGCGCCCTTTTCCTCCCCCGTCCAAGCATATCTTCCCCTTCTTCCCCCCTCCCCAGTCCCGAAAAAAAAGTAATTGTCTCGCNGNTTCAGATTTCTTCTGTGCGATTCTAATCTTGATATAACACTTGAAGTCAATTACACGATTAATTAATCCAAAGGTGTATACATTATAACTATATATTTGATTCTAATAGAGAGAGATATACGCTCGTATGTTTTTCCTTGCGAATTTTTCGATAATATAAATATAATAATAATAACGAGACACAAATAAGTTGAATTGAATAATATTCTAATAGTTACTATACGGAGTGTGTTGAGTCATTGTCCGCGTCATCCGCGTTTCGATGTTAAAGAAGTGGCATGAGTTTCGGTGCAACATCCAAGCGAAATCATATTCGCGATCGAGAATTAGAGAAGGAAAGCGATCAATTGGGCGACAAAGAAATGAAACCCCGACAATTCCAGAAACAGATTGAAACTTGCAACACAGGAACACAACAGTGTATAGCGTTAAAAACAATAGACTGTTTCCCCATTTCCTTGCGCTCTCTTTAACTATTTTCTCTGTCTGTNCTCCTCTCTGTTTCGATCTCTCTCTCTCT] [+] EMBL BI505835 [AAAATGTACCTAGAACCTATTCTACGCTCTCCCTCGTCCTTATTCCTTTTAAAAAAATGCGCCCTTTTCCTCCCCCGTCCAAGCATATCTTCCCCTTCTTCCCCCCTCCCCAGTCCCGAAAAAAAAGTAATTGTCTCGCAGATTCAGATTTCTTCTGTGCGATTCTAATCTTGATATAACACTTGAAGTCAATTACACGATTAATTAATCCAAAGGTGTATACATTATAACTATATATTTGATTCTAATAGAGAGAGATATACGCTCGTATGTTTTTCCTTGCGAATTTTTCGATAATATAAATATAATAATAATAACGAGACACAAATAAGTTGAATTGAATAATATTCTAATAGTTACTATACGGAGTGTGTTGAGTCATTGTCCGCGTCATCCGCGTTTCGATGTTAAAGAAGTGGCATGAGTTTCGGTGCAACATCCAAGCGAAATCATATTCGCGATCGAGAATTAGAGAAGGAAAGCGATCAATTGGGCGACAAAGAAATGAAACCCCGACAATTCCAGAAACAGATTGAAACTTGCAACACAGGAACACAACAGTGTATAGCGTTAAAAACAATAGACTGTTTCCCCATTTC ] [+] EMBL BI511361 [ TCTCGCNGNTTCAGATTTCTTCTGTGCGATTCTAATCTTGATATAACACTTGAAGTCAATTACACGATTAATTAATCCAAAGGTGTATACATTATAACTATATATTTGATTCTAATAGAGAGAGATATACGCTCGTATGTTTTTCCTTGCGAATTTTTCGATAATATAAATATAATAATAATAACGAGACACAAATAAGTTGAATTGAATAATATTCTAATAGTTACTATACGGAGTGTGTTGAGTCATTGTCCGCGTCATCCGCGTTTCGATGTTAAAGAAGTGGCATGAGTTTCGGTGCAACATCCAAGCGAAATCATATTCGCGATCGAGAATTAGAGAAGGAAAGCGATCAATTGGGCGACAAAGAAATGAAACCCCGACAATTTCAGAAACAGATTGAAACTTGCAACACAGGAACACAACAGTGTATAGCGTTAAAAACAATAGACTGTTTCCCCATTTCCTTGCGCTCTCTTTAACTATTTTCTCTGTCTGTNCTCCTCTCTGTTTCGATCTCTCTCTCTCT] consensusID : consensus_982#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 584 fasta sequence [GACGGGGGAGGAAAAGGGCGCATTTTTTTAAAAGGAATAAGGACGAGGGAGAGCGTAGAATAGGTTCTAGGTACATTTTAAAGCGTTTTTACAATCTAAAGAGATCGTTTACGGAGAGAAAGAATGCGAGTCTCTCCGCGGATCTTCGAAAATCATCGCGATATGTCATCACACTCTATTCTCATTGGACTTTCTTCTTTGTTACTTTCGAGTAGCAAAATAACGGCGTTCTCTAGTTTTTTTTTGATCTCTGTTACTTTTTTTCTCCTCCCCCCCTTTTTTCTTTATAAGTCGACTGATCTTCGAAGATCTTACGCGCGATAAGAGAAGATCCAACCAACGACATCGACATCGACAGACAAGAGAGAGAGAGAGAGAGAGACAGTTTGCATGCACGTTGAGACACGAAAGAGAGAGACAGAGAGAAGACAGACAGAGAGAAAGATAGAGAAAGAGACAGAGATATATATATAAAAAGAAAGAGAGATTATGTCAAGTAGATTCAGATGCGAAGCACGTCCACTTCGCTTTCTTNNTCTTCTTCCATTTCTTTTTAATCGCCTCGTTCGATAGAAATTTATATA] [+] EMBL BI503129 [GACGGGGGAGGAAAAGGGCGCATTTTTTTAAAAGGAATAAGGACGAGGGAGAGCGTAGAATAGGTTCTAGGTACATTTTAAAGCGTTTTTACAATCTAAAGAGATCGTTTACGGAGAGAAAGAATGCGAGTCTCTCCGCGGATCTTCGAAAATCATCGCGATATGTCATCACACTCTATTCTCATTGGACTTTCTTCTTTGTTACTTTCGAGTAGCAAAATAACGGCGTTCTCTAGTTTTTTTTTGATCTCTGTTACTTTTTTTCTCCTCCCCCCCTTTTTTCTTTATAAGTCGACTGATCTTCGAAGATCTTACGCGCGATAAGAGAAGATCCAACCAACGACATCGACATCGACAGACAAGAGAGAGAGAGAGAGAGAGACAGTTTGCATGCACGTTGAGACACGAAAGAGAGAGACAGAGAGAAGACAGACAGAGAGAAAGATAGAGAAAGAGACAGAGATATATATATAAAAAGAAAGAGAGATTATGTCAAGTAGATTCAGATGCGAAGCACGTCCACTTCGCTTTCTTNNTCTTCTTCCATTTCTTTTTAATCGCCTCGTTCGATAGAAATTTATATA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_982#0 AAAATGTACCTAGAACCTATTCTACGCTCTCCCTCGTCCTTATTCCTTTTAAAAAAATGC 60 consensus_982#1 ------GACGGGGGAGGAAAAGGGCGCATTTTTTTAAAAGGAATAAGGACGAGGGAGAGC 54 ** * * * *** * * * * * * ** consensus_982#0 GCCCTTTTCCTCCCCCGTCCAAGCATATCTTCCCCTTCTTCCCCCCTCCCCAGTCCCGAA 120 consensus_982#1 GTAGAATAGGT------TCTAGGTACATTTTAAAGCGTTTTTAC-------AATCTAAAG 101 * * * ** * * * ** ** ** * * ** * consensus_982#0 AAAAAAGTAATTGTCTCGCNGNTTCAGATTTCTTCTGTGCGATTCTAATCTTGATATAAC 180 consensus_982#1 AGATCGTTTACGGAGAGAAAGAATGCGAGTCTCTCCGCG-------GATCTTCGAAAATC 154 * * * * * * * ** * ** * * ***** * * * consensus_982#0 ACTTGAAGTCAATTACACGATTAATTAATCCAAAGGTGTATACATTATAACTATATATTT 240 consensus_982#1 ATCGCGATATGTCATCACACTCTATTCTCATTGGACTTTCTTCTTTGTTACT-------- 206 * * *** * *** * * * * ** * *** consensus_982#0 GATTCTAATAGAGAGAGATATACGCTCGTATGTTTTTCCTTGCGAATTTTTCGATAATAT 300 consensus_982#1 --TTCGAGTAGCAAAATAACGGCGTTCTCTAGTTTTTTTTTGA----TCTCTGTTACTTT 260 *** * *** * * * ** ** ****** *** * * * ** * * consensus_982#0 AAATATAATAATAATAACGAGACACAAATAAGTTGAATTGAATAATATTCTAATAGTTAC 360 consensus_982#1 TTTTCTCCTCCCCCCCTTTTTTCTTTA------TAAGTCGACTGATCTTCGA--AGATCT 312 * * * * * * * * ** * ** *** * ** * consensus_982#0 TATACGGAGTGTGTTGAGTCATTGTCCGCGTCATCCGCGTTTCGATGTTAAAGAAGTGGC 420 consensus_982#1 TACGCGCGATAAGAGAAGATCCAACCAACGACATCGACATCGACAGACAAGAGAGAGAGA 372 ** ** * * ** * ** **** * * * * *** * consensus_982#0 ATGAGTTTCGGTGCAACATCCAAGCGAAATCATATTCGCGATCGAGAATTAGAGAAGGAA 480 consensus_982#1 GAGAGA---GAGACAGTTTGCATGCACGTTGAGACACGAAAGAGAGAGACAGAGA-GAAG 428 *** * ** * ** ** * * * ** * **** ***** * * consensus_982#0 AGCGATCAATTGGGCGACAAAGAAATGAAACCCCGACAATTCCAGAAACAGATTGAAAC- 539 consensus_982#1 ACAGACAGAGAGAAAGATAGAGAAA-GAGACAGAGATATATATATAAAAAGAAAGAGAGA 487 * ** * * ** * ***** ** ** ** * * * *** *** ** * consensus_982#0 TTGCAACACAGGAACACAACAGTGTATAGCGTTAAAAACAATAGACTGTTTCCCCATTTC 599 consensus_982#1 TTATGTCAAGTAGATTCAGATGCGAAGCACGTC-----CACTTCGCT--TTCTTNNTCTT 540 ** ** * ** * * * *** ** * ** *** * * consensus_982#0 CTTGCGCTCTCTTTAACTATTTTCTCTGTCTGTNCTCCTCTCTGTTTCGATCTCTCTCTC 659 consensus_982#1 CTTCCATTTCTTTTTA--ATCGCCTCGTTCGATAGAAATTTATATA-------------- 584 *** * * *** * ** *** ** * * * * * consensus_982#0 TCT 662 consensus_982#1 --- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |