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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10001#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2366 fasta sequence
[ACCCCCTCTGGGGGACCTCTGAATACTTCGATCAGAGTAACGGTGCGGTGCCAAACTGATCAGATCACACACTTCAGACTACAGTCAAACAGAGCCCTTGCTTGCTTTGCTTGTGTCTTCAACTTCAGAGACCCCCTCCTACCCTCAAAAAATTTCCCCTTTCTTTTCCTCCGTTTCTTGCAGCGACAAGAGAAATACTAATACTCCTCCTCCTACTACTGCTACTGTGCAAGGGGAAGGACACGACGACGAATTGGAGAGCGGCGTCCTCTCTGATCCTTTTTTTTCCTTTATTGCA------TCTCTCTCTCTCTCTCGCCATTTTTCTTCTAGGTTGGTCTCTGGATCAGGCCATTGAGGGGGAAAGAAAAGGTGCGGGTTTTGGGGGGAGGTTGTTCTTGCGGGAGGCCGTTGATTTCGCCGTGTGATCGGAGGGAGTGAAAAGGAGATGAATGAGAAGGACGCCACTGATTTGGAGGAGAGGAGTGAGGCCAGTGAGCACGGCCAAGCTCTGAGTTTCCATGGTGGTGCCATGTTCTTGCAAGAGGCTCAGATTGCTTCTCCTGCAGCTGCAAATAATGCATTGACCTCCATGGCGAATCCTTTCCCTATCCCTCCTGGGTTGTGGAATCCACCTTCACACAACATGGGTTTAGGCGAAACCAGTTTTTCATCCTTGTTGGGGATGCTGTCGGCCGGCGCGCCGCCACCGTTTGTGGCTACTCCCGGGTTTGTAGATTCCACGGCGGGGTTTCCTTGCTACAATGGNAGGC-ATCTTGGAGCCATGATCAATCACCCTTTCCCTGGTATCCACCAGCCTTTGGGTGATTTCCAAAACGGCGTCGAGCCATGTAGGGAGATTGAGGATATTGAGATTGAAGGATCCAAGAATGTGTCACAAACTGGTGAGAAGCAGCAAGGGGATGGTGAGACAACGCATGCCGTCGATTCCTCCTCCAAGGAGCTAAGCATGCCAGGGCGCAATGGTGGCGCTGGCCATGATGAGGGGACTAGGGTGTCTTGTTCCAAGAAGAGGAAAAGATCAGGACAGGATGGTGGGGTGAAGCATGCAGAAGGTGGTGAGCAATTAGCAACTGTCGGTTCAGCGCAGAAGAATGAGGATGATGAAAAGGGTGAACCAGAGAGGTCTTCTGTGGCGTCCGGGAAATCCAGTGGGAAGCAAATAAAGGATAATGCAGGTTCACCAAAGGAAGACTATATACATGTAAGAGCACGGCGCGGTCAGGCTACAAACAGCCATAGTCTTGCCGAAAGGGTTAGGAGGGAGAAGATCAGTGAAAGGATGAAATATCTTCAGGATCTTGTTCCTGGTTGTAGTAAAGTAACTGGTAAGGCTGTTATGCTGGATGAGATAATTAACTATGTTCAATCATTACAGAGGCAGGTTGAGTTTTTGTCGATGAAGCTAGCAAGTGTCAATCCAACACTGGACTTCAACATAGAACGCATTTTATCTAAAGATATTTTTCAATGTCGAGGCACTACTGCATCATCTGCCTTTGGCTTCTTCCCAGACATTGTTCATCCCCGATTACACCCACCAAAATATACACAAGTTGGGATGCCCAGCATTGTGAACCCCACTGATGCATTTGGAAGAGTAATCCATGCTCCATTAGGAACTAACAGTGCATTCAAAGAACCTAAACATCAGATGCCCAACAATTTGAATGGAGAGTTCCAGGACGTCATTGAGATGCCTTTTACTCATGACCATCATGGATCAAATGATCAACCCTGAGATTGATTCCACAACTGAAGCAAGAGATCAATATGTGCCATGGGCTTTCAGCAAAACTGTGATATATGAGCATGTTGATATCATGGTACTAGCTCACAGCTGATCACTGAAGTATAAGCATCCAAAATGCTTAGTTAGTGCTATTTTTCTCATGTTCATAGCAGCAATTGACCTCCTGTGGAAGCCTCTCTTTGGATGTTCCATTTGCTGTTATAGAAAGTTGGGAGATAAAAAAAAAAGGATGTTCACATGGAGATCTCAAGCAATTTGTTCTCCACTGAAGTAGTCTACAGTCTTGAAATGGCGAGAAGCTTCATTTTGCAAGAAGGTGATTTTTCTGTGGTCTCGTCAACCCCAGGATTATTACATACACTAGCTAGCATTGTGAGGCTACAGAAATTGTTCTTTGTTGTACTTGCTTAGCCCATGTTCCATCTGACAAGCAACATAGGCAGAAATGCAGTCACTGATTTTGTATTTGTTGAAAAAAAAAATAAATGGGCTTGGCCTGATGTAGCAAGCATTTGAATTTTGCAACGGGTGCATATTGGCACAGATGTTTTTATTCCAGCAAAGCTGTGAATTCTGAAAGAGAAGAAAAGAGAGG]
[+] EMBL CB620969 [ACCCCCTCTGGGGGACCTCTGAATACTTCGATCAGAGTAACGGTGCGGTGCCAAACTGATCAGATCACACACTTCAGACTACAGTCAAACAGAGCCCTTGCTTGCTTTGCTTGTGTCTTCAACTTCAGAGACCCCCTCCTACCCTCAAAAAATTTCCCCTTTCTTTTCCTCCGTTTCTTGCAGCGACAAGAGAAATACTAATACTCCTCCTCCTACTACTGCTACTGTGCAAGGGGAAGGACACGACGACGAATTGGAGAGCGGCGTCCTCTCTGATCCTTTTTTTTCCTTTATTGCATCTCTCTCTCTCTCTCTCTCTCGCCATTTTTCTTCTAGGTTGGTCTCTGGATCAGGCCATTGAGGGGGAAAGAAAAGGTGCGGGTTTTGGGGGGAGGTTGTTCTTGCGGGAGGCCGTTGATTTCGCCGTGTGATCGGAGGGAGTGAAAAGGAGATGAATGAGAAGGACGCCACTGATTTGGAGGAGAGGAGTGAGGCCAGTGAGCACGGCCAAGCTCTGAGTTTCCATGGTGGTGCCATGTTCTTGCAAGAGGCTCAGATTGCTTCTCCTGCAGCTGCAAATAATGCATTGACCTCCATGGCGAATCCTTTCCCTATCCCTCCTGGGTTGTGGAATCCACCTTCACACAACATGGGTTTAGGCGAAACCAGTTTTTCATCCTTGTTGGGGATGCTGTCGGCCGGCGCGCCGCCACCGTTTGTGGCTACTCCCGGGTTTGTAGATTCCACGGCGGGGTTTCCTTGCTACAATGGNAGGC ATCTTGGAGCC ]
[+] EMBL AK103853 [ CAGATCACACACTTCAGACTACAGTCAAACAGAGCCCTTGCTTGCTTTGCTTGTGTCTTCAACTTCAGAGACCCCCTCCTACCCTCAAAAAATTTCCCCTTTCTTTTCCTCCGTTTCTTGCAGCGACAAGAGAAATACTAATACTCCTCCTCCTACTACTGCTACTGTGCAAGGGGAAGGACACGACGACGAATTGGAGAGCGGCGTCCTCTCTGATCCTTTTTTTTCCTTTATTGCA TCTCTCTCTCTCTCTCGCCATTTTTCTTCTAGGTTGGTCTCTGGATCAGGCCATTGAGGGGGAAAGAAAAGGTGCGGGTTTTGGGGGGAGGTTGTTCTTGCGGGAGGCCGTTGATTTCGCCGTGTGATCGGAGGGAGTGAAAAGGAGATGAATGAGAAGGACGCCACTGATTTGGAGGAGAGGAGTGAGGCCAGTGAGCACGGCCAAGCTCTGAGTTTCCATGGTGGTGCCATGTTCTTGCAAGAGGCTCAGATTGCTTCTCCTGCAGCTGCAAATAATGCATTGACCTCCATGGCGAATCCTTTCCCTATCCCTCCTGGGTTGTGGAATCCACCTTCACACAACATGGGTTTAGGCGAAACCAGTTTTTCATCCTTGTTGGGGATGCTGTCGGCCGGCGCGCCGCCACCGTTTGTGGCTACTCCCGGGTTTGTAGATTCCACGGCGGGGTTTCCTTGCTACAATGG AGGCAATCTTGGAGCCATGATCAATCACCCTTTCCCTGGTATCCACCAGCCTTTGGGTGATTTCCAAAACGGCGTCGAGCCATGTAGGGAGATTGAGGATATTGAGATTGAAGGATCCAAGAATGTGTCACAAACTGGTGAGAAGCAGCAAGGGGATGGTGAGACAACGCATGCCGTCGATTCCTCCTCCAAGGAGCTAAGCATGCCAGGGCGCAATGGTGGCGCTGGCCATGATGAGGGGACTAGGGTGTCTTGTTCCAAGAAGAGGAAAAGATCAGGACAGGATGGTGGGGTGAAGCATGCAGAAGGTGGTGAGCAATTAGCAACTGTCGGTTCAGCGCAGAAGAATGAGGATGATGAAAAGGGTGAACCAGAGAGGTCTTCTGTGGCGTCCGGGAAATCCAGTGGGAAGCAAATAAAGGATAATGCAGGTTCACCAAAGGAAGACTATATACATGTAAGAGCACGGCGCGGTCAGGCTACAAACAGCCATAGTCTTGCCGAAAGGGTTAGGAGGGAGAAGATCAGTGAAAGGATGAAATATCTTCAGGATCTTGTTCCTGGTTGTAGTAAAGTAACTGGTAAGGCTGTTATGCTGGATGAGATAATTAACTATGTTCAATCATTACAGAGGCAGGTTGAGTTTTTGTCGATGAAGCTAGCAAGTGTCAATCCAACACTGGACTTCAACATAGAACGCATTTTATCTAAAGATATTTTTCAATGTCGAGGCACTACTGCATCATCTGCCTTTGGCTTCTTCCCAGACATTGTTCATCCCCGATTACACCCACCAAAATATACACAAGTTGGGATGCCCAGCATTGTGAACCCCACTGATGCATTTGGAAGAGTAATCCATGCTCCATTAGGAACTAACAGTGCATTCAAAGAACCTAAACATCAGATGCCCAACAATTTGAATGGAGAGTTCCAGGACGTCATTGAGATGCCTTTTACTCATGACCATCATGGATCAAATGATCAACCCTGAGATTGATTCCACAACTGAAGCAAGAGATCAATATGTGCCATGGGCTTTCAGCAAAACTGTGATATATGAGCATGTTGATATCATGGTACTAGCTCACGGCTGATCACTGAAGTATAAGCATCCAAAATGCTTAGTTAGTGCTATTTTTCTCATGTTCATAGCAGCAATTGACCTCCTGTGGAAGCCTCTCTTTGGATGTTCCATTTGCTGTTATAGAAAGTTGGGAGATAAAAAAAAAAGGATGTTCACATGGAGATCTCAAGCAATTTGTTCTCCACTGAAGTAGTCTACAGTCTTGAAATGGCGAGAAGCTTCATTTTGCAAGAAGGTGATTTTTCTGTGGTCTCGTCAACCCCAGGATTATTACATACACTAGCTAGCATTGTGAGGCTACAGAAATTGTTCTTTGTTGTACTTGCTTAGCCCATGTTCCATCTGACAAGCAACATAGGCAGAAATGCAGTCACTGATTTTGTATTTGTTGAAAAAAAAAATAAATGGGCTTGGCCTGATGTAGCAAGCATTTGAATTTTGCAACGGGTGCCTATTGGCACAGATGTTTTTATTCCAGCAAAGCTGTGAATTCTGAAAGAGAAGAAAAGAGA ]
[+] EMBL AU182211 [ CGAATTGGAGAGCGGCGTCCTCTCTGATCCTTTTTTTTCCTTTATTGCA TCTCTCTCTCTCTCTCGCCATTTTTCTTCTAGGTTGGTCTCTGGATCAGGCCATTGAGGGGGAAAGAAAAGGTGCGGGTTTTGGGGGGAGGTTGTTCTTGCGGGAGGCCGTTGATTTCGCCGTGTGATCGGAGGGAGTGAAAAGGAGATGAATGAGAAGGACGCCACTGATTTGGAGGAGAGGAGTGAGGCCAGTGAGCACGGCCAAGCTCTGAGTTTCCATGGTGGTGCCATGTTCTTGCAAGAGGCTCAGATTGCTTCTCCTGCAGCTGCAAATAATGCATTGACCTCCATGGGGAATCCTTTCCCAAACCCcc ]
[-] EMBL CB620970 [ GGAAGAGTAATCCATGCTCCATTAGGAACTAACAGTGCATTCAAAGAACCTAAACATCAGATGCCCAACAATTTGAATGGAGAGTTCCAGGACGTCATTGAGATGCCTTTTACTCATGACCATCATGGATCAAATGATCAACCCTGAGATTGATTCCACAACTGAAGCAAGAGATCAATATGTGCCATGGGCTTTCAGCAAAACTGTGATATATGAGCATGTTGATATCATGGTACTAGCTCACAGCTGATCACTGAAGTATAAGCATCCAAAATGCTTAGTTAGTGCTATTTTTTTCATGTTCATAGCAGCAATTGACCTCCTGTGGAAGCCTCTCTTTGGATGTTCCATTTGCTGTTATAGAAAGTTGGGAGATAAAAAAAAAAGGATGTTCACATGGAGATCTCAAGCAATTTGTTCTCCACTGAAGTAGTTTACAGTCTTGAAATGGCGAGAAGCTTCATTTTGCAAGAAGGTGATTTTTTTGTGGTCTCGTCAACCCCAGGATTATTACATACACTAGCTAGCATTGTGAGGCTACAGAAATTGTTCTTTGTTGTACTTGCTTAGCCCATGTTCCATTTGACAAGCAACATAGGCAGAAATGCAGTCACTGATTTTGTATTTGTTGAAAAAAAAAATAAATGGGCTTGGCCTGATGTAGCAAGCATTTGAATTTTGCAACGGGTGCATATTGGCTCAAAGGTTTTTA ]
[+] EMBL AU030951 [ TGGTACTAGCTCACAGCTGATCACTGAAGTATAAGCATCCAAAATGCTTAGTTAGTGCTATTTTTCTCATGTTCATAGCAGCAATTGACCTCCTGTGGAAGCCTCTCTTTGGATGTTCCATTTGCTGTTATAGAAAGTTGGGAGATAAAAAAAAAAGGATGTTCACATGGAGATCTCAAGCAATTTGTTCTCCACTGAAGTAGTCTACAGTCTTGAAATGGCGAGAAGCTTCATTTTGCAAGAAGGTGATTTTTCTGTGGTCTCGTCAACCCCAGGATTATTACATACACTAGCTAGCATTGTGAGGCTACAGAAATTGTTCTTTGTTGTACTTGCTTAGCCCATGTTCCATCTGACAAGCAACATAGGCAGAAATGCAGTCACTGATTTTGTATTTGTTGAAAAAAAAAATAAATGGGCTTGGCCTGATGTAGCAAGCATTTGAATTTTGCAACGGGTGCATANTGGCACAGATGTTTTTATNTCNGCNAAGCTGTGAANNCTGAAAGAGAA AAAAGAAAGG]
consensusID : consensus_10001#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2121 fasta sequence
[ATTTTCTTGATTCTTGAAGGATGGTGGGGTGAAGCATGCAGAAGGTGGTGAGCAATTAGCAACTGTCGGTTCAGCGCAGAAGAATGAGGATGATGAAAAGGGTGAACCAAAGAGGTCTTCTGTGGCGTCCGGGAAATCCAGTGGGAAGCAAATAAAGGATAATGCAGGTTCACCAAAGGAAGACTATATACATGTAAGAGCACGGCGCGGTCAGGCTACAAACAGCCATAGTCTTGCCGAAAGGGTTAGGAGGGAGAAGATCAGTGAAAGGATGAAATATCTTCAGGATCTTGTTCCTGGTTGTAGTAAAGTAACTGGTAAGGCTGTTATGCTGGATGAGATAATTAACTATGTTCAATCATTACAGAGGCAGGTTGAGGTATGATGTTTGTAAAACTTGTAGGGCCATTTTCAGTTTTACTTGCATAGTCCTGCTGCGATGTAATCTGGTATACCCAATGTGTGCATGTTGGGCAGTTTTTGTCGATGAAGCTAGCAAGTGTCAATCCAACACTGGACTTCAACATAGAACGCATTTTATCTAAAGATATTTTTCAATGTCGAGGCACTACTGCATCATCTGCCTTTGGCTTCTTCCCAGACATTGTTCATCCCCGATTACACCCACCAAAATATACACAAGTTGGGATGCCCAGCATTGTGAACCCCACTGATGCATTTGGAAGAGTAATCCATGCTCCATTAGGAACTAACAGTGCATTCAAAGAACCTAAACATCAGGTTTGTACCATCACTTGCATTTGGCTAAATGGCCATTTTCATTTCATGCTCTTTATACCAAATACTGTGTTCATGAAAAATAGGACAAGTTTCTGCAAGATGTTCCAAGACCTAATTTAGTGTTATATGGCTTGGTGTTTCGAGAATACTGCTCCACAGATAGTCGTTGAAAAGAATGTCCACATAATATTTTAAACCAAGAAAAGCTAGTCCCCTTTATATCCTTTTGCTGGGTCTTGCTTCACTACCCATCTTTCCAAAAAGTTCGTGGGTCTTAAAAGCAAAGCAAACTAGATAACATAACTAAACTGAGACATTTTAGACAACAAACAAAATTCCTACTATCTGTTTTTCATAACTAGCCAGATTGTGCCTGATTCTTTTGGCCATGCAAGCTGTTTGAACCTAGTCCATCAATCAGTCTCTTTAGCTTCTGACTCATTAACCCTCTTCAACCTGATTTTAGTGGGAAGAGCATTGTTGATGTTAACCGACATTGTAACCTCAGTAGCACTAACCATTTCACTAGTAAACCAACTAAAAATGTACAAATGCAGCTTGTTATATATCTAATTGTATCTTCATCACTACATATTTGCCTTCACAGTTATCTAAAACATATGCTTTCATATTCATAAACATTTTTTTGGAAAGCGGAGTACCAAAGCACTGTTTTAGTATTTTGCAATCCTCTTATTACTTGTGCATTGGACAGATGCCCAACAATTTGAATGGAGAGTTCCAGGACGTCATTGAGATGCCTTTTACTCATGACCATCATGGATCAAATGATCAACCCTGAGATTGATTCCACAACTGAAGCAAGAGATCAATATGTGCCATGGGCTTTCAGCAAAACTGTGATATATGAGCATGTTGATATCATGGTACTAGCTCACAGCTGATCACTGAAGTATAAGCATCCAAAATGCTTAGTTAGTGCTATTTTTCTCATGTTCATAGCAGCAATTGACCTCCTGTGGAAGCCTCTCTTTGGATGTTCCATTTGCTGTTATAGAAAGTTGGGAGATAAAAAAAAAAGGATGTTCACATGGAGATCTCAAGCAATTTGTTCTCCACTGAAGTAGTCTACAGTCTTGAAATGGCGAGAAGCTTCATTTTGCAAGAAGGTGATTTTTCTGTGGTCTCGTCAACCCCAGGATTATTACATACACTAGCTAGCATTGTGAGGCTACAGAAATTGTTCTTTGTTGTACTTGCTTAGCCCATGTTCCATCTGACAAGCAACATAGGCAGAAATGCAGTCACTGATTTTGTATTTGTTGAAAAAAAAAATAAATGGGCTTGGCCTGATGTAGCAAGCATTTGAATTTTGCAACGGGTGCATATTGGCACAGATGTTTTTATTCCAGCAAAGCT]
[+] EMBL AK101279 [ATTTTCTTGATTCTTGAAGGATGGTGGGGTGAAGCATGCAGAAGGTGGTGAGCAATTAGCAACTGTCGGTTCAGCGCAGAAGAATGAGGATGATGAAAAGGGTGAACCAAAGAGGTCTTCTGTGGCGTCCGGGAAATCCAGTGGGAAGCAAATAAAGGATAATGCAGGTTCACCAAAGGAAGACTATATACATGTAAGAGCACGGCGCGGTCAGGCTACAAACAGCCATAGTCTTGCCGAAAGGGTTAGGAGGGAGAAGATCAGTGAAAGGATGAAATATCTTCAGGATCTTGTTCCTGGTTGTAGTAAAGTAACTGGTAAGGCTGTTATGCTGGATGAGATAATTAACTATGTTCAATCATTACAGAGGCAGGTTGAGGTATGATGTTTGTAAAACTTGTAGGGCCATTTTCAGTTTTACTTGCATAGTCCTGCTGCGATGTAATCTGGTATACCCAATGTGTGCATGTTGGGCAGTTTTTGTCGATGAAGCTAGCAAGTGTCAATCCAACACTGGACTTCAACATAGAACGCATTTTATCTAAAGATATTTTTCAATGTCGAGGCACTACTGCATCATCTGCCTTTGGCTTCTTCCCAGACATTGTTCATCCCCGATTACACCCACCAAAATATACACAAGTTGGGATGCCCAGCATTGTGAACCCCACTGATGCATTTGGAAGAGTAATCCATGCTCCATTAGGAACTAACAGTGCATTCAAAGAACCTAAACATCAGGTTTGTACCATCACTTGCATTTGGCTAAATGGCCATTTTCATTTCATGCTCTTTATACCAAATACTGTGTTCATGAAAAATAGGACAAGTTTCTGCAAGATGTTCCAAGACCTAATTTAGTGTTATATGGCTTGGTGTTTCGAGAATACTGCTCCACAGATAGTCGTTGAAAAGAATGTCCACATAATATTTTAAACCAAGAAAAGCTAGTCCCCTTTATATCCTTTTGCTGGGTCTTGCTTCACTACCCATCTTTCCAAAAAGTTCGTGGGTCTTAAAAGCAAAGCAAACTAGATAACATAACTAAACTGAGACATTTTAGACAACAAACAAAATTCCTACTATCTGTTTTTCATAACTAGCCAGATTGTGCCTGATTCTTTTGGCCATGCAAGCTGTTTGAACCTAGTCCATCAATCAGTCTCTTTAGCTTCTGACTCATTAACCCTCTTCAACCTGATTTTAGTGGGAAGAGCATTGTTGATGTTAACCGACATTGTAACCTCAGTAGCACTAACCATTTCACTAGTAAACCAACTAAAAATGTACAAATGCAGCTTGTTATATATCTAATTGTATCTTCATCACTACATATTTGCCTTCACAGTTATCTAAAACATATGCTTTCATATTCATAAACATTTTTTTGGAAAGCGGAGTACCAAAGCACTGTTTTAGTATTTTGCAATCCTCTTATTACTTGTGCATTGGACAGATGCCCAACAATTTGAATGGAGAGTTCCAGGACGTCATTGAGATGCCTTTTACTCATGACCATCATGGATCAAATGATCAACCCTGAGATTGATTCCACAACTGAAGCAAGAGATCAATATGTGCCATGGGCTTTCAGCAAAACTGTGATATATGAGCATGTTGATATCATGGTACTAGCTCACAGCTGATCACTGAAGTATAAGCATCCAAAATGCTTAGTTAGTGCTATTTTTCTCATGTTCATAGCAGCAATTGACCTCCTGTGGAAGCCTCTCTTTGGATGTTCCATTTGCTGTTATAGAAAGTTGGGAGATAAAAAAAAAAGGATGTTCACATGGAGATCTCAAGCAATTTGTTCTCCACTGAAGTAGTCTACAGTCTTGAAATGGCGAGAAGCTTCATTTTGCAAGAAGGTGATTTTTCTGTGGTCTCGTCAACCCCAGGATTATTACATACACTAGCTAGCATTGTGAGGCTACAGAAATTGTTCTTTGTTGTACTTGCTTAGCCCATGTTCCATCTGACAAGCAACATAGGCAGAAATGCAGTCACTGATTTTGTATTTGTTGAAAAAAAAAATAAATGGGCTTGGCCTGATGTAGCAAGCATTTGAATTTTGCAACGGGTGCATATTGGCACAGATGTTTTTATTCCAGCAAAGCT]
[+] EMBL AA750678 [ gTTCCACAACTGAAGCAAGAGATCAATATGTGCCATGGGCTTTCAGCAAAACTGTGATATATGAGCATGTCGATATCA GGTACTAGCTCACAGCTGATCACTGAAGTATAAGCATCCAAAATGCTTAGTTAGTGCTATTTTTCTCATGTTCATAGCAGC ATTGA CT CTGT GAAG CTCTCTTTGGATGTTCCATTT CTG TATAG AAGT GGAGATAAAAAAggtgt ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10001#0 ACCCCCTCTGGGGGACCTCTGAATACTTCGATCAGAGTAACGGTGCGGTGCCAAACTGAT 60
consensus_10001#1 ------------------------------------------------------------
consensus_10001#0 CAGATCACACACTTCAGACTACAGTCAAACAGAGCCCTTGCTTGCTTTGCTTGTGTCTTC 120
consensus_10001#1 ------------------------------------------------------------
consensus_10001#0 AACTTCAGAGACCCCCTCCTACCCTCAAAAAATTTCCCCTTTCTTTTCCTCCGTTTCTTG 180
consensus_10001#1 ---------------------------------------ATTTTCTTGATTCTTGAAGGA 21
** * ** * * *
consensus_10001#0 CAGCGACAAGAGAAATACTAATACTCCTCCTCCTACTACTGCTACTGTGCAAGGGGAAGG 240
consensus_10001#1 TGGTGGGGTGAAGCATGCAGAAGGTGGTGAGCAATTAGCAACTGTCGGTTCAGCGCAGAA 81
* * ** ** * * * * * * ** * ** * *
consensus_10001#0 ACACGACGACGAATTGGAGAGCGGCGTCCTCTCTGATCCTTTTTTTTCCTTTATTGCATC 300
consensus_10001#1 GAATGAGGATGA--TGAAAAG-GGTGAACCAAAGAGGTCTTCTGTGGCGTCCGGGAAATC 138
* ** ** ** ** * ** ** * * *** * * * * ***
consensus_10001#0 TCTCTCTCTCTCTCGCCATTTTTCTTCTAGGTTGGTCTCTGGATCAGGCCATTGAGGGGG 360
consensus_10001#1 -CAGTGGGAAGCAAATAAAGGATAATGCAGGTTCACCAAAGGA--AGACTATATACATGT 195
* * * * * * ***** * *** ** * ** * *
consensus_10001#0 AAAGAAAAGGTGCGGGTTTTGGGGGGAGGTTGTTCTTGCGGGAGGCCGTTGATTTCGCCG 420
consensus_10001#1 AAGAGCACGGCGCGG--TCAGGCTACAAACAGCCATAGTC-----TTGCCGAAAGGGTTA 248
** * ** **** * ** * * * * * ** *
consensus_10001#0 TGTGATCGGAGGG-AGTGAAAAGGAGATGAATGAGAAGGACGCCACTGATTTGGAGGAGA 479
consensus_10001#1 GGAGGGAGAAGATCAGTGAAAGGATGAAATATCTTCAGGATCTTGTTC-CTGGTTGTAGT 307
* * * ** ******* * ** ** **** * * * * **
consensus_10001#0 GGAGTGAGGCCAGTGAGCACGGCCAAGCTCTGAGTTTCCATGGTGGTGCCATGTTC--TT 537
consensus_10001#1 AAAGTAA--CTGGTAAG-GCTGTTATGCT---GGATGAGATAATTA-ACTATGTTCAATC 360
*** * * ** ** * * * *** * * ** * * ****** *
consensus_10001#0 GCAAGAGGCTCAGATTGCTTCTCCTGCAGCTGCAAATAATGCATTGACCTCCATGGCGAA 597
consensus_10001#1 ATTACAGAGGCAGGTTGAGG-TATGATGTTTGTAAAACTTGTAGGGCCATTTTCAGTT-- 417
* ** *** *** * ** *** ** * * * * *
consensus_10001#0 TCCTTTCCCTATCCCTCCTGGGTTGTGGAATCCACCTTCACACAACATGGGT---TTAGG 654
consensus_10001#1 TTACTTGCATAGTCCTGCTGCGATGT--AATCTGG-TATACCCAATGTGTGCATGTTGGG 474
* ** * ** *** *** * *** **** * ** *** ** * ** **
consensus_10001#0 CGAAACCAGTTTTTCATCCTTGTTGGGGATGCTGTCGGCCGGCGCGCCGCCACCGTTTGT 714
consensus_10001#1 CAGTTTTTGTCGATGAAGCTAGCAAGTGTCAATCCAACACTGGACTTCAACATAGAACGC 534
* ** * * ** * * * * * * * * ** * *
consensus_10001#0 GGCTACTCCCGGGTTTGTAGATTCCACGGCGGGGTTTCCTTGCTACAATGGNAGGCATCT 774
consensus_10001#1 ATTTTATCTAAAGATATT--TTTCAATGTCGAGGCACTACTGCATCATCTGCCTTTGGCT 592
* ** * * * *** * * ** ** *** ** * **
consensus_10001#0 TGGAGCCATG-ATCAATCACCCTTTCCCTGGTATCCACCAGCCTTTGGGTGATTTCCAAA 833
consensus_10001#1 TCTTCCCAGACATTGTTCATCCC--CGATTACACCCACCAAAATATACACAAGTT----- 645
* *** ** *** ** * * * ****** * * * **
consensus_10001#0 ACGGCGTCGAGCCATGTAGGGAG-ATTGAGGATATTGAGATTGAAGGATCCAAGAATGTG 892
consensus_10001#1 GGGATGCCCAGCATTGTGAACCCCACTGATGCATTTGGAA--GAGTAATCCATGC-TCCA 702
* * * *** *** * *** * *** * ** ***** * *
consensus_10001#0 TCACAAACTGGTGAGAAGCAGCAAGGGGATGGTGAGACAACGCATGCCGTCGATTCCTCC 952
consensus_10001#1 TTAGGAACTAACAGTGCATTCAAAGAACCTAAACATCAGGTTTGTACCATCACTTGCATT 762
* * **** *** * * * ** ** ** *
consensus_10001#0 T--CCAAGGAGCTAAGCATGCCAGGGCGCAATGGTGGCGCTGGCCATGATGA-GGGGACT 1009
consensus_10001#1 TGGCTAAATGGCCATTTTCATTTCATGCTCTTTATACCAAATACTGTGTTCATGAAAAAT 822
* * ** ** * * * * * ** * * * * *
consensus_10001#0 AGGGTGTCTTGTTCCAAGAAGAGGAAAAGATCAGGACAGGATGGTGGGGTGAAGCATGCA 1069
consensus_10001#1 AGGACAAGTTTCTGCAAGATGTTCCAAGACCTAATTTAGTGTTATATGGCTTGGTGTTTC 882
*** ** * ***** * ** * ** * * ** * *
consensus_10001#0 GAAGGTGGTGAGCAATTAGCAACTGTCGGTTCAG-----CGCAGAAGAATGAGGATGATG 1124
consensus_10001#1 GAGAATACTGCTCCACAGATAGTCGTTGAAAAGAATGTCCACATAATATTTTAAACCAAG 942
** * ** * * * ** * * ** ** * * * * *
consensus_10001#0 AAAAGGGTGAACCAGAGAGGTC-TTCTGTGGCGTCCGGGAAATCCAGTGGGAAGCAAATA 1183
consensus_10001#1 AAAAGCTAGTCCCCTTTATATCCTTTTGCTGGGTCTTG---CTTCACTACCCATCTTTCC 999
***** * ** * ** ** ** * *** * * ** * * *
consensus_10001#0 AAGGATAATGCAGGTTCACCAAAGGAAGACTATATACATGTAAGAGCACGGCGCGGTCAG 1243
consensus_10001#1 AAAAAGTTCGTGGGT-CTTAAAAGCAAAGCAAACTAGATAACATAACTAAACTGAGACAT 1058
** * * *** * **** ** * * ** ** * * * * * **
consensus_10001#0 GCTACA-AACAGCCATAGTCTTGCCGAAAGGGTTAGGAGGGAGAAGATCAGTGAAAGGAT 1302
consensus_10001#1 TTTAGACAACAAACAAAATTCCTACTATCTGTTTT------TCATAACTAGCCAGATTGT 1112
** * **** ** * * * * * ** * * ** * * *
consensus_10001#0 GAAATATCTTCAGGATCTTGTTC-CTGGTTGTAGTAAAGTAACTGGTAAGGCTGTTATGC 1361
consensus_10001#1 GCCTGATTCTTTTGGCCATGCAAGCTGTTTGAACCTAGTCCATCAATCAGTCTCTTTAGC 1172
* ** * * * ** *** *** * * * * ** ** ** **
consensus_10001#0 TGGATGAGATAATTAACTATGTTCAATCATTACAGAGGCAGGTTGAGTTTTTGTCGATGA 1421
consensus_10001#1 T--TCTGACTCATTAACCCTCTTCAACC---------------TGA-TTTTAGTGGGAAG 1214
* * ****** * ***** * *** **** ** *
consensus_10001#0 AGC-TAGCAAGTGTCAATCCAACACTG-GACTTCAACA-TAGAACGCATTTTATCTAAAG 1478
consensus_10001#1 AGCATTGTTGATGTTAA-CCGACATTGTAACCTCAGTAGCACTAACCATTTCACTAGTAA 1273
*** * * *** ** ** *** ** ** *** * * * ***** * *
consensus_10001#0 AT-ATTTTTCAATGTCGAGGCACTACTGCATCATCTGCCTTTGGCTTCTTCCCAGACATT 1537
consensus_10001#1 ACCAACTAAAAATGTACAAATGCAGCT-TGTTATATATCT--AATTGTATCTTCATCACT 1330
* * * ***** * * ** * ** * ** * ** ** *
consensus_10001#0 GTTCATCCCCGATTACACCCACCAAAATATACACAAGTTGGGATGCCCAGCATTGTGAAC 1597
consensus_10001#1 ACATATTTGCCTTCACAGTTATCTAAA---ACATATGCTTTCATATTCA------TAAAC 1381
** * * *** * * *** *** * * * ** ** * ***
consensus_10001#0 CCCACTGATGCATTTGGAAGAGTAATCCATGCTCCATTAGGAACTAACAGTGCATTCAAA 1657
consensus_10001#1 ATTTTTTTGGAAAGCGGAGTACCAAAGCA--CTGTTTTAGTATTTTGCAATCC--TCTTA 1437
* * * *** * ** ** ** **** * * ** * * ** *
consensus_10001#0 GAACCTAAACAT----CAGATGCCCAACAATTTGAATGGAGAGTTCCAGGACGTCATTGA 1713
consensus_10001#1 TTACTTGTGCATTGGACAGATGCCCAACAATTTGAATGGAGAGTTCCAGGACGTCATTGA 1497
** * *** ********************************************
consensus_10001#0 GATGCCTTTTACTCATGACCATCATGGATCAAATGATCAACCCTGAGATTGATTCCACAA 1773
consensus_10001#1 GATGCCTTTTACTCATGACCATCATGGATCAAATGATCAACCCTGAGATTGATTCCACAA 1557
************************************************************
consensus_10001#0 CTGAAGCAAGAGATCAATATGTGCCATGGGCTTTCAGCAAAACTGTGATATATGAGCATG 1833
consensus_10001#1 CTGAAGCAAGAGATCAATATGTGCCATGGGCTTTCAGCAAAACTGTGATATATGAGCATG 1617
************************************************************
consensus_10001#0 TTGATATCATGGTACTAGCTCACAGCTGATCACTGAAGTATAAGCATCCAAAATGCTTAG 1893
consensus_10001#1 TTGATATCATGGTACTAGCTCACAGCTGATCACTGAAGTATAAGCATCCAAAATGCTTAG 1677
************************************************************
consensus_10001#0 TTAGTGCTATTTTTCTCATGTTCATAGCAGCAATTGACCTCCTGTGGAAGCCTCTCTTTG 1953
consensus_10001#1 TTAGTGCTATTTTTCTCATGTTCATAGCAGCAATTGACCTCCTGTGGAAGCCTCTCTTTG 1737
************************************************************
consensus_10001#0 GATGTTCCATTTGCTGTTATAGAAAGTTGGGAGATAAAAAAAAAAGGATGTTCACATGGA 2013
consensus_10001#1 GATGTTCCATTTGCTGTTATAGAAAGTTGGGAGATAAAAAAAAAAGGATGTTCACATGGA 1797
************************************************************
consensus_10001#0 GATCTCAAGCAATTTGTTCTCCACTGAAGTAGTCTACAGTCTTGAAATGGCGAGAAGCTT 2073
consensus_10001#1 GATCTCAAGCAATTTGTTCTCCACTGAAGTAGTCTACAGTCTTGAAATGGCGAGAAGCTT 1857
************************************************************
consensus_10001#0 CATTTTGCAAGAAGGTGATTTTTCTGTGGTCTCGTCAACCCCAGGATTATTACATACACT 2133
consensus_10001#1 CATTTTGCAAGAAGGTGATTTTTCTGTGGTCTCGTCAACCCCAGGATTATTACATACACT 1917
************************************************************
consensus_10001#0 AGCTAGCATTGTGAGGCTACAGAAATTGTTCTTTGTTGTACTTGCTTAGCCCATGTTCCA 2193
consensus_10001#1 AGCTAGCATTGTGAGGCTACAGAAATTGTTCTTTGTTGTACTTGCTTAGCCCATGTTCCA 1977
************************************************************
consensus_10001#0 TCTGACAAGCAACATAGGCAGAAATGCAGTCACTGATTTTGTATTTGTTGAAAAAAAAAA 2253
consensus_10001#1 TCTGACAAGCAACATAGGCAGAAATGCAGTCACTGATTTTGTATTTGTTGAAAAAAAAAA 2037
************************************************************
consensus_10001#0 TAAATGGGCTTGGCCTGATGTAGCAAGCATTTGAATTTTGCAACGGGTGCATATTGGCAC 2313
consensus_10001#1 TAAATGGGCTTGGCCTGATGTAGCAAGCATTTGAATTTTGCAACGGGTGCATATTGGCAC 2097
************************************************************
consensus_10001#0 AGATGTTTTTATTCCAGCAAAGCTGTGAATTCTGAAAGAGAAGAAAAGAGAGG 2366
consensus_10001#1 AGATGTTTTTATTCCAGCAAAGCT----------------------------- 2121
************************
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||