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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10014#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 859 fasta sequence
[ACGATATGAATGCTCTTCTGGGAGATTTTGGAATTGCACGTCTATATCTTGATTCTCAGTCAACGTACACAAGGCTCAGTTAGCACAATTGGTCTGAAGGGAACAATTGGTTATATTCCTCCAGAGTACGGAGGCCGGGGCCATGCATCAACACTAGGAGATGTTTATA-TTTTGGGATAATGTTGTTGGAGATTTTTA-CA-GGAAAAAGGCCAACAGATCCTATGTTCA-CGGA-CGGACTTGACATTGTCAGCTTTGTGGACAGAAACTTTCCGGATC-AAATATTCCA-AGTCATCGATGTTCG-TCTGAAGGAAGAATGCAACAAC-TTAT-CT-CGAGATAACA-TGGTATCCGAAGATACAATCT-AT-CA-ATT-GTT-GGTGTCTTT-GCTA-CA-AGT-AGCACT-TT-CT-TGCACACGCCCAT-CACCAT-CT-GAACGA-TT-GAA-CA-TGAAGCA-AGCAGCA-ACCCAAATACAT-GCTATCAATGCGTCGCTTCA-CGGATGGAATGAAAAAAAGTATGCCTCA-GTTGATGAGTA-GGGTGAATTGTACAACGTAC-ATGGACATACATACATATTTTTAGAGAAGGGAACATACATCTGATAAACACGTACGTATTGGTTGTGTCTTGTATAGTATAACAAATTAGCGTGGCGGCCCGCGC-AATTGCACATTACCATGGGCATATTTTTTTTCTCACATAATAGCATATATATTTTCATATTTTATTATTAAAATATATTAAAATAGCAAGATAATTTTAAATTCTGTACTAACTTGGTC-AAGTAACCCATGTGTAATATTTATATACTATATATTATATATGTGATAGTTATTAATTATTAATTATTTTTTAAAAAAAGTTATTTATAAAAAAAAAA]
[+] EMBL BI811659 [ACGATATGAATGCTCTTCTGGGAGATTTTGGAATTGCACGTCTATATCTTGATTCTCAGTCAACGTACACAAGGCTCAGTTAGCACAATTGGTCTGAAGGGAACAATTGGTTATATTCCTCCAGAGTACGGAGGCCGGGGCCATGCATCAACACTAGGAGATGTTTATAGTTTTGGGATAATGTTGTTGGAGATTTTTA CA GGAAAAAGGCCAACAGATCCTATGTTCA CGGA CGGACTTGACATTGTCAGCTTTGTGGACAGAAACTTTCCGGATCAAAATATTCCA AGTCATCGATGTTCG TCTGAAGGAAGAATGCAACAAC TTAT CT CGAGATAACA TGGTATCCGAAGATACAATCT AT CA ATT GTT GGTGTCTTT GCTA CA AGT AGCACTCTT CT TGCACACGCCCAT CACCAT CT GAACGA TT GAA CA TGAAGCA AGCAGCA ACCAAAATACAT GCTATCAATGCGTCGCTTCA CGGATGGAATG AAAAAAGTATGCCTCA GTTGATGAGTA GGGTGAATTGTACAACGTAC ATGGACATACATACATATTTTTAGAGAAaaa ]
[+] EMBL BI812125 [ TTATA TTTTGGGATAATGTTGTTGGAGATTTTTACCACGGAAAAAGCCCACCAGATCCTATGTTCACCGGACCGGACTTGACATTGTCAGCTTTGTGGACAGAAACTTTCCGGATC AAATATTCCACAGTCATCGATGTTCG TCTGAAGGAAGAATGCAACAAC TTATGCTGCGAGATAACA TGGTATCCGAAGATACAATCT ATCCA ATTGGTTGGGTGTCTTTGGCTACCA AGTGAGCACT TTGCTGGGCACACGCCCATGCACCATGCTGGAACGA TTGGAA CA TGAAGCACAGCCGCA ACCCAAATACATGGCTATCAATGCGGCGCTTCACCGGATGGAATGAAAAAAAGTATGCCTCACGTTGATGAGTA GGGTGAATTGTAC ACGTAC ATGGACATACATACATATTTTTAGAGAAGGGAACATAaaaaaaaaa ]
[+] EMBL BM420283 [ TATA TTTTGGGATAATGTTGTTGGAGATTTTTA CA GGAAAAA GCCCACAGATCCTATGTTCA CGGA CGGACTTGACCTTGTCAGCTTTGTGGACAGAAACTTTCCGGATC AAATATTCCA AGTCATCGATGTTCG TCTGAAGGAAGAATGCAACAACGTTAT CT CGAGATAACACTGGTATCCGAAGATACCATCT AT CACATT GTT GGTGTCTTT GCTA CA AGT AGCACT TT CT TGCACACGCCCAT CACCAT CT GAACGA TT GAACCACTGAAGCA AGCAGCC ACCCAAATACAT GCTATCAATGCGTCGCTTCACCGGATGGAATGAAAAAAAGTATGCCTCA GTTGATGAGTA GGGTGAATTGTACAACGTAC ATGGACATACATACATATTTTTAGAGAAGGGAACATACATCTGATA ]
[+] EMBL BQ908895 [ ccGCTTTGTGGACAGAAACTTTCCGGATC AAATATTCCA AGTCATCGATGTTCG TCTGAAGGAAGAATGCAACAAC TTAT CT CGAGATAACACTGGTATCCGAAGATACAATCT AT CACATT GTT GGTGTCTTT GCTACCACAGT AGCACT TT CT TGCACACGCCCAT CACCAT CT GAACGA TT GAA CA TGAAGCA AGCAGCA ACCCAAATACAT GCTATCAATGCGTCGCTTCA CGGATGGAATGAAAAAAAGTATGCCTCA GTTGATGAGTA GGGTGAATTGTACAACGTAC ATGGACATACATACATATTTTTAGAGAAGGGAACATACATCTGATAAAaaaaaaa ]
[+] EMBL BI813605 [ ATCGATGTTCGTTCTGAAGGAAGAATGC CGAC TTAT CT CGAGATAACA TGGTATCCGAAGATACCATCT AT CA ATT GTT GGTGTCTTT GCTA CA AGT AGCACT TT CT TGCACACGCCCAT CACCAT CT GAACGA TT GAA CA TGAAGCA AGCAGCA ACCCAAATACAT GCTATCAATGCGTCGCTTCA CGGATGGAATGAAAAAAAGTATGCCTCA GTTGATGAGTA GGGTGAATTGTAC ACGTAC ATGGACATACATACATATTTTTAGAGAAGGGAACATACATCTGATAAACACGTACGTATTGGTTGTGTCTTGTATAGTATAAC AATTAGCGTGGCGGCCCGC C AATTGCACATTACCATGGGCATATTTTTTTTCTCACATAATAGCATATATATTTTCATATTTTATTATTAAAATATATTAAAATAGCAAGATAATTTTAAATTCTGTACTAACTTGGTC AAGTAACCCATGTGTAATATTTATATACTATATATTATATATGTGATAGTTATTAATTATTAAaaa ]
[+] EMBL BQ906386 [ ATGCAACNAC TTAT CT CGAGATAACA TGGTATCCGAAGATACAATCTGAT CA ATT GTT GGTGTCTTT GCTA CA AGT AGCACT TT CT TGCACACGCCCAT CACCAT CT GAACGAGTT GAA CA TGAAGCA AGCAGCA ACCCAAATACAT GCTATCAATGCGTCGCTTCA CGGATGGAATGAAAAAAAGTATGCCTCA GTTGATGAGTA GGGTGAATTGTACAACGTAC ATGGACATACATACATATTTTTAGAGAAGGGAACATACATCTGATAAACACGTACGTATTGGTTGTGTCTTGTATAGTATAACAAATTAGCGTGGCGGCCCGCGC AATTGCACATTACCATGGGCATATTTTTTTTCTCACATAATAGCATATATATTTTCATATTTTATTATTAAAATATATTAAAATAGCAAGATAATTTTAAATTCTGTACTAACTTGGTC AAGTAACCCATGTGTAATATTTATATACTATATATTATATATGTGATACTTATTAATTATTAATTATTTTTTAAAAAAA ]
[+] EMBL BI812312 [ TGAAGCA AGCAGCATACCCAAATACAT GCTATCAATGCGTCGCTTCA CGGATGGAATGAAAAAAAGTATGCCTCACGTTGATGAGTAGGGGTGAATTGTACAACGTACAATGGACATACATACATTTTTTTAGAGAAGGGAACATACATCTGATAAACACGTACGTATTGGTTGTGTCTTGTATAGTATAACCAATTAGCGTGGCGGCCCGCGCAAATTGCACATTACCATGGGCATATTTTTTTTCTCACATAATAGCATATATATTTTCATATTTTATTATTAAAATATATTAAAATAGCAAGATAATTTTAAATTCTGTACTAACTTGGTCAAAGTAACCCATGTGTAATATTTATATACTATATATTATATATGTGATAGTTATTAATTATTAATTATTTTTTAATTTTAGTTATTTATAAAAAAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||