These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10015#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1379 fasta sequence [TTTAGCGCACTCGCTTGCTCAGGCTCCTCCTCATCTTCTTCTCTCCTCTTATCCCCTTCGCCTTCCTCCTCCCCGCCTACACGACCAGTTCCTGGTTTCTGCTGCCTTCCCTCGGTCTGGATCAACAAGAGGAGGTCGTCCAATGGCGAGTGGTGGGAGCAGCAATGCCGGGAGCCTGACGCAGTGGCTGAGGGAGAAGGGGTTCGACGAGGAGGCCATCGGGCGGATGTCGAGACGGTGCAAGAACCTTCACGGCCTTGACGCCGGCGAGGCCTCCGGGGTGTGGGACTACCTCCTGAACGTCGTCAAGATCGAGCGGCGGAAGCTCCGGTACGTGGTCACCAAGTGCCCCAAGGTGCTCACCCTGTCCGTCGACGACAAGCTCGTCCCCACGGTGCAGTGCCTCACCACGCTGCAGGCTAAGCCCGGCGAGGTTGCGCAGGCCATTGTCAAGTTCCCCCAGATACTGTTCCACAGCGTGGAGGAGAAGCTCTGCCCTCTCCTCGCCTTCTTCCAGACGCTTGGCATCTCTGAGAAGCAGCTCGCCAAGCTGCTCATGGTCAACCCGCGCCTCATCAGCTACAGCATTGAGGCCAAGTTCTCGCAGACCGTCAACTTCCTCGTTGGCCTTGGCATTGACAAGGAGGGTATGATCGGCAAGATCATGGGCAAA-GAGCCCTACATCATGGGTTACAGTG-TTGACAAGCGCCTT-CGTCCTACTG-CCGAGTTCCTCAAGT-CGGCGGTCGGGCTTGAGGGGTCAAATCTTCAGAGGGTGATCAT-GAGTTTTCCTGATATTTTGTCGCGAGATGTCGATAAGATTCTGCGG-CCCAATTTG-GCGTTCTTACAGAGCTGCGGTTTCAGCAAGGATCAGGTCATGGCATTGGTGGCTGGATACCCTCCTGTTCTCATCAAGAGTGTCAAGCATTGCCTGGAGCCTAGGATGAAGTTCCTTGTTGAAGAAATGGGGCGGGACATGGGTGAGGTGGTGGATTACCCCCAGTTCTTTCGCCATGGTCTCAAGAGGAGCCTGGAGTACCGCCACAAGGTGCTCAAGCAGATGAATTCAAGGTGCAGCCTCAGTGAGATGCTTGACTGTAATCAGAAGAAGTTTGCCATGAAATTTGGTTTGCTTGCAGCAGTTTAGGCATGCATCCTCTCTTCAGTTCCCATGTAGCATGTTTATTTTTCAGGTGAAAGTTTTTCCTTTTGTACTAGCATTTTGGACATCGAGAATTCAAAGCATTTTGCTTTACTGGGTGTTTTCTGGAATGTCAAGTGCAAATTTGCCTCTTTCAGTGTCATGATTAATGTATAACCTTGCATCAATTCGCNGAAAAAAAAAAAAAACAAAGCATATAAATTTTCTTGTCGGAAAATAT] [+] EMBL CF280147 [TTTAGCGCACTCGCTTGCTCAGGCTCCTCCTCATCTTCTTCTCTCCTCTTATCCCCTTCGCCTTCCTCCTCCCCGCCTACACGACCAGTTCCTGGTTTCTGCTGCCTTCCCTCGGTCTGGATCAACAAGAGGAGGTCGTCCAATGGCGAGTGGTGGGAGCAGCAATGCCGGGAGCCTGACGCAGTGGCTGAGGGAGAAGGGGTTCGACGAGGAGGCCATCGGGCGGATGTCGAGACGGTGCAAGAACCTTCACGGCCTTGACGCCGGCGAGGCCTCCGGGGTGTGGGACTACCTCCTGAACGTCGTCAAGATCGAGCGGCGGAAGCTCCGGTACGTGGTCACCAAGTGCCCCAAGGTGCTC CCCTGTCCGTCGACGACAAGCTCGTCCCCACGGTGCAGTGCCTCACCACGCTGCAGGCTAA CCCGGCGAGGTTGCGCAGGCCATTGTCAAGTTCCCCCGGATACTGTT CACAGCGTGGAGGAGAAGCTCTGCCCTCTCCTCGCCTTCTTCCAGACGCTTGGCATCTCTGAGAAGCAGCACGCCAAGCTGCTCATGGTCAACCCGCGCCTCATCAGCTACAGCATTGAGGCCAAGTTCTCG ] [+] EMBL CF278829 [ CCTCATCTTCTTCTCTCCTCTTATCCCCTTCGCCTTCCTCCTCCCCGCCTACACGACCAGTTCCTGGTTTCTGCTGCCTTCCCTCGGTCTGGATCAACAAGAGGAGGTCGTCCAATGGCGAGTGGTGGGAGCAGCAATGCCGGGAGCCTGACGCAGTGGCTGAGGGAGAAGGGGTTCGACGAGGAGGCCATCGGGCGGATGTCGAGACGGTGCAAGAACCTTCACGGCCTTGACGCCGGCGAGGCCTCCGGGGTGTGGGACTACCTCCTGAACGTCGTCAAGATCGAGCGGCGGAAGCTCCGGTACGTGGTCACCAAGTGCCCCAAGGTGCTCACCCTGTCCGTCGACGACAAGCTCGTCCCCACGGTGCAGTGCCTCACCACGCTGCAGGCTAAGCCCGGCGAGGTTGCGCAGGCCATTGTCAAGTTCCCCCAGATACTGTTCCACAGCGTGGAGGAGAAGCTCTGCCCTCTCCTCGCCTTCTTCCAGACGCTTGGCATCTCTGAGAAGCAGCTCGCCAAGCTGCTCATGGTCAACCCGCGCCTCATCAGCTACAGCATTGAGGCCAAGTTCTCGCAGACCGTCAACTTCCTCGTTGGCCTTGGCATTGACAAGGAGGGTATGATCGGCAAGATCATGGGCAAA GAGCCCTACATCATGGGTTACAGTG TTGACAAGCGCCTT CGTCCTACTG C ] [+] EMBL AK061787 [ TCTCCTCTTATCCCCTTCGCCTTCCTCCTCCCCGCCTACACGACCAGTTCCTGGTTTCTGCTGCCTTCCCTCGGTCTGGATCAACAAGAGGAGGTCGTCCAATGGCGAGTGGTGGGAGCAGCAATGCCGGGAGCCTGACGCAGTGGCTGAGGGAGAAGGGGTTCGACGAGGAGGCCATCGGGCGGATGTCGAGACGGTGCAAGAACCTTCACGGCCTTGACGCCGGCGAGGCCTCCGGGGTGTGGGACTACCTCCTGAACGTCGTCAAGATCGAGCGGCGGAAGCTCCGGTACGTGGTCACCAAGTGCCCCAAGGTGCTCACCCTGTCCGTCGACGACAAGCTCGTCCCCACGGTGCAGTGCCTCACCACGCTGCAGGCTAAGCCCGGCGAGGTTGCGCAGGCCATTGTCAAGTTCCCCCAGATACTGTTCCACAGCGTGGAGGAGAAGCTCTGCCCTCTCCTCGCCTTCTTCCAGACGCTTGGCATCTCTGAGAAGCAGCTCGCCAAGTTGCTCATGGTCAACCCGCGCCTCATCAGCTACAGCATTGAGGCCAAGTTCTCGCAGACCGTCAACTTCCTCGTTGGCCTTGGCATTGACAAGGAGGGTATGATCGGCAAGATCAT GGCAAAGGAGCCCTACATCATGGGTTACAGTG TTGACAAGCGCCTT CGTCCTACTG CCGAGTTCCTCAAGT CGGCGGTCGGGCTTGAGGGGTCAAATCTTCAGAGGGTGATCAT GAGTTTTCCTGATATTTTGTCGCGAGATGTCGATAAGATTCTGCGG CCCAATTTG GCGTTCTTACAGAGCTGCGGTTTCAGCAAGGATCAGGTCATGGCATTGGTGGCTGGATACCCTCCTGTTCTCATCAAGAGTGTCAAGCATTGCCTGGAGCCTAGGATGAAGTTCCTTGTTGAAGAAATGGGGCGGGACATGGGTGAGGTGGTGGATTACCCCCAGTTCTTTCGCCATGGTCTCAAGAGGAGCCTGGAGTACCGCCACAAGGTGCTCAAGCAGATGAATTCAAGGTGCAGCCTCAGTGAGATGCTTGACTGTAATCAGAAGAAGTTTGCCATGAAATTTGGTTTGCTTGCAGCAGTTTAGGCATGCATCCTCTCTTCAGTTCCCATGTAGCATGTTTATTTTTCAGGTGAAAGTTTTTCCTTTTGTACTAGCATTTTGGACATCGAGAATTCAAAGCATTTTGCTTTACTGGGTGTTTTCTGGAATGTCAAGTGCAAATTTGCCTCTTTCAGTGTCATGATTAATGTATA ] [+] EMBL OSS10655A [ CCTCTTATCCCCTTCGNCTTCCTCCTCCCCGCCTACACGACCAGTTCCTGGTTTNTGCTGCCTTCCCTCGGTCTGGNTCAACAAGAGGAGGTCGTCCAATGGCGAGTGGTGGGAGCAGCAATGCCGGGAGCNTGACGCAGTGGCTGAGGGAGAAGGGGTTCGACGAGGAGGCCATCGGGCGGATGTCGAGACGGTGCAAGAACCTTCACGGCCTTGACGCCGGCGAGGCCTCCGGGGTGTGGGACTACCTCCTGAACGTCGTCAAGATCGAGCGGCGGAAGCTCCGGTACGTG ] [+] EMBL AU032507 [ ACAGTGTTTGAC AGCCCCTTCCGTCCTACTGCCCGANTTCCTCAAGTCCGNCGTTCGGGCTTGAGGGGTC AATCTTCAGGGGNTGATCCTGGAGTTTCCCGGATATTTTGTCGCGAGATGTCGATAAGATTCTGCGGCCCCAATTTGNCCGTTCTTACAGAGCTGCGGTTTCAGCAAGGATCAGGTCATGGCATTGGTGGCTGGATACCCTCCTGTTCTCATCAAGAGTGTCAAGCATTGCCTGGANCCTAGGATGAAGTTCCTTGTTGANG AATGGGGCGGGACATGGGTGAGGTGGTGGATTACCCCCAGTTCTTTCGCC TGGTCTCAAGAGGAGCCTGGANTACCGCCACAAGGTGCTCAAGCAGATGAATTCAAGGTGCAGCCTCAGTGAGATGCTTGACTGTAATCAGAAGAAGTTTGCCATGAAATTTGGTTTGCTTGCAGCAGTTTAGGCATGCATCCTCTCTTCAGTTCCCATGTAGCATGTTTATTTTTCAGGTGAAAGTTTTTCCTTTTGTACTAGCATTTTGGACATCGAGAATTCAAAGCATTTTGCTTTACTGGGTGTTTTCTGGAATGTCAAGTGCAAATTTGCCTCTTTCAGTGTCATGATTAATGTATAACCTTGCATCAATTCGCNGAAAAAAAAAAAAAA ] [-] EMBL CF280148 [ TCGCGAGATGTCGATAAGATTCTGCGG CCCAATTTG GCGTTCTTACAGAGCTGCGGTTTCAGCAAGGATCAGGTCATGGCATTGGTGGCTGGATACCCTCCTGTTCTCATCAAGAGTGTCAAGCATTGCCTGGAGCCTAGGATGAAGTTCCTTGTTGAAGAAATGGGGCGGGACATGGGTGAGGTGGTGGATTACCCCCAGTTCTTTCGCCATGGTCTCAAGAGGAGCCTGGAGTACCGCCACAAGGTGCTCAAGCAGATGAATTCAAGGTGCAGCCTCAGTGAGATGCTTGACTGTAATCAGAAGAAGTTTGCCATGAAATTTGGTTTGCTTGCAGCAGTTTAGGCATGCATCCTCTCTTCAGTTCCCATGTAGCATGTTTATTTTTCAGGTGAAAGTTTTTCCTTTTGTACTAGCATTTTGGACATCGAGAATTCAAAGCATTTTGCTTTAaaaaa ] [-] EMBL CF278830 [ GTACCGCCACAAGGTGCTCAAGCAGATGAATTCAAGGTGCAGCCTCAGTGAGATGCTTGACTGTAATCAGAAGAAGTTTGCCATGAAATTTGGTTTGCTTGCAGCAGTTTAGGCATGCATCCTCTCTTCAGTTCCCATGTAGCATGTTTATTTTTCAGGTGAAAGTTTTTCCTTTTGTACTAGCATTTTGGACATCGAGAATTCAAAGCATTTTGCTTTACTGGGTGTTTTCTGGAATGTCAAGTGCAAATTTGCCTCTTTCAGTGTCGTGATTAATGTATAACCTTGCATCAATTCGCAGAAGAGAAAGCAATGCAAAGCATATAAATTTTCTTGTCGGAAAATAT] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||