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Oryza sativa
cluster # 10023 cluster # 10023       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10023#0 length = 1325 sequences # 2  
consensus_10023#1 length = 1296 sequences # 4  
consensus_10023#2 length = 558 sequences # 1  

consensusID : consensus_10023#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1325
fasta sequence
                              [CCCTTCACGCCGTGACCCAGCGATCGACCGGCCGGAATGGATGCGGCGGCGGCGGCGGCGGCGGCGGGAGGAGGAGGAGGGGGAGGCGGTAGCGTCGCGGCGCGGAGCAGCCCGGCGTCCGTGCAGGCCACCAACGACGACGCCGCGGCCAGCAAGCTGTCATGTGTTAATAAAGGATACATGAAGGATGATTATGTGCACTTCTTTGTCAGACGAACAACAAAAAGGGCTCCAATAATAAATCGAGGGTACTATGCACGTTGGTCTGTTCTTAGGAAGCTTCTGCATCAGTTCCTCGGTGCTGGAAATGGCAGTAATGATCAAAACCGGAAACAAATATTATCTCTTGGTGCTGGCTTTGACACGACATTCTTCCAGTTGCAGGACGAAGGCATTGCTCCATACCTTTATGTTGAGTTGGATTTCAAGGAGGTAACCAGCAAAAAGGCTGCCATCATTAACCACTATAGTCAAATGAAGGAAAAGTTAGGACCAGAAGCTTCGATATCAATTGAAAAAGGTGAAGTGAGAAGTGCGCATTACAAGCTCTTTTCTGCTGATATTCGTGACATACCAAAACTTGATTCAGTTATTCAGATGGCTGAAATGGACCCTACAGTGTGTGCTAATTTACTTAGACCCAGCTTCAACCAGTTCTATTGTTATTTGGGCATCTGATAAGTTCTCCACTGCCATATTTTTCTTATATGAGCAGATCCATCCAGATGATGCATTTGGAGAGCAAATGATTATAAACCTTGAGAGTAGAGGATGCCCTCTCCTTGGTATAAATGCTACACCAACCCTAAGTCACAAGGAAAATCTTTTTCTTGATCACGGATGGCAGAGAGCTGTTGCATGGGATATGCTAAAAATATACAATGATTTCATTGACAGTGAAGAAAGACGCAGGATTGAACGATTGGAATTGTTTGATGAGTTCGAAGAGTGGCATATGATGCAGGAACACTATTGTGTGGCTTATGGAATAAATGATGCCAAGGGCCTGTTTGATGATTTTGGGTTTAAGGACTAGCACTCGTCGTGCTCTTTTTGATATCGAACTGAGACAAATTCAACTGGGAATTCCTACTGTTTCCTATGCAGAGAAACGTACTTGAAGTGTGTGAAATGTTTGGCAGAATATGAGAGATGATGGCTATAACAACATTGTACATATTCTGTTTGCAGATACTTGGTTGTATCGATTGTCATGTTGTTATGTATGTTGCTTTTCTGCCTTAGCTGAATGGTTTTTCTGACGTTTCCAAACCCTTCGTATGGGCTCGTCATGCAATTGTATGGTCTGGAGAAGTATTGTCTTA]

[+] EMBL CB659213             [CCCTTCACGCCGTGACCCAGCGATCGACCGGCCGGAATGGATGCGGCGGCGGCGGCGGCGGCGGCGGGAGGAGGAGGAGGGGGAGGCGGTAGCGTCGCGGCGCGGAGCAGCCCGGCGTCCGTGCAGGCCACCAACGACGACGCCGCGGCCAGCAAGCTGTCATGTGTTAATAAAGGATACATGAAGGATGATTATGTGCACTTCTTTGTCAGACGAACAACAAAAAGGGCTCCAATAATAAATCGAGGGTACTATGCACGTTGGTCTGTTCTTAGGAAGCTTCTGCATCAGTTCCTCGGTGCTGGAAATGGCAGTAATGATCAAAACCGGAAACAAATATTATCTCTTGGTGCTGGCTTTGACACGACATTCTTCCAGTTGCAGGACGAAGGCATTGCTCCATACCTTTATGTTGAGTTGGATTTCAAGGAGGTAACCAGCAAAAAGGCTGCCATCATTAACCACTATAGTCAAATGAAGGAAAAGTTAGGACCAGAAGCTTCGATATCAATTGAAAAAGGTGAAGTGAGAAGTGCGCATTACAAGCTCTTTTCTGCTGATATTCGTGACATACCAAAACTTGATTCAGTTATTCAGATGGCTGAAATGGACCCTACAGTGTGTGCTAATTTACTTAGACCCAGCTTCAACCAGTTCTATTGTTATTTGGGCATCTGATAAGTTCTCCACTGCCATATTTTTCTTATATGAGCAGATCCATCCAGATGATGCATTTGGAGAGCAAATGATTATAAACCTTGAGAGTAGAGGATGCCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB659214             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGCGCATTACAAGCTCTTTTCTGCTGATATTCGTGACATACCAAAACTTGATTCAGTTATTCAGATGGCTGAAATGGACCCTACAGTGTGTGCTAATTTACTTAGACCCAGCTTCAACCAGTTCTATTGTTATTTGGGCATCTGATAAGTTCTCCACTGCCATATTTTTCTTATATGAGCAGATCCATCCAGATGATGCATTTGGAGAGCAAATGATTATAAACCTTGAGAGTAGAGGATGCCCTCTCCTTGGTATAAATGCTACACCAACCCTAAGTCACAAGGAAAATCTTTTTCTTGATCACGGATGGCAGAGAGCTGTTGCATGGGATATGCTAAAAATATACAATGATTTCATTGACAGTGAAGAAAGACGCAGGATTGAACGATTGGAATTGTTTGATGAGTTCGAAGAGTGGCATATGATGCAGGAACACTATTGTGTGGCTTATGGAATAAATGATGCCAAGGGCCTGTTTGATGATTTTGGGTTTAAGGACTAGCACTCGTCGTGCTCTTTTTGATATCGAACTGAGACAAATTCAACTGGGAATTCCTACTGTTTCCTATGCAGAGAAACGTACTTGAAGTGTGTGAAATGTTTGGCAGAATATGAGAGATGATGGCTATAACAACATTGTACATATTCTGTTTGCAGATACTTGGTTGTATCGATTGTCATGTTGTTATGTATGTTGCTTTTCTGCCTTAGCTGAATGGTTTTTCTGACGTTTCCAAACCCTTCGTATGGGCTCGTCATGCAATTGTATGGTCTGGAGAAGTATTGTCTTA]


>consensus_10023#0 CCCTTCACGCCGTGACCCAGCGATCGACCGGCCGGAATGGATGCGGCGGCGGCGGCGGCG GCGGCGGGAGGAGGAGGAGGGGGAGGCGGTAGCGTCGCGGCGCGGAGCAGCCCGGCGTCC GTGCAGGCCACCAACGACGACGCCGCGGCCAGCAAGCTGTCATGTGTTAATAAAGGATAC ATGAAGGATGATTATGTGCACTTCTTTGTCAGACGAACAACAAAAAGGGCTCCAATAATA AATCGAGGGTACTATGCACGTTGGTCTGTTCTTAGGAAGCTTCTGCATCAGTTCCTCGGT GCTGGAAATGGCAGTAATGATCAAAACCGGAAACAAATATTATCTCTTGGTGCTGGCTTT GACACGACATTCTTCCAGTTGCAGGACGAAGGCATTGCTCCATACCTTTATGTTGAGTTG GATTTCAAGGAGGTAACCAGCAAAAAGGCTGCCATCATTAACCACTATAGTCAAATGAAG GAAAAGTTAGGACCAGAAGCTTCGATATCAATTGAAAAAGGTGAAGTGAGAAGTGCGCAT TACAAGCTCTTTTCTGCTGATATTCGTGACATACCAAAACTTGATTCAGTTATTCAGATG GCTGAAATGGACCCTACAGTGTGTGCTAATTTACTTAGACCCAGCTTCAACCAGTTCTAT TGTTATTTGGGCATCTGATAAGTTCTCCACTGCCATATTTTTCTTATATGAGCAGATCCA TCCAGATGATGCATTTGGAGAGCAAATGATTATAAACCTTGAGAGTAGAGGATGCCCTCT CCTTGGTATAAATGCTACACCAACCCTAAGTCACAAGGAAAATCTTTTTCTTGATCACGG ATGGCAGAGAGCTGTTGCATGGGATATGCTAAAAATATACAATGATTTCATTGACAGTGA AGAAAGACGCAGGATTGAACGATTGGAATTGTTTGATGAGTTCGAAGAGTGGCATATGAT GCAGGAACACTATTGTGTGGCTTATGGAATAAATGATGCCAAGGGCCTGTTTGATGATTT TGGGTTTAAGGACTAGCACTCGTCGTGCTCTTTTTGATATCGAACTGAGACAAATTCAAC TGGGAATTCCTACTGTTTCCTATGCAGAGAAACGTACTTGAAGTGTGTGAAATGTTTGGC AGAATATGAGAGATGATGGCTATAACAACATTGTACATATTCTGTTTGCAGATACTTGGT TGTATCGATTGTCATGTTGTTATGTATGTTGCTTTTCTGCCTTAGCTGAATGGTTTTTCT GACGTTTCCAAACCCTTCGTATGGGCTCGTCATGCAATTGTATGGTCTGGAGAAGTATTG TCTTA



consensusID : consensus_10023#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1296
fasta sequence
                              [CTCGTCTTCCTCTCCCCTTCACGCCGTGACCCAGCGATCGACCGGCCGGAATGGATGCGGCGGCGGCGGCGGCGGCGGCGGGAGGAGGAGGAGGGGGAGGCGGTAGCGTCGCGGCGCGGAGCAGCCCGGCGTCCGTGCAGGCCACCAACGACGACGCCGCGGCCAGCAAGCTGTCATGTGTTAATAAAGGATACATGAAGGATGATTATGTGCACTTCTTTGTCAGACGAACAACAAAAAGGGCTCCAATAATAAATCGAGGGTACTATGCACGTTGGTCTGTTCTTAGGAAGCTTCTGCATCAGTTCCTCGGTGCTGGAAATGGCAGTAATGATCAAAACCGGAAACAAATATTATCTCTTGGTGCTGGCTTTGACACGACATTCTTCCAGTTGCAGGACGAAGGCATTGCTCCATACCTTTATGTTGAGTTGGATTTCAAGGAGGTAACCAGCAAAAAGGCTGCCATCATTAACCACTATAGTCAAATGAAGGAAAAGTTAGGACCAGAAGCTTCGATATCAATTGAAAAAGGTGAAGTGAGAAGTGCGCATTACAAGCTCTTTTCTGCTGATATTCGTGACATACCAAAACTTGATTCAGTTATTCAGATGGCTGAAATGGACCCTACCTTGCCGACCTTTATAATTGCAGAGTGTGTGCTAATTTACTTAGACCCAGCTTCAACCAGTTCTATTGTTATTTGGGCATCTGATAAGTTCTCCACTGCCATATTTTTCTTATATGAGCAGATCCATCCAGATGATGCATTTGGAGAGCAAATGATTATAAACCTTGAGAGTAGAGGATGCCCTCTCCTTGGTATAAATGCTACACCAACCCTAAGTCACAAGGAAAATCTTTTTCTTGATCACGGATGGCAGAGAGCTGTTGCAT-GGGATATGCTAAAAATATACAATGATTTCATTGACAGTGAAGAAAGACGCAGGATTGAACGATTGGAATTGTTTGATGAGTTCGAAGAGTGGCATATGATGCANGAACACTATTGTG--TGGCTTATGGAATAAATGATG-CCAAGGGCCT-GTTTGATGATTTT-GGGTTT---AAGGACT-AGCACT-CGTCGTGCTC-TTTTTGATATCGAACT-GAGACAAATTCAACT-GGGAATTCCTACTGTTTCCTATGCAGAGAAACGTACTTGAAGTGTGTGAAATGTTTGGCAGAATATGAGAGATGATGGCTATAACAACATTGTACATATTCTGTTTGCAGATACTTGGTTGTATCGATTGTCATGTTGTTATGTATGTTGCTTTTCTGCCTTAGCTGAATGGTTTTTC]

[+] EMBL AK063371             [CTCGTCTTCCTCTCCCCTTCACGCCGTGACCCAGCGATCGACCGGCCGGAATGGATGCGGCGGCGGCGGCGGCGGCGGCGGGAGGAGGAGGAGGGGGAGGCGGTAGCGTCGCGGCGCGGAGCAGCCCGGCGTCCGTGCAGGCCACCAACGACGACGCCGCGGCCAGCAAGCTGTCATGTGTTAATAAAGGATACATGAAGGATGATTATGTGCACTTCTTTGTCAGACGAACAACAAAAAGGGCTCCAATAATAAATCGAGGGTACTATGCACGTTGGTCTGTTCTTAGGAAGCTTCTGCATCAGTTCCTCGGTGCTGGAAATGGCAGTAATGATCAAAACCGGAAACAAATATTATCTCTTGGTGCTGGCTTTGACACGACATTCTTCCAGTTGCAGGACGAAGGCATTGCTCCATACCTTTATGTTGAGTTGGATTTCAAGGAGGTAACCAGCAAAAAGGCTGCCATCATTAACCACTATAGTCAAATGAAGGAAAAGTTAGGACCAGAAGCTTCGATATCAATTGAAAAAGGTGAAGTGAGAAGTGCGCATTACAAGCTCTTTTCTGCTGATATTCGTGACATACCAAAACTTGATTCAGTTATTCAGATGGCTGAAATGGACCCTACCTTGCCGACCTTTATAATTGCAGAGTGTGTGCTAATTTACTTAGACCCAGCTTCAACCAGTTCTATTGTTATTTGGGCATCTGATAAGTTCTCCACTGCCATATTTTTCTTATATGAGCAGATCCATCCAGATGATGCATTTGGAGAGCAAATGATTATAAACCTTGAGAGTAGAGGATGCCCTCTCCTTGGTATAAATGCTACACCAACCCTAAGTCACAAGGAAAATCTTTTTCTTGATCACGGATGGCAGAGAGCTGTTGCAT GGGATATGCTAAAAATATACAATGATTTCATTGACAGTGAAGAAAGACGCAGGATTGAACGATTGGAATTGTTTGATGAGTTCGAAGAGTGGCATATGATGCAGGAACACTATTGTG  TGGCTTATGGAATAAATGATG CCAAGGGCCT GTTTGATGATTTT GGGTTT   AAGGACT AGCACT CGTCGTGCTC TTTTTGATATCGAACT GAGACAAATTCAACT GGGAATTCCTACTGTTTCCTATGCAGAGAAACGTACTTGAAGTGTGTGAAATGTTTGGCAGAATATGAGAGATGATGGCTATAACAACATTGTACATATTCTGTTTGCAGATACTTGGTTGTATCGATTGTCATGTTGTTATGTATGTTGCTTTTCTGCCTTAGCTGAATGGTTTTTC]
[+] EMBL OSR29641A            [           CTCCCCTTCACGCCGTGACCCAGCGATCGACCGGCCGGAATGGATGCGGCGGCGGCGGCGGCGGCGGCGGGAGGAGGAGGAGGGGGAGGCGGTAGCGTCGCGGCGCGGAGCAGCCCGGCGTCCGTGCAGGCCACCAACGACGACGCCGCGGCCAGCAAGCTGTCATGTGTTAATAAAGGATACATGAAGGATGATTATGTGCACTTCTTTGTCAGACGAACAACAAAAAGGGCTCCAATAATAAATCGAGGGTACTATGCACGTTGGTCTGTTCTTAGGAAGCTTCTGCATCAGTTCCTCGGTGCTGGAAATGGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB670237             [                                                                                                                                                                                                                                                                                          TTCTTAGCAATCTTCTGCATCAGTTCCTCGGTGCTGGAAATGGCAGTAATGATCAAAACCGGAAACAAATATTATCTCTTGGTGCTGGCTTTGACACGACATTCTTCCAGTTGCAGGACGAAGGCATTGCTCCATACCTTTATGTTGAGTTGGATTTCAAGGAGGTAACCAGCAAAAAGGCTGCCATCATTAACCACTATAGTCAAATGAAGGAAAAGTTAGGACCAGAAGCTTCGATATCAATTGAAAAAGGTGAAGTGAGAAGTGCGCATTACAAGCTCTTTTCTGCTGATATTCGTGACATACCAAAACTTGATTCAGTTATTCAGATGGCTGAAATGGACCCTACCTTGCCGACCTTTATAATTGCAGAGTGTGTGCTAATTTACTTAGACCCAGCTTCAACCAGTTCTATTGTTATTTGGGCATCTGATAAGTTCTCCACTGCCATATTTTTCTTATATGAGCAGATCCATCCAGATGATGCATTTGGAGAGCAAATGATTATAAACCTTGAGAGTAGAGGATGCCCTCTCCTTGGTATAAATGCTACACCAACCCTAAGTCACAAGGAAAATCTTTTTCTTGATCACGGATGGCAGAGAGCTGTTGCAT GGGATATGCTAAAAATATACAATGATTTCATTGACAGTGAAGAAAGACGCAGGATTGAACGATTGGAATTGTTTGATGAGTTCGAAGAGTGGCATATGATGCANGAACACTATTGTG  TGGCTTATGG                                                                                                                                                                                                                                                                                           ]
[+] EMBL CA767343             [                                                                                                                                                                                                                                                                                              ggGGAAGCTTCTGCANNAGTTNCTNGGGGCTGGAAATGGCAGTAATGATCAAAACCGGAAACAAATATTATCTCTTGGTGCTGGCTTTGACACGACATTCTTCCAGTTGCAGGACGAAGGCATTGCTCCATACCTTTATGTTGAGTTGGATTTCAAGGAGGTAACCAGCAAAAAGGCNGGNATCATTAACCACTATAGTCAAATGAAGGAAAAGTTAGGACCAGAAGCTTCGATATCAATTGAAAAAGGTGAAGTGAGAAGTGCGCATTACAAGCTCTTTTCTGCTGATATTCGTGATATACCAAAACTTGATTCAGTTATTCAGATGGCTGAAATGGACCCTACCTTGCCGACCTTTATAATTGCAGAGTGTGTGCTAATTTACTTAGACCCAGCTTCAACCAGTTCTATTGTTATTTGGGCATCTGATAAGTTCTCCACTGCCATCTTTTTCTTATATGAGCAGATCCATCCAGATGATGCATTTGGAGAGCAAATGATTATAAACCTTGAGAGTAGAGGATGCCCTCTCCTTGGTATAAATGCTACACCAACCCTAAGTCACAAGGAAAATCTTTTTCTTGATCACGGATGGCANAGAGCTGTTGCATGGGGATATGCTAAAAATATACAATGATTTCATTGACAGNGAANAAAGACGCAGGATTGAACGATTGGAATTGTTTGATGAGNTCNAAGAGNGGCATATGATGCANGAACACTATTGGGGNGGGCTTATGGNANAAATGATGTCNAAGGGCCTGGNTTGATGATTTTGGGGTTTAAAAAGGACTAAACACTCCGGCGGGCTCNTTTTTGATATCGAACTGGGGACAAATTCAACTGGGGAATTCCTACTGGTTC                                                                                                                                                                ]


>consensus_10023#1 CTCGTCTTCCTCTCCCCTTCACGCCGTGACCCAGCGATCGACCGGCCGGAATGGATGCGG CGGCGGCGGCGGCGGCGGCGGGAGGAGGAGGAGGGGGAGGCGGTAGCGTCGCGGCGCGGA GCAGCCCGGCGTCCGTGCAGGCCACCAACGACGACGCCGCGGCCAGCAAGCTGTCATGTG TTAATAAAGGATACATGAAGGATGATTATGTGCACTTCTTTGTCAGACGAACAACAAAAA GGGCTCCAATAATAAATCGAGGGTACTATGCACGTTGGTCTGTTCTTAGGAAGCTTCTGC ATCAGTTCCTCGGTGCTGGAAATGGCAGTAATGATCAAAACCGGAAACAAATATTATCTC TTGGTGCTGGCTTTGACACGACATTCTTCCAGTTGCAGGACGAAGGCATTGCTCCATACC TTTATGTTGAGTTGGATTTCAAGGAGGTAACCAGCAAAAAGGCTGCCATCATTAACCACT ATAGTCAAATGAAGGAAAAGTTAGGACCAGAAGCTTCGATATCAATTGAAAAAGGTGAAG TGAGAAGTGCGCATTACAAGCTCTTTTCTGCTGATATTCGTGACATACCAAAACTTGATT CAGTTATTCAGATGGCTGAAATGGACCCTACCTTGCCGACCTTTATAATTGCAGAGTGTG TGCTAATTTACTTAGACCCAGCTTCAACCAGTTCTATTGTTATTTGGGCATCTGATAAGT TCTCCACTGCCATATTTTTCTTATATGAGCAGATCCATCCAGATGATGCATTTGGAGAGC AAATGATTATAAACCTTGAGAGTAGAGGATGCCCTCTCCTTGGTATAAATGCTACACCAA CCCTAAGTCACAAGGAAAATCTTTTTCTTGATCACGGATGGCAGAGAGCTGTTGCATGGG ATATGCTAAAAATATACAATGATTTCATTGACAGTGAAGAAAGACGCAGGATTGAACGAT TGGAATTGTTTGATGAGTTCGAAGAGTGGCATATGATGCANGAACACTATTGTGTGGCTT ATGGAATAAATGATGCCAAGGGCCTGTTTGATGATTTTGGGTTTAAGGACTAGCACTCGT CGTGCTCTTTTTGATATCGAACTGAGACAAATTCAACTGGGAATTCCTACTGTTTCCTAT GCAGAGAAACGTACTTGAAGTGTGTGAAATGTTTGGCAGAATATGAGAGATGATGGCTAT AACAACATTGTACATATTCTGTTTGCAGATACTTGGTTGTATCGATTGTCATGTTGTTAT GTATGTTGCTTTTCTGCCTTAGCTGAATGGTTTTTC



consensusID : consensus_10023#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 558
fasta sequence
                              [GACGAGACAAGGGGATATGCTAAAAATATACAATGATTTCATTGACAGTGAAGAAAGACGCAGGATTGAACGATNGGAATTGTTTGATGAGTTCGAAGAGTGGCATATGATGCAGGAACACTATTGTGTGGCTTATGGAATAAATGATGCCAAGGGCCTGTTTGATGATTTTGGGTTTAAGAAGGACTAGCACTCGTCGTGCTCTTTTTGATATCGAACTGAGACAAATTCAACTGGGAATTCCTACTGTTTCCTATGCAGAGAAACGTACTTGAAGTGTGTGAAATGTTTGGCAGAATTTGAGAGATGATGGCTATAACAACATTGTACATATTCTGTTTGCAGATACTTGGTTGTATCGATTGTCATGTTGTTATGTATGTTGCTTTTCTGCCTTAGCTGAATGGTTTTTCTGACGTTTCCAAACCCTTTGTATGGGCTCGTCATGCAATTGTATGGTCTGGAGAAGTATTGTCTTACCGTTCAGGCGTTTTATCTGTCTTTGGTTTTATCTCTGCTTGTTCAATAATACAGCTTATCCGAGTAAAAAAAAAAAAA]

[-] EMBL CA763366             [GACGAGACAAGGGGATATGCTAAAAATATACAATGATTTCATTGACAGTGAAGAAAGACGCAGGATTGAACGATNGGAATTGTTTGATGAGTTCGAAGAGTGGCATATGATGCAGGAACACTATTGTGTGGCTTATGGAATAAATGATGCCAAGGGCCTGTTTGATGATTTTGGGTTTAAGAAGGACTAGCACTCGTCGTGCTCTTTTTGATATCGAACTGAGACAAATTCAACTGGGAATTCCTACTGTTTCCTATGCAGAGAAACGTACTTGAAGTGTGTGAAATGTTTGGCAGAATTTGAGAGATGATGGCTATAACAACATTGTACATATTCTGTTTGCAGATACTTGGTTGTATCGATTGTCATGTTGTTATGTATGTTGCTTTTCTGCCTTAGCTGAATGGTTTTTCTGACGTTTCCAAACCCTTTGTATGGGCTCGTCATGCAATTGTATGGTCTGGAGAAGTATTGTCTTACCGTTCAGGCGTTTTATCTGTCTTTGGTTTTATCTCTGCTTGTTCAATAATACAGCTTATCCGAGTAAAAAAAAAAAAA]


>consensus_10023#2 GACGAGACAAGGGGATATGCTAAAAATATACAATGATTTCATTGACAGTGAAGAAAGACG CAGGATTGAACGATNGGAATTGTTTGATGAGTTCGAAGAGTGGCATATGATGCAGGAACA CTATTGTGTGGCTTATGGAATAAATGATGCCAAGGGCCTGTTTGATGATTTTGGGTTTAA GAAGGACTAGCACTCGTCGTGCTCTTTTTGATATCGAACTGAGACAAATTCAACTGGGAA TTCCTACTGTTTCCTATGCAGAGAAACGTACTTGAAGTGTGTGAAATGTTTGGCAGAATT TGAGAGATGATGGCTATAACAACATTGTACATATTCTGTTTGCAGATACTTGGTTGTATC GATTGTCATGTTGTTATGTATGTTGCTTTTCTGCCTTAGCTGAATGGTTTTTCTGACGTT TCCAAACCCTTTGTATGGGCTCGTCATGCAATTGTATGGTCTGGAGAAGTATTGTCTTAC CGTTCAGGCGTTTTATCTGTCTTTGGTTTTATCTCTGCTTGTTCAATAATACAGCTTATC CGAGTAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10023#0      --------------CCCTTCACGCCGTGACCCAGCGATCGACCGGCCGGAATGGATGCGG 46
consensus_10023#1      CTCGTCTTCCTCTCCCCTTCACGCCGTGACCCAGCGATCGACCGGCCGGAATGGATGCGG 60
consensus_10023#2      ------------------------------------------------------------
                                                                                   

consensus_10023#0      CGGCGGCGGCGGCGGCGGCGGGAGGAGGAGGAGGGGGAGGCGGTAGCGTCGCGGCGCGGA 106
consensus_10023#1      CGGCGGCGGCGGCGGCGGCGGGAGGAGGAGGAGGGGGAGGCGGTAGCGTCGCGGCGCGGA 120
consensus_10023#2      ------------------------------------------------------------
                                                                                   

consensus_10023#0      GCAGCCCGGCGTCCGTGCAGGCCACCAACGACGACGCCGCGGCCAGCAAGCTGTCATGTG 166
consensus_10023#1      GCAGCCCGGCGTCCGTGCAGGCCACCAACGACGACGCCGCGGCCAGCAAGCTGTCATGTG 180
consensus_10023#2      ------------------------------------------------------------
                                                                                   

consensus_10023#0      TTAATAAAGGATACATGAAGGATGATTATGTGCACTTCTTTGTCAGACGAACAACAAAAA 226
consensus_10023#1      TTAATAAAGGATACATGAAGGATGATTATGTGCACTTCTTTGTCAGACGAACAACAAAAA 240
consensus_10023#2      ------------------------------------------------------------
                                                                                   

consensus_10023#0      GGGCTCCAATAATAAATCGAGGGTACTATGCACGTTGGTCTGTTCTTAGGAAGCTTCTGC 286
consensus_10023#1      GGGCTCCAATAATAAATCGAGGGTACTATGCACGTTGGTCTGTTCTTAGGAAGCTTCTGC 300
consensus_10023#2      ------------------------------------------------------------
                                                                                   

consensus_10023#0      ATCAGTTCCTCGGTGCTGGAAATGGCAGTAATGATCAAAACCGGAAACAAATATTATCTC 346
consensus_10023#1      ATCAGTTCCTCGGTGCTGGAAATGGCAGTAATGATCAAAACCGGAAACAAATATTATCTC 360
consensus_10023#2      ------------------------------------------------------------
                                                                                   

consensus_10023#0      TTGGTGCTGGCTTTGACACGACATTCTTCCAGTTGCAGGACGAAGGCATTGCTCCATACC 406
consensus_10023#1      TTGGTGCTGGCTTTGACACGACATTCTTCCAGTTGCAGGACGAAGGCATTGCTCCATACC 420
consensus_10023#2      ------------------------------------------------------------
                                                                                   

consensus_10023#0      TTTATGTTGAGTTGGATTTCAAGGAGGTAACCAGCAAAAAGGCTGCCATCATTAACCACT 466
consensus_10023#1      TTTATGTTGAGTTGGATTTCAAGGAGGTAACCAGCAAAAAGGCTGCCATCATTAACCACT 480
consensus_10023#2      ------------------------------------------------------------
                                                                                   

consensus_10023#0      ATAGTCAAATGAAGGAAAAGTTAGGACCAGAAGCTTCGATATCAATTGAAAAAGGTGAAG 526
consensus_10023#1      ATAGTCAAATGAAGGAAAAGTTAGGACCAGAAGCTTCGATATCAATTGAAAAAGGTGAAG 540
consensus_10023#2      ------------------------------------------------------------
                                                                                   

consensus_10023#0      TGAGAAGTGCGCATTACAAGCTCTTTTCTGCTGATATTCGTGACATACCAAAACTTGATT 586
consensus_10023#1      TGAGAAGTGCGCATTACAAGCTCTTTTCTGCTGATATTCGTGACATACCAAAACTTGATT 600
consensus_10023#2      ------------------------------------------------------------
                                                                                   

consensus_10023#0      CAGTTATTCAGATGGCTGAAATGGACCCTAC-----------------------AGTGTG 623
consensus_10023#1      CAGTTATTCAGATGGCTGAAATGGACCCTACCTTGCCGACCTTTATAATTGCAGAGTGTG 660
consensus_10023#2      ------------------------------------------------------------
                                                                                   

consensus_10023#0      TGCTAATTTACTTAGACCCAGCTTCAACCAGTTCTATTGTTATTTGGGCATCTGATAAGT 683
consensus_10023#1      TGCTAATTTACTTAGACCCAGCTTCAACCAGTTCTATTGTTATTTGGGCATCTGATAAGT 720
consensus_10023#2      ------------------------------------------------------------
                                                                                   

consensus_10023#0      TCTCCACTGCCATATTTTTCTTATATGAGCAGATCCATCCAGATGATGCATTTGGAGAGC 743
consensus_10023#1      TCTCCACTGCCATATTTTTCTTATATGAGCAGATCCATCCAGATGATGCATTTGGAGAGC 780
consensus_10023#2      ------------------------------------------------------------
                                                                                   

consensus_10023#0      AAATGATTATAAACCTTGAGAGTAGAGGATGCCCTCTCCTTGGTATAAATGCTACACCAA 803
consensus_10023#1      AAATGATTATAAACCTTGAGAGTAGAGGATGCCCTCTCCTTGGTATAAATGCTACACCAA 840
consensus_10023#2      ------------------------------------------------------------
                                                                                   

consensus_10023#0      CCCTAAGTCACAAGGAAAATCTTTTTCTTGATCACGGATGGCAGAGAGCTGTTGCATGGG 863
consensus_10023#1      CCCTAAGTCACAAGGAAAATCTTTTTCTTGATCACGGATGGCAGAGAGCTGTTGCATGGG 900
consensus_10023#2      ----------------------------------------------GACGAGACAAGGGG 14
                                                                       *      * ***

consensus_10023#0      ATATGCTAAAAATATACAATGATTTCATTGACAGTGAAGAAAGACGCAGGATTGAACGAT 923
consensus_10023#1      ATATGCTAAAAATATACAATGATTTCATTGACAGTGAAGAAAGACGCAGGATTGAACGAT 960
consensus_10023#2      ATATGCTAAAAATATACAATGATTTCATTGACAGTGAAGAAAGACGCAGGATTGAACGAT 74
                       ************************************************************

consensus_10023#0      TGGAATTGTTTGATGAGTTCGAAGAGTGGCATATGATGCAGGAACACTATTGTGTGGCTT 983
consensus_10023#1      TGGAATTGTTTGATGAGTTCGAAGAGTGGCATATGATGCANGAACACTATTGTGTGGCTT 1020
consensus_10023#2      NGGAATTGTTTGATGAGTTCGAAGAGTGGCATATGATGCAGGAACACTATTGTGTGGCTT 134
                        *************************************** *******************

consensus_10023#0      ATGGAATAAATGATGCCAAGGGCCTGTTTGATGATTTTGGGTTTAAG---GACTAGCACT 1040
consensus_10023#1      ATGGAATAAATGATGCCAAGGGCCTGTTTGATGATTTTGGGTTTAAG---GACTAGCACT 1077
consensus_10023#2      ATGGAATAAATGATGCCAAGGGCCTGTTTGATGATTTTGGGTTTAAGAAGGACTAGCACT 194
                       ***********************************************   **********

consensus_10023#0      CGTCGTGCTCTTTTTGATATCGAACTGAGACAAATTCAACTGGGAATTCCTACTGTTTCC 1100
consensus_10023#1      CGTCGTGCTCTTTTTGATATCGAACTGAGACAAATTCAACTGGGAATTCCTACTGTTTCC 1137
consensus_10023#2      CGTCGTGCTCTTTTTGATATCGAACTGAGACAAATTCAACTGGGAATTCCTACTGTTTCC 254
                       ************************************************************

consensus_10023#0      TATGCAGAGAAACGTACTTGAAGTGTGTGAAATGTTTGGCAGAATATGAGAGATGATGGC 1160
consensus_10023#1      TATGCAGAGAAACGTACTTGAAGTGTGTGAAATGTTTGGCAGAATATGAGAGATGATGGC 1197
consensus_10023#2      TATGCAGAGAAACGTACTTGAAGTGTGTGAAATGTTTGGCAGAATTTGAGAGATGATGGC 314
                       ********************************************* **************

consensus_10023#0      TATAACAACATTGTACATATTCTGTTTGCAGATACTTGGTTGTATCGATTGTCATGTTGT 1220
consensus_10023#1      TATAACAACATTGTACATATTCTGTTTGCAGATACTTGGTTGTATCGATTGTCATGTTGT 1257
consensus_10023#2      TATAACAACATTGTACATATTCTGTTTGCAGATACTTGGTTGTATCGATTGTCATGTTGT 374
                       ************************************************************

consensus_10023#0      TATGTATGTTGCTTTTCTGCCTTAGCTGAATGGTTTTTCTGACGTTTCCAAACCCTTCGT 1280
consensus_10023#1      TATGTATGTTGCTTTTCTGCCTTAGCTGAATGGTTTTTC--------------------- 1296
consensus_10023#2      TATGTATGTTGCTTTTCTGCCTTAGCTGAATGGTTTTTCTGACGTTTCCAAACCCTTTGT 434
                       ***************************************                     

consensus_10023#0      ATGGGCTCGTCATGCAATTGTATGGTCTGGAGAAGTATTGTCTTA--------------- 1325
consensus_10023#1      ------------------------------------------------------------
consensus_10023#2      ATGGGCTCGTCATGCAATTGTATGGTCTGGAGAAGTATTGTCTTACCGTTCAGGCGTTTT 494
                                                                                   

consensus_10023#0      ------------------------------------------------------------
consensus_10023#1      ------------------------------------------------------------
consensus_10023#2      ATCTGTCTTTGGTTTTATCTCTGCTTGTTCAATAATACAGCTTATCCGAGTAAAAAAAAA 554
                                                                                   

consensus_10023#0      ----
consensus_10023#1      ----
consensus_10023#2      AAAA 558
                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)