These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10025#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1192 fasta sequence [AGCACTTCTTCCCCCGGCCCAAGGCCGCCGCCCCACGCAACACCACCTCCTTCATCATCCGTGCCAAGCGCGCCGGTGGCATCGCCTCCCTCGTCTCCCCCTCCCCTGTTACCCCCGCCGTTCTCCCCACCCCACGCCTCTCCCCCTCCCGCGAGGGCCTCTCCGACATGGCTCAGGCGCAGTGGGGCGTCGATGGCTATGGCTCCATGAAGGGCCTCATCCGCCTCCGCACCTCCCCTCACCCCGCCAACCCCTCCGATGACGACGATGATGCCAACTCCAGCGGCAGTGACGTCGAGGAGCATGTCGAGGTGGAGCGCCGCCTCGACCACGATCTCAGCAGGTTTGAGATGGTCTACCCTGCCAGGGGTGACGGTGTCTTCTTCGAGGAGGAGGATGACTATGAGTATGACCAGGAAGCCCATGTGGCTCGCCTCGAGGAGGAGAACCTCACCTTGAAGGAGAGGCTCTTTTTGATGGAGCAGGAGCTTGGCGACATGAGGCGCCGCCTGGAGGCAC-TCGAG-TC-GCGT-TTTGCAGGGACTGATGGTATGCCTATTGAGAATTCAGATGC-AGTTGCAGTTGA-CCATGACAAGGAGATGGCTCATCCCATA-CTTGTTCAGAGGGATGATCT-TAGGACTGAGATTGCTGCTGATGCAGCAGGGTCAGACAAGGCTAGTGCACAAGACAATGCAGAGGAGGTTGCTGATGCAGCAGTGTCAGAGAAGATCGTGCAAGACAATGCAGATGTTGTAGTTG-CAGGGTCAGAGAGGACTGGCGAAGAGATCGGGGTTGATGCTTCGGAGATGGATTGATGGGAGATGGACACTGGAATGCAATAGCGGTTATCAGTACTGTACATACATAATTGTCGATGACAGATTGAGGCCGCGTGATGTGGACTTGTTTTGGGAGGCTTACAATTGTAT-GTTGTCGCATAACAAGTGGATCATCGTATTTACAATGTAATATGT-TTCTACCATTCTGTGCTATCTTTGGTGTTTCTTTGCGTATTTGTTATGATGATACCACACAGCACAACTTGTAGTAGTTCTTACCTTCTGCTGCTGCTGCTGAAAGAGGTAGAAGCGACTAGATGAATTTGTTACTACATCAACTATTAATGTCATTATAATGGTATCAGATGGTGTCATGAACCTGTTACTTAATTATAGATAGCACTCATGAAGCTATT] [+] EMBL AK058645 [AGCACTTCTTCCCCCGGCCCAAGGCCGCCGCCCCACGCAACACCACCTCCTTCATCATCCGTGCCAAGCGCGCCGGTGGCATCGCCTCCCTCGTCTCCCCCTCCCCTGTTACCCCCGCCGTTCTCCCCACCCCACGCCTCTCCCCCTCCCGCGAGGGCCTCTCCGACATGGCTCAGGCGCAGTGGGGCGTCGATGGCTATGGCTCCATGAAGGGCCTCATCCGCCTCCGCACCTCCCCTCACCCCGCCAACCCCTCCGATGACGACGATGATGCCAACTCCAGCAGCAGTGACGTCGAGGAGCATGTCGAGGTGGAGCGCCGCCTCGACCACGATCTCAGCAGGTTTGAGATGGTCTACCCTGCCAGGGGTGACGGTGTCTTCTTCGAGGAGGAGGATGACTATGAGTATGACCAGGAAGCCCATGTGGCTCGCCTCGAGGAGGAGAACCTCACCTTGAAGGAGAGGCTCTTTTTGATGGAGCAGGAGCTTGGCGACATGAGGCGCCGCCTGGAGGCAC TCGAG TC GCGT TTTGCAGGGACTGATGGTATGCCTATTGAGAATTCAGATGC AGTTGCAGTTGA CCATGACAAGGAGATGGCTCATCCCATA CTTGTTCAGAGGGATGATCT TAGGACTGAGATTGCTGCTGATGCAGCAGGGTCAGACAAGGCTAGTGCACAAGACAATGCAGAGGAGGTTGCTGATGCAGCAGTGTCAGAGAAGATCGTGCAAGACAATGCAGATGTTGTAGTTG CAGGGTCAGAGAGGACTGGCGAAGAGATCGGGGTTGATGCTTCGGAGATGGATTGATGGGAGATGGACACTGGAATGCAATAGCGGTTATCAGTACTGTACATACATAATTGTCGATGACAGATTGAGGCCGCGTGATGTGGACTTGTTTTGGGAGGCTTACAATTGTAT GTTGTCGCATAACAAGTGGATCATCGTATTTACAATGTAATATGT TTCTACCATTCTGTGCTATCTTTGGTGTTTCTTTGCGTATTTGTTATGATGATACCACACAGCACAACTTGTAGTAGTTCTTACCTTCTGCTGCTGCTGCTGAAAGAGGTAGAAGCGACTAGATGAATTTGTTACTACATCAACTATTAATGTCATTATAATGGTATCAGATGGTGTCATGAACCTGTTACTTAATTATAGATAGCACTCATGAAGCTATT] [+] EMBL AK072277 [AGCACTTCTTCCCCCGGCCCAAGGCCGCCGCCCCACGCAACACCACCTCCTTCATCATCCGTGCCAAGCGCGCCGGTGGCATCGCCTCCCTCGTCTCCCCCTCCCCTGTTACCCCCGCCGTTCTCCCCACCCCACGCCTCTCCCCCTCCCGCGAGGGCCTCTCCGACATGGCTCAGGCGCAGTGGGGCGTCGATGGCTATGGCTCCATGAAGGGCCTCATCCGCCTCCGCACCTCCCCTCACCCCGCCAACCCCTCCGATGACGACGATGATGCCAACTCCAGCGGCAGTGACGTCGAGGAGCATGTCGAGGTGGAGCGCCGCCTCGACCACGATCTCAGCAGGTTTGAGATGGTCTACCCTGCCAGGGGTGACGGTGTCTTCTTCGAGGAGGAGGATGACTATGAGTATGACCAGGAAGCCCATGTGGCTCGCCTCGAGGAGGAGAACCTCACCTTGAAGGAGAGGCTCTTTTTGATGGAGCAGGAGCTTGGCGACATGAGGCGCCGCCTGGAGGCAC TCGAG TC GCGT TTTGCAGGGACTGATGGTATGCCTATTGAGAATTCAGATGC AGTTGCAGTTGA CCATGACAAGGAGATGGCTCATCCCATA CTTGTTCAGAGGGATGATCT TAGGACTGAGATTGCTGCTGATGCAGCAGGGTCAGACAAGGCTAGTGCACAAGACAATGCAGAGGAGGTTGCTGATGCAGCAGTGTCAGAGAAGATCGTGCAAGACAATGCAGATGTTGTAGTTG CAGGGTCAGAGAGGACTGGCGAAGAGATCGGGGTTGATGCTTCGGAGATGGATTGATGGGAGATGGACACTGGAATGCAATAGCGGTTATCAGTACTGTACATACATAATTGTCGATGACAGATTGAGGCCGCGTGATGTGGACTTGTTTTGGGAGGCTTACAATTGTAT GTTGTCGCATAACAAGTGGATCATCGTATTTACAATGTAATA ] [+] EMBL AK100140 [AGCACTTCTTCCCCCGGCCCAAGGCCGCCGCCCCACGCAACACCACCTCCTTCATCATCCGTGCCAAGCGCGCCGGTGGCATCGCCTCCCTCGTCTCCCCCTCCCCTGTTACCCCCGCCGTTCTCCCCACCCCACGCCTCTCCCCCTCCCGCGAGGGCCTCTCCGACATGGCTCAGGCGCAGTGGGGCGTCGATGGCTATGGCTCCATGAAGGGCCTCATCCGCCTCCGCACCTCCCCTCACCCCGCCAACCCCTCCGATGACGACGATGATGCCAACTCCAGCGGCAGTGACGTCGAGGAGCATGTCGAGGTGGAGCGCCGCCTCGACCACGATCTCAGCAGGTTTGAGATGGTCTACCCTGCCAGGGGTGACGGTGTCTTCTTCGAGGAGGAGGATGACTATGAGTATGACCAGGAAGCCCATGTGGCTCGCCTCGAGGAGGAGAACCTCACCTTGAAGGAGAGGCTCTTTTTGATGGAGCAGGAGCTTGGCGACATGAGGCGCCGCCTGGAGGCAC TCGAG TC GCGT TTTGCAGGGACTGATGGTATGCCTATTGAGAATTCAGATGC AGTTGCAGTTGA CCATGACAAGGAGATGGCTCATCCCATA CTTGTTCAGAGGGATGATCT TAGGACTGAGATTGCTGCTGATGCAGCAGGGTCAGACAAGGCTAGTGCACAAGACAATGCAGAGGAGGTTGCTGATGCAGCAGTGTCAGAGAAGATCGTGCAAGACAATGCAGATGTTGTAGTTG CAGGGTCAGAGAGGACTGGCGAAGAGATCGGGGTTGATGCTTCGGAGATGGATTGATGGGAGATGGACACTGGAATGCAATAGCGGTTATCAGTACTGTACATACATAATTGTCGATGACAGATTGAGGCCGCGTGATGTGGACTTGTTTTGGGAGGCTTACAATTGTAT GTTGTCGCATAACAAGTGGATCATCGTATTTACAATGTAATA ] [-] EMBL CB673089 [ ATGCCAACTCCAGCGGCAGTGACGTCGAGGAGCATGTGGAGGTGGAGCTCCGCCTCGACCACGATATCAGCAGGTTTGTGATGGTCTACCCTGCCAGGGGTGTCGTTGTCTTCTTGGAGGAGGAGGATGACTATGAGTATGACCAGGAAGCCCATGTGGTTCGCCTGGAGGAGGAGACCCTCACCTTGAAGGTGAGGCTCTTTTTGATGGAGCAGGAGCTTGGCGACATGAGGCGCCGCCTGGAGGCAC TGGAG TC GCGT TTTGCAGGGACTGATGGTATGCCTATTGAGAATTCAGATGC AGTTGCAGTTGA CCATGACAAGGAGATGGCTCATCCCATA CTTGTTCAGAGGGATGATCT TAGGACTGAGATTGCTGCTGATGCAGCAGGGTCAGACAAGGCTAGTGCACAAGACAATGCAGAGGAGGTTGCTGATGCAGCAGTGTCAGAGAAGATCGTGCAAGCCAATGCAGATGTTGTAGTTG CAGGGTCAGAGAGGACTGGCGAAGAGATCGGGGTTGATGCTTCGGAGATGGATTGATGGGAGATGGACACTGGAATGCAATAGCGGTTATCAGTCCTGTACATACATAATTGTCGATGACAGATTGAGGCCGCGTGATGTGGACTTGTTTTGGGAGGCTTACAATTGTAT GTTG ] [-] EMBL CB655274 [ ACTCCAGCGGCAGTGACGTCGAGGAGCATGTCGAGGTGGAGCGCCGCCTCGACCACGATCTCAGCAGGTTTGAGATGGTCTACCCTGCCAGGGGTGACGGTGTCTTTTTCGAGGAGGAGGATGACTATGAGTATGACCAGGAAGCCCATGTGGCTCGCCTCGAGGAGGAGAACCTCACCTTGAAGGAGAGGCTCTTTTTGATGGAGCAGGAGCTTGGCGACATGAGGCGCCGCCTGGAGGCAC TCGAG TC GCGT TTTGCAGGGACTGATGGTATGCCTATTGAGAATTCAGATGC AGTTGCAGTTGA CCATGACAAGGAGATGGCTCATCCCATA CTTGTTCAGAGGGATGATCT TAGGACTGAGATTGCTGCTGATGCAGCAGGGTCAGACAAGGCTAGTGCACAAGACAATGCAGAGGAGGTTGCTGATGCAGCAGTGTCAGAGAAGATCGTGCAAGACAATGCAGATGTTGTAGTTG CAGGGTCAGAGAGGACTGGCGAAGAGATCGGGGTTGATGCTTCGGAGATGGATTGATGGGAGATGGACACTGGAATGCAATAGCGGTTATCAGTACTGTACATACATAATTGTCGATGACAGATTGAGGCCGCGTGATGTGGACTTGTTTTGGGAGGCTTACAATTGTAT GTTGTCGCATAACAAGTGGATCATCGTATTGACAATGTAATATGT TTCTACCATTCTGTGCTAaaaaaaaag ] [-] EMBL CB646155 [ CCAGGAAGCCCATGTGGCTCGCCTCGAGGAGGAGAACCTCACCTTGAAGGAGAGGCTCTTTTTGATGGAGCAGGAGCTTGGCGACATGAGGCGCCGCCTGGAGGCAC TCGAG TC GCGT TTTGCAGGGACTGATGGTATGCCTATTGAGAATTCAGATGC AGTTGCAGTTGA CCATGACAAGGAGATGGCTCATCCCATA CTTGTTCAGAGGGATGATCT TAGGACTGAGATTGCTGCTGATGCAGCAGGGTCAGACAAGGCTAGTGCACAAGACAATGCAGAGGAGGTTGCTGATGCAGCAGTGTCAGAGAAGATCGTGCAAGACAATGCAGATGTTGTAGTTG CAGGGTCAGAGAGGACTGGCGAAGAGATCGGGGTTGATGCTTCGGAGATGGATTGATGGGAGATGGACACTGGAATGCAATAGCGGTTATCAGTACTGTACATACATAATTGTCGATGACAGATTGAGGCCGCGTGATGTGGACTTGTTTTGGGAGGCTTACAATTGTAT GTTGTCGCATAACAAGTGGATCATCGTATTTACAATGTAATATGT TTCTACCATTCTGTGCTATCTTTGGTGTTTCTTTGCGTATTTGTTATGATGATACCACACAGCACAACTTGTAGTAGTTCTTACCTTCTGCTGCTGCTGCTGAAAGAGGTAGAAGCGACTAGATGAATTTGTTACTACATCAACTATTAATGTCCTTTTAAAGGTATCAGA ] [+] EMBL BM421262 [ ccnCTGGAGGCACTTCGAGTTCGGCGTNTTTGCAGGGACTGATGGTATGCCTATTGAGAATTCAGATGCAAGTTGCAGTTGAGCCATGACAAGGAGATGGCTCATCCCATATCTTGTTCAGAGGGATGATCTNTAGGACTGAGATTGCTGCTGATGCAGCAGGGTCAGACAAGGCTAGTGCACAAGACAATGCAGAGGA GTTGCTGATGCAGCAGTGTCAGAGAAGATCGTGCAAGACAATGCAGATGTTGTAGTTGCCAGGGTCAGAGAGGACTGGCGAAGAGATCGGGGTTNATGCTTCGGAGATGGATTGATGGGAGATGGACACTGGAATGCAATAGCGGTTATCAGTACTGTACATACATAATTGTTGATGACAGATTGAGGCCGCGTGATGTGGACTTGTTTTGGGAGGCTTACAATTGTATGGTTGTCGCATAACAAGTGGATCATCGTATTTACAANGTAATATGTGTTCTACCATTCTGTGCTAaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||