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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10033#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2278 fasta sequence
[AATCTTCTTCCCCTCAACCCGCTCCAAAATTCCCCCGCCTCCCACTCCAAAACCCAAAAAAATCCCGCGCGGCCGCGTGAAGCCGTGAATCTACTCCTCCCTTCCTCCGCGCCCGCGCGTCGCCATGAATCCGCAGGCGGAGGGCGATGCGGCGGCGGCGGCGGCGGTGCTGGGGGCGGACCCGGCGGGGCTGACGGCGCTGCTGGGGGACCTGACGTCGCCGGCGAACGAGGCGAGGTCGAGGGCGGAGGGGATGTTCCACGCGCTCAGGGCGTCCCACCCGGACGCGCTCGCGCTCCGCCTCGCGCACCTGCTGCTCTCCCCGGCGCACCCCTCCGCGCCCATGGCGGCCGTGCTCCTGCGCCGCCTCATCTCCCCGGGGTCGCAGGCGTTCGTCTACCCGGGGCTCTCCCCCGCCACGCAGTCCTCGCTCCGCGCGCTCCTCCTCTCCGCGGCGTCCGCGACGGGGCTCTCCAAGTCCATCTCGAAGAAGCTCTCCGACGCCGTCGCCGAGCTCGCGTCCTTCCTGCTGCCGTCCAACGCGTGGCCCGACCTCCTCACCTTCCTCTACAAGTCCATCGCCTCCCCATCCTCGCCTCCGGCGCTGCAGGAGTCGGCGCTCAACATCCTAGCCCGGCTGGCCTCCCATCTCGCCGCGGGCTTCCCCAACCTCCACGCCCTCCTCCTCTCCGCGCTCTCGCACCCGTCGTCCGCAGATGTCCGCGTCGCGGGGCTCAACGCCGCTATCAGCCTCATACAGTCTCTCCCCTCTGCCGCCGACCGTGACCAGTTTCAGGATCTCCTCCCAGCCATGATGCGCGCCCTCGCTGAATCGCTCAACTGTGGGAACGAGGGCTCTGCACAGGAGGCGCTTGAGATGATGATCGAGCTTGCAGGTGCAGAACCACGGTTTCTCCGCCGCCAGCTGCCTGACGTGGTTGGTTCTATGTTGCAAATTGCTGAAGCCCCTGGATTAGAGGATGGTACGCGACACCTTGCTGTCGAGTTTGTTGTTACCCTTGCTGAGGCAAGGGAGCGCGCGCCCGGGATGATGAGAAAGCTGCCACGGTATGTGGGCCGGCTATTTGCGGTGCTCATGACAATGCTGCTCGATGTCCAGGATGAACCTGCGTGGCATGCAGCGGTGTCGGAAGAAGAGGATGCTGGGGAGACTGGGAGCTATGTTTTCGCACAGGAATGTCTTGATCGGCTTGCGATTGCTGTTGGTGGGAATACGATTTTACCTGTGGCAGCTGAGTTGCTCCCATCATTTTTTGCTTCTGAAGAGTGGAAGAGACGACATGCGGCACTGGTTACGATAGCGCAGATTGCAGAGGGCTGTGCTAGAGTAATGATTAAGAATCTGGAGCAGGTAGTTGGTATGGTGCTGAATTCCTTCCGGGATCCTTATCCTCGGGTGAGATGGGCAGCTATCAATGCAATTGGGCAGCTTTCGACGGACCTGGGGCCTGAGTTGCAAAATAAACTGCACCATGTTGTCCTGCCTGCATTGGCTTCATCCATGGATGATTTCCAGAACCCGCGCGTACAGGCACACGCAGCTTCTGCGA-TTCTAAACTTCAGCGAAAACTGCAGGCCTGATATTTTGACACCATACTTGGATGGGATAGTTGGGAAACTACTGTCATTGCTTCAGACTGGAAACCAAATGGTGCAAGAAGGTGCTTTAACTGCTTTAGCATCAGCTGCAGATTCTTCTCAGGAACACTTCCAAAAATATTATGATGCAGTCATGCCATATCTCAAGTCTATACTCAT-GAATGCAAC-TGACAAATCAAATA-GAATGTTGCGGGCCAAATCGATGGAATGCATTAGCTTAGTTGGTATGGCTGTTGGAAAGCAAAAATTTAAGGATGATGCTAAGCAGGTGATGGAAGTTTTGATGACATTGCAAGGATCTCAGATGGAGGCTGATGACCCTATAACAAGTTACATGCTGCAAGCATGGGCGAGATTGTGTAAATGCCTTGGTCAGGACTTCTTACCATACATGAATGTTGTTATGCCTCCTCTGCTCCAGTCTGCTCAGCTTAAACCAGATGTGAGTGTCACATCTGCTGGGCCAGAAGATGAAAATGGTGAATCTGATGATGAGGGTGTTGAGACTATTACGCTAGGAGACAAGAGAATTGGCATCCGAACCAGTCTGCTGGAGGAAAAAGCAACGGCATGTAATATGCTATGTTGTTATGCTGATGAGCTCAAGGAAGGGTTTTTCCCATGGATTGATCAGGTTGCAACTACTCTGGTTCCTCTC]
[+] EMBL AK068293 [AATCTTCTTCCCCTCAACCCGCTCCAAAATTCCCCCGCCTCCCACTCCAAAACCCAAAAAAATCCCGCGCGGCCGCGTGAAGCCGTGAATCTACTCCTCCCTTCCTCCGCGCCCGCGCGTCGCCATGAATCCGCAGGCGGAGGGCGATGCGGCGGCGGCGGCGGCGGTGCTGGGGGCGGACCCGGCGGGGCTGACGGCGCTGCTGGGGGACCTGACGTCGCCGGCGAACGAGGCGAGGTCGAGGGCGGAGGGGATGTTCCACGCGCTCAGGGCGTCCCACCCGGACGCGCTCGCGCTCCGCCTCGCGCACCTGCTGCTCTCCCCGGCGCACCCCTCCGCGCCCATGGCGGCCGTGCTCCTGCGCCGCCTCATCTCCCCGGGGTCGCAGGCGTTCGTCTACCCGGGGCTCTCCCCCGCCACGCAGTCCTCGCTCCGCGCGCTCCTCCTCTCCGCGGCGTCCGCGACGGGGCTCTCCAAGTCCATCTCGAAGAAGCTCTCCGACGCCGTCGCCGAGCTCGCGTCCTTCCTGCTGCCGTCCAACGCGTGGCCCGACCTCCTCACCTTCCTCTACAAGTCCATCGCCTCCCCATCCTCGCCTCCGGCGCTGCAGGAGTCGGCGCTCAACATCCTAGCCCGGCTGGCCTCCCATCTCGCCGCGGGCTTCCCCAACCTCCACGCCCTCCTCCTCTCCGCGCTCTCGCACCCGTCGTCCGCAGATGTCCGCGTCGCGGGGCTCAACGCCGCTATCAGCCTCATACAGTCTCTCCCCTCTGCCGCCGACCGTGACCAGTTTCAGGATCTCCTCCCAGCCATGATGCGCGCCCTCGCTGAATCGCTCAACTGTGGGAACGAGGGCTCTGCACAGGAGGCGCTTGAGATGATGATCGAGCTTGCAGGTGCAGAACCACGGTTTCTCCGCCGCCAGCTGCCTGACGTGGTTGGTTCTATGTTGCAAATTGCTGAAGCCCCTGGATTAGAGGATGGTACGCGACACCTTGCTGTCGAGTTTGTTGTTACCCTTGCTGAGGCAAGGGAGCGCGCGCCCGGGATGATGAGAAAGCTGCCACGGTATGTGGGCCGGCTATTTGCGGTGCTCATGACAATGCTGCTCGATGTCCAGGATGAACCTGCGTGGCATGCAGCGGTGTCGGAAGAAGAGGATGCTGGGGAGACTGGGAGCTATGTTTTCGCACAGGAATGTCTTGATCGGCTTGCGATTGCTGTTGGTGGGAATACGATTTTACCTGTGGCAGCTGAGTTGCTCCCATCATTTTTTGCTTCTGAAGAGTGGAAGAGACGACATGCGGCACTGGTTACGATAGCGCAGATTGCAGAGGGCTGTGCTAGAGTAATGATTAAGAATCTGGAGCAGGTAGTTGGTATGGTGCTGAATTCCTTCCGGGATCCTTATCCTCGGGTGAGATGGGCAGCTATCAATGCAATTGGGCAGCTTTCGACGGACCTGGGGCCTGAGTTGCAAAATAAACTGCACCATGTTGTCCTGCCTGCATTGGCTTCATCCATGGATGATTTCCAGAACCCGCGCGTACAGGCACACGCAGCTTCTGCGA TTCTAAACTTCAGCGAAAACTGCAGGCCTGATATTTTGACACCATACTTGGATGGGATAGTTGGGAAACTACTGTCATTGCTTCAGACTGGAAACCAAATGGTGCAAGAAGGTGCTTTAACTGCTTTAGCATCAGCTGCAGATTCTTCTCAGGAACACTTCCAAAAATATTATGATGCAGTCATGCCATATCTCAAGTCTATACTCAT GAATGCAAC TGACAAATCAAATA GAATGTTGCGGGCCAAATCGATGGAATGCATTAGCTTAGTTGGTATGGCTGTTGGAAAGCAAAAATTTAAGGATGATGCTAAGCAGGTGATGGAAGTTTTGATGACATTGCAAGGATCTCAGATGGAGGCTGATGACCCTATAACAAGTTACATGCTGCAAGCATGGGCGAGATTGTGTAAATGCCTTGGTCAGGACTTCTTACCATACATGAATGTTGTTATGCCTCCTCTGCTCCAGTCTGCTCAGCTTAAACCAGATGTGAGTGTCACATCTGCTGGGCCAGAAGATGAAAATGGTGAATCTGATGATGAGGGTGTTGAGACTATTACGCTAGGAGACAAGAGAATTGGCATCCGAACCAGTCTGCTGGAGGAAAAAGCAACGGCATGTAATATGCTATGTTGTTATGCTGATGAGCTCAAGGAAGGGTTTTTCCCATGGATTGATCAGGTTGCAACTACTCTGGTTCCTCTC]
[+] EMBL AK100005 [ CTTCTTCCCCTCAACCCGCTCCAAAATTCCCCCGCCTCCCACTCCAAAACCCAAAAAAATCCCGCGCGGCCGCGTGAAGCCGTGAATCTACTCCTCCCTTCCTCCGCGCCCGCGCGTCGCCATGAATCCGCAGGCGGAGGGCGATGCGGCGGCGGCGGCGGCGGTGCTGGGGGCGGACCCGGCGGGGCTGACGGCGCTGCTGGGGGACCTGACGTCGCCGGCGAACGAGGCGAGGTCGAGGGCGGAGGGGATGTTCCACGCGCTCAGGGCGTCCCACCCGGACGCGCTCGCGCTCCGCCTCGCGCACCTGCTGCTCTCCCCGGCGCACCCCTCCGCGCCCATGGCGGCCGTGCTCCTGCGCCGCCTCATCTCCCCGGGGTCGCAGGCGTTCGTCTACCCGGGGCTCTCCCCCGCCACGCAGTCCTCGCTCCGCGCGCTCCTCCTCTCCGCGGCGTCCGCGACGGGGCTCTCCAAGTCCATCTCGAAGAAGCTCTCCGACGCCGTCGCCGAGCTCGCGTCCTTCCTGCTGCCGTCCAACGCGTGGCCCGACCTCCTCACCTTCCTCTACAAGTCCATCGCCTCCCCATCCTCGCCTCCGGCGCTGCAGGAGTCGGCGCTCAACATCCTAGCCCGGCTGGCCTCCCATCTCGCCGCGGGCTTCCCCAACCTCCACGCCCTCCTCCTCTCCGCGCTCTCGCACCCGTCGTCCGCAGATGTCCGCGTCGCGGGGCTCAACGCCGCTATCAGCCTCATACAGTCTCTCCCCTCTGCCGCCGACCGTGACCAGTTTCAGGATCTCCTCCCAGCCATGATGCGCGCCCTCGCTGAATCGCTCAACTGTGGGAACGAGGGCTCTGCACAGGAGGCGCTTGAGATGATGATCGAGCTTGCAGGTGCAGAACCACGGTTTCTCCGCCGCCAGCTGCCTGACGTGGTTGGTTCTATGTTGCAAATTGCTGAAGCCCCTGGATTAGAGGATGGTACGCGACACCTTGCTGTCGAGTTTGTTGTTACCCTTGCTGAGGCAAGGGAGCGCGCGCCCGGGATGATGAGAAAGCTGCCACGGTATGTGGGCCGGCTATTTGCGGTGCTCATGACAATGCTGCTCGATGTCCAGGATGAACCTGCGTGGCATGCAGCGGTGTCGGAAGAAGAGGATGCTGGGGAGACTGGGAGCTATGTTTTCGCACAGGAATGTCTTGATCGGCTTGCGATTGCTGTTGGTGGGAATACGATTTTACCTGTGGCAGCTGAGTTGCTCCCATCATTTTTTGCTTCTGAAGAGTGGAAGAGACGACATGCGGCACTGGTTACGATAGCGCAGATTGCAGAGGGCTGTGCTAGAGTAATGATTAAGAATCTGGAGCAGGTAGTTGGTATGGTGCTGAATTCCTTCCGGGATCCTTATCCTCGGGTGAGATGGGCAGCTATCAATGCAATTGGGCAGCTTTCGACGGACCTGGGGCCTGAGTTGCAAAATAAACTGCACCATGTTGTCCTGCCTGCATTGGCTTCATCCATGGATGATTTCCAGAACCCGCGCGTACAGGCACACGCAGCTTCTGCGA TTCTAAACTTCAGCGAAAACTGCAGGCCTGATATTTTGACACCATACTTGGATGGGATAGTTGGGAAACTACTGTCATTGCTTCAGACTGGAAACCAAATGGTGCAAGAAGGTGCTTTAACTGCTTTAGCATCAGCTGCAGATTCTTCTCAGGAACACTTCCAAAAATATTATGATGCAGTCATGCCATATCTCAAGTCTATACTCAT GAATGCAAC TGACAAATCAAATA GAATGTTGCGGGCCAAATCGATGGAATGCATTAGCTTAGTTGGTATGGCTGTTGGAAAGCAAAAATTTAAGGATGATGCTAAGCAGGTGATGGAAGTTTTGATGACATTGCAAGGATCTCAGATGGAGGCTGATGACCCTATAACAAGTTACATGCTGCAAGCATGGGCGAGATTGTGTAAATGCCTTGGTCAGGACTTCTTACCATACATGAATGTTGTTATGCCTCCTCTGCTCCAGTCTGCTCAGCTTAAACCAGATGTGAGTGTCACATCTGCTGGGCCAGAAGATGAAAATGGTGAATCTGATGATGAGGGTGTTGAGACTATTACGCTAGGAGACAAGAGAATTGGCATCCGAACCAGTCTGCTGGAGGAAAAAGCAACGGCATGTAATATGCTATGTTGTTATGCTGATGAGCTCAAGGAAGGGTTTTTCCCATGGATTGATCAGGTTGCAACTACTCTGGTTCCTCTC]
[+] EMBL CB634849 [ TACCTGTGGCAGCTGAGTTGCTCCCATCATTTTTTGCTTCTGAAGAGTGGAAGAGACGACATGCGGCACTGGTTACGATAGCGCAGATTGCAGAGGGCTGTGCTAGAGTAATGATTAAGAATCTGGAGCAGGTAGTTGGTATGGTGCTGAATTCCTTCCGGGATCCTCATCCTCGGGTGAGATGGGCAGCTATCAATGCAATTGGGCAGCTTTCGACGGACCTGGGGCCTGAGTTGCAAAATAAACTGCACCATGTTGTCCTGCCTGCATTGGCTTCATCCATGGATGATTTCCAGAACCCGCGCGTACAGGCACACGCAGCTTCTGCGA TTCTAAACTTCAGCGAAAACTGCAGGCCTGATATTTTGACACCATACTTGGATGGGATAGTTGGGAAACTACTGTCATTGCTTCAGACTGGAAACCAAATGGTGCAAGAAGGTGCTTTAACTGCTTTAGCATCAGCTGCAGATTCTTCTCAGGAACACTTCCAAAAATATTATGATGCAGTCATGCCATATCTCAAGTCTATACTCAT GAATGCAAC TGACAAATCAAATA GAATGTTGCGGGCCAAATCGATGGAATGCATTAGCTTAGTTGGTATGGCTGTTGGAAAGCAAAAATTTAAGGATGATGCTAAGCAGGTGATGGAAGTTTTGATGACATTGCAAGGATCTCAGATGGAGGCTGATGACCCTATAACAAGTTACATGCTGCAAGCATGGGCGAGATTGTGTAAATGCCTTGGTCAGGACTTCTTACCATACATGAATGTTGTTATG ]
[+] EMBL CB675506 [ CTTCCGGGATCCTTATCCTCGGGTGAGATGGGCAGCTATCAATGCAATTGGGCAGCTTTCGACGGACCTGGGGCCTGAGTTGCAAAATAAACTGCACCATGTTGTCCTGCCTGCATTGGCTTCATCCATGGATGATTTCCAGAACCCGCGCGTACAGGCACACGCAGCTTCTGCGA TTCTAAACTTCAGCGAAAACTGCAGGCCTGATATTTTGACACCATACTTGGATGGGATAGTTGGGAAACTACTGTCATTGCTTCAGACTGGAAACCAAATGGTGCAAGAAGGTGCTTTAACTGCTTTAGCATCAGCTGCAGATTCTTCTCACGAACACTTCCAAAAATATTATGATGCAGTCATGCCATATCTCAAGTCTATACTCAT GAATGCAAC TGACAAATCAAATA GAATGTTGCGGGCCAAATCGATGGAATGCATTAGCTTAGTTGGTATGGCTGATGGAAAGCAAAAATTTAAAGATGATGCTAAGCAGGTGATGGAAGTTTTGATGACATTGCAAGGATCTCAGATGGAGGCTGATGACCCTATAACAAGTTACATGCTGCAAGCATGGGCGAGATTGTGTAAATGCCTTGGTCAGGACTTCTTACCATACATGAATGTTGTTATGCCTCCTCTGCTCCAGTCTGCTCAGCTTAAACCACATGTGAGTGTCACATCTGCTGGGCCAGAAGATGAAAATGGTGAATCTGATGATGAGGGTGTTGAGACTATTACGCTAGGAGACAAGAGCATTGGCATCCGAACCAGTCTGCTGGATGAAAA ]
[+] EMBL OSS4004A [ CATGTTGTCCTGCCTGCATTGGCTTCATCCATGGATGATTTCCAGAACCCGCGCGTACAGGCACACGCAGCTTCTGCGA TTCTAAACTTCAGCGAAAACTGCAGGCCTGATATTTTGACACCATACTTGGATGGGATAGTTGGGAAACTACTGTCATTGCTTCAGACTGGAAACCAAATGGTGCAAGAAGGTGCTTTAACTGCTTTAGCATCAGCTGCAGATTCTTCTCAGG ACACTTCCAAAAATATTATGATGCAGTCATGCCATATCTCAAGTC ]
[+] EMBL OSS2606A [ ATGTTGTCCTGCCTGCATTGGCTTCATCCATGGATGATTTCCAGAACCCGCGCGTACAGGCACACGCAGCTTCTG GANTTCTAAACTTCAGCGAAAACTGCAGGCCTGATATTTTGACACCATACTTGGATGGGATAGTTGGGAAACTACTGTCATTGCTTCAGACTGGAAACCAAATGGTGCAAGAAGGTGCTTTAACTGCTTTAGCATCAGCTGCAGATTCTTCTCAGGAACACTTCCAAAAATATTATGATGCAGTCATGCCATATCTCAAGTCTATACTCATGGAATGCAACTTGACAAATCAAATAGGAATGTTGCGGGCCAAATCGATGGGATGCATTAGCTTAGTTGGTATGGCTG ]
[+] EMBL CB634251 [ TGACATTGCAAGGATCTCAGATGGAGGCTGATGACCCTATAACAAGTTACATGCTGCAAGCATGGGCGAGATTGTGTAAATGCCTTGGTCAGGACTTCTTACCATACATGAATGTTGTTATGCCTCCTCTGCTCCAGTCTGCTCAGCTTAAACCAGATGTGAGTGTCACATCTGCTGGGCCAGAAGATGAAAATGGTGAATCTGATGATGAGGGTGTTGAGACTATTACGCTAGGAGACAAGAGAATTGGCATCCGAACCAGTCTGCTGGAGGAAAAAGCAACGGCATGTAATATGCTATGTTGTTATGCTGATGAGCTCAAGGAAGGGTTTTTCCCATGGATTGATCAGGTTGCAACTACTCTGGTTCCTCTC]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||