These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10037#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2366 fasta sequence [CCCCCTCGCCGACGGCGAGGCGGGCGACCCCGGTGGGATCCTGTGAGCCGGCGACGGCTTCCCCCAACTCCCGCCTCGCCGCGCGCCGATGTTGCCGTCTCCCTGCGCGATTCCGCCGCCGCCGCAATGTATTTATTCGGTGTTCGCCATTTCTAGTCAATCGTCAAAGAAAGCCGGATGCAAAATGTGGACAACTATCTGGACCAGTGCTCAAGAAAAAAGGTTAAAGCTGAGAAAGAAGTGTTCTTTTTTACCAAAATTGACGAAGGACTTCTTCATCTGATAGAAATATATGGGGTCACTAAACTTGTTATGGGTGCTGCATCAGACAGACACTACAAAAGAAAAATGAAAGCACCACAATCACAAACAGCAATAAGTGTGATGCAAAGAGCACATTCATACTGCAATATATGGTTTATTTGCAACGGGAAGCTAACATGTGTCGGGGAGGCCAGTTGTTGCCCTGTAAAAAGGTCAAAATCAGCACGCCTACCTTCTTCTGTAGACAGTTGCAAGGTGGATCTTCAAAGTTTGCTTGAGCCTAATATAGAGGCTAAAAGATTGGGATGCATGTATATTAATGAAATGGAACTAAGGAAAGAGACAGAGGCAAAACTCTCACAAGAAAAGGAAGAGTCAGAATCTCTCAAACATGCCACTATGGTGCTCCAAAATGACCTGGACTGGCTCAAATATCAGTTGAATGAGAAAGCCAATAGATTACAAGATCTAAACCAACAGAAGCACCTCCTTGAACACCGCATCTCAGAGTCAGACTCAGTTGCCACTTATCTAGAAGAGAGCATGAAGGTTACGGAATCTCGTGTCCAGTCACTGAAGTTAGAGTACAGTAAAATGAAGCGAGAGCGAGATGATGCAGTTAAAGAGGCAAGGAGCATGCGTATAGAGAAGGAGCTGACGAATTCTTGTGCCTATGGAGCAATAAGCTCTGAGTTCTCCTTGATGGAGTTGGAGCAGGCAACTCAGAATTTCAGCAATGCACTTAACATCGGTCAAGGTGGATTTGGATCTGTATACAAAGGTTCTCTGCGCAATACGACAGTAGCTATAAAGATGCTTAGTACTGACAGCTTGCATGGCCAATCTCAGTTCCATCAAGAGGTTGCTATACTCAGTAGAGTAAGGCATCCAAACTTAGTCACCCTTATTGGAGCCTGCACTGAAGCTTCAGCGCTTGTTTATGAGCTCTTACCAAATGGAAGCCTGGAGGACCGACTCAACTGTGTTGACAACACCCCGCCACTCACTTGGCAAGTGCGCATCCAGATCATCACGGAGATTTGCTCTGCACTTATCTTCCTTCACAAGCACCGGCCTCACCCAGTGGTGCATGGGGACC-TCAAGCCAGGCAACATCCTTCTTGATGCGAATTTGCAG-AGCAAACTCAGTGATTTTGGGATTTCACGCCTCCTTCTGGAGTCCAGTGTCACTGGAAGCGACGCACACTACACCTCCAGGCCTATGGGAACACCGGCATACATGGACCCAGAGTTCTTCGCCACAGGGGAGCTGACGCCACAGTCTGATACTTACTCTTTTGGTGTTACCATCATGCGTCTCTTGACCGGACGGGCACCTCTACGCCTGATTAGGACAGTGCGGGAGGCGCTGAACGACTATGACCTGCAGTCAGTGTTGGACCATTCTGCAGGTGACTGGCCATTGGTGCATGTGGAGCAGCTCGCACACATTGCGCTGCAGTGCACAGAGCTCAGCAAGCAGAGGCGCCCTGATCTTGAGCATGATGTGTGGGAGGTGATTGAACCTATGAAGAAGGAAGCTCATTCGCCATTGTCCCAGTCTTTTCGATCTATCTGTAGTGCCATTGAAACTGCCACCCCGTCCTACTTCCTTTGCCCAATCTCTCAGGTGACCATGAGAGATCCTCAGATGGCAGCGG-ATGGCTTCACC--TA-TG-AAGC-TGA-TGC-TAT-AAGA-GA--TTGGCTGGATAAGGG-ACATGACAGGTCTCCAGTGACTAACCAAACACTTGCTAACTGTGACACTATCCCCAATATCGCACTGCGTTCGGCCATTCAAGAATATCTCAAGCAGAACAACATGAACAAGTCATTTGCACTATATGAACAGCAGCATTAGTGGCCTGTATTGAGTTTCATCTGTGCTTCGACTGTAATAGATCGTTTCTGTGCCAGTAAGAAACTAAGGAGGTAGTGTTAGAATAGTGTTTTTCTTTTTTCAGTTGAGCTGTAAACCTAAGTTAAAACTTAGGAACCAATTCTTTTCATTTTACCTGAGTTTTTGAAAATTAAGGGTTGGGTCTTCTTTGAACTAATTCATGTGGAAATCCTACAAAACTGTGTGTTAAATTCCAGCATTCTAAATGAGAT] [+] EMBL AK073764 [CCCCCTCGCCGACGGCGAGGCGGGCGACCCCGGTGGGATCCTGTGAGCCGGCGACGGCTTCCCCCAACTCCCGCCTCGCCGCGCGCCGATGTTGCCGTCTCCCTGCGCGATTCCGCCGCCGCCGCAATGTATTTATTCGGTGTTCGCCATTTCTAGTCAATCGTCAAAGAAAGCCGGATGCAAAATGTGGACAACTATCTGGACCAGTGCTCAAGAAAAAAGGTTAAAGCTGAGAAAGAAGTGTTCTTTTTTACCAAAATTGACGAAGGACTTCTTCATCTGATAGAAATATATGGGGTCACTAAACTTGTTATGGGTGCTGCATCAGACAGACACTACAAAAGAAAAATGAAAGCACCACAATCACAAACAGCAATAAGTGTGATGCAAAGAGCACATTCATACTGCAATATATGGTTTATTTGCAACGGGAAGCTAACATGTGTCGGGGAGGCCAGTTGTTGCCCTGTAAAAAGGTCAAAATCAGCACGCCTACCTTCTTCTGTAGACAGTTGCAAGGTGGATCTTCAAAGTTTGCTTGAGCCTAATATAGAGGCTAAAAGATTGGGATGCATGTATATTAATGAAATGGAACTAAGGAAAGAGACAGAGGCAAAACTCTCACAAGAAAAGGAAGAGTCAGAATCTCTCAAACATGCCACTATGGTGCTCCAAAATGACCTGGACTGGCTCAAATATCAGTTGAATGAGAAAGCCAATAGATTACAAGATCTAAACCAACAGAAGCACCTCCTTGAACACCGCATCTCAGAGTCAGACTCAGTTGCCACTTATCTAGAAGAGAGCATGAAGGTTACGGAATCTCGTGTCCAGTCACTGAAGTTAGAGTACAGTAAAATGAAGCGAGAGCGAGATGATGCAGTTAAAGAGGCAAGGAGCATGCGTATAGAGAAGGAGCTGACGAATTCTTGTGCCTATGGAGCAATAAGCTCTGAGTTCTCCTTGATGGAGTTGGAGCAGGCAACTCAGAATTTCAGCAATGCACTTAACATCGGTCAAGGTGGATTTGGATCTGTATACAAAGGTTCTCTGCGCAATACGACAGTAGCTATAAAGATGCTTAGTACTGACAGCTTGCATGGCCAATCTCAGTTCCATCAAGAGGTTGCTATACTCAGTAGAGTAAGGCATCCAAACTTAGTCACCCTTATTGGAGCCTGCACTGAAGCTTCAGCGCTTGTTTATGAGCTCTTACCAAATGGAAGCCTGGAGGACCGACTCAACTGTGTTGACAACACCCCGCCACTCACTTGGCAAGTGCGCATCCAGATCATCACGGAGATTTGCTCTGCACTTATCTTCCTTCACAAGCACCGGCCTCACCCAGTGGTGCATGGGGACC TCAAGCCAGGCAACATCCTTCTTGATGCGAATTTGCAG AGCAAACTCAGTGATTTTGGGATTTCACGCCTCCTTCTGGAGTCCAGTGTCACTGGAAGCGACGCACACTACACCTCCAGGCCTATGGGAACACCGGCATACATGGACCCAGAGTTCTTCGCCACAGGGGAGCTGACGCCACAGTCTGATACTTACTCTTTTGGTGTTACCATCATGCGTCTCTTGACCGGACGGGCACCTCTACGCCTGATTAGGACAGTGCGGGAGGCGCTGAACGACTATGACCTGCAGTCAGTGTTGGACCATTCTGCAGGTGACTGGCCATTGGTGCATGTGGAGCAGCTCGCACACATTGCGCTGCAGTGCACAGAGCTCAGCAAGCAGAGGCGCCCTGATCTTGAGCATGATGTGTGGGAGGTGATTGAACCTATGAAGAAGGAAGCTCATTCGCCATTGTCCCAGTCTTTTCGATCTATCTGTAGTGCCATTGAAACTGCCACCCCGTCCTACTTCCTTTGCCCAATCTCTCAGGTGACCATGAGAGATCCTCAGATGGCAGCGG ATGGCTTCACC TA TG AAGC TGA TGC TAT AAGA GA TTGGCTGGATAAGGG ACATGACAGGTCTCCAGTGACTAACCAAACACTTGCTAACTGTGACACTATCCCCAATATCGCACTGCGTTCGGCCATTCAAGAATATCTCAAGCAGAACAACATGAACAAGTCATTTGCACTATATGAACAGCAGCATTAGTGGCCTGTATTGAGTTTCATCTGTGCTTCGACTGTAATAGATCGTTTCTGTGCCAGTAAGAAACTAAGGAGGTAGTGTTAGAATAGTGTTTTTCTTTTTTCAGTTGAGCTGTAAACCTAAGTTAAAACTTAGGAACCAATTCTTTTCATTTTACCTGAGTTTTTGAAAATTAAGGGTTGGGTCTTCTTTGAACTAATTCATG ] [+] EMBL AK064032 [ GTGTGATGCAAAGAGCACATTCATACTGCAATATATGGTTTATTTGCAACGGGAAGCTAACATGTGTCAGGGAGGCCAGTTGTTGCCCTGTAAAAAGGTCAAAATCAGCACGCCTACCTTCTTCTGTAGACAGTTGCAAGGTGGATCTTCAAAGTTTGCTTGAGCCTAATATAGAGGCTAAAAGATTGGGATGCATGTATATTAATGAAATGGAACTAAGGAAAGAGACAGAGGCAAAACTCTCACAAGAAAAGGAAGAGTCAGAATCTCTCAAACATGCCACTATGGTGCTCCAAAATGACCTGGACTGGCTCAAATATCAGTTGAATGAGAAAGCCAATAGATTACAAGATCTAAACCAACAGAAGCACCTCCTTGAACACCGCATCTCAGAGTCAGACTCAGTTGCCACTTATCTAGAAGAGAGCATGAAGGTTACGGAATCTCGTGTCCAGTCACTGAAGTTAGAGTACAGTAAAATGAAGCGAGAGCGAGATGATGCAGTTAAAGAGGCAAGGAGCATGCGTATAGAGAAGGAGCTGACGAATTCTTGTGCCTATGGAGCAATAAGCTCTGAGTTCTCCTTGATGGAGTTGGAGCAGGCAACTCAGAATTTCAGCAATGCACTTAACATCGGTCAAGGTGGATTTGGATCTGTATACAAAGGTTCTCTGCGCAATACGACAGTAGCTATAAAGATGCTTAGTACTGACAGCTTGCATGGCCAATCTCAGTTCCATCAAGAGGTTGCTATACTCAGTAGAGTAAGGCATCCAAACTTAGTCACCCTTATTGGAGCCTGCACTGAAGCTTCAGCGCTTGTTTATGAGCTCTTACCAAATGGAAGCCTGGAGGACCGACTCAACTGTGTTGACAACACCCCGCCACTCACTTGGCAAGTGCGCATCCAGATCATCACGGAGATTTGCTCTGCACTTATCTTCCTTCACAAGCACCGGCCTCACCCAGTGGTGCATGGGGACC TCAAGCCAGGCAACATCCTTCTTGATGCGAATTTGCAG AGCAAACTCAGTGATTTTGGGATTTCACGCCTCCTTCTGGAGTCCAGTGTCACTGGAAGCGACGCACACTACACCTCCAGGCCTATGGGAACACCGGCATACATGGACCCAGAGTTCTTCGCCACAGGGGAGCTGACGCCACAGTCTGATACTTACTCTTTTGGTGTTACCATCATGCGTCTCTTGACCGGACGGGCACCTCTACGCCTGATTAGGACAGTGCGGGAGGCGCTGAACGACTATGACCTGCAGTCAGTGTTGGACCATTCTGCAGGTGACTGGCCATTGGTGCATGTGGAGCAGCTCGCACACATTGCGCTGCAGTGCACAGAGCTCAGCAAGCAGAGGCGCCCTGATCTTGAGCATGATGTGTGGGAGGTGATTGAACCTATGAAGAAGGAAGCTCATTTGCCATTGTCCCAGTCTTTTCGATCTATCTGTAGTGCCATTGAAACTGCCACCCCGTCCTACTTCCTTTGCCCAATCTCTCAGGTGACCATGAGAGATCCTCAGATGGCAGCGG ATGGCTTCACC TA TG AAGC TGA TGC TAT AAGA GA TTGGCTGGATAAGGG ACATGACAGGTCTCCAGTGACTAACCAAACACTTGCTAACTGTGACACTATCCCCAATATCGCACTGCGTTCGGCCATTCAAGAATATCTCAAGCAGAACAACATGAACAAGTCATTTGCACTATATGAACAGCAGCATTAGTGGCCTGTATTGAGTTTCATCTGTGCTTCGACTGTAATAGATCGTTTCTGTGCCAGTAAGAAACTAAGGAGGTAGTGTTAGAATAGTGTTTTTCTTTTTTCAGTTGAGCTGTAAACCTAAGTTAAAACTTAGGAACCAATTCTTTTCATTTTACCTGAGTTTTTGAAAATTAAGGGTTGGGTCTTCTTTGAACTAATTCATGTGGAAATCCTACAAAACTGTGTGTTAAATTCCAGCATTCTAAATGAGAT] [+] EMBL OSS14953A [ TCTCACAAGAAAAGGAAGAGTCAGAATCTCTCAAACATGCCACTATGGTGCTCCAAAATGACCTGGACTGGCTCAAATATCAGTTGAATGAGAAAGCCAATAGATTACAAGATCTAAACCAACAGAAGCACCTCCTTGAACACCGCATCTCAGAGTCAGACTCAGTTGCCACTTATCTAGAAGAGAGCATGAAGGTTACGGAATCTCGTGTCCAGTC ] [+] EMBL CB666071 [ CTCCTTGAACACCGCATCTCAGAGTCAGACTCAGTTGCCACTTATCTAGAAGAGAGCATGAAGGTTACGGAATCTCGTGTCCAGTCACTGAAGTTAGAGTACAGTAAAATGAAGCGAGAGCGAGATGATGCAGTTAAAGAGGCAAGGAGCATGCGTATAGAGAAGGAGCTGACGAATTCTTGTGCCTATGGAGCAATAAGCTCTGAGTTCTCCTTGATGGAGTTGGAGCAGGCAACTCAGAATTTCAGCAATGCACTTAACATCGGTCAAGGTGGATTTGGATCTGTATACAAAGGTTCTCTGCGCAATACGACAGTAGCTATAAAGATGCTTAGTACTGACAGCTTGCATGGCCAATCTCAGTTCCATCAAGAGGTTGCTATACTCAGTAGAGTAAGGCATCCAAACTTAGTCACCCTTATTGGAGCCTGCACTGAAGCTTCAGCGCTTGTTTATGAGCTCTTACCAAATGGAAGCCTGGAGGACCGACTCAACTGTGTTGACAACACCCCGCCACTCACTTGGCAAGTGCGCATCCAGATCATCACGGAGATTTGCTCTGCACTTATCTTCCTTCACAAGCACCGGCCTCACCCAGTGGTGCATGGGGACC TCAAGCCAGGCAACATCCTTCTTGATGCGAATTTGCAG AGCAAACTCAGTGATTTTGGGATTTCACGCCTCCTTCTGGAGTCCAGTGTCACTGGAAGCGACGCACACTACACCTCCAGGCCTATGGGAACACCGGCATACATGGACCCAGAGTTCTTCGCCACAGGGGAGCTGACGCCACAGTCTGATACTTACTCTTTTGGTG TACCATCATGCGTCTCTTG ] [+] EMBL BP184834 [ GCTCTGAGTTCTCCTTGATGGAGTTGGAGCAGGCAACTCAGAATTTCAGCAATGCACTTAACATCGGTCAAGGTGGATTTGGATCTGTATACAAAGGTTCTCTGCGCAATACGACAGTAGCTATAAAGATGCTTAGTACTGACAGCTTGCATGGCCAATCTCAGTTCCATCAAGAGGTTGCTATACTCAGTAGAGTAAGGCATCCAAACTTAGTCACCCTTATTGGAGCCTGCACTGAAGCTTCAGCGCTTGTTTATGAGCTCTTACCAAATGGAAGCCTGGAGGACCGACTCAACTGTGTTGACAACACCCCGCCACTCACTTGGCAAGTGCGCATCCAGATCATCACGGAGATTTGCTCTGCACTTATCTTCCTTCACAAGCACCGGCCTCACCCAGTGGTGCATGGGGACCTTCAAGCCAGGCAACATCCTTCTTGATGCGAATTTGCAGAAGCAAA ] [-] EMBL CB666072 [ TCTTGACCGGACGGGCACCTCTACGCCTGATTAGGACAGTGCGGGAGGCGCTGAACGACTATGACCTGCAGTCAGTGTTGGACCATTCTGCAGGTGACTGGCCATTGGTGCATGTGGAGCAGCTCGCACACATTGCGCTGCAGTGCACAGAGCTCAGCAAGCAGAGGCGCCCTGATCTTGAGCATGATGTGTGGGAGGTGATTGAACCTATGAAGAAGGAAGCTCATTCGCCATTGTCCCAGTCTTTTCGATCTATCTGTAGTGCCATTGAAACTGCCACCCCGTCCTACTTCCTTTGCCCAATCTCTCAGGTGACCATGAGAGATCCTCAGATGGCAGCGG ATGGCTTCACC TA TG AAGC TGA TGC TAT AAGA GA TTGGCTGGATAAGGG ACATGACAGGTCTCCAGTGACTAACCAAACACTTGCTAACTGTGACACTATCCCCAATATCGCACTGCGTTCGGCCATTCAAGAATATCTCAAGCAGAACAACATGAACAAGTCATTTGCACTATATGAACAGCAGCATTAGTGGCCTGTATTGAGTTTCATCTGTGCTTCGACTGTAATAGATCGTTTCTGTGCCAGTAAGAAACTAAGGAGGTAGTGTTAGAATAGTGTTTTTCTTTTTTCAGTTGAGCTGTAAACCTAAGTTAAAACTTAGGAACCAATTCTTTTCATTTTACCTGAGTTTTTGAAAATTAAGGGTTGGGTCTTCTTTGAACTAATTCATGTGGAAATCCTACAGAACTGTGTGTTAAATTC ] [+] EMBL AU075517 [ caaatTGGCACCGGAATGGCTTCACCNTTATTGAAAGCTTGATTGCTTATAAAGANGAATTTGGCTCGATAAGGGAACATGACANGTCTCCAGTGACTAACCAAACACTTGCTAACTGTGACACTATCCCCAATATCNCACTGCGTTCGGCCATTCAAGAATATCTCAAGCAGAACAACATGAACAAGTCATTTGCACTATATGAACAGCAGCATTAGTGGCCTGTATTGAGTTTCATCTGTGCTTCGACTGTAATAGATCGTTTCTGTGCCAGTAAGAAACTAAGGAGGTAGTGTTAGAATAGTGTTTTTCTTTTTTCAGTTGAGCTGTAAACCTAAGTTAAAACTTAGGAACCAATTCTTTTCATTTTACCTGAGTTTTTGAAAAT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||