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Oryza sativa
cluster # 10040 cluster # 10040       Sequences # 7       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10040#0 length = 3235 sequences # 6  
 consensus_10040#1 length = 694 sequences # 1  
consensusID : consensus_10040#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 3235
fasta sequence 
                              [GATCTGATCTTTTTTCTGCTCTCTCTTGTGTGTTTTTTCGAGTTGTTTGTGGTTGCTCACCTCTTGTGCACCGGCAATGGCAGGCTTGAGCAGCGTTTCTTGCTCGGCGGCGGCGGCGGCGGCGGCGGTTGCTAGATCTCCGGCGTGACACCGGTCGGAATGGGCTGGATGTCGACGGGGACGACGTTCGGGCGTTGATGGCAGGTGTGGTGTTCCCATGATTGATGATGTGGAGATACTGGGATGGTTCGAGATGAAGAAAATGCTTGTGAGGTGCTCTGTTGAGAGAAACCTTATTACCTGATGACTTGTTAATTCGAAGTTATTCTAGCACACCAGTTGCTGCTGGTTGGATCTTTTTCTTTCATTGCTGAGTAGGAGCGTAGGAGTTGGTTGGTTCAAGAATTTCGTTCAAGATGATGCAGAGGCCGTTCCGTCCGGAGGAGTACTCCTTGAAGGAGACTTCTCCTCACCTTGGTGGTGGAGCTGCTGGTGACAAGCTCACCACCACCTATGACTTGGTTGAGCAGATGCAGTATCTTTATGTCCGGGTAGTAAAAGCTAAGGACCTTCCAAGCAAGGACATCACTGGAAGCTGTGACCCATATGTTGAGGTGAAGCTTGGGAATTATAAGGGTACAACTCGGCATTTCGAGAAGAAGACTAATCCTGAGTGGAACCAGGTCTTTGCCTTTTCTAAGGAGCGCATTCAGTCATCAGTGGTTGAGATCATTGTCAAGGATAAGGACTTTGTCAAGGATGACTTCATCGGGCGGGTGTTGTTTGACCTGAATGAGGTCCCAAAACGAGTGCCACCTGACAGCCCATTGGCTCCACAGTGGTATCGGTTGGAAGAGCGGAATGGACACAAGGTGAAGGGAGAGTTGATGTTGGCCGTTTGGATGGGTACTCAAGCAGATGAAGCATTCCCTGAAGCTTGGCACTCTGATGCAGCGTCGATCCCAGGAGATGGACTTGCAAGTATTAGATCAAAAGTTTACCTTACTCCAAAGCTTTGGTATCTGAGAGTCAATGTCATTGAGGCACAAGATCTTATACCAAATGACAGGACCAGGTTCCCTGATGTTTATGTCAAAGCCATGCTAGGTAACCAAGCTCTTAGAACCCGGGTATCACCAAGCCGGACGCTGAATCCAATGTGGAATGAGGATTTAATGTTTGTTGCTGCTGAACCATTCGAGGAACACCTGATTCTGAGTGTAGAAGATAGGATTGCCCCAGGGAAGGATGATGTACTTGGAAGGACAATCATTTCTCTGCAGCACGTACCTCGGAGGCTGGATCACAAGTTGCTGAACAGCCAGTGGTACAATCTTGAGACGCATGTAATTGTGGATGGCGAGCAGAAGAAAGAGACCAAATTTTCAAGCCGGATTCACTTGAGAATATGCCTCGAAGGTGGATATCATGTCTTGGATGAGTCAACACATTACAGCAGTGATTTGAGGCCAACTGCTAAACAGTTATGGAAGCACAGCATTGGCATTCTTGAGTTGGGTATCTTGACAGCACAGGGCCTGTTGCCGATGAAGACCAAGGATGGGCGTGGAACAACTGATGCTTATTGTGTTGCTAAGTATGGGCAGAAGTGGGTGCGGACAAGGACTATTATTGATAGTTTCACACCCAAGTGGAATGAACAATACACTTGGGAGGTGTATGATCCCTGCACTGTGATCACTATTGGTGTATTTGACAATTGCCACTTGAATGGTGGGGAAAAAGCCAACGGTGCCCGGGATACCAGAATTGGGAAGGTCCGCATCCGCCTCTCTACGCTAGAAACTGATCGAGTATATACTCATGCTTACCCTCTGATTGTTCTGACACCTGCTGGTGTTAAGAAAATGGGGGAGGTGCAGCTTGCTGTCAGGTTCACATGCTCATCACTGCTGAACATGATGCATCTGTATTCACAACCATTGCTGCCCAAGATGCACTATGTACACCCATTGTCCGTGATGCAGGTAGACAATCTAAGGCGCCAAGCCACCAACATTGTATCAACAAGGCTGAGCCGTGCAGAACCACCACTGCGGAAGGAAATTGTGGAGTACATGCTGGATGTTGACTCTCATATGTGGAGCATGCGGAAGAGCAAGGCAAACTTTTTCCGTATCATGGGTGTCCTAAGCCCTCTGATTGCGGTGGCCAAGTGGTTTGATCAGATCTGCCATTGGAGAAATCCGCTGACCACCATACTGATCCACATTCTCTTTGTGATTTTAGTCTTGTATCCTGAGCTGATACTGCCAACAATCTTCCTCTACCTGTTCCTGATTGGAGTGTGGTACTACCGCTGGCGGCCAAGGCAGCCACCTCACATGGACACTCGCCTCTC-ACATGCGGAGAGTGCTCATCCTGATGAGCTTGATGAAGAGTTTGACACATTCCCTACTTCTCGTCCGCCTGACATTGTGAGGATGCGTTATGACCGGCTACGGAGTGTTGCTGGGAGGATACAGACCGTAGTCGGCGATCTCGCGACACAAGGAGAAAGGCTGCAGTCCCTGCTAAGCTGGAGAGACCCAAGAGCCACGGCGCTCTTTGTGACCTTCTGCTTTGTTGCTGCCATTGTCCTCT-ACGTGACTCCATTCCGTGTTGTGGTCTTCCTTGCAGGCCTGTACACCTTGAGACACCCAAGGTTCCGCCACAAGATGCCCTCTGTTCCTCTGAACTTCTTCAGGAGGCTCCCTGCAAGAACTGATAGCATGTTGTAAGCTCGACTGCCTCATGCTATGCTATCGAGCTGCCCAGGCGATGGCTGCAATGCATAAGAAATTGGAGAAACCTGAACTCTTATCTATTCTCTTTTTTGTAGTCTATCAGTTGCATGGTTATGTATGTCTTCAGGTGGTTTTGAACCTTTCATGTAACTGCTGAACGCATTATGTGACTGGATTTGCATGTATGGTGCGTGCGGGAAATTTGTTCGTGGTCATCACCTGTCATCGGGAGGCTTACTGGGCATGTCATCTCATACATATTGCATTCTGTATAATTCCATCAGATATGTGCCCCTGAATTTAGGCTAGTTGTGTTAAGGATGATGACTGACATTTGGGCTGCAGGAAGAAATTT-GTGTTAATCTGTGCTCGGCAATTCTAAGTGCAGGCATTAACCCTGACCAATCTGTGGCCCATCCTGTTGAGTGATCTGTTGTTTTGTGATTTGTGCTGATTGCCTTGGAGCCTGAACAAATTTTTTGGCAGCT]

[+] EMBL AK102476             [GATCTGATCTTTTTTCTGCTCTCTCTTGTGTGTTTTTTCGAGTTGTTTGTGGTTGCTCACCTCTTGTGCACCGGCAATGGCAGGCTTGAGCAGCGTTTCTTGCTCGGCGGCGGCGGCGGCGGCGGCGGTTGCTAGATCTCCGGCGTGACACCGGTCGGAATGGGCTGGATGTCGACGGGGACGACGTTCGGGCGTTGATGGCAGGTGTGGTGTTCCCATGATTGATGATGTGGAGATACTGGGATGGTTCGAGATGAAGAAAATGCTTGTGAGGTGCTCTGTTGAGAGAAACCTTATTACCTGATGACTTGTTAATTCGAAGTTATTCTAGCACACCAGTTGCTGCTGGTTGGATCTTTTTCTTTCATTGCTGAGTAGGAGCGTAGGAGTTGGTTGGTTCAAGAATTTCGTTCAAGATGATGCAGAGGCCGTTCCGTCCGGAGGAGTACTCCTTGAAGGAGACTTCTCCTCACCTTGGTGGTGGAGCTGCTGGTGACAAGCTCACCACCACCTATGACTTGGTTGAGCAGATGCAGTATCTTTATGTCCGGGTAGTAAAAGCTAAGGACCTTCCAAGCAAGGACATCACTGGAAGCTGTGACCCATATGTTGAGGTGAAGCTTGGGAATTATAAGGGTACAACTCGGCATTTCGAGAAGAAGACTAATCCTGAGTGGAACCAGGTCTTTGCCTTTTCTAAGGAGCGCATTCAGTCATCAGTGGTTGAGATCATTGTCAAGGATAAGGACTTTGTCAAGGATGACTTCATCGGGCGGGTGTTGTTTGACCTGAATGAGGTCCCAAAACGAGTGCCACCTGACAGCCCATTGGCTCCACAGTGGTATCGGTTGGAAGAGCGGAATGGACACAAGGTGAAGGGAGAGTTGATGTTGGCCGTTTGGATGGGTACTCAAGCAGATGAAGCATTCCCTGAAGCTTGGCACTCTGATGCAGCGTCGATCCCAGGAGATGGACTTGCAAGTATTAGATCAAAAGTTTACCTTACTCCAAAGCTTTGGTATCTGAGAGTCAATGTCATTGAGGCACAAGATCTTATACCAAATGACAGGACCAGGTTCCCTGATGTTTATGTCAAAGCCATGCTAGGTAACCAAGCTCTTAGAACCCGGGTATCACCAAGCCGGACGCTGAATCCAATGTGGAATGAGGATTTAATGTTTGTTGCTGCTGAACCATTCGAGGAACACCTGATTCTGAGTGTAGAAGATAGGATTGCCCCAGGGAAGGATGATGTACTTGGAAGGACAATCATTTCTCTGCAGCACGTACCTCGGAGGCTGGATCACAAGTTGCTGAACAGCCAGTGGTACAATCTTGAGACGCATGTAATTGTGGATGGCGAGCAGAAGAAAGAGACCAAATTTTCAAGCCGGATTCACTTGAGAATATGCCTCGAAGGTGGATATCATGTCTTGGATGAGTCAACACATTACAGCAGTGATTTGAGGCCAACTGCTAAACAGTTATGGAAGCACAGCATTGGCATTCTTGAGTTGGGTATCTTGACAGCACAGGGCCTGTTGCCGATGAAGACCAAGGATGGGCGTGGAACAACTGATGCTTATTGTGTTGCTAAGTATGGGCAGAAGTGGGTGCGGACAAGGACTATTATTGATAGTTTCACACCCAAGTGGAATGAACAATACACTTGGGAGGTGTATGATCCCTGCACTGTGATCACTATTGGTGTATTTGACAATTGCCACTTGAATGGTGGGGAAAAAGCCAACGGTGCCCGGGATACCAGAATTGGGAAGGTCCGCATCCGCCTCTCTACGCTAGAAACTGATCGAGTATATACTCATGCTTACCCTCTGATTGTTCTGACACCTGCTGGTGTTAAGAAAATGGGGGAGGTGCAGCTTGCTGTCAGGTTCACATGCTCATCACTGCTGAACATGATGCATCTGTATTCACAACCATTGCTGCCCAAGATGCACTATGTACACCCATTGTCCGTGATGCAGGTAGACAATCTAAGGCGCCAAGCCACCAACATTGTATCAACAAGGCTGAGCCGTGCAGAACCACCACTGCGGAAGGAAATTGTGGAGTACATGCTGGATGTTGACTCTCATATGTGGAGCATGCGGAAGAGCAAGGCAAACTTTTTCCGTATCATGGGTGTCCTAAGCCCTCTGATTGCGGTGGCCAAGTGGTTTGATCAGATCTGCCATTGGAGAAATCCGCTGACCACCATACTGATCCACATTCTCTTTGTGATTTTAGTCTTGTATCCTGAGCTGATACTGCCAACAATCTTCCTCTACCTGTTCCTGATTGGAGTGTGGTACTACCGCTGGCGGCCAAGGCAGCCACCTCACATGGACACTCGCCTCTC ACATGCGGAGAGTGCTCATCCTGATGAGCTTGATGAAGAGTTTGACACATTCCCTACTTCTCGTCCGCCTGACATTGTGAGGATGCGTTATGACCGGCTACGGAGTGTTGCTGGGAGGATACAGACCGTAGTCGGCGATCTCGCGACACAAGGAGAAAGGCTGCAGTCCCTGCTAAGCTGGAGAGACCCAAGAGCCACGGCGCTCTTTGTGACCTTCTGCTTTGTTGCTGCCATTGTCCTCT ACGTGACTCCATTCCGTGTTGTGGTCTTCCTTGCAGGCCTGTACACCTTGAGACACCCAAGGTTCCGCCACAAGATGCCCTCTGTTCCTCTGAACTTCTTCAGGAGGCTCCCTGCAAGAACTGATAGCATGTTGTAAGCTCGACTGCCTCATGCTATGCTATCGAGCTGCCCAGGCGATGGCTGCAATGCATAAGAAATTGGAGAAACCTGAACTCTTATCTATTCTCTTTTTTGTAGTCTATCAGTTGCATGGTTATGTATGTCTTCAGGTGGTTTAGAACCTTTCATGTAACTGCTGAACGCATTATGTGACTGGATTTGCATGTATGGTGCGTGCGGGAAATTTGTTCGTGGTCATCACCTGTCATCGGGAGGCTTACTGGGCATGTCATCTCATACATATTGCATTCTGTATAATTCCATCAGATATGTGCCCCTGAATTTAGGCTAGTTGTGTTAAGGATGATGACTGACATTTGGGCTGCAGGAAGAAATTT GTGTTAATCTGTGCTCGGCAATTCTAAGTGCAGGCATTAACCCTGACCAATCTGTGGCCCATCCTGTTGAGTGATCTGTTGTTTTGTGATTTGTGCTGATTGCCTTGGAGCCTGAACAAATTTTTTGGCAGCT]
[+] EMBL AK058522             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ATTTCTCTGCAGCACGTACCTCGGAGGCTGGATCACAAGTTGCTGAACAGCCAGTGGTACAATCTTGAGAAGCATGTAATTGTGGATGGCGAGCAGAAGAAAGAGACCAAATTTTCAAGCCGGATTCACTTGAGAATATGCCTCGAAGGTGGATATCATGTCTTGGATGAGTCAACACATTACAGCAGTGATTTGAGGCCAACTGCTAAACAGTTATGGAAGCACAGCATTGGCATTCTTGAGTTGGGTATCTTGACAGCACAGGGCCTGTTGCCGATGAAGACCAAGGATGGGCGTGGAACAACTGATGCTTATTGTGTTGCTAAGTATGGGCAGAAGTGGGTGCGGACAAGGACTATTATTGATAGTTTCACACCCAAGTGGAATGAACAATACACTTGGGAGGTGTATGATCCCTGCACTGTGATCACTATTGGTGTATTTGACAATTGCCACTTGAATGGTGGGGAAAAAGCCAACGGTGCCCGGGATACCAGAATTGGGAAGGTCCGCATCCGCCTCTCTACGCTAGAAACTGATCGAGTATATACTCATGCTTACCCTCTGATTGTTCTGACACCTGCTGGTGTTAAGAAAATGGGGGAGGTGCAGCTTGCTGTCAGGTTCACATGCTCATCACTGCTGAACATGGTGCATCTGTATTCACAACCATTGCTGCCCAAGATGCACTATGTACACCCATTGTCCGTGATGCAGGTAGACAATCTAAGGCGCCAAGCCACCAACATTGTATCAACAAGGCTGAGCCGTGCAGAACCACCACTGCGGAAGGAAATTGTGGAGTACATGCTGGATGTTGACTCTCATATGTGGAGCATGCGGAAGAGCAAGGCAAACTTTTTCCGTATCATGGGTGTCCTAAGCCCTCTGATTGCGGTGGCCAAGTGGTTTGATCAGATCTGCCATTGGAGAAATCCGCTGACCACCATACTGATCCACATTCTCTTTGTGATTTTAGTCTTGTATCCTGAGCTGATACTGCCAACAATCTTCCTCTACCTGTTCCTGATTGGAGTGTGGTACTACCGCTGGCGGCCAAGGCAGCCACCTCACATGGACACTCGCCTCTC ACATGCGGAGAGTGCTCATCCTGATGAGCTTGATGAAGAGTTTGACACATTCCCTACTTCTCGTCCGCCTGACATTGTGAGGATGCGTTATGACCGGCTACGGAGTGTTGCTGGGAGGATACAGACCGTAGTCGGCGATCTCGCGACACAAGGAGAAAGGCTGCAGTCCCTGCTAAGCTGGAGAGACCCAAGAGCCACGGCGCTCTTTGTGACCTTCTGCTTTGTTGCTGCCATTGTCCTCT ACGTGACTCCATTCCGTGTTGTGGTCTTCCTTGCAGGCCTGTACACCTTGAGACACCCAAGGTTCCGCCACAAGATGCCCTCTGTTCCTCTGAACTTCTTCAGGAGGCTCCCTGCAAGAACTGATAGCATGTTGTAAGCTCGACTGCCTCATGCTATGCTATCGGGCTGCCCAGGCGATGGCTGCAATGCATAAGAAATTGGAGAAACCTGAACTCTTATCTATTCTCTTTTTTGTAGTCTATCAGTTGCATGGTTATGTATGTCTTCAGGTGGTTTTGAACCTTTCATGTAACTGCTGAACGCATTATGTGACTGGATTTGCATGTATGGTGCGTGCGGGAAATTTGTTCGTGGTCATCACCTGTCATCGGGAGGCTTACTGGGCATGTCATCTCATACATATTGCATTCTGTATAATTCCATCAGATATGTGCCCCTGAATTTAGGCTAGTTGTGTTAAGGATGATGACTGACATTTGGGCTGCAGGAAGAAATTT GTGTTAATCTGTGCTCGGCAATTCTAAGTGCAGGCATT                                                                                               ]
[+] EMBL CA882852             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATGTTGACTCTCATATGTGGAGCATGCGGAAGAGCAAGGCAAACTTTTTCCGTATCATGGGTGTCCTAAGCCCTCTGATTGCGGTGGCCAAGTGGTTTGATCAGATCTGCCATTGGAGAAATTCGCTGACCACCATACTGATCCACATTCTCTTTGTGATTTTAGTCTTGTATCCTGAGCTGATACTGCCAACAATCTTCCTCTACCTGTTCCTGATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL OSC21671             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              tnGAGTGTGGTACTACCGCTGGCGGCCAAGGCAGCCACCTCACATGGACACTCGCCTCTC ACATGCGGAGAGTGCTCATCCTGATGAGCTTGATGAAGAGTTTGACACATTCCCTACTTCTCGTCCGCCTGACATTGTGAGGATGCGTTATGACCGGCTACGGAGTGTTGCTGGGAGGATACAGACCGTAGTCGGCGATCTCGCGACACAAGGAGAAAGGCTGCAGTCCCTGCTAAGCTGGAGAGACCCAAGAGCCACGGCGCTCTTTGTGACCTTCTGCTTTGTTGCTGCCATTGTCCTCTAACGTGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BI806787             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGCCTCTCNACATGCCG GAGTGCTCATCCTGATGAGC TGATGNAGAGTTTGACACATTCCCTACTTCTCGTCCG CTGAC TTGTGAGGATGCGTTATGACCGGCTACGGAGTGTTGCTGGGAGGATACAGACCGTAGTCGGCGATCTCGCGACACAAGGAGAAAGGCTGCAGT CCTGCTAAGCTGGAGAGACCCAAGAGCCACGGCGCTCTTTGTGACCTTCTGCTTTGTTGCTGCCATTGTCCTCT ACGTGACTCCATTCCGTGTTGTGGTCTTCCTTGCAGGCCTGTACACCTTGAGACACCCAAGGTTCCGCCACAAGATGCCCTCTGTTCCTCTGAACTTCTTCAGGAGGCTCCCTGCAAGAACTGATAGCATGTTGTAAGCTCGACTGCCTCATGCTATGCTATCGAGCTGCCCAGGCGATGGCTGCAATGCATAAGAAATTGGAGAAACCTGAACTCTTATCTATTCTCTTTTTTGTAGTCTATCAGTTGCATGGTTATGTATGTCTTCAGGTGGTTTTGAACCTTTCATGTAACTGCTGAACGCATTATGTGACTGGATTTGCATGTATGGTGCGT                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AA751333             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CTTACTGGGCATGTCATCTCATACATATTGCATTCTGTATAATTCCATCAGATATGTGCCCCTGAATTTAGGCTAGTTGTGTTAAGGATGATGACTGACATTTGGGCTGCAGGAAGAAATTTCGTGTTAATCTGTGCTCGGCAATTCTAAGTGCAGGCATTAACCC                                                                                          ]




>consensus_10040#0
GATCTGATCTTTTTTCTGCTCTCTCTTGTGTGTTTTTTCGAGTTGTTTGTGGTTGCTCAC
CTCTTGTGCACCGGCAATGGCAGGCTTGAGCAGCGTTTCTTGCTCGGCGGCGGCGGCGGC
GGCGGCGGTTGCTAGATCTCCGGCGTGACACCGGTCGGAATGGGCTGGATGTCGACGGGG
ACGACGTTCGGGCGTTGATGGCAGGTGTGGTGTTCCCATGATTGATGATGTGGAGATACT
GGGATGGTTCGAGATGAAGAAAATGCTTGTGAGGTGCTCTGTTGAGAGAAACCTTATTAC
CTGATGACTTGTTAATTCGAAGTTATTCTAGCACACCAGTTGCTGCTGGTTGGATCTTTT
TCTTTCATTGCTGAGTAGGAGCGTAGGAGTTGGTTGGTTCAAGAATTTCGTTCAAGATGA
TGCAGAGGCCGTTCCGTCCGGAGGAGTACTCCTTGAAGGAGACTTCTCCTCACCTTGGTG
GTGGAGCTGCTGGTGACAAGCTCACCACCACCTATGACTTGGTTGAGCAGATGCAGTATC
TTTATGTCCGGGTAGTAAAAGCTAAGGACCTTCCAAGCAAGGACATCACTGGAAGCTGTG
ACCCATATGTTGAGGTGAAGCTTGGGAATTATAAGGGTACAACTCGGCATTTCGAGAAGA
AGACTAATCCTGAGTGGAACCAGGTCTTTGCCTTTTCTAAGGAGCGCATTCAGTCATCAG
TGGTTGAGATCATTGTCAAGGATAAGGACTTTGTCAAGGATGACTTCATCGGGCGGGTGT
TGTTTGACCTGAATGAGGTCCCAAAACGAGTGCCACCTGACAGCCCATTGGCTCCACAGT
GGTATCGGTTGGAAGAGCGGAATGGACACAAGGTGAAGGGAGAGTTGATGTTGGCCGTTT
GGATGGGTACTCAAGCAGATGAAGCATTCCCTGAAGCTTGGCACTCTGATGCAGCGTCGA
TCCCAGGAGATGGACTTGCAAGTATTAGATCAAAAGTTTACCTTACTCCAAAGCTTTGGT
ATCTGAGAGTCAATGTCATTGAGGCACAAGATCTTATACCAAATGACAGGACCAGGTTCC
CTGATGTTTATGTCAAAGCCATGCTAGGTAACCAAGCTCTTAGAACCCGGGTATCACCAA
GCCGGACGCTGAATCCAATGTGGAATGAGGATTTAATGTTTGTTGCTGCTGAACCATTCG
AGGAACACCTGATTCTGAGTGTAGAAGATAGGATTGCCCCAGGGAAGGATGATGTACTTG
GAAGGACAATCATTTCTCTGCAGCACGTACCTCGGAGGCTGGATCACAAGTTGCTGAACA
GCCAGTGGTACAATCTTGAGACGCATGTAATTGTGGATGGCGAGCAGAAGAAAGAGACCA
AATTTTCAAGCCGGATTCACTTGAGAATATGCCTCGAAGGTGGATATCATGTCTTGGATG
AGTCAACACATTACAGCAGTGATTTGAGGCCAACTGCTAAACAGTTATGGAAGCACAGCA
TTGGCATTCTTGAGTTGGGTATCTTGACAGCACAGGGCCTGTTGCCGATGAAGACCAAGG
ATGGGCGTGGAACAACTGATGCTTATTGTGTTGCTAAGTATGGGCAGAAGTGGGTGCGGA
CAAGGACTATTATTGATAGTTTCACACCCAAGTGGAATGAACAATACACTTGGGAGGTGT
ATGATCCCTGCACTGTGATCACTATTGGTGTATTTGACAATTGCCACTTGAATGGTGGGG
AAAAAGCCAACGGTGCCCGGGATACCAGAATTGGGAAGGTCCGCATCCGCCTCTCTACGC
TAGAAACTGATCGAGTATATACTCATGCTTACCCTCTGATTGTTCTGACACCTGCTGGTG
TTAAGAAAATGGGGGAGGTGCAGCTTGCTGTCAGGTTCACATGCTCATCACTGCTGAACA
TGATGCATCTGTATTCACAACCATTGCTGCCCAAGATGCACTATGTACACCCATTGTCCG
TGATGCAGGTAGACAATCTAAGGCGCCAAGCCACCAACATTGTATCAACAAGGCTGAGCC
GTGCAGAACCACCACTGCGGAAGGAAATTGTGGAGTACATGCTGGATGTTGACTCTCATA
TGTGGAGCATGCGGAAGAGCAAGGCAAACTTTTTCCGTATCATGGGTGTCCTAAGCCCTC
TGATTGCGGTGGCCAAGTGGTTTGATCAGATCTGCCATTGGAGAAATCCGCTGACCACCA
TACTGATCCACATTCTCTTTGTGATTTTAGTCTTGTATCCTGAGCTGATACTGCCAACAA
TCTTCCTCTACCTGTTCCTGATTGGAGTGTGGTACTACCGCTGGCGGCCAAGGCAGCCAC
CTCACATGGACACTCGCCTCTCACATGCGGAGAGTGCTCATCCTGATGAGCTTGATGAAG
AGTTTGACACATTCCCTACTTCTCGTCCGCCTGACATTGTGAGGATGCGTTATGACCGGC
TACGGAGTGTTGCTGGGAGGATACAGACCGTAGTCGGCGATCTCGCGACACAAGGAGAAA
GGCTGCAGTCCCTGCTAAGCTGGAGAGACCCAAGAGCCACGGCGCTCTTTGTGACCTTCT
GCTTTGTTGCTGCCATTGTCCTCTACGTGACTCCATTCCGTGTTGTGGTCTTCCTTGCAG
GCCTGTACACCTTGAGACACCCAAGGTTCCGCCACAAGATGCCCTCTGTTCCTCTGAACT
TCTTCAGGAGGCTCCCTGCAAGAACTGATAGCATGTTGTAAGCTCGACTGCCTCATGCTA
TGCTATCGAGCTGCCCAGGCGATGGCTGCAATGCATAAGAAATTGGAGAAACCTGAACTC
TTATCTATTCTCTTTTTTGTAGTCTATCAGTTGCATGGTTATGTATGTCTTCAGGTGGTT
TTGAACCTTTCATGTAACTGCTGAACGCATTATGTGACTGGATTTGCATGTATGGTGCGT
GCGGGAAATTTGTTCGTGGTCATCACCTGTCATCGGGAGGCTTACTGGGCATGTCATCTC
ATACATATTGCATTCTGTATAATTCCATCAGATATGTGCCCCTGAATTTAGGCTAGTTGT
GTTAAGGATGATGACTGACATTTGGGCTGCAGGAAGAAATTTGTGTTAATCTGTGCTCGG
CAATTCTAAGTGCAGGCATTAACCCTGACCAATCTGTGGCCCATCCTGTTGAGTGATCTG
TTGTTTTGTGATTTGTGCTGATTGCCTTGGAGCCTGAACAAATTTTTTGGCAGCT

consensusID : consensus_10040#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 694
fasta sequence 
                              [GAGAGTGCTCATCCTGATGAGCTTGATGAAGAGTNTGACACATTCCCTACTTCTCGTCCGCCTGACATTGTGAGGATGCGTTATGACCGGCTACGGAGTGTTGCTGGGAGGATACAGACCGTAGTCGGCGATCTCGCGACACAAGGAGAAAGGCTGCAGTCCCTGCTAAGCTGGAGAGACCCAAGAGCCACGGCGCTCTTTGTGACCTTCTGCTTTGTTGCTGCCATTGTCCCCTACGTGACTCCATTCCGTGTTGTGGTCTTCCTTGCAGGCCTGTACACCTTGAGACACCCAAGGTTCCGCCACAAGATGCCCTCTGTTCCTCTGAACTTCTTCAGGAGGCTCCCTGCAAGAACTGATAGCATGTTGTAAGCTCGACTGCCTCATGCTATGCTATCGAGCTGCCCAGGCGATGGCTGCAATGCATAAAAAATTGGAGATACCTGAACTCTTATCTATTCTCTTTTTTGTAGTCTATCAGTTGCATGGTTATGTATGTCTTCAGGTGGTTTTGAACCTTTCATGTAACTGCTGAACGCATTATGTGACTGGATTTGCATGTATGGTGCGTGCGGGAAATTTGTTCGTGGTCATCACCTGTCATCGGGAGGCTTACTGGGCATGTCATCTCATACATATTGCATTCTGTATAATTCCATCAGATATGTGCCCCTGAATTTAAAAAAAAAAAAAA]

[-] EMBL CA759474             [GAGAGTGCTCATCCTGATGAGCTTGATGAAGAGTNTGACACATTCCCTACTTCTCGTCCGCCTGACATTGTGAGGATGCGTTATGACCGGCTACGGAGTGTTGCTGGGAGGATACAGACCGTAGTCGGCGATCTCGCGACACAAGGAGAAAGGCTGCAGTCCCTGCTAAGCTGGAGAGACCCAAGAGCCACGGCGCTCTTTGTGACCTTCTGCTTTGTTGCTGCCATTGTCCCCTACGTGACTCCATTCCGTGTTGTGGTCTTCCTTGCAGGCCTGTACACCTTGAGACACCCAAGGTTCCGCCACAAGATGCCCTCTGTTCCTCTGAACTTCTTCAGGAGGCTCCCTGCAAGAACTGATAGCATGTTGTAAGCTCGACTGCCTCATGCTATGCTATCGAGCTGCCCAGGCGATGGCTGCAATGCATAAAAAATTGGAGATACCTGAACTCTTATCTATTCTCTTTTTTGTAGTCTATCAGTTGCATGGTTATGTATGTCTTCAGGTGGTTTTGAACCTTTCATGTAACTGCTGAACGCATTATGTGACTGGATTTGCATGTATGGTGCGTGCGGGAAATTTGTTCGTGGTCATCACCTGTCATCGGGAGGCTTACTGGGCATGTCATCTCATACATATTGCATTCTGTATAATTCCATCAGATATGTGCCCCTGAATTTAAAAAAAAAAAAAA]




>consensus_10040#1
GAGAGTGCTCATCCTGATGAGCTTGATGAAGAGTNTGACACATTCCCTACTTCTCGTCCG
CCTGACATTGTGAGGATGCGTTATGACCGGCTACGGAGTGTTGCTGGGAGGATACAGACC
GTAGTCGGCGATCTCGCGACACAAGGAGAAAGGCTGCAGTCCCTGCTAAGCTGGAGAGAC
CCAAGAGCCACGGCGCTCTTTGTGACCTTCTGCTTTGTTGCTGCCATTGTCCCCTACGTG
ACTCCATTCCGTGTTGTGGTCTTCCTTGCAGGCCTGTACACCTTGAGACACCCAAGGTTC
CGCCACAAGATGCCCTCTGTTCCTCTGAACTTCTTCAGGAGGCTCCCTGCAAGAACTGAT
AGCATGTTGTAAGCTCGACTGCCTCATGCTATGCTATCGAGCTGCCCAGGCGATGGCTGC
AATGCATAAAAAATTGGAGATACCTGAACTCTTATCTATTCTCTTTTTTGTAGTCTATCA
GTTGCATGGTTATGTATGTCTTCAGGTGGTTTTGAACCTTTCATGTAACTGCTGAACGCA
TTATGTGACTGGATTTGCATGTATGGTGCGTGCGGGAAATTTGTTCGTGGTCATCACCTG
TCATCGGGAGGCTTACTGGGCATGTCATCTCATACATATTGCATTCTGTATAATTCCATC
AGATATGTGCCCCTGAATTTAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10040#0      GATCTGATCTTTTTTCTGCTCTCTCTTGTGTGTTTTTTCGAGTTGTTTGTGGTTGCTCAC 60
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      CTCTTGTGCACCGGCAATGGCAGGCTTGAGCAGCGTTTCTTGCTCGGCGGCGGCGGCGGC 120
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      GGCGGCGGTTGCTAGATCTCCGGCGTGACACCGGTCGGAATGGGCTGGATGTCGACGGGG 180
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      ACGACGTTCGGGCGTTGATGGCAGGTGTGGTGTTCCCATGATTGATGATGTGGAGATACT 240
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      GGGATGGTTCGAGATGAAGAAAATGCTTGTGAGGTGCTCTGTTGAGAGAAACCTTATTAC 300
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      CTGATGACTTGTTAATTCGAAGTTATTCTAGCACACCAGTTGCTGCTGGTTGGATCTTTT 360
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      TCTTTCATTGCTGAGTAGGAGCGTAGGAGTTGGTTGGTTCAAGAATTTCGTTCAAGATGA 420
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      TGCAGAGGCCGTTCCGTCCGGAGGAGTACTCCTTGAAGGAGACTTCTCCTCACCTTGGTG 480
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      GTGGAGCTGCTGGTGACAAGCTCACCACCACCTATGACTTGGTTGAGCAGATGCAGTATC 540
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      TTTATGTCCGGGTAGTAAAAGCTAAGGACCTTCCAAGCAAGGACATCACTGGAAGCTGTG 600
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      ACCCATATGTTGAGGTGAAGCTTGGGAATTATAAGGGTACAACTCGGCATTTCGAGAAGA 660
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      AGACTAATCCTGAGTGGAACCAGGTCTTTGCCTTTTCTAAGGAGCGCATTCAGTCATCAG 720
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      TGGTTGAGATCATTGTCAAGGATAAGGACTTTGTCAAGGATGACTTCATCGGGCGGGTGT 780
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      TGTTTGACCTGAATGAGGTCCCAAAACGAGTGCCACCTGACAGCCCATTGGCTCCACAGT 840
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      GGTATCGGTTGGAAGAGCGGAATGGACACAAGGTGAAGGGAGAGTTGATGTTGGCCGTTT 900
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      GGATGGGTACTCAAGCAGATGAAGCATTCCCTGAAGCTTGGCACTCTGATGCAGCGTCGA 960
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      TCCCAGGAGATGGACTTGCAAGTATTAGATCAAAAGTTTACCTTACTCCAAAGCTTTGGT 1020
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      ATCTGAGAGTCAATGTCATTGAGGCACAAGATCTTATACCAAATGACAGGACCAGGTTCC 1080
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      CTGATGTTTATGTCAAAGCCATGCTAGGTAACCAAGCTCTTAGAACCCGGGTATCACCAA 1140
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      GCCGGACGCTGAATCCAATGTGGAATGAGGATTTAATGTTTGTTGCTGCTGAACCATTCG 1200
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      AGGAACACCTGATTCTGAGTGTAGAAGATAGGATTGCCCCAGGGAAGGATGATGTACTTG 1260
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      GAAGGACAATCATTTCTCTGCAGCACGTACCTCGGAGGCTGGATCACAAGTTGCTGAACA 1320
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      GCCAGTGGTACAATCTTGAGACGCATGTAATTGTGGATGGCGAGCAGAAGAAAGAGACCA 1380
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      AATTTTCAAGCCGGATTCACTTGAGAATATGCCTCGAAGGTGGATATCATGTCTTGGATG 1440
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      AGTCAACACATTACAGCAGTGATTTGAGGCCAACTGCTAAACAGTTATGGAAGCACAGCA 1500
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      TTGGCATTCTTGAGTTGGGTATCTTGACAGCACAGGGCCTGTTGCCGATGAAGACCAAGG 1560
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      ATGGGCGTGGAACAACTGATGCTTATTGTGTTGCTAAGTATGGGCAGAAGTGGGTGCGGA 1620
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      CAAGGACTATTATTGATAGTTTCACACCCAAGTGGAATGAACAATACACTTGGGAGGTGT 1680
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      ATGATCCCTGCACTGTGATCACTATTGGTGTATTTGACAATTGCCACTTGAATGGTGGGG 1740
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      AAAAAGCCAACGGTGCCCGGGATACCAGAATTGGGAAGGTCCGCATCCGCCTCTCTACGC 1800
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      TAGAAACTGATCGAGTATATACTCATGCTTACCCTCTGATTGTTCTGACACCTGCTGGTG 1860
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      TTAAGAAAATGGGGGAGGTGCAGCTTGCTGTCAGGTTCACATGCTCATCACTGCTGAACA 1920
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      TGATGCATCTGTATTCACAACCATTGCTGCCCAAGATGCACTATGTACACCCATTGTCCG 1980
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      TGATGCAGGTAGACAATCTAAGGCGCCAAGCCACCAACATTGTATCAACAAGGCTGAGCC 2040
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      GTGCAGAACCACCACTGCGGAAGGAAATTGTGGAGTACATGCTGGATGTTGACTCTCATA 2100
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      TGTGGAGCATGCGGAAGAGCAAGGCAAACTTTTTCCGTATCATGGGTGTCCTAAGCCCTC 2160
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      TGATTGCGGTGGCCAAGTGGTTTGATCAGATCTGCCATTGGAGAAATCCGCTGACCACCA 2220
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      TACTGATCCACATTCTCTTTGTGATTTTAGTCTTGTATCCTGAGCTGATACTGCCAACAA 2280
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      TCTTCCTCTACCTGTTCCTGATTGGAGTGTGGTACTACCGCTGGCGGCCAAGGCAGCCAC 2340
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      CTCACATGGACACTCGCCTCTCACATGCGGAGAGTGCTCATCCTGATGAGCTTGATGAAG 2400
consensus_10040#1      -----------------------------GAGAGTGCTCATCCTGATGAGCTTGATGAAG 31
                                                    *******************************

consensus_10040#0      AGTTTGACACATTCCCTACTTCTCGTCCGCCTGACATTGTGAGGATGCGTTATGACCGGC 2460
consensus_10040#1      AGTNTGACACATTCCCTACTTCTCGTCCGCCTGACATTGTGAGGATGCGTTATGACCGGC 91
                       *** ********************************************************

consensus_10040#0      TACGGAGTGTTGCTGGGAGGATACAGACCGTAGTCGGCGATCTCGCGACACAAGGAGAAA 2520
consensus_10040#1      TACGGAGTGTTGCTGGGAGGATACAGACCGTAGTCGGCGATCTCGCGACACAAGGAGAAA 151
                       ************************************************************

consensus_10040#0      GGCTGCAGTCCCTGCTAAGCTGGAGAGACCCAAGAGCCACGGCGCTCTTTGTGACCTTCT 2580
consensus_10040#1      GGCTGCAGTCCCTGCTAAGCTGGAGAGACCCAAGAGCCACGGCGCTCTTTGTGACCTTCT 211
                       ************************************************************

consensus_10040#0      GCTTTGTTGCTGCCATTGTCCTCTACGTGACTCCATTCCGTGTTGTGGTCTTCCTTGCAG 2640
consensus_10040#1      GCTTTGTTGCTGCCATTGTCCCCTACGTGACTCCATTCCGTGTTGTGGTCTTCCTTGCAG 271
                       ********************* **************************************

consensus_10040#0      GCCTGTACACCTTGAGACACCCAAGGTTCCGCCACAAGATGCCCTCTGTTCCTCTGAACT 2700
consensus_10040#1      GCCTGTACACCTTGAGACACCCAAGGTTCCGCCACAAGATGCCCTCTGTTCCTCTGAACT 331
                       ************************************************************

consensus_10040#0      TCTTCAGGAGGCTCCCTGCAAGAACTGATAGCATGTTGTAAGCTCGACTGCCTCATGCTA 2760
consensus_10040#1      TCTTCAGGAGGCTCCCTGCAAGAACTGATAGCATGTTGTAAGCTCGACTGCCTCATGCTA 391
                       ************************************************************

consensus_10040#0      TGCTATCGAGCTGCCCAGGCGATGGCTGCAATGCATAAGAAATTGGAGAAACCTGAACTC 2820
consensus_10040#1      TGCTATCGAGCTGCCCAGGCGATGGCTGCAATGCATAAAAAATTGGAGATACCTGAACTC 451
                       ************************************** ********** **********

consensus_10040#0      TTATCTATTCTCTTTTTTGTAGTCTATCAGTTGCATGGTTATGTATGTCTTCAGGTGGTT 2880
consensus_10040#1      TTATCTATTCTCTTTTTTGTAGTCTATCAGTTGCATGGTTATGTATGTCTTCAGGTGGTT 511
                       ************************************************************

consensus_10040#0      TTGAACCTTTCATGTAACTGCTGAACGCATTATGTGACTGGATTTGCATGTATGGTGCGT 2940
consensus_10040#1      TTGAACCTTTCATGTAACTGCTGAACGCATTATGTGACTGGATTTGCATGTATGGTGCGT 571
                       ************************************************************

consensus_10040#0      GCGGGAAATTTGTTCGTGGTCATCACCTGTCATCGGGAGGCTTACTGGGCATGTCATCTC 3000
consensus_10040#1      GCGGGAAATTTGTTCGTGGTCATCACCTGTCATCGGGAGGCTTACTGGGCATGTCATCTC 631
                       ************************************************************

consensus_10040#0      ATACATATTGCATTCTGTATAATTCCATCAGATATGTGCCCCTGAATTTAGGCTAGTTGT 3060
consensus_10040#1      ATACATATTGCATTCTGTATAATTCCATCAGATATGTGCCCCTGAATTTAAAAAAAAAAA 691
                       **************************************************    *     

consensus_10040#0      GTTAAGGATGATGACTGACATTTGGGCTGCAGGAAGAAATTTGTGTTAATCTGTGCTCGG 3120
consensus_10040#1      AAA--------------------------------------------------------- 694
                                                                                   

consensus_10040#0      CAATTCTAAGTGCAGGCATTAACCCTGACCAATCTGTGGCCCATCCTGTTGAGTGATCTG 3180
consensus_10040#1      ------------------------------------------------------------
                                                                                   

consensus_10040#0      TTGTTTTGTGATTTGTGCTGATTGCCTTGGAGCCTGAACAAATTTTTTGGCAGCT 3235
consensus_10040#1      -------------------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)