These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10046#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 3398 fasta sequence [CTCTCTCTCTCTCTCTCCCGTGTCCGCAACCGCAAATCCCCATTTGGTCTCACCTAAAACCCTAGCTCGCTCACCCATGGCTCCGAAGAAGCGAAAGGCGGATCCGGCGGAGTCCCCGGTAGCCTCGTCGGAGGCCGGCGCCGGCACCAACCACCACCAGGAGACGCCCTCCTCGGAGCTCAAGCCCCGGGGGACCATCTACTTCCCCATCACCGACGACCCCCCGGAGCCGAGCGCAGAGGGCGGCGCCGAGGGGGAGGACGGCGCCGGAGGGGACGACGATGAGGAGGACATCGCGAAGCTGCTCGAGCCCCTGTCGCGGGAGCAGCTGGTGGCGCTGCTCCGCACGGCCGCGGAGACTACCCCCGCGACGATGGCGGCCGTGCGGCGCGCGGCGGAGGCCGACCCCGCGAGCAGGAAGCTCTTCGTCCACGGCCTCGGCTGGGGCGCCGGAGCCGACGACCTCCGCTCCGCGTTCTCCCGCTTCGGCGAGCTCGAGGACTGCCGTGTCATCTCCGACAAGCAATCTGGCAGATCTAAGGGCTACGGCTTCGTCCTCTTCCGCTCCCGCCGCTCCGCGCTCCGCGCCCTCCGCCGCCCCCAGCTCCAAATCGGCGGCCGCCTTGCTTTCTGCCATCTCGCTGCCTCGGGTCCTGCCCCTCCGACCTCCCAGTCCCAGAACCCTAGCTCCAACACCAACGCCAACTCCGGTGCGGCCAATAACGCTGGTTCTGCGTCGTCTTCACAACCTGACAACATGCAACGCAAAATCTTTGTTGGTAACGTGCATGCTGATGTCGATGTTGACCGCCTGTATGAGTACTTCTCGCAATTTGGTGAGATTGAGGAGGGGCCATTGGGATTTGACAAGACCACTGGCAAGCCTAAGGGGTTTGCGCTGTTCGTCTACAAGTCAGTGGAGAGCGCCCGCCGTGCGCT-GGAGGAGCCAACAAGGAACTTTGATGGCAAAATGCTCAATGTGCAGAAGGCTATAGATGGCAGGACCAAGAACACACCTGGGATGAATGCAAATTCTAACCCTAGTGGTACCGCTGCCTCGGCAGCAGCTGCTGCTGCAGCTGCACAGATGACTGCTCCTGCTACTGCTGCAATTACACCGTATGATGCATCAGCTTATGGTGCTACTGCCGTTCCTGACTTGGGTTATGCGCAGCAAGCGGCTATGTTGGGATTGGGTGCACAGCAGCAGGCGTTTGCACAACCCAATGCTGCAATGCTTGCCATGATGGCAGCAGCTATGCAAAACCCAGCTATGCTCGCAACGCTGAACCCTGCTTTTGCTGCTGCTGCATTGGGTGCTGGGGGCCAGCAGGTGCACGCGGCTGGTATTCCAGGTTTTGGAGCTCAGGGTTTTGGGACACAGGGCTTTGCAGCAGGTGCCGCCGCTTTTCCAAATGCAGCGGGTGTTCAAGCTCCTCCTGGTTTTCAGGGTCCGCCTGGGTTCCAGACTTCTGCTGGGTTTCAGGTTGGCCAAGCAGCTTCACAAGCGGGTACTGCTGCGGCTGCTGCCGCCGGTGCTGCTGGTTATCAGGCTGCTGCTGCTGGGCAGGGCCAAGTGCCCGGAACGCAAATTGGGGGTGCTGGTTTTCAGGGTGGATTTTGAAATCACTAGGTATAACAATTCACATCCTGCTTAATCGCTTCAAGTCCTCATTTACCACTAATGATTTGAGTTAGCTTATCCTCCAAATATTATTCGCAACTTGGTGATTTGGGCTAAAAATTTCTGATTGTTTCTCTATATCTTAGTTTGGCATCTGCTGGTCGTGATTCGTTCGTGTGGTTTTGCATTCGGATGGATTTTGAATCTATGTTGGTGCCAAAGTATTGCGAAAGGGTTCCTGCTGTTGGCTTTTACAATCAGATGGCTTTTGAATCAGGCAACTTTGTGGCAGTATTTACAGAAGGCGCTTTCTTGAAGAATTTATGTTGTTTTTATTGCCTACTATGTAGCTTTGTCCTTGCAACTTCATCATGTACGTTATGGTTTCTGTAATGGGGTTTAATGTACTGAAATATCTGTATTTTGACTTGTTGGGATGTTATCCGGTCTTATTGATTATGTCAAATGGTTTCTGGGCACTTGAAGGCTTTTTCTTTTTTGCAGTTGCAGTGGGATTTGGAAGAATGTGATATTCATAGCTTTTGCGTTCACCTTGGAAATTTCTGGTTTGAGGCTGAGTTCAGCTGCTATGACCTTAAGACCTTGATTGCCATTGAGCTTTATTTCTAAATCTGCATAGTGATCTCCTGTAGCCAACTAGCCATGGGAAATAGGTGAAAGTTCACTTTGCGTTTATAATCTCTTGAAAGAGTATAAATTAATGGATAATGCCTCATCAGCAAACACTGCATCTCCATTGGAGATTTTGGAATGTGCTTTTGTTTTTCTGATAAAGTAAGTATCTAGAACATTTCTATAGGATTCAAGCATAGTAATGGTACTGGCGCCCTGTGGACACTGCATAGGCTTGACTCTTTCTAGTGCGATGTGCTGATTGAAAAGTGCATACTAGGGTGTAGGTAATGTTCATCCTGTCATAAACTCATGCGGACTTTTTAGCTTGTGCTTGCTGTCAGAATGTGGTCCCTCTAAATATGAGCTGTTTTAGCAGAAGGTTATGGTCTGCTGACAGTGATCTTTGCTTTGTGCTGAGGAAGGATAGCATTCAAAACATTCATACAGCCCATAACCATATGTGTTCTATTTCTTATATGCACCATAAGCGCAATCATTAAGTACGGCAGTTGAAACCTTTGCTTTAGAGTTCTTATCCTATTGTCTATAGAGTCGCAACAACTATGCCCATCCATCAGATGTAGATCTGATTTTCAAAGTTGCCCCCCTTTCCAAATTTGTCACAAAACCATCTAGTTTCAAGGCTTACAACAGTAGATCAAGCACACCAAATGGCTTTACATTGCTAAATGTCGTGAAGTTATTGTCACTAGCTAGAATTTGCGCATGATGAAGTTACAGAGACTATTGAGGTCTCCGTAAGTTTGCTACATATCATTTCCCTGTTATTTTCCATGTCATGGAAGAAATCTCCATCTAATTGATCAACTTTCACGTTTTGTCTGGTACAACTAAATTTTTGTTGTGAGAACTCGATTAGTCAATTATAGGCACCATTCTTGTTACAAATGAACATAATCTTTCATATGTGGTGGTAAAAATCTTTACAATATAATCATTACTGCTGAATTGTTGTTTATATTGTTGGATTTCCTTAGTATCATCTTTCTTGAAATGGATTTTTTTTTGTTTCTTCTAGTTGTGTATACTGGCAGCAGAGACGACCAGTTATTATTTGATGATGATTACATACTTCATGTATCCAATGGGTATATTGCTTTATATCTGGCAGTCACTA] [+] EMBL AK058405 [CTCTCTCTCTCTCTCTCCCGTGTCCGCAACCGCAAATCCCCATTTGGTCTCACCTAAAACCCTAGCTCGCTCACCCATGGCTCCGAAGAAGCGAAAGGCGGATCCGGCGGAGTCCCCGGTAGCCTCGTCGGAGGCCGGCGCCGGCACCAACCACCACCAGGAGACGCCCTCCTCGGAGCTCAAGCCCCGGGGGACCATCTACTTCCCCATCACCGACGACCCCCCGGAGCCGAGCGCAGAGGGCGGCGCCGAGGGGGAGGACGGCGCCGGAGGGGACGACGATGAGGAGGACATCGCGAAGCTGCTCGAGCCCCTGTCGCGGGAGCAGCTGGTGGCGCTGCTCCGCACGGCCGCGGAGACTACCCCCGCGACGATGGCGGCCGTGCGGCGCGCGGCGGAGGCCGACCCCGCGAGCAGGAAGCTCTTCGTCCACGGCCTCGGCTGGGGCGCCGGAGCCGACGACCTCCGCTCCGCGTTCTCCCGCTTCGGCGAGCTCGAGGACTGCCGTGTCATCTCCGACAAGCAATCTGGCAGATCTAAGGGCTACGGCTTCGTCCTCTTCCGCTCCCGCCGCTCCGCGCTCCGCGCCCTCCGCCGCCCCCAGCTCCAAATCGGCGGCCGCCTTGCTTTCTGCCATCTCGCTGCCTCGGGTCCTGCCCCTCCGACCTCCCAGTCCCAGAACCCTAGCTCCAACACCAACGCCAACTCCGGTGCGGCCAATAACGCTGGTTCTGCGTCGTCTTCACAACCTGACAACATGCAACGCAAAATCTTTGTTGGTAACGTGCATGCTGATGTCGATGTTGACCGCCTGTATGAGTACTTCTCGCAATTTGGTGAGATTGAGGAGGGGCCATTGGGATTTGACAAGACCACTGGCAAGCCTAAGGGGTTTGCGCTGTTCGTCTACAAGTCAGTGGAGAGCGCCCGCCGTGCGCT GGAGGAGCCAACAAGGAACTTTGATGGCAAAATGCTCAATGTGCAGAAGGCTATAGATGGCAGGACCAAGAACACACCTGGGATGAATGCAAATTCTAACCCTAGTGGTACCGCTGCCTCGGCAGCAGCTGCTGCTGCAGCTGCACAGATGACTGCTCCTGCTACTGCTGCAATTACACCGTATGATGCATCAGCTTATGGTGCTACTGCCGTTCCTGACTTGGGTTATGCGCAGCAAGCGGCTATGTTGGGATTGGGTGCACAGCAGCAGGCGTTTGCACAACCCAATGCTGCAATGCTTGCCATGATGGCAGCAGCTATGCAAAACCCAGCTATGCTCGCAACGCTGAACCCTGCTTTTGCTGCTGCTGCATTGGGTGCTGGGGGCCAGCAGGTGCACGCGGCTGGTATTCCAGGTTTTGGAGCTCAGGGTTTTGGGACACAGGGCTTTGCAGCAGGTGCCGCCGCTTTTCCAAATGCAGCGGGTGTTCAAGCTCCTCCTGGTTTTCAGGGTCCGCCTGGGTTCCAGACTTCTGCTGGGTTTCAGGTTGGCCAAGCAGCTTCACAAGCGGGTACTGCTGCGGCTGCTGCCGCCGGTGCTGCTGGTTATCAGGCTGCTGCTGCTGGGCAGGGCCAAGTGCCCGGAACGCAAATTGGGGGTGCTGGTTTTCAGGGTGGATTTTGAAATCACTAGGTATAACAATTCACATCCTGCTTAATCGCTTCAAGTCCTCATTTACCACTAATGATTTGAGTTAGCTTATCCTCCAAATATTATTCGCAACTTGGTGATTTGGGCTAAAAATTTCTGATTGTTTCTCTATATCTTAGTTTGGCATCTGCTGGTCGTGATTCGTTCGT ] [+] EMBL AK101408 [ AACCGCAAATCCCCATTTGGTCTCACCTAAAACCCTAGCTCGCTCACCCATGGCTCCGAAGAAGCGAAAGGCGGATCCGGCGGAGTCCCCGGTAGCCTCGTCGGAGGCCGGCGCCGGCACCAACCACCACCAGGAGACGCCCTCCTCGGAGCTCAAGCCCCGGGGGACCATCTACTTCCCCATCACCGACGACCCCCCGGAGCCGAGCGCAGAGGGCGGCGCCGAGGGGGAGGACGGCGCCGGAGGGGACGACGATGAGGAGGACATCGCGAAGCTGCTCGAGCCCCTGTCGCGGGAGCAGCTGGTGGCGCTGCTCCGCACGGCCGCGGAGACTACCCCCGCGACGATGGCGGCCGTGCGGCGCGCGGCGGAGGCCGACCCCGCGAGCAGGAAGCTCTTCGTCCACGGCCTCGGCTGGGGCGCCGGAGCCGACGACCTCCGCTCCGCGTTCTCCCGCTTCGGCGAGCTCGAGGACTGCCGTGTCATCTCCGACAAGCAATCTGGCAGATCTAAGGGCTACGGCTTCGTCCTCTTCCGCTCCCGCCGCTCCGCGCTCCGCGCCCTCCGCCGCCCCCAGCTCCAAATCGGCGGCCGCCTTGCTTTCTGCCATCTCGCTGCCTCGGGTCCTGCCCCTCCGACCTCCCAGTCCCAGAACCCTAGCTCCAACACCAACGCCAACTCCGGTGCGGCCAATAACGCTGGTTCTGCGTCGTCTTCACAACCTGACAACATGCAACGCAAAATCTTTGTTGGTAACGTGCATGCTGATGTCGATGTTGACCGCCTGTATGAGTACTTCTCGCAATTTGGTGAGATTGAGGAGGGGCCATTGGGATTTGACAAGACCACTGGCAAGCCTAAGGGGTTTGCGCTGTTCGTCTACAAGTCAGTGGAGAGCGCCCGCCGTGCGCT GGAGGAGCCAACAAGGAACTTTGATGGCAAAATGCTCAATGTGCAGAAGGCTATAGATGGCAGGACCAAGAACACACCTGGGATGAATGCAAATTCTAACCCTAGTGGTACCGCTGCCTCGGCAGCAGCTGCTGCTGCAGCTGCACAGATGACTGCTCCTGCTACTGCTGCAATTACACCGTATGATGCATCAGCTTATGGTGCTACTGCCGTTCCTGACTTGGGTTATGCGCAGCAAGCGGCTATGTTGGGATTGGGTGCACAGCAGCAGGCGTTTGCACAACCCAATGCTGCAATGCTTGCCATGATGGCAGCAGCTATGCAAAACCCAGCTATGCTCGCAACGCTGAACCCTGCTTTTGCTGCTGCTGCATTGGGTGCTGGGGGCCAGCAGGTGCACGCGGCTGGTATTCCAGGTTTTGGAGCTCAGGGTTTTGGGACACAGGGCTTTGCAGCAGGTGCCGCCGCTTTTCCAAATGCAGCGGGTGTTCAAGCTCCTCCTGGTTTTCAGGGTCCGCCTGGGTTCCAGACTTCTGCTGGGTTTCAGGTTGGCCAAGCAGCTTCACAAGCGGGTACTGCTGCGGCTGCTGCCGCCGGTGCTGCTGGTTATCAGGCTGCTGCTGCTGGGCAGGGCCAAGTGCCCGGAACGCAAATTGGGGGTGCTGGTTTTCAGGGTGGATTTTGAAATCACTAGGTATAACAATTCACATCCTGCTTAATCGCTTCAAGTCCTCATTTACCACTAATGATTTGAGTTAGCTTATCCTCCAAATATTATTCGCAACTTGGTGATTTGGGCTAAAAATTTCTGATTGTTTCTCTATATCTTAGTTTGGCATCTGCTGGTCGTGATTCGTTCGTGTGGTTTTGCATTCGGATGGATTTTGAATCTATGTTGGTGCCAAAGTATTGCGAAAGGGTTCCTGCTGTTGGCTTTTACAATCAGATGGCTTTTGAATCAGGCAACTTTGTGGCAGTATTTACAGAAGGCGCTTTCTTGAAGAATTTATGTTGTTTTTATTGCCTACTATGTAGCTTTGTCCTTGCAACTTCATCATGTACGTTATGGTTTCTGTAATGGGGTTTAATGTACTGAAATATCTGTATTTTGACTTGTTGGGATGTTATCCGGTCTTATTGATTATGTCAAATG ] [+] EMBL AK065789 [ GGTCTCACCTAAAACCCTAGCTCGCTCACCCATGGCTCCGAAGAAGCGAAAGGCGGATCCGGCGGAGTCCCCGGTAGCCTCGTCGGAGGCCGGCGCCGGCACCAACCACCACCAGGAGACGCCCTCCTCGGAGCTCAAG CCCGGGGGACCATCTACTTCCCCATCACCGACGACCCCCCGGAGCCGAGCGCAGAGGGCGGCGCCGAGGGGGAGGACGGCGCCGGAGGGGACGACGATGAGGAGGACATCGCGAAGCTGCTCGAGCCCCTGTCGCGGGAGCAGCTGGTGGCGCTGCTCCGCACGGCCGCGGAGACTACCCCCGCGACGATGGCGGCCGTGCGGCGCGCGGCGGAGGCCGACCCCGCGAGCAGGAAGCTCTTCGTCCACGGCCTCGGCTGGGGCGCCGGAGCCGACGACCTCCGCTCCGCGTTCTCCCGCTTCGGCGAGCTCGAGGACTGCCGTGTCATCTCCGACAAGCAATCTGGCAGATCTAAGGGCTACGGCTTCGTCCTCTTCCGCTCCCGCCGCTCCGCGCTCCGCGCCCTCCGCCGCCCCCAGCTCCAAATCGGCGGCCGCCTTGCTTTCTGCCATCTCGCTGCCTCGGGTCCTGCCCCTCCGACCTCCCAGTCCCAGAACCCTAGCTCCAACACCAACGCCAACTCCGGTGCGGCCAATAAC CTGGTTCTGCGTCGTCTTCACAACCTGACAACATGCAACGCAAAATCTTTGTTGGTAACGTGCATGCTGATGTCGATGTTGACCGCCTGTATGAGTACTTCTCGCAATTTGGTGAGATTGAGGAGGGGCCATTGGGATTTGACAAGACCACTGGCAAGCCTAAGGGGTTTGCGCTGTTCGTCTACAAGTCAGTGGAGAGCGCCCGCCGTGCGCT GGAGGAGCCAACGAGGAACTTTGATGGCAAAATGCTCAATGTGCAGAAGGCTATAGATGGCAGGACCAAGAACACACCTGGGATGAATGCAAATTCTAACCCTAGTGGTACCGCTGCCTCGGCAGCAGCTGCTGCTGCAGCTGCACAGATGACTGCTCCTGCTACTGCTGCAATTACACCGTATGATGCATCAGCTTATGGTGCTACTGCCGTTCCTGACTTGGGTTATGCGCAGCAAGCGGCTATGTTGGGATTGGGTGCACAGCAGCAGGCGTTTGCACAACCCAATGCTGCAATGCTTGCCATGATGGCAGCAGCTATGCAAAACCCAGCTATGCTCGCAACGCTGAACCCTGCTTTTGCTGCTGCTGCATTGGGTGCTGGGGGCCAGCAGGTGCACGCGGCTGGTATTCCAGGTTTTGGAGCTCAGGGTTTTGGGACACAGGGCTTTGCAGCAGGTGCCGCCGCTTTTCCAAATGCAGCGGGTGTTCAAGCTCCTCCTGGTTTTCAGGGTCCGCCTGGGTTCCAGACTTCTGCTGGGTTTCAGGTTGGCCAAGCAGCTTCACAAGCGGGTACTGCTGCGGCTGCTGCCGCCGGTGCTGCTGGTTATCAGGCTGCTGCTGCTGGGCAGGGCCAAGTGCCCGGAACGCAAATTGGGGGTGCTGGTTTTCAGGGTGGATTTTGAAATCACTAGGTATAACAATTCACATCCTGCTTAATCGCTTCAAGTCCTCATTTACCACTAATGATTTGAGTTAGCTTATCCTCCAAATATTATTCGCAACTTGGTGATTTGGGCTAAAAATTTCTGATTGTTTCTCTATATCTTAGTTTGGCATCTGCTGGTCGTGATTCGTTCGTGTGGTTTTGCATTCGGATGGATTTTGAATCTATGTTGGTGCCAAAGTATTGCGAAAGGGTTCCTGCTGTTGGCTTTTACAATCAGATGGCTTTTGAATCAGGCAACTTTGTGGCAGTATTTACAGAAGGCGCTTTCTTGAAGAATTTATGTTGTTTTTATTGCCTACTATGTAGCTTTGTCCTTGCAACTTCATCATGTACGTTATGGTTTCTGTAATGGGGTTTAATGTACTGAAATATCTGTATTTTGACTTGTTGGGATGTTATCCGGTCTTATTGATTATGTCAAATG ] [+] EMBL AK119286 [ CTCACCTAAAACCCTAGCTCGCTCACCCATGGCTCCGAAGAAGCGAAAGGCGGATCCGGCGGAGTCCCCGGTAGCCTCGTCGGAGGCCGGCGCCGGCACCAACCACCACCAGGAGACGCCCTCCTCGGAGCTCAAGCCCCGGGGGACCATCCACTTCCCCATCACCGACGACCCCCCGGAGCCGAGCGCAGAGGGCGGCGCCGAGGGGGAGGACGGCGCCGGAGGGGACGACGATGAGGAGGACATCGCGAAGCTGCTCGAGCCCCTGTCGCGGGAGCAGCTGGTGGCGCTGCTCCGCACGGCCGCGGAGACTACCCCCGCGACGATGGCGGCCGTGCGGCGCGCGGCGGAGGCCGACCCCGCGAGCAGGAAGCTCTTCGTCCACGGCCTCGGCTGGGGCGCCGGAGCCGACGACCTCCGCTCCGCGTTCTCCCGCTTCGGCGAGCTCGAGGACTGCCGTGTCATCTCCGACAAGCAATCTGGCAGATCTAAGGGCTACGGCTTCGTCCTCTTCCGCTCCCGCCGCTCCGCGCTCCGCGCCCTCCGCCGCCCCCAGCTCCAAATCGGCGGCCGCCTTGCTTTCTGCCATCTCGCTGCCTCGGGTCCTGCCCCTCCGACCTCCCAGTCCCAGAACCCTAGCTCCAACACCAACGCCAACTCCGGTGCGGCCAATAACGCTGGTTCTGCGTCGTCTTCACAACCTGACAACATGCAACGCAAAATCTTTGTTGGTAACGTGCATGCTGATGTCGACGTTGACCGCCTGTATGAGTACTTCTCGCAATTTGGTGAGATTGAGGAGGGGCCATTGGGATTTGACAAGACCACTGGCAAGCCTAAGGGGTTTGCGCTGTTCGTCTACAAGTCAGTGGAGAGCGCCCGCCGTGCGCT GGAGGAGCCAACAAGGAACTTTGATGGCAAAATGCTCAATGTGCAGAAGGCTATAGATGGCAGGACCAAGAACACACCTGGGATGAATGCAAATTCTAACCCTAGTGGTACCGCTGCCTCGGCAGCAGCTGCTGCTGCAGCTGCACAGATGACTGCTCCTGCTACTGCTGCAATTACACCGTATGATGCATCAGCTTATGGTGCTACTGCCGTTCCTGACTTGGGTTATGCGCAGCAAGCGGCTATGTTGGGATTGGGTGCACAGCAGCAGGCGTTTGCACAACCCAATGCTGCAATGCTTGCCATGATGGCAGCAGCTATGCAAAACCCAGCTATGCTCGCAACGCTGAACCCTGCTTTTGCTGCTGCTGCATTGGGTGCTGGGGGCCAGCAGGTGCACGCGGCTGGTATTCCAGGTTTTGGAGCTCAGGGTTTTGGGACACAGGGCTTTGCAGCAGGTGCCGCCGCTTTTCCAAATGCAGCGGGTGTTCAAGCTCCTCCTGGTTTTCAGGGTCCGCCTGGGTTCCAGACTTCTGCTGGGTTTCAGGTTGGCCAAGCAGCTTCACAAGCGGGTACTGCTGCGGCTGCTGCCGCCGGTGCTGCTGGTTATCAGGCTGCTGCTGCTGGGCAGGGCCAAGTGCCCGGAACGCAAATTGGGGGTGCTGGTTTTCAGGGTGGATTTTGAAATCACTAGGTATAACAATTCACATCCTGCTTAATCGCTTCAAGTCCTCATTTACCACTAATGATTTGAGTTAGCTTATCCTCCAAATATTATTCGCAACTTGGTGATTTGGGCTAAAAATTTCTGATTGTTTCTCTATATCTTAGTTTGGCATCTGCTGGTCGTGATTCGTTCGTGTGGTTTTGCATTCGGATGGATTTTGAATCTATGTTGGTGCCAAAGTATTGCGAAAGGGTTCCTGCTGTTGGCTTTTACAATCAGATGGCTTTTGAATCAGGCAGCTTTGTGGCAGTATTTACAGAAGGCGCTTTCTTGAAGAATTTATGTTGTTTTTATTGCCTACTATGTAGCTTTGTCCTTGCAACTTCATCATGTACGTTATGGTTTCTGTAATGGGGTTTAATGTACTGAAATATCTGTATTTTGACTTGTTGGGATGTTATCCGGTCTTATTGATTATGTCAAATGGTTTCTGGGCACTTGAAGGCTTTTTCTTTTTTGCAGTTGCAGTGGGATTTGGAAGAATGTGATATTCATAGCTTTTGCGTTCACCTTGGAAATTTCTGGTTTGAGGCTGAGTTCAGCTGCTATGACCTTAAGACCTTGATTGCCATTGAGCTTTATTTCTAAATCTGCATAGTGATCTCCTGTAGCCAACTAGCCATGGGAAATAGGTGAAAGTTCACTTTGCGTTTATAATCTCTTGAAAGAGTATAAATTAATGGATAATGCCTCATCAGCAAACACTGCATCTCCATTGGAGATTTTGGAATGTGCTTTTGTTTTTCTGATAAAGTAAGTATCTAGAACATTTCTATAGGATTCAAGCATAGTAATGGTACTGGCGCCCTGTGGACACTGCATAGGCTTGACTCTTTCTAGTGCGATGTGCTGATTGAAAAGTGCATACTAGGGTGTAGGTAATGTTCATCCTGTCATAAACTCATGCGGACTTTTTAGCTTGTGCTTGCTGTCAGAATGTGGTCCCTCTAAATATGAGCTGTTTTAGCAGAAGGTTATGGTCTGCTGACAGTGATCTTTGCTTTGTGCTGAGGAAGGATAGCATTCAAAACATTCATACAGCCCATAACCATATGTGTTCTATTTCTTATATGCACCATAAGCGCAATCATTAAGTACGGCAGTTGAAACCTTTGCTTTAGAGTTCTTATCCTATTGTCTATAGAGTCGCAACAACTATGCCCATCCATCAGATGTAGATCTGATTTTCAAAGTTGCCCCCCTTTCCAAATTTGTCACAAAACCATCTAGTTTCAAGGCTTACAACAGTAGATCAAGCACACCAAATGGCTTTACATTGCTAAATGTCGTGAAGTTATTGTCACTAGCTAGAATTTGCGCATGATGAAGTTACAGAGACTATTGAGGTCTCCGTAAGTTTGCTACATATCATTTCCCTGTTATTTTCCATGTCATGGAAGAAATCTCCATCTAATTGATCAACTTTCACGTTTTGTCTGGTACAACTAAATTTTTGTTGTGAGAACTCGATTAGTCAATTATAGGCACCATTCTTGTTACAAATGAACATAATCTTTCATATGTGGTGGTAAAAATCTTTACAATATAATCATTACTGCTGAATTGTTGTTTATATTGTTGGATTTCCTTAGTATCATCTTTCTTGAAATGGATTTTTTTTTGTTTCTTCTAGTTGTGTATACTGGCAGCAGAGACGACCAGTTATTATTTGATGATGATTACATACTTCATGTATCCAATGGGTATATTGCTTTATATCTGGCAGTCACTA] [+] EMBL AU070309 [ GCCATCNNGCTGCCTCGGGTCCTGCCCCTCCGACCTCCCAGTCCCAGAACCNTAGCTCCAACACCAACGCCAACTCCGGTGCGGCCAATAACGCTGGTTCTGCGTCGTCTTCACAACCTGACAACATGCAACGCAAAATCTTTGTTGGTAACGTGCATGNTGATGTCGATGTTGACCGCCTGTATGAGTACTTNTCGCAATTTGGTGAGATTGAGGAGGGGCCATTGGGATTTGACAAGACCACTGGCAAGCCTAAGGGGTTTGCGCTGTTCGTCTACAAGTCAGTGGAGAGCGCCCGCCGTGCGCTGGGAGGAGCCAACAAGGAACTTTGATGGGAAAATGCTCAATGTGCAGAAGGCTttt ] [+] EMBL CA999486 [ GCTGGGCAGGGCCAAGTGCCCGGAACGCAAATTGGGGGTGCTGGTTTTCAGGGTGGATTTTGAAATCACTAGGTATAACAATTCACATCCTGCTTAATCGCTTCAAGTCCTCATTTACCACTAATGATTTGAGTTAGCTTATCCTC ] consensusID : consensus_10046#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 537 fasta sequence [AACTTCTTTCCCCCTGTCTCCACCAACGCTCTCTGCTCTCTCCACTGGCGAGCACACTTAGAGAGGGACGAGGCAGGGAGGCCAGCGATGGAGGCGGGGAAGCCCGCCAGGGGGGGGGGTGAGATCGGGCCCGCGATGCCGCTGTTCCACCTGTCGCCTGCTCCGTTCCAGGAGATGTCTTCGTCAGAGCTCAAGCCCTGTGGGACCATCTACTTCCCCATCACCGACGACCCCCCGGAGCCGAGAGCGAAGGGCGACGCTTAGAGGGAGGACGGCGCCGGAGGGGACGAAGATGTGGGGGACATCATGAAGACGCCTCCGCTCCAACCACCGCCTACCCGGCTCCGCACCACCTGCCCGCTGCAGCTGCTGCAGCTCCGCCTGCCACACACCTCGCTCTACCGGTTGGCCGCTCCACCAGTATAGTGCAATCTATGTCCAACCATGGATTCTGTCGGAATATCATCGGTCTTACCACAACATTCTCCATTCCTGAAAATTCCTCATTGGGTAGATTCTATCAAAAGATCCTGCTGC] [-] EMBL CA765795 [AACTTCTTTCCCCCTGTCTCCACCAACGCTCTCTGCTCTCTCCACTGGCGAGCACACTTAGAGAGGGACGAGGCAGGGAGGCCAGCGATGGAGGCGGGGAAGCCCGCCAGGGGGGGGGGTGAGATCGGGCCCGCGATGCCGCTGTTCCACCTGTCGCCTGCTCCGTTCCAGGAGATGTCTTCGTCAGAGCTCAAGCCCTGTGGGACCATCTACTTCCCCATCACCGACGACCCCCCGGAGCCGAGAGCGAAGGGCGACGCTTAGAGGGAGGACGGCGCCGGAGGGGACGAAGATGTGGGGGACATCATGAAGACGCCTCCGCTCCAACCACCGCCTACCCGGCTCCGCACCACCTGCCCGCTGCAGCTGCTGCAGCTCCGCCTGCCACACACCTCGCTCTACCGGTTGGCCGCTCCACCAGTATAGTGCAATCTATGTCCAACCATGGATTCTGTCGGAATATCATCGGTCTTACCACAACATTCTCCATTCCTGAAAATTCCTCATTGGGTAGATTCTATCAAAAGATCCTGCTGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10046#0 ---CTCTCTCTCTCTCTCTCCCGTGTCCGCAACCGCAAATCCCCATT--TGGTCTCACCT 55 consensus_10046#1 AACTTCTTTCCCCCTGTCTCCACCAACGCTCTCTGCTC-TCTCCACTGGCGAGCACACTT 59 *** ** * ** ***** * * ** ** *** * * * *** * consensus_10046#0 AAAACCC-------TAGCTCGCTCACCCATGGCTCCGAAGAAGCGAAAGGCGGATCCGGC 108 consensus_10046#1 AGAGAGGGACGAGGCAGGGAGGCCAGCGATGGAGGCGGGGAAGCCCGCCAGGGGGGGGGG 119 * * ** * ** * **** ** ***** ** ** consensus_10046#0 GGAGTCCCCGGTAGCCTCGTCGGAGGCCGGCGCCGGCACCAACCAC-CACCAGGAGACGC 167 consensus_10046#1 TGAGATCGGGCCCGCGATGCCGCTGTTCCAC-CTGTCGCCTGCTCCGTTCCAGGAGATGT 178 *** * * ** * ** * * * * * * ** * * ******** * consensus_10046#0 CCTCCTCGGAGCTCAAGCCCCGGGGGACCATCTACTTCCCCATCACCGACGACCCCCCGG 227 consensus_10046#1 CTTCGTCAGAGCTCAAGCCCTGTGGGACCATCTACTTCCCCATCACCGACGACCCCCCGG 238 * ** ** ************ * ************************************* consensus_10046#0 AGCCGAGCGCAGAGGGCGGCGCCGAGGGGGAGGACGGCGCCGGAGGGGACGACGATGAGG 287 consensus_10046#1 AGCCGAGAGCGAAGGGCGACGCTTAGAGGGAGGACGGCGCCGGAGGGGACGAAGATGTGG 298 ******* ** ****** *** ** ************************* **** ** consensus_10046#0 AGGACATCGCGAAGCTGCTCGAGCCCCTGTCGCGGGAGCAGCTGGTGGCGCTGCTCCGCA 347 consensus_10046#1 GGGACATCATGAAGACGCCTCCGCTCCAACCACCG--CCTACC--CGGCTCCGCACCACC 354 ******* **** ** ** ** * * * * * *** * ** ** * consensus_10046#0 CGGCCGCGGAGACTACCCCCGCGACGATGGCGGCCGTGCGGCGCGCGGC-GGAGGCCGAC 406 consensus_10046#1 TGCCCGCTGCAGCTGCTGCAGCTCCGCCTGCCAC-ACACCTCGCTCTACCGGTTGGCCGC 413 * **** * ** * * ** ** ** * * *** * * ** * * * consensus_10046#0 CCCGCGAGCAGGAAGCTCTTCGTCCACGGCCTCGGCTGGGGCGCCGGAGCCGACGACCTC 466 consensus_10046#1 TCCACCAGTATAGTGCAATCTATGTCCAACCATGGATTCTGTCGGAATATCATCGGTCTT 473 ** * ** * ** * * * ** ** * * * ** ** consensus_10046#0 CGCTCCGCGTTCTCCCGCTTCGGCGAGCTCGAGGACTGCCGTGTCATCTCCGACAAGCAA 526 consensus_10046#1 ACCACAACATTCTCC-ATTCCTGAAAATTCC----TCATTGGGTAGATTCTATCAAAAGA 528 * * * ****** * * * * ** * ** ** *** * consensus_10046#0 TCTGGCAGATCTAAGGGCTACGGCTTCGTCCTCTTCCGCTCCCGCCGCTCCGCGCTCCGC 586 consensus_10046#1 TCCTGCTGC--------------------------------------------------- 537 ** ** * consensus_10046#0 GCCCTCCGCCGCCCCCAGCTCCAAATCGGCGGCCGCCTTGCTTTCTGCCATCTCGCTGCC 646 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 TCGGGTCCTGCCCCTCCGACCTCCCAGTCCCAGAACCCTAGCTCCAACACCAACGCCAAC 706 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 TCCGGTGCGGCCAATAACGCTGGTTCTGCGTCGTCTTCACAACCTGACAACATGCAACGC 766 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 AAAATCTTTGTTGGTAACGTGCATGCTGATGTCGATGTTGACCGCCTGTATGAGTACTTC 826 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 TCGCAATTTGGTGAGATTGAGGAGGGGCCATTGGGATTTGACAAGACCACTGGCAAGCCT 886 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 AAGGGGTTTGCGCTGTTCGTCTACAAGTCAGTGGAGAGCGCCCGCCGTGCGCTGGAGGAG 946 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 CCAACAAGGAACTTTGATGGCAAAATGCTCAATGTGCAGAAGGCTATAGATGGCAGGACC 1006 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 AAGAACACACCTGGGATGAATGCAAATTCTAACCCTAGTGGTACCGCTGCCTCGGCAGCA 1066 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 GCTGCTGCTGCAGCTGCACAGATGACTGCTCCTGCTACTGCTGCAATTACACCGTATGAT 1126 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 GCATCAGCTTATGGTGCTACTGCCGTTCCTGACTTGGGTTATGCGCAGCAAGCGGCTATG 1186 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 TTGGGATTGGGTGCACAGCAGCAGGCGTTTGCACAACCCAATGCTGCAATGCTTGCCATG 1246 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 ATGGCAGCAGCTATGCAAAACCCAGCTATGCTCGCAACGCTGAACCCTGCTTTTGCTGCT 1306 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 GCTGCATTGGGTGCTGGGGGCCAGCAGGTGCACGCGGCTGGTATTCCAGGTTTTGGAGCT 1366 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 CAGGGTTTTGGGACACAGGGCTTTGCAGCAGGTGCCGCCGCTTTTCCAAATGCAGCGGGT 1426 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 GTTCAAGCTCCTCCTGGTTTTCAGGGTCCGCCTGGGTTCCAGACTTCTGCTGGGTTTCAG 1486 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 GTTGGCCAAGCAGCTTCACAAGCGGGTACTGCTGCGGCTGCTGCCGCCGGTGCTGCTGGT 1546 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 TATCAGGCTGCTGCTGCTGGGCAGGGCCAAGTGCCCGGAACGCAAATTGGGGGTGCTGGT 1606 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 TTTCAGGGTGGATTTTGAAATCACTAGGTATAACAATTCACATCCTGCTTAATCGCTTCA 1666 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 AGTCCTCATTTACCACTAATGATTTGAGTTAGCTTATCCTCCAAATATTATTCGCAACTT 1726 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 GGTGATTTGGGCTAAAAATTTCTGATTGTTTCTCTATATCTTAGTTTGGCATCTGCTGGT 1786 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 CGTGATTCGTTCGTGTGGTTTTGCATTCGGATGGATTTTGAATCTATGTTGGTGCCAAAG 1846 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 TATTGCGAAAGGGTTCCTGCTGTTGGCTTTTACAATCAGATGGCTTTTGAATCAGGCAAC 1906 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 TTTGTGGCAGTATTTACAGAAGGCGCTTTCTTGAAGAATTTATGTTGTTTTTATTGCCTA 1966 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 CTATGTAGCTTTGTCCTTGCAACTTCATCATGTACGTTATGGTTTCTGTAATGGGGTTTA 2026 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 ATGTACTGAAATATCTGTATTTTGACTTGTTGGGATGTTATCCGGTCTTATTGATTATGT 2086 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 CAAATGGTTTCTGGGCACTTGAAGGCTTTTTCTTTTTTGCAGTTGCAGTGGGATTTGGAA 2146 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 GAATGTGATATTCATAGCTTTTGCGTTCACCTTGGAAATTTCTGGTTTGAGGCTGAGTTC 2206 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 AGCTGCTATGACCTTAAGACCTTGATTGCCATTGAGCTTTATTTCTAAATCTGCATAGTG 2266 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 ATCTCCTGTAGCCAACTAGCCATGGGAAATAGGTGAAAGTTCACTTTGCGTTTATAATCT 2326 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 CTTGAAAGAGTATAAATTAATGGATAATGCCTCATCAGCAAACACTGCATCTCCATTGGA 2386 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 GATTTTGGAATGTGCTTTTGTTTTTCTGATAAAGTAAGTATCTAGAACATTTCTATAGGA 2446 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 TTCAAGCATAGTAATGGTACTGGCGCCCTGTGGACACTGCATAGGCTTGACTCTTTCTAG 2506 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 TGCGATGTGCTGATTGAAAAGTGCATACTAGGGTGTAGGTAATGTTCATCCTGTCATAAA 2566 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 CTCATGCGGACTTTTTAGCTTGTGCTTGCTGTCAGAATGTGGTCCCTCTAAATATGAGCT 2626 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 GTTTTAGCAGAAGGTTATGGTCTGCTGACAGTGATCTTTGCTTTGTGCTGAGGAAGGATA 2686 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 GCATTCAAAACATTCATACAGCCCATAACCATATGTGTTCTATTTCTTATATGCACCATA 2746 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 AGCGCAATCATTAAGTACGGCAGTTGAAACCTTTGCTTTAGAGTTCTTATCCTATTGTCT 2806 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 ATAGAGTCGCAACAACTATGCCCATCCATCAGATGTAGATCTGATTTTCAAAGTTGCCCC 2866 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 CCTTTCCAAATTTGTCACAAAACCATCTAGTTTCAAGGCTTACAACAGTAGATCAAGCAC 2926 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 ACCAAATGGCTTTACATTGCTAAATGTCGTGAAGTTATTGTCACTAGCTAGAATTTGCGC 2986 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 ATGATGAAGTTACAGAGACTATTGAGGTCTCCGTAAGTTTGCTACATATCATTTCCCTGT 3046 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 TATTTTCCATGTCATGGAAGAAATCTCCATCTAATTGATCAACTTTCACGTTTTGTCTGG 3106 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 TACAACTAAATTTTTGTTGTGAGAACTCGATTAGTCAATTATAGGCACCATTCTTGTTAC 3166 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 AAATGAACATAATCTTTCATATGTGGTGGTAAAAATCTTTACAATATAATCATTACTGCT 3226 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 GAATTGTTGTTTATATTGTTGGATTTCCTTAGTATCATCTTTCTTGAAATGGATTTTTTT 3286 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 TTGTTTCTTCTAGTTGTGTATACTGGCAGCAGAGACGACCAGTTATTATTTGATGATGAT 3346 consensus_10046#1 ------------------------------------------------------------ consensus_10046#0 TACATACTTCATGTATCCAATGGGTATATTGCTTTATATCTGGCAGTCACTA 3398 consensus_10046#1 ---------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||