cluster # 1006

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Oryza sativa
cluster # 1006 cluster # 1006 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1006#0 length = 599 sequences # 2

consensusID : consensus_1006#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 599
fasta sequence

                              [AACATTGATTAAAAATAGTGCACGTCTCTTACGACCTGTTCTATACACTCGAATAACCGTCAATGGAACACAAGATAAACCACCTTTTCCTAAAGTTCTACCCGTTGGATTACCATTACAAAATGAACTACCTGAGATCAAAGTCGTTCCTGACACACCGCCTAATCATCAAGTTTATCCGAACATGTCTCGACGATTGCTCGAATGTCGAGGAGTAGAATTAATCCATGATAAGCTTATTCACAAACAATATGGTATCATGGCTCTTGCTCCTGGCTTAATGAAAGAAAGTCATTTCAATACGATTCGTGATATGGTGAACAAACGCATTGATATGGAGAGATGTTTTTCGATATGGCGTGTCGATCCACCATGGCATCCATGGGACTTTAAAGGTTTAAATAAGAAACGTGGTGCTGGAAAGGGCAGTATAGACTATTTCGTTACTCCCGTGAAAGCC-ATCGAATGATTATTGAAATTGGTGGGACTCTATCGTATGATTATCTCTTTCGAACATTGTTAGCCATAACTGAAACTCTTTCCTTTCCGGCGATACCTGGTTCCTCAGAA-TATTAGATAATGGGGAACTTAACGAGAAA]

[+] EMBL CA754781             [AACATTGATTAAAAATAGTGCACGTCTCTTACGACCTGTTCTATACACTCGAATAACCGTCAATGGAACACAAGATAAACCACCTTTTCCTAAAGTTCTACCCGTTGGATTACCATTACAAAATGAACTACCTGAGATCAAAGTCGTTCCTGACACACCGCCTAATCATCAAGTTTATCCGAACATGTCTCGACGATTGCTCGAATGTCGAGGAGTAGAATTAATCCATGATAAGCTTATTCACAAACAATATGGTATCATGGCTCTTGCTCCTGGCTTAATGAAAGAAAGTCATTTCAATACGATTCGTGATATGGTGAACAAACGCATTGATATGGAGAGATGTTTTTCGATATGGCGTGTCGATCCACCATGGCATCCATGGGACTTTAAAGGTTTAAATAAGAAACGTGGTGCTGGAAAGGGCAGTATAGACTATTTCGTTACTCCCGTGAAAGCC ATCGAATGATTATTGAAATTGGTGGGACTCTATCGTATGATTATCTCTTTCGAACATTGTTAGCCATAACTGAAACTCTTTCCTTTCCGGCGATACCTGGTTCCTCAGAA TATTAGATAATGGGGAACTTAACGAGAAA]
[+] EMBL CA758863             [AACATTGATTAAAAATAGTGCACGTCTCTTACGACCTGTTCTATACACTCGAATAACCGTCAATGGAACACAAGATAAACCACCTTTTCCTAAAGTTCTACCCGTTGGATTACCATTACAAAATGAACTACCTGAGATCAAAGTCGTTCCTGACACACCGCCTAATCATCAAGTTTATCCGAACATGTCTCGACGATTGCTCGAATGTCGAGGAGTAGAATTAATCCATGATAAGCTTATTCACAAACAATATGGTATCATGGCTCTTGCTCCTGGCTTAATGAAAGAAAGTCATTTCAATACGATTCGTGATATGGTGAACAAACGCATTGATATGGAGAGATGTTTTTCGATATGGCGTGTCGATCCACCATGGCATCCATGGTACTTTAAAGGTTTAAATAAGAAACGTGGTGCTGGAAAGGGCAGTATAGACTATTTCGTTACTCCTGTGAAAGCCAATCGAATGATTATTGAAATTGGTGGTACTCTATCGTATGATTATCTCTATCGAACATTGTTAGCCATAGCTGAAGCTCTTCCATTTCCAGCGATACCTGTTTCTNCAGAATTATTAGAT                     ]




>consensus_1006#0
AACATTGATTAAAAATAGTGCACGTCTCTTACGACCTGTTCTATACACTCGAATAACCGT
CAATGGAACACAAGATAAACCACCTTTTCCTAAAGTTCTACCCGTTGGATTACCATTACA
AAATGAACTACCTGAGATCAAAGTCGTTCCTGACACACCGCCTAATCATCAAGTTTATCC
GAACATGTCTCGACGATTGCTCGAATGTCGAGGAGTAGAATTAATCCATGATAAGCTTAT
TCACAAACAATATGGTATCATGGCTCTTGCTCCTGGCTTAATGAAAGAAAGTCATTTCAA
TACGATTCGTGATATGGTGAACAAACGCATTGATATGGAGAGATGTTTTTCGATATGGCG
TGTCGATCCACCATGGCATCCATGGGACTTTAAAGGTTTAAATAAGAAACGTGGTGCTGG
AAAGGGCAGTATAGACTATTTCGTTACTCCCGTGAAAGCCATCGAATGATTATTGAAATT
GGTGGGACTCTATCGTATGATTATCTCTTTCGAACATTGTTAGCCATAACTGAAACTCTT
TCCTTTCCGGCGATACCTGGTTCCTCAGAATATTAGATAATGGGGAACTTAACGAGAAA

clustalw multiple alignements is not computed in this case