cluster # 10065

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Oryza sativa
cluster # 10065 cluster # 10065 Sequences # 7 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10065#0 length = 2705 sequences # 1
consensus_10065#1 length = 1807 sequences # 4

consensus_10065#2 length = 677 sequences # 1
consensus_10065#3 length = 614 sequences # 1

consensusID : consensus_10065#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2705
fasta sequence

                              [TTTAGAATGGTCGGTTGAACACCCAAACTTTCTACGTCAAATGTAAGATTTACCAGTTTTTTTTTCATAAGGCATACAAACTTTTTTTTTCATACGATCACCCCACGTATTGGACTTAATATCTTGTCTAGTTTAGTCCAGGGTGTAGTCACCATTTTGCTCGCACGAATTTTCTGTGGCTCTTGTCTAATGTTAGACGTGGCAAGATTAGCCATCAACCAAACACCTCGTCAATAGCAGAGAGGGTGTGATGTCACCGTGTTAAATTTTGACAATAAACCAAACAATAGCCAAAAAGGTGATCAAATTTGGTTAAAAAGTGTGATAAACTACGCCAATGGGACCAAAAGGACCTCAGAAGTATCTTCCGCTGAAAAAGTATCAAAAAAATTCACAAAAAGGGAATTACCAGCGAAAAGAAAACTAAGAAAAGTTTAAAGCACCGTATCCTGTTTTATTTTCTCTTTCTTGGAGCACTTTTGTTTTTATCTAATAACGATGATTACCTGCTCGTTGAGAAAAGTTCTCTATTTGTTCTTTGCCACTCGCTACAACATGGGAAGTGTGCTACTATTCCAACACTTGGAGTACTATTTTTACGCAATAACGATGATTACCTGCTCGTTAAGAAAAGCTTTCTACTTGTTCTTTGCCACTCGCTACAACATGGGAAGTGCTAGCACTACTATTCTAACGTGGAAAAGCAAGGCTGTTGCTTTCCCCCCCTTGAAACTGAAAAAAAAGGAGCCATCTTGTCATGTCCCAGAATCCAAAACCGGAAACCCCCCCTCTGCATCGGCAGGTCTCCTCCCCCCAACTTTGCCGCGGGATTCGTCGTCTCCATCACCACCGTGAGCAAAAGACCCACCACCACAAGTCACCCCCAACTCCGCCTGAAAAACAAGCATTATCCAGGGATAGACAGAGAGAGAAAGCAAAGCGGGATGCACCCAGCGGCAACTCGCAGGCTGAGGGAGGAATAACAAAATGTTCGGCAGGCAGCAGGGTCACTCATCACAGTCACAGATCGACGGCGACACAGCTGGTGGCCACTATCTTGGATCGAAATGGCCTGCACCTGTAGCTGCTCATCTGGACTTACTAAGCATGCACTACTACGAAGTAAGTAGTGGTAGTAGTAGTTGTGTTGTGTGTGCATACGCAAACGCAACGCAAGATGAGGAGGTGAGCCAATTGCCTGCTCCTGGACAGAATCGCCCTGAAAAGCCCCAATATTGATTTGGCCGACACAAGATGGTCTACGTGCAGGGGATTTACCCGCTGCCCAGTTGGCTCTATGCCATGCCGCTTTCAGTCTCTCTGATGCTGCAGATTCATCAGAGCTTATAAATACTTGGGCATCTGTGCTGTGCTGGAGGCATCCTGTGTTCTCAGGAGGTAGTAGTGCAGTGCAGTGCAGTGTAGAGACCTGTCCTTTGTGTTGTTTGCTCTCAAGCTCGCCGGAGAAGATAGAAGGGTGGCATGCCCGCCGTGGCCGGGAGCTTGTACATGGCGAGCCAGCACAAGGGAGTGCCTCCGCCGCTGCCGCCGCCGCCGCGGCCATTGCCGGTGATCAACCTGGGCCGGCTCACCATGGACAGTGCCTCGCGGGCGCTCGCCGTGCGGGATATCGTGCTGGCGTGCCGTGAACGTGGCTGCTTTGAGGTGGTGAACCATGGCATCAGCAGGTCTTGCATGAATGGCGCCCTCGAAGCCGCCTCCGAGTTCTTCCAGCTATCGACGGAGCGCAAGGAGGAGTTCGCGTCGGACGACATCCGGCAGCCCATCAGGTACGACACGAGCTCGAGGGACGGGATCAGCATGTCCAGGTCATTTCTGAAGCACTATGCCAATCCCCTGGACGACTGGATCAAGTTCTGGCCGACGCAGCCACCAACTTACAGGGAGAAAATGGGTGAGTACGCCGTGGAGACGCAGCGAGTGTCAATGCAGCTCATGGAAGCAATCCTGCAGGGCCTGGGATTAGGGCCATCGTACCTGCAAGAAAAGCTTGAAGGAGGGGTGCAGTTCGTGGCCTTGAACAACTACCCGCAGTCATCGGCGAAGAAAGCCGACAAGATCGGCTTGGCTCCTCACTCTGATTATGGCTTCCTCACCATCCTGTTGCAGAGCTCCCCAGGGCTTGAGGTGATGCACCATGAGGATGATGCCTGGACATCTGTCCCTGCTATCCCTGGGGCTCTCCATGTCCATGTAGGAGACCACCTGGAAGTGTTGAGCAATGGCCAGCTCAAGTCCCTTGTCCATCGAGCCGTTCTCAACCCAAACGAGTCAAGGATTTCTATTGCCAGCATCCATGGTCTCTCGATGGATGAAGAGGTCCACTGCGCCGAAGAGCTCGTCGATGAACACCACCCCAAAATGTACAGGGGAAGCAGCTTCCAGGACTTCCTGGACTTCCTGCCAGCAGACATGAACAGGTATAGGAGGTATGTCGAGAGCCTCAGGATCGACAAACCCTGAAGAGGAACAGTGGTAGTGCTGTATCAGAACATATATAGCAAGATGGCATTATTCGGATAAAGTATTTAAACCACCTAAAAACTCCTACTTCGGGAAGTTTGTTCGACTTTATGTTGGATTGTTGGTCAAAGAAAAAGTGATGTCAATCTGTACTGTGCAACACTGTAACACATGTAATCAATATTTAGTTATACATCCTTAGTAACTATAGCTACAAGAGT]

[+] EMBL AK119413             [TTTAGAATGGTCGGTTGAACACCCAAACTTTCTACGTCAAATGTAAGATTTACCAGTTTTTTTTTCATAAGGCATACAAACTTTTTTTTTCATACGATCACCCCACGTATTGGACTTAATATCTTGTCTAGTTTAGTCCAGGGTGTAGTCACCATTTTGCTCGCACGAATTTTCTGTGGCTCTTGTCTAATGTTAGACGTGGCAAGATTAGCCATCAACCAAACACCTCGTCAATAGCAGAGAGGGTGTGATGTCACCGTGTTAAATTTTGACAATAAACCAAACAATAGCCAAAAAGGTGATCAAATTTGGTTAAAAAGTGTGATAAACTACGCCAATGGGACCAAAAGGACCTCAGAAGTATCTTCCGCTGAAAAAGTATCAAAAAAATTCACAAAAAGGGAATTACCAGCGAAAAGAAAACTAAGAAAAGTTTAAAGCACCGTATCCTGTTTTATTTTCTCTTTCTTGGAGCACTTTTGTTTTTATCTAATAACGATGATTACCTGCTCGTTGAGAAAAGTTCTCTATTTGTTCTTTGCCACTCGCTACAACATGGGAAGTGTGCTACTATTCCAACACTTGGAGTACTATTTTTACGCAATAACGATGATTACCTGCTCGTTAAGAAAAGCTTTCTACTTGTTCTTTGCCACTCGCTACAACATGGGAAGTGCTAGCACTACTATTCTAACGTGGAAAAGCAAGGCTGTTGCTTTCCCCCCCTTGAAACTGAAAAAAAAGGAGCCATCTTGTCATGTCCCAGAATCCAAAACCGGAAACCCCCCCTCTGCATCGGCAGGTCTCCTCCCCCCAACTTTGCCGCGGGATTCGTCGTCTCCATCACCACCGTGAGCAAAAGACCCACCACCACAAGTCACCCCCAACTCCGCCTGAAAAACAAGCATTATCCAGGGATAGACAGAGAGAGAAAGCAAAGCGGGATGCACCCAGCGGCAACTCGCAGGCTGAGGGAGGAATAACAAAATGTTCGGCAGGCAGCAGGGTCACTCATCACAGTCACAGATCGACGGCGACACAGCTGGTGGCCACTATCTTGGATCGAAATGGCCTGCACCTGTAGCTGCTCATCTGGACTTACTAAGCATGCACTACTACGAAGTAAGTAGTGGTAGTAGTAGTTGTGTTGTGTGTGCATACGCAAACGCAACGCAAGATGAGGAGGTGAGCCAATTGCCTGCTCCTGGACAGAATCGCCCTGAAAAGCCCCAATATTGATTTGGCCGACACAAGATGGTCTACGTGCAGGGGATTTACCCGCTGCCCAGTTGGCTCTATGCCATGCCGCTTTCAGTCTCTCTGATGCTGCAGATTCATCAGAGCTTATAAATACTTGGGCATCTGTGCTGTGCTGGAGGCATCCTGTGTTCTCAGGAGGTAGTAGTGCAGTGCAGTGCAGTGTAGAGACCTGTCCTTTGTGTTGTTTGCTCTCAAGCTCGCCGGAGAAGATAGAAGGGTGGCATGCCCGCCGTGGCCGGGAGCTTGTACATGGCGAGCCAGCACAAGGGAGTGCCTCCGCCGCTGCCGCCGCCGCCGCGGCCATTGCCGGTGATCAACCTGGGCCGGCTCACCATGGACAGTGCCTCGCGGGCGCTCGCCGTGCGGGATATCGTGCTGGCGTGCCGTGAACGTGGCTGCTTTGAGGTGGTGAACCATGGCATCAGCAGGTCTTGCATGAATGGCGCCCTCGAAGCCGCCTCCGAGTTCTTCCAGCTATCGACGGAGCGCAAGGAGGAGTTCGCGTCGGACGACATCCGGCAGCCCATCAGGTACGACACGAGCTCGAGGGACGGGATCAGCATGTCCAGGTCATTTCTGAAGCACTATGCCAATCCCCTGGACGACTGGATCAAGTTCTGGCCGACGCAGCCACCAACTTACAGGGAGAAAATGGGTGAGTACGCCGTGGAGACGCAGCGAGTGTCAATGCAGCTCATGGAAGCAATCCTGCAGGGCCTGGGATTAGGGCCATCGTACCTGCAAGAAAAGCTTGAAGGAGGGGTGCAGTTCGTGGCCTTGAACAACTACCCGCAGTCATCGGCGAAGAAAGCCGACAAGATCGGCTTGGCTCCTCACTCTGATTATGGCTTCCTCACCATCCTGTTGCAGAGCTCCCCAGGGCTTGAGGTGATGCACCATGAGGATGATGCCTGGACATCTGTCCCTGCTATCCCTGGGGCTCTCCATGTCCATGTAGGAGACCACCTGGAAGTGTTGAGCAATGGCCAGCTCAAGTCCCTTGTCCATCGAGCCGTTCTCAACCCAAACGAGTCAAGGATTTCTATTGCCAGCATCCATGGTCTCTCGATGGATGAAGAGGTCCACTGCGCCGAAGAGCTCGTCGATGAACACCACCCCAAAATGTACAGGGGAAGCAGCTTCCAGGACTTCCTGGACTTCCTGCCAGCAGACATGAACAGGTATAGGAGGTATGTCGAGAGCCTCAGGATCGACAAACCCTGAAGAGGAACAGTGGTAGTGCTGTATCAGAACATATATAGCAAGATGGCATTATTCGGATAAAGTATTTAAACCACCTAAAAACTCCTACTTCGGGAAGTTTGTTCGACTTTATGTTGGATTGTTGGTCAAAGAAAAAGTGATGTCAATCTGTACTGTGCAACACTGTAACACATGTAATCAATATTTAGTTATACATCCTTAGTAACTATAGCTACAAGAGT]




>consensus_10065#0
TTTAGAATGGTCGGTTGAACACCCAAACTTTCTACGTCAAATGTAAGATTTACCAGTTTT
TTTTTCATAAGGCATACAAACTTTTTTTTTCATACGATCACCCCACGTATTGGACTTAAT
ATCTTGTCTAGTTTAGTCCAGGGTGTAGTCACCATTTTGCTCGCACGAATTTTCTGTGGC
TCTTGTCTAATGTTAGACGTGGCAAGATTAGCCATCAACCAAACACCTCGTCAATAGCAG
AGAGGGTGTGATGTCACCGTGTTAAATTTTGACAATAAACCAAACAATAGCCAAAAAGGT
GATCAAATTTGGTTAAAAAGTGTGATAAACTACGCCAATGGGACCAAAAGGACCTCAGAA
GTATCTTCCGCTGAAAAAGTATCAAAAAAATTCACAAAAAGGGAATTACCAGCGAAAAGA
AAACTAAGAAAAGTTTAAAGCACCGTATCCTGTTTTATTTTCTCTTTCTTGGAGCACTTT
TGTTTTTATCTAATAACGATGATTACCTGCTCGTTGAGAAAAGTTCTCTATTTGTTCTTT
GCCACTCGCTACAACATGGGAAGTGTGCTACTATTCCAACACTTGGAGTACTATTTTTAC
GCAATAACGATGATTACCTGCTCGTTAAGAAAAGCTTTCTACTTGTTCTTTGCCACTCGC
TACAACATGGGAAGTGCTAGCACTACTATTCTAACGTGGAAAAGCAAGGCTGTTGCTTTC
CCCCCCTTGAAACTGAAAAAAAAGGAGCCATCTTGTCATGTCCCAGAATCCAAAACCGGA
AACCCCCCCTCTGCATCGGCAGGTCTCCTCCCCCCAACTTTGCCGCGGGATTCGTCGTCT
CCATCACCACCGTGAGCAAAAGACCCACCACCACAAGTCACCCCCAACTCCGCCTGAAAA
ACAAGCATTATCCAGGGATAGACAGAGAGAGAAAGCAAAGCGGGATGCACCCAGCGGCAA
CTCGCAGGCTGAGGGAGGAATAACAAAATGTTCGGCAGGCAGCAGGGTCACTCATCACAG
TCACAGATCGACGGCGACACAGCTGGTGGCCACTATCTTGGATCGAAATGGCCTGCACCT
GTAGCTGCTCATCTGGACTTACTAAGCATGCACTACTACGAAGTAAGTAGTGGTAGTAGT
AGTTGTGTTGTGTGTGCATACGCAAACGCAACGCAAGATGAGGAGGTGAGCCAATTGCCT
GCTCCTGGACAGAATCGCCCTGAAAAGCCCCAATATTGATTTGGCCGACACAAGATGGTC
TACGTGCAGGGGATTTACCCGCTGCCCAGTTGGCTCTATGCCATGCCGCTTTCAGTCTCT
CTGATGCTGCAGATTCATCAGAGCTTATAAATACTTGGGCATCTGTGCTGTGCTGGAGGC
ATCCTGTGTTCTCAGGAGGTAGTAGTGCAGTGCAGTGCAGTGTAGAGACCTGTCCTTTGT
GTTGTTTGCTCTCAAGCTCGCCGGAGAAGATAGAAGGGTGGCATGCCCGCCGTGGCCGGG
AGCTTGTACATGGCGAGCCAGCACAAGGGAGTGCCTCCGCCGCTGCCGCCGCCGCCGCGG
CCATTGCCGGTGATCAACCTGGGCCGGCTCACCATGGACAGTGCCTCGCGGGCGCTCGCC
GTGCGGGATATCGTGCTGGCGTGCCGTGAACGTGGCTGCTTTGAGGTGGTGAACCATGGC
ATCAGCAGGTCTTGCATGAATGGCGCCCTCGAAGCCGCCTCCGAGTTCTTCCAGCTATCG
ACGGAGCGCAAGGAGGAGTTCGCGTCGGACGACATCCGGCAGCCCATCAGGTACGACACG
AGCTCGAGGGACGGGATCAGCATGTCCAGGTCATTTCTGAAGCACTATGCCAATCCCCTG
GACGACTGGATCAAGTTCTGGCCGACGCAGCCACCAACTTACAGGGAGAAAATGGGTGAG
TACGCCGTGGAGACGCAGCGAGTGTCAATGCAGCTCATGGAAGCAATCCTGCAGGGCCTG
GGATTAGGGCCATCGTACCTGCAAGAAAAGCTTGAAGGAGGGGTGCAGTTCGTGGCCTTG
AACAACTACCCGCAGTCATCGGCGAAGAAAGCCGACAAGATCGGCTTGGCTCCTCACTCT
GATTATGGCTTCCTCACCATCCTGTTGCAGAGCTCCCCAGGGCTTGAGGTGATGCACCAT
GAGGATGATGCCTGGACATCTGTCCCTGCTATCCCTGGGGCTCTCCATGTCCATGTAGGA
GACCACCTGGAAGTGTTGAGCAATGGCCAGCTCAAGTCCCTTGTCCATCGAGCCGTTCTC
AACCCAAACGAGTCAAGGATTTCTATTGCCAGCATCCATGGTCTCTCGATGGATGAAGAG
GTCCACTGCGCCGAAGAGCTCGTCGATGAACACCACCCCAAAATGTACAGGGGAAGCAGC
TTCCAGGACTTCCTGGACTTCCTGCCAGCAGACATGAACAGGTATAGGAGGTATGTCGAG
AGCCTCAGGATCGACAAACCCTGAAGAGGAACAGTGGTAGTGCTGTATCAGAACATATAT
AGCAAGATGGCATTATTCGGATAAAGTATTTAAACCACCTAAAAACTCCTACTTCGGGAA
GTTTGTTCGACTTTATGTTGGATTGTTGGTCAAAGAAAAAGTGATGTCAATCTGTACTGT
GCAACACTGTAACACATGTAATCAATATTTAGTTATACATCCTTAGTAACTATAGCTACA
AGAGT

consensusID : consensus_10065#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1807
fasta sequence

                              [CGGGATGCACCCAGCGGCAACTCGCAGGCTGAGGGAGGAATAACAAAATGTTCGGCAGGCAGCAGGGTCACTCATCACAGTCACAGATCGACGGCGACACAGCTGGTGGCCACTATCTTGGATCGAAATGGCCTGCACCTGTAGCTGCTCATCTGGACTTACTAAGCATGCACTACTACGAAGTAAGTAGTGGTAGTAGTAGTTGTGTTGTGTGTGCATACGCAAACGCAACGCAAGATGAGGAGGTGAGCCAATTGCCTGCTCCTGGACAGAATCGCCCTGAAAAGCCCCAATATTGATTTGGCCGATACAAGATGGTCTACGTGCAGGGGATTTACCCGCTGCCCAGTTGGCTCTATGCCATGCCGCTTTCAGTCTCTCTGATGCTGCAGATTCATCAGAGCTTATAAATACTTGGGCATCTGTGCTGTGCTGGAGGCATCCTGTGTTCTCAGGAGGTAGTAGTGCAGTGCAGTGCAGTGTAGAGACCTGTCCTCTGTGTTGTTTGCTCTCAAGCTCGCCGGAGAAGATAGAAGGGTGGCATGCCCGCCGTGGCCGGGAGCTTGTACATGGCGAGCCAGCACAAGGGAGTGCCTCCGCCGCTGCCGCCGCCGCCGCGGCCATTGCCGGTGATCAACCTGGGCCGGCTCACCATGGACAGTGCCTCGCGGGCGCTCGCCGTGCGGGATATCGTGCTGGCGTGCCGTGAACGTGGCTGCTTTGAGGTTAGTGCTGCTTACTTGTCACCACCCTGCATCCTCCTCTGCTTGTCCTGTCCTCCAACACCTGTCAGTTGTTATTACACATGCATGTGATACCAGACACAAGAATGTTTTGCTTACACGTACTCTCTCTTTCTCATAAAAAACGAATCTAGTACCGGATGTGACATGAATGTTTTGCTTACACGTAGTACGTGAAAAGGAAGCTGCTGCCAACTCATGAAAATGAGTAACAAAACTGCATCTGCATGCGAAACTGACGAACGCCAGATATACCAGAGACAGCTGATAGACCATTGTGCTCGACTTACCTGCAGGTGGTGAACCATGGCATCAGCAGGTCTTGCATGAATGGCGCCCTCGAAGCCGCCTCCGAGTTCTTCCAGCTATCGACGGAGCGCAAGGAGGAGTTCGCGTCGGACGACATCCGGCAGCCCATCAGGTACGACACGAGCTCGAGGGACGGGATCAGCATGTCCAGGTCATTTCTGAAGCACTATGCCAATCCCCTGGACGACTGGATCAAGTTCTGGCCGACGCAGCCACCAACTTACAGGTAACCTGCAAGAAAAGCTTGAAGGAGGGGTGCAGTTCGTGGCCTTGAACAACTACCCGCAGTCATCGGCGAAGAAAGCCGACAAGATCGGCTTGGCTCCTCACTCTGATTATGGCTTCCTCACCATCCTGTTGCAGAGCTCCCCAGGGCTTGAGGTGATGCACCATGAGGATGATGCCTGGACATCTGTCCCTGCTATCCCTGGGGCTCTCCATGTCCATGTAGGAGACCACCTGGAAGTGTTGAGCAATGGCCAGCTCAAGTCCCTTGTCCATCGAGCCGTTCTCAACCCAAACGAGTCAAGGATTTCTATTGCCAGCATCCATGGTCTCTCGATGGATGAAGAGGTCCACTGCGCCGAAGAGCTCGTCGATGAACACCACCCCAAAATGTACAGGGGAAGCAGCTTCCAGGACTTCCTGGACTTCCTTTCACTCAGACGAGGCCTCTCCTCTGGCTGCCACTCTGCTGCTTCGAGCTGCTGGTGCGGCTTCGTTTTCTCTCGTCTCCTCTCCAATCCTGGCGCTCC]

[-] EMBL AK107107             [CGGGATGCACCCAGCGGCAACTCGCAGGCTGAGGGAGGAATAACAAAATGTTCGGCAGGCAGCAGGGTCACTCATCACAGTCACAGATCGACGGCGACACAGCTGGTGGCCACTATCTTGGATCGAAATGGCCTGCACCTGTAGCTGCTCATCTGGACTTACTAAGCATGCACTACTACGAAGTAAGTAGTGGTAGTAGTAGTTGTGTTGTGTGTGCATACGCAAACGCAACGCAAGATGAGGAGGTGAGCCAATTGCCTGCTCCTGGACAGAATCGCCCTGAAAAGCCCCAATATTGATTTGGCCGATACAAGATGGTCTACGTGCAGGGGATTTACCCGCTGCCCAGTTGGCTCTATGCCATGCCGCTTTCAGTCTCTCTGATGCTGCAGATTCATCAGAGCTTATAAATACTTGGGCATCTGTGCTGTGCTGGAGGCATCCTGTGTTCTCAGGAGGTAGTAGTGCAGTGCAGTGCAGTGTAGAGACCTGTCCTCTGTGTTGTTTGCTCTCAAGCTCGCCGGAGAAGATAGAAGGGTGGCATGCCCGCCGTGGCCGGGAGCTTGTACATGGCGAGCCAGCACAAGGGAGTGCCTCCGCCGCTGCCGCCGCCGCCGCGGCCATTGCCGGTGATCAACCTGGGCCGGCTCACCATGGACAGTGCCTCGCGGGCGCTCGCCGTGCGGGATATCGTGCTGGCGTGCCGTGAACGTGGCTGCTTTGAGGTTAGTGCTGCTTACTTGTCACCACCCTGCATCCTCCTCTGCTTGTCCTGTCCTCCAACACCTGTCAGTTGTTATTACACATGCATGTGATACCAGACACAAGAATGTTTTGCTTACACGTACTCTCTCTTTCTCATAAAAAACGAATCTAGTACCGGATGTGACATGAATGTTTTGCTTACACGTAGTACGTGAAAAGGAAGCTGCTGCCAACTCATGAAAATGAGTAACAAAACTGCATCTGCATGCGAAACTGACGAACGCCAGATATACCAGAGACAGCTGATAGACCATTGTGCTCGACTTACCTGCAGGTGGTGAACCATGGCATCAGCAGGTCTTGCATGAATGGCGCCCTCGAAGCCGCCTCCGAGTTCTTCCAGCTATCGACGGAGCGCAAGGAGGAGTTCGCGTCGGACGACATCCGGCAGCCCATCAGGTACGACACGAGCTCGAGGGACGGGATCAGCATGTCCAGGTCATTTCTGAAGCACTATGCCAATCCCCTGGACGACTGGATCAAGTTCTGGCCGACGCAGCCACCAACTTACAGGTAACCTGCAAGAAAAGCTTGAAGGAGGGGTGCAGTTCGTGGCCTTGAACAACTACCCGCAGTCATCGGCGAAGAAAGCCGACAAGATCGGCTTGGCTCCTCACTCTGATTATGGCTTCCTCACCATCCTGTTGCAGAGCTCCCCAGGGCTTGAGGTGATGCACCATGAGGATGATGCCTGGACATCTGTCCCTGCTATCCCTGGGGCTCTCCATGTCCATGTAGGAGACCACCTGGAAGTGTTGAGCAATGGCCAGCTCAAGTCCCTTGTCCATCGAGCCGTTCTCAACCCAAACGAGTCAAGGATTTCTATTGCCAGCATCCATGGTCTCTCGATGGATGAAGAGGTCCACTGCGCCGAAGAGCTCGTCGATGAACACCACCCCAAAATGTACAGGGGAAGCAGCTTCCAGGACTTCCTGGACTTCCTTTCACTCAGACGAGGCCTCTCCTCTGGCTGCCACTCTGCTGCTTCGAGCTGCTGGTGCGGCTTCGTTTTCTCTCGTCTCCTCTCCAATCCTGGCGCTCC]
[+] EMBL CF325291             [                                                                                                                                                                                                                                                                             CAGAATCGCCCTGAAAAGCCCCAATATTGATTTGGCCGATACAAGATGGTCTACGTGCAGGGGATTTACCCGCTGCCCAGTTGGCTCTATGCCATGCCGCTTTCAGTCTCTCTGATGCTGCAGATTCATCAGAGCTTATAAATACTTGGGCATCTGTGCTGTGCTGGAGGCATCCTGTGTTCTCAGGAGGTAGTAGTGCAGTGCAGTGCAGTGTAGAGACCTGTCCTCTGTGTTGTTTGCTCTCAAGCTCGCCGGAGAAGATAGAAGGGTGGCATGCCCGCCGTGGCCGGGAGCTTGTACATGGCGAGCCAGCACAAGGGAGTGCCTCCGCCGCTGCCGCCGCCGCCGCGGCCATTGCCGGTGATCAACCTGGGCCGGCTCACCATGGACAGTGCTTCGCGGGCGCTCGCCGTGCGGGATATCGTGCTGGCGTGCCGTGAACGTGGCTGCTTTGAGGTTAGTGCTGCTTACTTGTCACCACCCTGCATCCTCCTCTGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF325237             [                                                                                                                                                                                                                                                                             CAGAATCGCCCTGAAAAGCCCCAATATTGATTTGGCCGATACAAGATGGTCTACGTGCAGGGGATTTACCCGCTGCCCAGTTGGCTCTATGCCATGCCGCTTTCAGTCTCTCTGATGCTGCAGATTCATCAGAGCTTATAAATACTTGGGCATCTGTGCTGTGCTGGAGGCATCCTGTGTTCTCAGGAGGTAGTAGTGCAGTGCAGTGCAGTGTAGAGACCTGTCCTCTGTGTTGTTTGCTCTCAAGCTCGCCGGAGAAGATAGAAGGGTGGCATGCCCGCCGTGGCCGGGAGCTTGTACATGGCGAGCCAGCACAAGGGAGTGCCTCCGCCGTTGCCGCCGCCGCCGCGGCCATTGCCGGTGATCAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CF325266             [                                                                                                                                                                                                                                                                             CAGAATCGCCCTGAAAAGCCCCAATATTGATTTGGCCGATACAAGATGGTCTACGTGCAGGGGATTTACCCGCTGCCCAGTTGGCTCTATGCCATGCCGCTTTCAGTCTCTCTGATGCTGCAGATTCATCAGAGCTTATAAATACTTGGGCATCTGTGCTGTGCTGGAGGCATCCTGTGTTCTCAGGAGGTAGTAGTGCAGTGCAGTGCAGTGTAGAGACCTGTCCTCTGTGTTGTTTGCTCTCAAGCTCGCCGGAGAAGATAGAAGGGTGGCATGCCCGCCGTGGCCGGGAGCTTGTACATGGCGAGCCAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]




>consensus_10065#1
CGGGATGCACCCAGCGGCAACTCGCAGGCTGAGGGAGGAATAACAAAATGTTCGGCAGGC
AGCAGGGTCACTCATCACAGTCACAGATCGACGGCGACACAGCTGGTGGCCACTATCTTG
GATCGAAATGGCCTGCACCTGTAGCTGCTCATCTGGACTTACTAAGCATGCACTACTACG
AAGTAAGTAGTGGTAGTAGTAGTTGTGTTGTGTGTGCATACGCAAACGCAACGCAAGATG
AGGAGGTGAGCCAATTGCCTGCTCCTGGACAGAATCGCCCTGAAAAGCCCCAATATTGAT
TTGGCCGATACAAGATGGTCTACGTGCAGGGGATTTACCCGCTGCCCAGTTGGCTCTATG
CCATGCCGCTTTCAGTCTCTCTGATGCTGCAGATTCATCAGAGCTTATAAATACTTGGGC
ATCTGTGCTGTGCTGGAGGCATCCTGTGTTCTCAGGAGGTAGTAGTGCAGTGCAGTGCAG
TGTAGAGACCTGTCCTCTGTGTTGTTTGCTCTCAAGCTCGCCGGAGAAGATAGAAGGGTG
GCATGCCCGCCGTGGCCGGGAGCTTGTACATGGCGAGCCAGCACAAGGGAGTGCCTCCGC
CGCTGCCGCCGCCGCCGCGGCCATTGCCGGTGATCAACCTGGGCCGGCTCACCATGGACA
GTGCCTCGCGGGCGCTCGCCGTGCGGGATATCGTGCTGGCGTGCCGTGAACGTGGCTGCT
TTGAGGTTAGTGCTGCTTACTTGTCACCACCCTGCATCCTCCTCTGCTTGTCCTGTCCTC
CAACACCTGTCAGTTGTTATTACACATGCATGTGATACCAGACACAAGAATGTTTTGCTT
ACACGTACTCTCTCTTTCTCATAAAAAACGAATCTAGTACCGGATGTGACATGAATGTTT
TGCTTACACGTAGTACGTGAAAAGGAAGCTGCTGCCAACTCATGAAAATGAGTAACAAAA
CTGCATCTGCATGCGAAACTGACGAACGCCAGATATACCAGAGACAGCTGATAGACCATT
GTGCTCGACTTACCTGCAGGTGGTGAACCATGGCATCAGCAGGTCTTGCATGAATGGCGC
CCTCGAAGCCGCCTCCGAGTTCTTCCAGCTATCGACGGAGCGCAAGGAGGAGTTCGCGTC
GGACGACATCCGGCAGCCCATCAGGTACGACACGAGCTCGAGGGACGGGATCAGCATGTC
CAGGTCATTTCTGAAGCACTATGCCAATCCCCTGGACGACTGGATCAAGTTCTGGCCGAC
GCAGCCACCAACTTACAGGTAACCTGCAAGAAAAGCTTGAAGGAGGGGTGCAGTTCGTGG
CCTTGAACAACTACCCGCAGTCATCGGCGAAGAAAGCCGACAAGATCGGCTTGGCTCCTC
ACTCTGATTATGGCTTCCTCACCATCCTGTTGCAGAGCTCCCCAGGGCTTGAGGTGATGC
ACCATGAGGATGATGCCTGGACATCTGTCCCTGCTATCCCTGGGGCTCTCCATGTCCATG
TAGGAGACCACCTGGAAGTGTTGAGCAATGGCCAGCTCAAGTCCCTTGTCCATCGAGCCG
TTCTCAACCCAAACGAGTCAAGGATTTCTATTGCCAGCATCCATGGTCTCTCGATGGATG
AAGAGGTCCACTGCGCCGAAGAGCTCGTCGATGAACACCACCCCAAAATGTACAGGGGAA
GCAGCTTCCAGGACTTCCTGGACTTCCTTTCACTCAGACGAGGCCTCTCCTCTGGCTGCC
ACTCTGCTGCTTCGAGCTGCTGGTGCGGCTTCGTTTTCTCTCGTCTCCTCTCCAATCCTG
GCGCTCC

consensusID : consensus_10065#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 677
fasta sequence

                              [CCAGTTCGTGGCCTTGACCAACTACCCGCAGTCATTGGCGGAAGAAAGCCGCCAAGATTGGCTTGGCTCCTCACTCTGATTATGGCTTCCTCACCATCCTTGTTGCAGAGCTCCCCAGGGCTTGAGGTGATGCCCCATGAGGATGATGCCTGGACATCTGTCCCTGCTATCCCTGGGGCTCTCCATGTCCATGTAGGAGACCACCTGGAAGTGTTGAGCAATGGCCAGCTCAAGTCCCTTGTCCATCGAGCCGTTCTCAACCCAAACGAGTCAAGGATTTCTATTGCCAGCATCCATGGTCTCTCGATGGATGAAGAGGTCCACTGCGCCGAAGAGCTCGTCGATGAACACCACCCCAAAATGTACAGGGGAAGCAGCTTCCAGGACTTCCTGGACTTCCTGCCAGCAAACATGAACAGGTATAAGAGGTATGTCGAGAGCCTCAGGATCGACAAACCCTGAAGAGGAACAGTGGTAGTGCTGTATCAGAACATATATAGCAAGATGGCATTATTCGGATAAGGTATTTAAACCACCTAAAAACTCCTACTTCGGGAAGTTTGTTCGACTTTATGTTGGATTGTTGGTCAAAGAAAAAGTGATGTCAATCTGTACTGTGCAACACTGTAACACATGTAATCAATATTTAGTTATACATCCTTAAAAAAAAAAAAAAA]

[-] EMBL CA762352             [CCAGTTCGTGGCCTTGACCAACTACCCGCAGTCATTGGCGGAAGAAAGCCGCCAAGATTGGCTTGGCTCCTCACTCTGATTATGGCTTCCTCACCATCCTTGTTGCAGAGCTCCCCAGGGCTTGAGGTGATGCCCCATGAGGATGATGCCTGGACATCTGTCCCTGCTATCCCTGGGGCTCTCCATGTCCATGTAGGAGACCACCTGGAAGTGTTGAGCAATGGCCAGCTCAAGTCCCTTGTCCATCGAGCCGTTCTCAACCCAAACGAGTCAAGGATTTCTATTGCCAGCATCCATGGTCTCTCGATGGATGAAGAGGTCCACTGCGCCGAAGAGCTCGTCGATGAACACCACCCCAAAATGTACAGGGGAAGCAGCTTCCAGGACTTCCTGGACTTCCTGCCAGCAAACATGAACAGGTATAAGAGGTATGTCGAGAGCCTCAGGATCGACAAACCCTGAAGAGGAACAGTGGTAGTGCTGTATCAGAACATATATAGCAAGATGGCATTATTCGGATAAGGTATTTAAACCACCTAAAAACTCCTACTTCGGGAAGTTTGTTCGACTTTATGTTGGATTGTTGGTCAAAGAAAAAGTGATGTCAATCTGTACTGTGCAACACTGTAACACATGTAATCAATATTTAGTTATACATCCTTAAAAAAAAAAAAAAA]




>consensus_10065#2
CCAGTTCGTGGCCTTGACCAACTACCCGCAGTCATTGGCGGAAGAAAGCCGCCAAGATTG
GCTTGGCTCCTCACTCTGATTATGGCTTCCTCACCATCCTTGTTGCAGAGCTCCCCAGGG
CTTGAGGTGATGCCCCATGAGGATGATGCCTGGACATCTGTCCCTGCTATCCCTGGGGCT
CTCCATGTCCATGTAGGAGACCACCTGGAAGTGTTGAGCAATGGCCAGCTCAAGTCCCTT
GTCCATCGAGCCGTTCTCAACCCAAACGAGTCAAGGATTTCTATTGCCAGCATCCATGGT
CTCTCGATGGATGAAGAGGTCCACTGCGCCGAAGAGCTCGTCGATGAACACCACCCCAAA
ATGTACAGGGGAAGCAGCTTCCAGGACTTCCTGGACTTCCTGCCAGCAAACATGAACAGG
TATAAGAGGTATGTCGAGAGCCTCAGGATCGACAAACCCTGAAGAGGAACAGTGGTAGTG
CTGTATCAGAACATATATAGCAAGATGGCATTATTCGGATAAGGTATTTAAACCACCTAA
AAACTCCTACTTCGGGAAGTTTGTTCGACTTTATGTTGGATTGTTGGTCAAAGAAAAAGT
GATGTCAATCTGTACTGTGCAACACTGTAACACATGTAATCAATATTTAGTTATACATCC
TTAAAAAAAAAAAAAAA

consensusID : consensus_10065#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 614
fasta sequence

                              [CAGAATCGCCCTGAAAAGCCCCAATATTGATTTGGCCGATACAAGATGGTCTACGTGCAGGGGATTTACCCGCTGCCCAGTTGGCTCTATGCCATGCCGCTTTCAGTCTCTCTGATGCTGCAGATTCATCATATCTTATAAATACTTGGGCATCTGTGCTGTGCTGGAGGCATCCTGTGTTCTCAGGAGGTAGTAGTGCAGTGCAGTGCAGTGTAGAGACCTGTCCTCTGTGTTGTTTGCTCTCAAGCTCGCCGGAGAAGATAGAAGGGTGGCATGCCCGCCGTGGCCGGGAGCTTGTACATGGCGAGCCAGCACAAGGGAGTGCCTCCGCCGCTGCCGCCGCCGCCGCGGCCATTGCCGGTGATCAACCTGGGCCGGCTCACCATGGACAGTGCCTCGCGGGCGCTCGCCGTGCGGGATATCGTGCTGGCGTGCCGTGAACGTGGCTGCTTTGAGGTTAGTGCTGCTTACTTGTCACCACCCTGCATCCTCCTCTGCTTGTCCTGTCCTCCAACACCTGCAGGTGGTGAACCATGGCATCAGCAGGTCTTGCATGAATGGCGCCCTCGAAGCCGCCTCCGAGTTCTTCCAGCTATCGACGGAGCGCAAGGAGG]

[+] EMBL CF326711             [CAGAATCGCCCTGAAAAGCCCCAATATTGATTTGGCCGATACAAGATGGTCTACGTGCAGGGGATTTACCCGCTGCCCAGTTGGCTCTATGCCATGCCGCTTTCAGTCTCTCTGATGCTGCAGATTCATCATATCTTATAAATACTTGGGCATCTGTGCTGTGCTGGAGGCATCCTGTGTTCTCAGGAGGTAGTAGTGCAGTGCAGTGCAGTGTAGAGACCTGTCCTCTGTGTTGTTTGCTCTCAAGCTCGCCGGAGAAGATAGAAGGGTGGCATGCCCGCCGTGGCCGGGAGCTTGTACATGGCGAGCCAGCACAAGGGAGTGCCTCCGCCGCTGCCGCCGCCGCCGCGGCCATTGCCGGTGATCAACCTGGGCCGGCTCACCATGGACAGTGCCTCGCGGGCGCTCGCCGTGCGGGATATCGTGCTGGCGTGCCGTGAACGTGGCTGCTTTGAGGTTAGTGCTGCTTACTTGTCACCACCCTGCATCCTCCTCTGCTTGTCCTGTCCTCCAACACCTGCAGGTGGTGAACCATGGCATCAGCAGGTCTTGCATGAATGGCGCCCTCGAAGCCGCCTCCGAGTTCTTCCAGCTATCGACGGAGCGCAAGGAGG]




>consensus_10065#3
CAGAATCGCCCTGAAAAGCCCCAATATTGATTTGGCCGATACAAGATGGTCTACGTGCAG
GGGATTTACCCGCTGCCCAGTTGGCTCTATGCCATGCCGCTTTCAGTCTCTCTGATGCTG
CAGATTCATCATATCTTATAAATACTTGGGCATCTGTGCTGTGCTGGAGGCATCCTGTGT
TCTCAGGAGGTAGTAGTGCAGTGCAGTGCAGTGTAGAGACCTGTCCTCTGTGTTGTTTGC
TCTCAAGCTCGCCGGAGAAGATAGAAGGGTGGCATGCCCGCCGTGGCCGGGAGCTTGTAC
ATGGCGAGCCAGCACAAGGGAGTGCCTCCGCCGCTGCCGCCGCCGCCGCGGCCATTGCCG
GTGATCAACCTGGGCCGGCTCACCATGGACAGTGCCTCGCGGGCGCTCGCCGTGCGGGAT
ATCGTGCTGGCGTGCCGTGAACGTGGCTGCTTTGAGGTTAGTGCTGCTTACTTGTCACCA
CCCTGCATCCTCCTCTGCTTGTCCTGTCCTCCAACACCTGCAGGTGGTGAACCATGGCAT
CAGCAGGTCTTGCATGAATGGCGCCCTCGAAGCCGCCTCCGAGTTCTTCCAGCTATCGAC
GGAGCGCAAGGAGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10065#1      ------------------------------------------------------------
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      TTTAGAATGGTCGGTTGAACACCCAAACTTTCTACGTCAAATGTAAGATTTACCAGTTTT 60
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      ------------------------------------------------------------
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      TTTTTCATAAGGCATACAAACTTTTTTTTTCATACGATCACCCCACGTATTGGACTTAAT 120
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      ------------------------------------------------------------
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      ATCTTGTCTAGTTTAGTCCAGGGTGTAGTCACCATTTTGCTCGCACGAATTTTCTGTGGC 180
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      ------------------------------------------------------------
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      TCTTGTCTAATGTTAGACGTGGCAAGATTAGCCATCAACCAAACACCTCGTCAATAGCAG 240
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      ------------------------------------------------------------
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      AGAGGGTGTGATGTCACCGTGTTAAATTTTGACAATAAACCAAACAATAGCCAAAAAGGT 300
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      ------------------------------------------------------------
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      GATCAAATTTGGTTAAAAAGTGTGATAAACTACGCCAATGGGACCAAAAGGACCTCAGAA 360
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      ------------------------------------------------------------
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      GTATCTTCCGCTGAAAAAGTATCAAAAAAATTCACAAAAAGGGAATTACCAGCGAAAAGA 420
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      ------------------------------------------------------------
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      AAACTAAGAAAAGTTTAAAGCACCGTATCCTGTTTTATTTTCTCTTTCTTGGAGCACTTT 480
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      ------------------------------------------------------------
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      TGTTTTTATCTAATAACGATGATTACCTGCTCGTTGAGAAAAGTTCTCTATTTGTTCTTT 540
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      ------------------------------------------------------------
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      GCCACTCGCTACAACATGGGAAGTGTGCTACTATTCCAACACTTGGAGTACTATTTTTAC 600
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      ------------------------------------------------------------
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      GCAATAACGATGATTACCTGCTCGTTAAGAAAAGCTTTCTACTTGTTCTTTGCCACTCGC 660
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      ------------------------------------------------------------
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      TACAACATGGGAAGTGCTAGCACTACTATTCTAACGTGGAAAAGCAAGGCTGTTGCTTTC 720
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      ------------------------------------------------------------
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      CCCCCCTTGAAACTGAAAAAAAAGGAGCCATCTTGTCATGTCCCAGAATCCAAAACCGGA 780
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      ------------------------------------------------------------
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      AACCCCCCCTCTGCATCGGCAGGTCTCCTCCCCCCAACTTTGCCGCGGGATTCGTCGTCT 840
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      ------------------------------------------------------------
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      CCATCACCACCGTGAGCAAAAGACCCACCACCACAAGTCACCCCCAACTCCGCCTGAAAA 900
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      ----------------------------------------CGGGATGCACCCAGCGGCAA 20
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      ACAAGCATTATCCAGGGATAGACAGAGAGAGAAAGCAAAGCGGGATGCACCCAGCGGCAA 960
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      CTCGCAGGCTGAGGGAGGAATAACAAAATGTTCGGCAGGCAGCAGGGTCACTCATCACAG 80
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      CTCGCAGGCTGAGGGAGGAATAACAAAATGTTCGGCAGGCAGCAGGGTCACTCATCACAG 1020
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      TCACAGATCGACGGCGACACAGCTGGTGGCCACTATCTTGGATCGAAATGGCCTGCACCT 140
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      TCACAGATCGACGGCGACACAGCTGGTGGCCACTATCTTGGATCGAAATGGCCTGCACCT 1080
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      GTAGCTGCTCATCTGGACTTACTAAGCATGCACTACTACGAAGTAAGTAGTGGTAGTAGT 200
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      GTAGCTGCTCATCTGGACTTACTAAGCATGCACTACTACGAAGTAAGTAGTGGTAGTAGT 1140
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      AGTTGTGTTGTGTGTGCATACGCAAACGCAACGCAAGATGAGGAGGTGAGCCAATTGCCT 260
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      AGTTGTGTTGTGTGTGCATACGCAAACGCAACGCAAGATGAGGAGGTGAGCCAATTGCCT 1200
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      GCTCCTGGACAGA--ATCGCCCTGAAAAGCC-CCAATATTGATTTGGCCGATACAAGATG 317
consensus_10065#3      ---------CAGA--ATCGCCCTGAAAAGCC-CCAATATTGATTTGGCCGATACAAGATG 48
consensus_10065#0      GCTCCTGGACAGA--ATCGCCCTGAAAAGCC-CCAATATTGATTTGGCCGACACAAGATG 1257
consensus_10065#2      --------CCAGTTCGTGGCCTTGACCAACTACCCGCAGTCATT-GGCGGAAGAAAGCCG 51
                                ***    * *** ***  * *  **   * * *** *** **   ***  *

consensus_10065#1      GTCTACGTGCAGGGGATTTACCCGCTGCCCAGTTGGCTCTATGCCATGCCGCTTTCAGT- 376
consensus_10065#3      GTCTACGTGCAGGGGATTTACCCGCTGCCCAGTTGGCTCTATGCCATGCCGCTTTCAGT- 107
consensus_10065#0      GTCTACGTGCAGGGGATTTACCCGCTGCCCAGTTGGCTCTATGCCATGCCGCTTTCAGT- 1316
consensus_10065#2      CCAAGATTGGCTTGGCTCCTCACTCTGATTA-TGGCTTCCTCACCATCCTTGTTGCAGAG 110
                              **    ** *   * * ***   * * *  **    **** *   ** ***  

consensus_10065#1      CTCTCTGATGCTGCAGATT-CATCAGAGCTTATAAATACTTGGGCATCTGT----GCTGT 431
consensus_10065#3      CTCTCTGATGCTGCAGATT-CATCATATCTTATAAATACTTGGGCATCTGT----GCTGT 162
consensus_10065#0      CTCTCTGATGCTGCAGATT-CATCAGAGCTTATAAATACTTGGGCATCTGT----GCTGT 1371
consensus_10065#2      CTCCCCAGGGCTTGAGGTGATGCCCCATGAGGATGATGCCTGGACATCTGTCCCTGCTAT 170
                       *** *    ***  ** *     *  *        ** * *** *******    *** *

consensus_10065#1      GCTGGAGGCATCCTGTGTTCTC--AGGAGGTAGTAGTGCAGTGCAGTGCAGTGTAGAGAC 489
consensus_10065#3      GCTGGAGGCATCCTGTGTTCTC--AGGAGGTAGTAGTGCAGTGCAGTGCAGTGTAGAGAC 220
consensus_10065#0      GCTGGAGGCATCCTGTGTTCTC--AGGAGGTAGTAGTGCAGTGCAGTGCAGTGTAGAGAC 1429
consensus_10065#2      CCCTGGGGCTCTCCATGTCCATGTAGGAGACCACCTGGAAGTGTTGAGCAATGGCCAGCT 230
                        *  * ***   *  *** *    *****        * ****  * *** **   **  

consensus_10065#1      CTGTCCTCTGTGTTGTTTGCTCTCAAGCTCGCCGGAGAAGATAGAAGGGTGGCATGCCCG 549
consensus_10065#3      CTGTCCTCTGTGTTGTTTGCTCTCAAGCTCGCCGGAGAAGATAGAAGGGTGGCATGCCCG 280
consensus_10065#0      CTGTCCTTTGTGTTGTTTGCTCTCAAGCTCGCCGGAGAAGATAGAAGGGTGGCATGCCCG 1489
consensus_10065#2      CAAGTCCCT-TGTCCATCGAGCCGTTCTCAACCCAAACGAGTCAAGGATTTCTATTGCCA 289
                       *    *  * ***   * *  *         **  *     *  * *  *   **  ** 

consensus_10065#1      CCGTGGCCGGGAGCTTG-TACATGGCGAG--CCAGCACAAGGGAGTGCCTCCGCCGCTGC 606
consensus_10065#3      CCGTGGCCGGGAGCTTG-TACATGGCGAG--CCAGCACAAGGGAGTGCCTCCGCCGCTGC 337
consensus_10065#0      CCGTGGCCGGGAGCTTG-TACATGGCGAG--CCAGCACAAGGGAGTGCCTCCGCCGCTGC 1546
consensus_10065#2      GCATCCATGGTCTCTCGATGGATGAAGAGGTCCACTGCGCCGAAGAGC--TCGTCGATG- 346
                        * *    **   ** * *  ***  ***  ***   *   * ** **   ** ** ** 

consensus_10065#1      CGCCGCCGCCGCGGCCATTGCCGGTGATCAACCTGGGCCGGCTCACCATGGACAGTGCCT 666
consensus_10065#3      CGCCGCCGCCGCGGCCATTGCCGGTGATCAACCTGGGCCGGCTCACCATGGACAGTGCCT 397
consensus_10065#0      CGCCGCCGCCGCGGCCATTGCCGGTGATCAACCTGGGCCGGCTCACCATGGACAGTGCCT 1606
consensus_10065#2      -AACACCACCCCAAAATGTACAGGGGAAGCAGCT--TCCAGGACTTCCTGGACTTCCTGC 403
                          * ** ** *      * * ** **   * **   ** *  *  * *****       

consensus_10065#1      C-GCGGGCGCTCGCCG-TGCGGGATATCGTGCTGGCGTGCCGTGAACGTGGCTGCTTTGA 724
consensus_10065#3      C-GCGGGCGCTCGCCG-TGCGGGATATCGTGCTGGCGTGCCGTGAACGTGGCTGCTTTGA 455
consensus_10065#0      C-GCGGGCGCTCGCCG-TGCGGGATATCGTGCTGGCGTGCCGTGAACGTGGCTGCTTTGA 1664
consensus_10065#2      CAGCAAACATGAACAGGTATAAGAGGTATGTCGAGAGCCTCAGGATCGACAAACCCTGAA 463
                       * **   *     * * *    **  *    *  * *   *  ** **      * *  *

consensus_10065#1      GGTTAGTGCTGCTTACTTGTCACCA--CCCTGCATCCT-------CCTC-TGCTTGTCCT 774
consensus_10065#3      GGTTAGTGCTGCTTACTTGTCACCA--CCCTGCATCCT-------CCTC-TGCTTGTCCT 505
consensus_10065#0      GGT-GGTGAACCATGGC-ATCAGCAGGTCTTGCATGAA-------TGGCGCCCTCGAAGC 1715
consensus_10065#2      GAGGAACAGTGGTAGTGCTGTATCAGAACATATATAGCAAGATGGCATTATTCGGATAAG 523
                       *                    * **   * *  **                 *       

consensus_10065#1      GTCCTCCAAC-ACCTGTCAGTTGTTATTACA-CATG-CATGTGATACCAGACACAAGAA- 830
consensus_10065#3      GTCCTCCAAC-ACCTGCAGGTGGTGAAC----CATG-GCATCAGCAGGTCTTGCATGAA- 558
consensus_10065#0      CGCCTCCGAG-TTCTTCCAGCTATCGACGGAGCGCAAGGAGGAGTTCGCGTCGGACGACA 1774
consensus_10065#2      GTATTTAAACCACCTAAAAACTCCTACTTCGGGAAGTTTGTTCG-ACTTTATGTTGGATT 582
                           *   *    **                                         **  

consensus_10065#1      --TGTTTTGCTTACACGTACTCT-CTCTTTCTCATAAAAAACGAATCTAGTACCGGATGT 887
consensus_10065#3      --TGGCGCCCTCGAAGCCGCCTC-CGAGTTCTTCCAGCTATCGA-CGGAGCGCAAGGAGG 614
consensus_10065#0      TCCGGCAGCCCATCAGGTACGACACGAGCTCGAGGGACGGGATCAGCATGTCCAGGTCAT 1834
consensus_10065#2      GTTGGTCAAAGAAAAAGTGATGT-CAATCTGTACTGTGCAAC-ACTGTAACACATGTAAT 640
                          *          *         *    *                      *  *    

consensus_10065#1      GACATGAATGTTTTGCTTACACGTAGTACGTGAAAAGGAAGCTGCTGCCAACTCATGAAA 947
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      TTCTGAAGCACTATGCCAATCCCCTGGACGACTGGATCAAGTTCTGGCCGACGCAGCCAC 1894
consensus_10065#2      CAATATTTAGTTATACATCCTTAAAAAAAAAAAAAAA----------------------- 677
                                                                                   

consensus_10065#1      ATGAGTAACAAAACTGCATCTGCATGCGAAACTGACGAACGCCAGATATACCAGAGACAG 1007
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      CAACTTACAGGGAGAAAATGGGTGAGTACGCCGTGGAGACGCAGCGAGTGTCAATGCAGC 1954
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      CTGATAGACCATTGTGCTCGACTTACCTGCAGGTGGTGAACCATGGCATCAGCAGGTCTT 1067
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      TCATGGAAGCAATCCTGCAGGGCCTGGGATTAGGGCCATCGTACCTGCAAGAAAAGCTTG 2014
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      GCATGAATGGCGCCCTCGAAGCCGCCTCCGAGTTCTTCCAGCTATCGACGGAGCGCAAGG 1127
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      AAGGAGGGGTGCAGTTCGTGGCCTTGAACAACTACCCGCAGTCATCGGCGAAGAAAGCCG 2074
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      AGGAGTTCGCGTCGGACGACATCCGGCAGCCCATCAGGTACGACACGAGCTCGAGGGACG 1187
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      ACAAGATCGGCTTGGCTCCTCACTCTGATTATGGCTTCCTCACCATCCTGTTGCAGAGCT 2134
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      GGATCAGCATGTCCAGGTCATTTCTGAAGCACTATGCCAATCCCCTGGACGACTGGATCA 1247
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      CCCCAGGGCTTGAGGTGATGCACCATGAGGATGATGCCTGGACATCTGTCCCTGCTATC- 2193
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      AGTTCTGGCCGACGCAGCCACCAACTTACAGGTAACCTGCAAGAAAAGCTTGAAGGAGGG 1307
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      ---CCTGGGGCTCTCCATGTCCATGTAGGAGACCACCTGGAAGTGTTGAGCAATGGCCAG 2250
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      GTGCAGTTCGTGGCCTTGAACAACTACCCGCAGTCATCGGCGAAGAAAGCCGACAAGATC 1367
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      CTCAAGTCCCTTGTCCATCGAGCCGTTCTCAACCCAAACGAGTCAAGGATTTCTATTGCC 2310
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      GGCTTGGCTCCTCACTCTGATTATGGCTTCCTCACCATCCTGTTGCAGAGCTCCCCAGGG 1427
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      AGCATCCATGGTCTCTCGATGGATGAAGAGGTCCACTGCGCCGAAGAGCTCGTCGATGAA 2370
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      CTTGAGGTGATGCACCATGAGGATGATGCCTGGACATCTGTCCCTGCTATCCCTGGGGCT 1487
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      CACCACCCCAAAATGTACAGGGGAAGCAGCTTC-CAGGACTTCCTGGACTTCCTGCCAGC 2429
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      CTCCATGTCCATGTAGGAGACCACCTGGAAGTGTTGAGCAATGGCCAGCTCAAGTCCCTT 1547
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      AGACATGAACAGGTATAGGAGGTATGTCGAGAGCCTCAGGATCGACAAACCCTGAAGAGG 2489
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      GTCCATCGAGCCGTTCTCAACCCAAACGAGTCAAGGATTTCTATTGCCAGCATCCATGGT 1607
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      AACAGT--GGTAGTGCTGTATCAGAACATATATAGCAAGATGGCATTATTCGGATAAAGT 2547
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      CTCTCGATGGATGAAGAGGTCCACTGCGCCGAAGAGCTCGTCGATGAACACCACCCCAAA 1667
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      ATTTAAACCACCTAAAAACTCCTACTTCGGGAAGTTTGTTCGACTTTATGTTGGATTGTT 2607
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      ATGTACAGGGGAAGCAGCTTCCAGGACTTCCTGGACTTCCTTTCACTCAGACGAGGCCTC 1727
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      GGTCAAAGAAAAAGTGATGTCAATCTGTACTGTGCAACACTGTAACACATGTAATCAATA 2667
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      TCCTCTGGCTGCCACTCTGCTGCTTCGAGCTGCTGGTGCGGCTTCGTTTTCTCTCGTCTC 1787
consensus_10065#3      ------------------------------------------------------------
consensus_10065#0      TTTAGTTA-TACATCCTTAGTAACTATAGCTACAAGAGT--------------------- 2705
consensus_10065#2      ------------------------------------------------------------
                                                                                   

consensus_10065#1      CTCTCCAATCCTGGCGCTCC 1807
consensus_10065#3      --------------------
consensus_10065#0      --------------------
consensus_10065#2      --------------------