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Oryza sativa
cluster # 101 cluster # 101       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_101#0 length = 992 sequences # 2  

consensusID : consensus_101#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 992
fasta sequence
                              [CGTGCAATACATACGTGGTAGTAGTAGTAACAATGGGCAGCGAGCTGCCGGCCGCGGCGCCGCCGCAGCCGAAGCGATCCACCGCGGCGGCGGCGGTCGCGCGCAGACGGATAGGGCGCGAGCTGTGGCAGTTCTGGCTCGATCCGCCGCCGTACTGCCGGCCCGGGCCATCCCCCGTGAAGGACCACTTCCACTGGGAGGTGGTCATCGATGGCCCCGCCGCCACCCCCTACGCCGGCGGCGTGTTCCCCGTCGACGTCTGGTTCCCCTACGATTACCCCTTCCGTCCCCCCAAGCTCTTCTTCAAGACCAAGGTGTACCATCCGAACATTGACGGG--AAGGGGAGGATGGCGCTGGACATCTTCCAGGACAACTGGTCACCGGCCTTGACGATCAACAAACTCCTCTTGTGCTTCGTCTCCGTCCTCTTCGACCCCCTGCTCGACCGCCCGACCAACCGCTGCATCGCCAAGCAGTACAAGCACGAGTACGAGGCGTACGAGGAGAAGGCCAGGGCTTGGACGCAGAAGCACTCCTCGACGCCGATCGTCTCGCACTACCCACCGTACGCTGTCATCGGCAGCACGCCGCCGGCTGTTCCTTACTTCCCAGCGACTGCAGCCAGGAGAAAGGCTGCTGCATCTTCAGCTTCAGGTTCAGTAAGCAGCAGCCGCATTCCGTTGCTTATGAAGGATGAGAGTATCTGGAGAAGGACAATGAAG-TTTTTTCAGGGTTAGTCTTCTTAATTATCGTCTACGTACTGCACAGACACTGAAAACAGATAAGGGAAATTAGAGTTCTTTCTTCCTCACAGATGAAATATGTTATATCTAGAATTTTATTTTACTGTATTGTGAATTGTTGAGAGGTATGCATACTTGTATCAAATCTTCAGGTTATGATCTGTCACCACACGGTAATGACATGGAGCTGCTGACTATGAGGAGTGATAAACAAAGTCCTTATTTATCTTTTTAGTCAAAAAAAAAAAA]

[+] EMBL AK108167             [CGTGCAATACATACGTGGTAGTAGTAGTAACAATGGGCAGCGAGCTGCCGGCCGCGGCGCCGCCGCAGCCGAAGCGATCCACCGCGGCGGCGGCGGTCGCGCGCAGACGGATAGGGCGCGAGCTGTGGCAGTTCTGGCTCGATCCGCCGCCGTACTGCCGGCCCGGGCCATCCCCCGTGAAGGACCACTTCCACTGGGAGGTGGTCATCGATGGCCCCGCCGCCACCCCCTACGCCGGCGGCGTGTTCCCCGTCGACGTCTGGTTCCCCTACGATTACCCCTTCCGTCCCCCCAAGCTCTTCTTCAAGACCAAGGTGTACCATCCGAACATTGACGGG  AAGGGGAGGATGGCGCTGGACATCTTCCAGGACAACTGGTCACCGGCCTTGACGATCAACAAACTCCTCTTGTGCTTCGTCTCCGTCCTCTTCGACCCCCTGCTCGACCGCCCGACCAACCGCTGCATCGCCAAGCAGTACAAGCACGAGTACGAGGCGTACGAGGAGAAGGCCAGGGCTTGGACGCAGAAGCACTCCTCGACGCCGATCGTCTCGCACTACCCACCGTACGCTGTCATCGGCAGCACGCCGCCGGCTGTTCCTTACTTCCCAGCGACTGCAGCCAGGAGAAAGGCTGCTGCATCTTCAGCTTCAGGTTCAGTAAGCAGCAGCCGCATTCCGTTGCTTATGAAGGATGAGAGTATCTGGAGAAGGACAATGAAG TTTTTTCAGGGTTAGTCTTCTTAATTATCGTCTACGTACTGCACAGACACTGAAAACAGATAAGGGAAATTAGAGTTCTTTCTTCCTCACAGATGAAATATGTTATATCTAGAATTTTATTTTACTGTATTGTGAATTGTTGAGAGGTATGCATACTTGTATCAAATCTTCAGGTTATGATCTGTCACCACACGGTAATGACATGGAGCTGCTGACTATGAGG                                               ]
[-] EMBL CA761141             [                                                                                                                                                                                                                                                                                                                                           gGACGAGACAAGGGGAGGATGGCGCTGGACATCTTCCAGGACAACTGGTCACCGGCCTTGACGATCAACAAACTCCTCTTGTG TTCGTCTCCGTCCTCTTCGACCCCCTGCTCGACCGCCCGACCAACCGCCGCATCGCCAAGCAGTACAAGCACGAGTACGAGGCGTACGAGGAGAAGGCCAAGGCTTGGACGCAGAAGCACTCCTCGACGCCGATCGTTTCGCACTACCCGCCGTACGCTGTCATCGGCAGCACGCCGCCGGCTGTTCCTCACTTCCCAGCGACTGCAGCCAGGAGAAAGGCTGCTGCATCTTCAGCTTCAGGTTCAGTAAGCAGCAGCCGCATTCCGTTGCTTATGAAGGATGAGAGTATCTGGAGAAAGACAATGAAGTTTTTTTCAGGGTTAGTCTTCTTAATTATCGTCTACGTACTGCACAGACACTGAAAACAGATCAGGGAAATTAGAGTTCTTTCTTCCTCACAGATGAAATATGTTATATCTAGAATTTTATTTTACTGTATTGTGAATTGTTGAGAGGTATGCATACTTGTATCAAATCTTCAGGTTATGATCTGTCACCACACGGTAGTGACATGGAGCTGCTGACTATGAGGAGTGATAAACAAAGTCCTTATTTATCTTTTTAGTCAAAAAAAAAAAA]


>consensus_101#0 CGTGCAATACATACGTGGTAGTAGTAGTAACAATGGGCAGCGAGCTGCCGGCCGCGGCGC CGCCGCAGCCGAAGCGATCCACCGCGGCGGCGGCGGTCGCGCGCAGACGGATAGGGCGCG AGCTGTGGCAGTTCTGGCTCGATCCGCCGCCGTACTGCCGGCCCGGGCCATCCCCCGTGA AGGACCACTTCCACTGGGAGGTGGTCATCGATGGCCCCGCCGCCACCCCCTACGCCGGCG GCGTGTTCCCCGTCGACGTCTGGTTCCCCTACGATTACCCCTTCCGTCCCCCCAAGCTCT TCTTCAAGACCAAGGTGTACCATCCGAACATTGACGGGAAGGGGAGGATGGCGCTGGACA TCTTCCAGGACAACTGGTCACCGGCCTTGACGATCAACAAACTCCTCTTGTGCTTCGTCT CCGTCCTCTTCGACCCCCTGCTCGACCGCCCGACCAACCGCTGCATCGCCAAGCAGTACA AGCACGAGTACGAGGCGTACGAGGAGAAGGCCAGGGCTTGGACGCAGAAGCACTCCTCGA CGCCGATCGTCTCGCACTACCCACCGTACGCTGTCATCGGCAGCACGCCGCCGGCTGTTC CTTACTTCCCAGCGACTGCAGCCAGGAGAAAGGCTGCTGCATCTTCAGCTTCAGGTTCAG TAAGCAGCAGCCGCATTCCGTTGCTTATGAAGGATGAGAGTATCTGGAGAAGGACAATGA AGTTTTTTCAGGGTTAGTCTTCTTAATTATCGTCTACGTACTGCACAGACACTGAAAACA GATAAGGGAAATTAGAGTTCTTTCTTCCTCACAGATGAAATATGTTATATCTAGAATTTT ATTTTACTGTATTGTGAATTGTTGAGAGGTATGCATACTTGTATCAAATCTTCAGGTTAT GATCTGTCACCACACGGTAATGACATGGAGCTGCTGACTATGAGGAGTGATAAACAAAGT CCTTATTTATCTTTTTAGTCAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)