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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10116#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 3181 fasta sequence
[CTCCTCTATTCTCTCTCCTGTGTTTCCGGCGGAGGCACGAGCGCACGGACAGCCTCCTCCCCCCGCCTCCACCTCCGCGCGGTCGCCGCCGGCGAGGAGGCGGCGCCGGACGAGCTCCTCTCCTTCCCCGCCACGCCGTAGCATCCTCCTCCTCCCCCGCGCGCGCGCCGCTGGGCGAGCAAGTCTGGGGGCCAGGAGCGAGCAGCGCGGCGCGGCGCGGCCCGGCCAGGCCTCTCATTCCACCACCACTGGCGCCCATCTCGGCGGCTCGGATCGAATTCAGAGTTTCGTCGCTTGCTCTCCGACGGCGGCGATGATGGAGGCGGAGGAGGCGTTCCCTCCGCAGAGGAATCCCCGCCGCGCGCGGCGCCGCGACCTCAACGCACTGGATCCCAGTTTAGAAGAGTCTGATGGAGAGGATATTGGTGTTCCAGAAGTTGGCATGGTGTTCAATAACCACACGGAGGTCAACCGATTCTACCGAAGGTATGCTCGCCGTGTTGGCTTTGGGGTGTCTGTTAGGAGGTCCTCATTTTCACAAGAGGGCACCTGCTTATATCTGGAGCTCATGTGCTGCAAAGGAGGGCGGCCACGTTATGAGCCAAAGTTCAGGAAACGGGCCTCTTCAACCACTAACTGTCCAGCCAAGATCAGAGTAAAGCTATGGGGAGATAAATTGTTGCATGTAGAGTTGGCAATCCTTGATCATAATCATCCTGTTAGCCCAGCAATGGCAAGGTTTTTGAACTCCTATAAGCAGCTATCTGGCCCTGCAAAGAGGCGATTACGTATGGGTGGCCCTGGAGCTATGCCAGTGGAAGAACCAAGCAAGATGCCTGTTGATAAGTTGGGTGCACTTGAGGAGCTTTTGTTTGGAGAGAGCAAGCACCATAGTTTTGTTGAGAGGGGCCGCTTGAAGTTCCAACCTGGAGATTCAGAAGCCCTTCGGCTTTTCTTTACTCGTATGCAAGCCAAAAATGCAAACTTCTTTAATGTCATTGACTTGGATGATGAAGGCTGTGTCAGAAATGTCTTCTGGGTAGATGCACGGTCAAGATCCATGTATGAGTTCTATAACGATGTTGTCACACTTGACACATCGTATGTGGTCGGTAAATATGATATGCCTCTTGCAACTTTTATTGGGGTGAATCATCATGGCCAATCTGTTTTATTGGGTTGTGGCCTGCTTTCAGATGAAACAGCAGAAACCTATTCATGGATATTTAAGGCTTGGGTAGCATGCATGTATGGTAATCTTCCAAAGGCTATCATCACTGGCCACTGCAGGGGCATCCAGAGTGCGGTTGCTGAGGTTATTCCTGGAGTCCATCATAGAATATGCCTATTTCATATAATGAGGAAGGCGACAGAGCGATTAGGTGGTCTGTCGGAGTACGCAGCTATCAGCAAGGCTTTCCAAAAAGCTGTATATGATTCTTTAACCATAGATGAGTTTGAAGGAAATTGGAATGCTCTGATTACATACAATGGGCTTCAGGGTAATGACTGGCTAAGATCAATTTATGAGTGCCGATACTCATGGGTTCCTGTTTTTCTTAAAGATACATTTTGGGCAGGAATGTCTGCTACACAAAGAAATGAAAATATCATTCCTTTCTTTGATGGATATGTAGATTTGAAAACCACATTGAAGCACTTTCTTGGGAAGTATGAGATGGCCTTGCAGAGCAAATATGAAAAGGAGGCCCAAGCAGATTTTGAGACATTCCATAAGCAGCGCCCACCTGTGTCAAAATTCTATATGGAAGAGCAACTGTCCAAGGTATACACCCATAACATCTTCAAGAAATTCCAAGATGAAATTGAAGCAATAATGTACTGCCATGTATCTTTCATTAATGTTGATGGCCTCATATCCACATTCGATGTCAAGGAATGGATTTTCCTTGAAGATGGTAAAAGGACTATGAGCAAGATCTTTACAGTGACAAATAACACAGATAAAAATGATTTAACTTGTATCTGTGGAGGTTTCCAGTTTAATGGAATATTGTGTAGGCATAGTCTCTCAGTCCTCAAGTTTCAACAGGTTCGTGAAATTCCTCCACACTATGTTCTTGATAGGTGGAAAAAGGATTTCAGACAGTTGCATGTGATGGGGCGTCCTTCAAGTGATGTTGTTCCAAACAATCGTGTGGATCGATATGATTATTTGTCAATGAGATGTCTGCAGCTAGTTGATTCAGCAGTCCTATCAGATAAATATCGTCTTGCTTTGAGATTGGTGAGGGAGATGGAGAAGTTTATGTTAAACAGCAACACGCATGATGATACACAACCAAGGATCAAGTCTCGCATTCCTAAAGCAAATAAACCAAATACAGTGGTTGGTCAAAATCTGGTAAACGTTGGCACTTACAATGGAAATGATAGGCCCAAAGCAACAACAGAGGCTTCTTCATTAACACAGGGATTGGATGTCCAGAAGGGAGGAGCAGAAAAGGGCATAGTTCCTGCTGGTTACATTGGACTGCCAGCTAATGTTCAGCAATTCGTAGGCAGTCAAACAGCGATTCGCCCAAGCATTGTGTATATGGTTCCGAGTGGTGNTGACCCACAGGCATTTGGAAATGGTGTTCTGATGCCT-GTTGTGTACCA-GC-AGATGTTCCAGGTACCCCA-GCAGCCAAATGGAACCATGCCAGATACTTCA-GCA-AATGGAAAAAGGAAGCGGCCTCGTGCCCAGAAGCC-ACAGAGGCATCTGAACAGTCAAATGGAACCCCGGCAACAGGACCCACATCTGGGTAGATTGAA-CAGT-TTCTCAT-TTAGTCAGAACTCAGAACAGGTCTTTGTAAATATGCAGAGGAAGTGAAGAGTTGCCTAGAGAACTTCAAACGGATGCTAGCACTAAC-AAAGTACATCAAATCCATCTTGGCTGTGATCTGAAGCCTTTGTGCTGCAGAGATTGAGCACGGCCAAGCCCAAGCGCCATTCTTCATTTGGATCATCCTGGAGTGAAGTCCAGGGTTGAAAAATAGCCTTCACCTCATTTGACTTTAGTTGATTCCAGCAACATTAGCCGATAATGTTTTTGTGGCTCTGCCATGATATACAAGTTCTGAAATCTCGCTGTCGTTTCCA-TGGT-AATATGTAAATGATTTTTTGATGGACTAAAAAAGTCATTTGACTGGATTTTTTTAGTTCGGAGGCTTAAAGACTC]
[+] EMBL AK073527 [CTCCTCTATTCTCTCTCCTGTGTTTCCGGCGGAGGCACGAGCGCACGGACAGCCTCCTCCCCCCGCCTCCACCTCCGCGCGGTCGCCGCCGGCGAGGAGGCGGCGCCGGACGAGCTCCTCTCCTTCCCCGCCACGCCGTAGCATCCTCCTCCTCCCCCGCGCGCGCGCCGCTGGGCGAGCAAGTCTGGGGGCCAGGAGCGAGCAGCGCGGCGCGGCGCGGCCCGGCCAGGCCTCTCATTCCACCACCACTGGCGCCCATCTCGGCGGCTCGGATCGAATTCAGAGTTTCGTCGCTTGCTCTCCGACGGCGGCGATGATGGAGGCGGAGGAGGCGTTCCCTCCGCAGAGGAATCCCCGCCGCGCGCGGCGCCGCGACCTCAACGCACTGGATCCCAGTTTAGAAGAGTCTGATGGAGAGGATATTGGTGTTCCAGAAGTTGGCATGGTGTTCAATAACCACACGGAGGTCAACCGATTCTACCGAAGGTATGCTCGCCGTGTTGGCTTTGGGGTGTCTGTTAGGAGGTCCTCATTTTCACAAGAGGGCACCTGCTTATATCTGGAGCTCATGTGCTGCAAAGGAGGGCGGCCACGTTATGAGCCAAAGTTCAGGAAACGGGCCTCTTCAACCACTAACTGTCCAGCCAAGATCAGAGTAAAGCTATGGGGAGATAAATTGTTGCATGTAGAGTTGGCAATCCTTGATCATAATCATCCTGTTAGCCCAGCAATGGCAAGGTTTTTGAACTCCTATAAGCAGCTATCTGGCCCTGCAAAGAGGCGATTACGTATGGGTGGCCCTGGAGCTATGCCAGTGGAAGAACCAAGCAAGATGCCTGTTGATAAGTTGGGTGCACTTGAGGAGCTTTTGTTTGGAGAGAGCAAGCACCATAGTTTTGTTGAGAGGGGCCGCTTGAAGTTCCAACCTGGAGATTCAGAAGCCCTTCGGCTTTTCTTTACTCGTATGCAAGCCAAAAATGCAAACTTCTTTAATGTCATTGACTTGGATGATGAAGGCTGTGTCAGAAATGTCTTCTGGGTAGATGCACGGTCAAGATCCATGTATGAGTTCTATAACGATGTTGTCACACTTGACACATCGTATGTGGTCGGTAAATATGATATGCCTCTTGCAACTTTTATTGGGGTGAATCATCATGGCCAATCTGTTTTATTGGGTTGTGGCCTGCTTTCAGATGAAACAGCAGAAACCTATTCATGGATATTTAAGGCTTGGGTAGCATGCATGTATGGTAATCTTCCAAAGGCTATCATCACTGGCCACTGCAGGGGCATCCAGAGTGCGGTTGCTGAGGTTATTCCTGGAGTCCATCATAGAATATGCCTATTTCATATAATGAGGAAGGCGACAGAGCGATTAGGTGGTCTGTCGGAGTACGCAGCTATCAGCAAGGCTTTCCAAAAAGCTGTATATGATTCTTTAACCATAGATGAGTTTGAAGGAAATTGGAATGCTCTGATTACATACAATGGGCTTCAGGGTAATGACTGGCTAAGATCAATTTATGAGTGCCGATACTCATGGGTTCCTGTTTTTCTTAAAGATACATTTTGGGCAGGAATGTCTGCTACACAAAGAAATGAAAATATCATTCCTTTCTTTGATGGATATGTAGATTTGAAAACCACATTGAAGCACTTTCTTGGGAAGTATGAGATGGCCTTGCAGAGCAAATATGAAAAGGAGGCCCAAGCAGATTTTGAGACATTCCATAAGCAGCGCCCACCTGTGTCAAAATTCTATATGGAAGAGCAACTGTCCAAGGTATACACCCATAACATCTTCAAGAAATTCCAAGATGAAATTGAAGCAATAATGTACTGCCATGTATCTTTCATTAATGTTGATGGCCTCATATCCACATTCGATGTCAAGGAATGGATTTTCCTTGAAGATGGTAAAAGGACTATGAGCAAGATCTTTACAGTGACAAATAACACAGATAAAAATGATTTAACTTGTATCTGTGGAGGTTTCCAGTTTAATGGAATATTGTGTAGGCATAGTCTCTCAGTCCTCAAGTTTCAACAGGTTCGTGAAATTCCTCCACACTATGTTCTTGATAGGTGGAAAAAGGATTTCAGACAGTTGCATGTGATGGGGCGTCCTTCAAGTGATGTTGTTCCAAACAATCGTGTGGATCGATATGATTATTTGTCAATGAGATGTCTGCAGCTAGTTGATTCAGCAGTCCTATCAGATAAATATCGTCTTGCTTTGAGATTGGTGAGGGAGATGGAGAAGTTTATGTTAAACAGCAACACGCATGATGATACACAACCAAGGATCAAGTCTCGCATTCCTAAAGCAAATAAACCAAATACAGTGGTTGGTCAAAATCTGGTAAACGTTGGCACTTACAATGGAAATGATAGGCCCAAAGCAACAACAGAGGCTTCTTCATTAACACAGGGATTGGATGTCCAGAAGGGAGGAGCAGAAAAGGGCATAGTTCCTGCTGGTTACATTGGACTGCCAGCTAATGTTCAGCAATTCGTAGGCAGTCAAACAGCGATTCGCCCAAGCATTGTGTATATGGTTCCGAGTGGTGTTGACCCACAGGCATTTGGAAATGGTGTTCTGATGCCT GTTGTGTACCA GC AGATGTTCCAGGTACCCCA GCAGCCAAATGGAACCATGCCAGATACTTCA GCA AATGGAAAAAGGAAGCGGCCTCGTGCCCAGAAGCCAACAGAGGCATCTGAACAGTCAAATGGAACCCCGGCAACAGGACCCACATCTGGGTAGATTGAA CAGT TTCTCAT TTAGTCAGAACTCAGAACAGGTCTTTGTAAATATGCAGAGGAAGTGAAGAGTTGCCTAGAGAACTTCAAACGGATGCTAGCACTAACAAAAGTACATCAAATCCATCTTGGCTGTGATCTGAAGCCTTTGTGCTGCAGAGATTGAGCACGGCCAAGCCCAAGCGCCATTCTTCATTTGGATCATCCTGGAGTGAAGTCCAGGGTTGAAAAATAGCCTTCACCTCATTTGACTTTAGTTGATTCCAGCAACATTAGCCGATAATGTTTTTGTGGCTCTGCCATGATATACAAGTTCTGAAATCTCGCTGTCGTTTCCA TGGT AATATGTAAATGATTTTTTGATGGACTAACCTGGTCATTTGACTGGATTTTTTTAGTTCGGAGGCTTAAAGACTC]
[+] EMBL CB639750 [ CCCCCGCCTCCACCTCCGCGCGGTCGCCGCCGGCGAGGAGGCGGCGCCGGACGAGCTCCTCTCCTTCCCCGCCACGCCGTAGCATCCTCCTCCTCCCCCGCGCGCGCGCCGCTGGGCGAGCAAGTCTGGGGGCCAGGAGCGAGCAGCGCGGCGCGGCGCGGCCCGGCCAGGCCTCTCATTCCACCACCACTGGCGCCCATCTCGGCGGCTCGGATCGAATTCAGAGTTTCGTCGCTTGCTCTCCGACGGCGGCGATGATGGAGGCGGAGGAGGCGTTCCCTCCGCAGAGGAATCCCCGCCGCGCGCGGCGCCGCGACCTCAACGCACTGGATCCCAGTTTAGAAGAGTCTGATGGAGAGGATATTGGTGTTCCAGAAGTTGGCATGGTGTTCAATAACCACACGGAGGTCAACCGATTCTACCGAAGGTATGCTCGCCGTGTTGGCTTTGGGGTGTCTGTTAGGAGGTCCTCATTTTCACAAGAGGGCACCTGCTTATATCTGGAGCTCATGTGCTGCANAGGAGGGCGGC ]
[+] EMBL CB639779 [ CCCCCGCCTCCACCTCCGCGCGGTCGCCGCCGGCGAGGAGGCGGCGCCGGACGAGCTCCTCTCCTTCCCCGCCACGCCGTAGCATCCTCCTCCTCCCCCGCGCGCGCGCCGCTGGGCGAGCAAGTCTGGGGGCCAGGAGCGAGCAGCGCGGCGCGGCGCGGCCCGGCCAGGCCTCTCATTCCACCACCACTGGCGCCCATCTCGGCGGCTCGGATCGAATTCAGAGTTTCGTCGCTTGCTCTCCGACGGCGGCGATGATGGAGGCGGAGGAGGCGTTCCCTCCGCAGAGGAATCCCCGCCGCGCGCGGCGCCGCGACCTCAACGC ]
[+] EMBL D43616 [ ATCAATTTATGAGTGCCGATACTCATGGGTTCCTGTTTTTCTTAAAGATACATTTTGGGCAGGAATGTCTGCTACACAAAGAAATGAAAATATCATTCCTTTCTTTGATGGATATGTAGATTTGAAAACCACATTGAAGCACTTTCTTGGGAAGTATGAGATGGCCTTGCAGAGCAAATATGAAAAGGAGGCCCAAGCAGATTTTGAGACATTCCATANGCAGCGCCC ]
[+] EMBL CA767197 [ GACTATGAGCAAGATCTTTACAGTGACAAATAACACAGATAAAAATGATTTAACTTGTATCTGTGGAGGTTTCCAGTTTAATGGAATATTGTGTAGGCATAGTCTCTCAGTCCTCAAGTTTCAACAGGTTCGTGAAATTCCTCCACACTATGTTCTTGATAGGTGGAAAAAGGATTTCAGACAGTTGCATGTGATGGGGCGTCCTTCAAGTGATGTTGTTCCAAACAATCGTGTGGATCGATATGATTATTTGTCAATGAGATGTCTGCAGCTAGTTGATTCAGCAGTCCTATCAGATAAATATCGTCTTGCTTTGAGATTGGTGAGGGAGATGGAGAAGTTTATGTTAAACGGCAACACGCATGATGATACACAACCAAGGATCAAGTCTCGCATTCCTAAAGCAAATAAACCAAATACAGTGGTTGGTCAAAATCTGGTAAACGTTGGCACTTACAATGGAAATGATAGGCCCAAAGCAACAACAGAGGCTTCTTCGTTAACACAGGGATTGGATGTCCAGAAGGGAGGAGCAGAAAAGGGCATAGTTCCTGCTGGTTACATTGGACTGCCAGCTAATGNTCAGCAATTCGTAGGCAGTCAAACAGCGATTCGCCCAAGCATTGTGTATATGGNTCCGAGTGGTGNTGACCCACAGGCATTTGGAAATGGTGGTCTGNTGCCT GGTGNGTACCA GC AGATGNTNCAGGTACCCCA GCAGCCAAATGGNACCATGCCAGATACTTCA GCA AATGGNAAAAAGAAGCGGCCTCGTGCCCAGAAGCC ACAGAGGCATCTGAACAGGCNAATGGNANCCCGGCAACAGGACCC CATCTGGGTAGATTGGA CAGN TTNTCAT TTAnt ]
[+] EMBL BI803034 [ ATAT TTCCGAGTGGTG TGACCCACAGGCATTTGGAAATGGTGTTCTGATGCCT GTTGTGTACCA GC AGATGTTCCAGGTACCCCA GCAGCCAAATGGAACCATGCCAGATACTTCA GCA AATGGAAAAAGGAAGCGGCCTCGTGCCCAGAAGCC ACAGAGGCATCTGAACAGTCAAATGGAACCCCGGCAACAGGACCCACATCTGGGTAGATTGAA CAGT TTCTCAT TTAGTCAGAACTCAGAACAGGTCTTTGTAAATATGCAGAGGAAGTGAAGAGTTGCCTAGAGAACTTCAAACGGATGCTAGCACTAAC AAAGTACATCAAATCCATCTTGGCTGTGATCTGAAGCCTTTGTGCTGCAGAGATTGAGCACGGCCAAGCCCAAGCGCCATTCTTCATTTGGATCATCCTGGAGTGAAGTCCAGGGTTGAAAAATAGCCTTCACCTCATTTGACTTTAGTTGATTCCAGCAACATTAGCCGATAATGTTTTTGTGGCTCTGCCATGATATACAAGTTCTGAAATCTCGCTGTCGTTTCCA TGGTCAATATGTAAATGATTTTTTGATGGACTAAAAAA ]
[+] EMBL BI811732 [ AATGGTGTTCTGATGCCTGGTTGGGTACCACGCAAGATGTTCCAAGTACCCCACGCAGCCAGATGGAACCATGCCAGATACTTCACGCACAATGGAAAAAGGAA CGGCCTCGTGCCCAGAAGCC ACAGAGGCATCTGAACAGTCAAATGGAACCCCGGCAACAGGACCCACATTTGGGTAGATTGAACCAGTGTGCTCATGTTAGTCAGAACTCAGAACAGGTCTTTGTAAATATGCAGAGGAAGTGAAGAGTTGCCTAGAGAACTTCAAACGGATGCTAGCACTAAC AAAGTACATCAAATCCATCTTGGCTGTGATCTGAAGCCTTTGTGCTGCAGAGATTGAGCACGGCCAAGCCCAAGCGCCATTCTTCATTTGGATCATCCTGGAGTGAAGTCCAGGGTTGAAAAATAGCCTTCACCTCATTTGACTTTAGTTGATTCCAGCAACATTAGCCGATAATGTTTTTGTGGCTCTGCCATGATATACAAGTTCTGAAATCCCGCTGTCGTTTCCACTGGT AATATGTAAATGATTTTTTGATGGACTAAAAAAaaaa ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||