cluster # 10117

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Oryza sativa
cluster # 10117 cluster # 10117 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10117#0 length = 557 sequences # 7
consensusID : consensus_10117#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 557
fasta sequence
                              [TTTTTTTAAAAGTCAAAACTGCATACGCATTTGTCTGATGAATATTATTCAGATCAGAGACCAATATTTGTATACGCTCAAATCAAATATTCGAAC-ATGTTGAAACATGCATATGAATTGAAATTCCGGCAAAACGGTGGCATATGGCAATCAATCCCACCAGCCAACAACACGGTCTTAGTACTTGGGCGGGTCGGAGAAGAAGCTGTTGATGCCGGGCATGATCTCGGGGCGCTTCCCGTCGATGAACTTCCTGAAGCCGTGCTGCGAGTAGCGCTTCCCCTCGTCGAAGTTCTC-CAGCACACC-GGCCGCCCTCTTCTCCTTCAACACCCTGACTTCGGGGTTGCCGG---TGATGTTGCGGACGAGCTGGCCGACGCAGATGGAGACGGCG-ACGCCGGTGGCGAGGAAGAGCGGGTACACCTCGGGGCGGATCCACCTCTTCCAGGCGGCGGAGGACGCAGCGGCGGCGGCCATGGCTGGCTTGCTTTGCTGCTGCTTTTCTTC-TTGCGGCGCAAGAAGGCGAGGCGAGGCTAGGAGAGACCTCTGGCGCTTCCGAA]

[+] EMBL CF297687             [TTTTTTTAAAAGTCAAAACTGCATACGCATTTGTCTGATGAATATTATTCAGATCAGAGACCAATATTTGTATACGCTCAAATCAAATATTCGAAC ATGTTGAAACATGCATATGAATTGAAATTCCGGCAAAACGGTGGCATATGGCAATCAATCCCACCAGCCAACAACACGGTCTTAGTACTTGGGCGGGTCGGAGAAAAAGCTGTTGATGCCGGGCATGATCTCGGGGCGCTTCCCGTCGATGAACTTCCTGAAGCCGTGCTGCGAGTAGCGCTTCCCCTCGTCGAAGTTCTC CAGCACACC GGCCGCCCTCTTCTCCTTCAACACCCTGACTTCGGGGTTGCCGG   TGATGTTGCGGACGAGCTGGCCGACGCAGATGGAGACGGCG ACGCCGGTGGCGAGGAAGAGCGGGTACACCTCGGGGCGGATCCACCTCTTCCAGGCGGCGGAGGACGCAGCGGCGGCGGCCATGGCTGGCTTGCTTTGCTGCTGCTTTTCTTC TTGCGGCGCAAGAAGGCGAGGCGAGGCTAGGAGAGACCTCTGGCGCTTCCGA ]
[-] EMBL AU070754             [TTTTTTTAAAAGTCAAAACTGCATACGCATTTGTCTGATGAATATTATTCAGATCAGAGACCAATATTTGTATACGCTCAAATCAAATATTCGAAC ATGTTGAAACATGCATATGAATTGAAATTCCGGCAAAACGGTGGCATATGGCAATCAATCCCACCAGCCAACAACACGGTCTTAGTACTTGGGCGGGTCGGAGAAGAAGCTGTTGATGCCGGGCATGATCTCGGGGCGCTTCCCGTCGATGAACTTCCTGAAGCCGTGCTGCGAGTAGCGCTTCCCCTCGTCGAAGTTCTC CAGCACACC GGCCG                                                                                                                                                                                                                                                           ]
[-] EMBL CF297688             [                             TTTGTCTGATGAATATTATTCAGATCAGAGACCAATATTTGTATACGCTCAAATCAAATATTCGAAC ATGTTGAAACATGCATATGAATTGAAATTCCGGCAAAACGGTGGCATATGGCAATCAATCCCACCAGCCAACAACACGGTCTTAGTACTTGGGCGGGTCGGAGAAGAAGCTGTTGATGCCGGGCATGATCTCGGGGCGCTTCCCGTCGATGAACTTCCTGAAGCCGTGCTGCGAGTAGCGCTTCCCCTCGTCGAAGTTCTC CAGCACACC GGCCGCCCTCTTCTCCTTCAACACCCTGACTTCGGGGTTGCCGG   TGATGTTGCGGACGAGCTGGCCGACGCAGATGGAGACGGCG ACGCCGGTGGCGAGGAAGAGCGGGTACACCTCGGGGCGGATCCACCTCTTCCAGGCGGCGGAGGACGCAGCGGCGGCGGCCATGGCTGGCTTGCTTTGCTGCTGCTTTTCTTC TTGCGGCGCAAGAAGGCGAGGCGAGGCTAGGAGAGACCTCTGGCGCTTCCGAA]
[+] EMBL BU673506             [                                       GAATATTATTCAGATCAGAGACCAATATTTGTATACGCTCAAATCAAATATTCGAACTATGTTGAAACATG   ATGAATTGAAATTCCGGCAAAACGGTGGCATATGGCAATCAATCCCACCAGCCAACAACACGGTCTTAGTACTTGGGCGGGTCGGAGAAGAAGCTGTTGATGCCGGGCATGATCTCGGGGCGCTTCCCGTCGATGAACTTCCTGAAGCCGTGCTGCGAGTAGCGCTTCCCCTCGTCGAAGTTCTC CAGCACACC GGCCGCCCTCTTCTCCTTCAACACCCTGACTTCGGGGTTGCCGG   TGATGTTGCGGACGAGCTGGCCGACGCAGATGGAGACGGCG ACGCCGGTGGCGAGGAAGAGCGGGTACACCTCGGGGCGGATCCACCTCTTCCAGGCGGTGGAGGACGCGGTGGCGGCGGCCATGGCTGGCTTGCTTTGCTGCTGCTTTTCTTC TTGCGGCGCAAGAAGGCGAGGCGAGGCTAGGA                     ]
[+] EMBL BU673022             [                                         ATATTATTCAGATCAGAGACCAATA TTGTATACGCTCAAATCAAATATTCGAAC ATGTTGAAACATG   ATGAATTGAAATTCCGGCAAAACGGTGGCATATGGCAATCAATCCCACCAGCCAACAACACGGTCTTAGTACTTGGGCGGGTCGGAGAAGAAGCTGTTGATGCCGGGCATGATCTCGGGGCGCTTCCCGTCGATGAACTTCCTGAAGCCGTGCTGGGAATATCGCGTTCCCTCGTCGAAGTTCTCTCAGAACACCGGGGCG GCTCTTCTCCTTCAAAACCCTGAGATCGGGGTGGTCGGCGATGATGTGGAGGACGAGCTGGCCGACGCAGATGGAGACGGCG ACGCCGGTGGCGAGGAAGAGCGGGTACACCTCGGGGCGGATCCACCTCTTCCAGGCGGTGGAGGACGCGGCGGCGGCGTGCATGGCTGGCTTGCTTTGCTGCTGCTTTTCTTCTTTGCGGCGCAAGAAGGCGAGGCGAGGCTAGGAG                    ]
[-] EMBL CA998232             [                                                                                                     TGAAACATGCATATGAATTGAAATTCCGGCAAAACGGTGGCATATGGCAATCAATCCCACCAGCCAACAACACGGTCTTAGTACTTGGGCGGGTCGGAGAAGAAGCTGTTGATGCCGGGCATGATCTCGGGGCGCTTCCCGTCGATGAACTTCCTGAAGCCGTGCTGCGAGTAGCGCTTCCCCTCGTCGAAGTTCTC CAGCACACC GGCCGCCCTCTTCTCCTTCAACACCCTGACTTCGGGGTTGCCGG   TGATGTTGCGGACGAGCTGGCCGACGCAGATGGAGACGGCG ACGCCGGTGGCGAGGAAGAGCGGGTACACCTCGGGGCGGATCCACCTCTTCCAGGCGGCGGAGGACGCGGCGGCGGCGGCCATGGCTGGCTTGCTTTGCTGCTGCTTTTCTTC TTGCGGCGCAAGAAGGCGAGGCGAGGCTAGGAGAGA                 ]
[-] EMBL C26848               [                                                                                                                                                                                                                                                                                                                CACC GGCCGCNCTCTTCTCCTTCAANACCCTNACTTCGGGGTTGCCGG   TGATGTTNCGGACGAGCTGGCCGANGCAGATGGAGACGGCGNAC CCGGTGGCGAGGAAGANCGGGTACACCTCGGGGCGGATCCACCTCTTCCAGGCGGCGGAGGANGCAGCGGCGGCGGCCATGGCTGGCTTGCTTTGCTGCTGCTTTTCTTC TTGCGGCGCAAGAAGGCGAGGCGAGGCTAGGAGAGACCTTTGGCGtcntntn ]




>consensus_10117#0
TTTTTTTAAAAGTCAAAACTGCATACGCATTTGTCTGATGAATATTATTCAGATCAGAGA
CCAATATTTGTATACGCTCAAATCAAATATTCGAACATGTTGAAACATGCATATGAATTG
AAATTCCGGCAAAACGGTGGCATATGGCAATCAATCCCACCAGCCAACAACACGGTCTTA
GTACTTGGGCGGGTCGGAGAAGAAGCTGTTGATGCCGGGCATGATCTCGGGGCGCTTCCC
GTCGATGAACTTCCTGAAGCCGTGCTGCGAGTAGCGCTTCCCCTCGTCGAAGTTCTCCAG
CACACCGGCCGCCCTCTTCTCCTTCAACACCCTGACTTCGGGGTTGCCGGTGATGTTGCG
GACGAGCTGGCCGACGCAGATGGAGACGGCGACGCCGGTGGCGAGGAAGAGCGGGTACAC
CTCGGGGCGGATCCACCTCTTCCAGGCGGCGGAGGACGCAGCGGCGGCGGCCATGGCTGG
CTTGCTTTGCTGCTGCTTTTCTTCTTGCGGCGCAAGAAGGCGAGGCGAGGCTAGGAGAGA
CCTCTGGCGCTTCCGAA
clustalw multiple alignements is not computed in this case