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Oryza sativa
cluster # 10118 cluster # 10118       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10118#0 length = 2161 sequences # 5  
consensus_10118#1 length = 429 sequences # 1  
consensus_10118#2 length = 408 sequences # 1  

consensusID : consensus_10118#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2161
fasta sequence
                              [GTTCATCCAAGCTAAGCTGAGCTGAGCTGAGATGGGCGAGAGATGTAGAAGTAGATAGAATTAAG-CTAGCTAG-AGAGG-TAGATATATAGC-TGTGGTGAGGAAGTTTCCAGAAGGTTCTAGAAGATCGCCATGGGCAACACGTGCTGCGTCGCTCC-GGCTACCACCGATGAGGTGGGCGCGCCGCCGCGAGATCATCATCACGCGGCCAAGAAGTCGCCGGCGCCGTCGGCGACGACGACGACGGCGACGAGGCAGAGGCATGGCCAAGAACCCAAGCCCAAGCCCAAGCCCAGGGCGAGGGCGAAGCCCAACCCGTACGACTGGGCGCCGCCGCGGGTGCTGCCGGCGAGGGGCGGCGCCGCCGCGTCCGCGGTGCGCGTGCTGGAGGGCGTGGTGCCGCACCACCCGCGGCTGCGCGTCACGGACAAGTACCAGCTCGGCCGCGAGCTGGGGCGCGGCGAGTTCGGGGTGACGCACCTCGCCACGGACCGCGCGACGCGGGAGCGGCTGGCGTGCAAGTCCATCCCGAAGCGCCGCCTCCGCACCGCCGTGGACGTCGCCGACGTGCGGCGCGAGGTGGCCATCATGGCGTCGCTCCCGGACCACCCGGCGCTGGTGCGCCTCCGCGCCGCCTACGAGGACGCCGACGCGGTGCACCTGGTGATGGAGCTCTGCGACGGCGGCGAGCTGTTCGACCGGATCGTGGCGAGGGGCCGGTACACGGAGCGCGCCGCGGCCGCCGCGGCGCGGACGGTGGCGGAGGTGGTGCGCGCGTGCCACGCCCACGGCGTGATGCACCGCGACCTCAAGCCGGAGAACTTCCTCTACGCCGGCAAGGCCGAGGACGCGCAGCTCAAGGCCATCGATTTCGGCCTCTCCGTCTTCTTCCGACCTGGGGAGAGGTTCAGGGAGATCGTGGGGAGCCCGTACTACATGGCGCCGGAGGTGCTCCGGCGAGACTACGGCCCGGAGGTGGACATCTGGTCCGCCGGCGTCATCCTCTACATCCTCCTGTGCGGCGTCCCGCCGTTCTGGGCCGAGACGGAGCAGGGCGTGGCGCGCGCCATCCTCCGCGGCGCCGCCGACTTCGACCGGGAGCCATGGCCGCGCATCTCCCGCGCCGCCAAGTCCCTCGTCCGCCAGATGCTCGACGTGGACCCGCGCCGCCGCCCCACGGCGCAGCAGGTGCTCGACCACCCCTGGCTCCACCACGCCGCCCGCGCCCCCAACGTCCCCCTCGGCGACGTCGTCCGCGCCCGCCTCAAGCAGTTCTCCCTCATGAACCGCCTCAAGAAGAAGGCCATGCGGGTGATCGCGGAACACCTGTCGGTAGAGGAGGTGGAGGTGATCAAGGACATGTTCGCGCTCATGGACACCGACAACAACGGCAGGGTTACGCTCCAGGAGCTCAAGGACGGCCTCACCAAGGTCGGCTCCAAGCTCGCCGAGCCCGAGATGGAGCTTCTCATGGAGGCCGCGGATGTGGATGGCAATGGGTACCTGGACTACGGCGAGTTCGTGGCGGTGACCATCCACCTGCAGCGCCTCTCCAACGACAACCACCTCCGCACGGCCTTCCTCTTCTTCGACAAGGACGGCAGCGGCTACATCGACCGCGCCGAGCTCGCCGACGCCCTCGCCGACGACTCCGGCCACGCCGACGACGCCGTGCTCGACCACATCCTTAGAGAAGTCGACACCGACAAGGATGGGCGGATCAGCTACGAGGAGTTCGTGGCGATGATGAAATCCGGGACGGATTGGAGGAAGGCGTCGCGGCAATACTCGAGGGAGCGGTTCAAGACGCTCAGCAACAGCCTCATCAAGGACGGCTCGATCACCATGGCGCGCTAGCTAGCTCGACGAATTCAGTCGATTCAGGCTTGAGAATTCATTGAGAATATGAGGTCGATGCAATGCTCGAA--TTTTTTTTTTTTGATGCATACTTCATTCGAATTTGAATTTGGGTTTTCCATTTCGTCCAATTTTTCTTTTGTACAATCTACTGTAGATCGATCGGTCGTCTATCTGAACCTTCTTTGTGTAGGATGTGTTAGTGAACGCTGGGATTGTTTCAGCATTCGTTGTACGTGTTTGAAATTGCGTCGGGTGTAATTATGTGGTAACGGTGGTAATCAAGCAAATTTACAGCAAATTCATT]

[+] EMBL AK105102             [GTTCATCCAAGCTAAGCTGAGCTGAGCTGAGATGGGCGAGAGATGTAGAAGTAGATAGAATTAAG CTAGCTAG AGAGG TAGATATATAGC TGTGGTGAGGAAGTTTCCAGAAGGTTCTAGAAGATCGCCATGGGCAACACGTGCTGCGTCGCTCC GGCTACCACCGATGAGGTGGGCGCGCCGCCGCGAGATCATCATCACGCGGCCAAGAAGTCGCCGGCGCCGTCGGCGACGACGACGACGGCGACGAGGCAGAGGCATGGCCAAGAACCCAAGCCCAAGCCCAAGCCCAGGGCGAGGGCGAAGCCCAACCCGTACGACTGGGCGCCGCCGCGGGTGCTGCCGGCGAGGGGCGGCGCCGCCGCGTCCGCGGTGCGCGTGCTGGAGGGCGTGGTGCCGCACCACCCGCGGCTGCGCGTCACGGACAAGTACCAGCTCGGCCGCGAGCTGGGGCGCGGCGAGTTCGGGGTGACGCACCTCGCCACGGACCGCGCGACGCGGGAGCGGCTGGCGTGCAAGTCCATCCCGAAGCGCCGCCTCCGCACCGCCGTGGACGTCGCCGACGTGCGGCGCGAGGTGGCCATCATGGCGTCGCTCCCGGACCACCCGGCGCTGGTGCGCCTCCGCGCCGCCTACGAGGACGCCGACGCGGTGCACCTGGTGATGGAGCTCTGCGACGGCGGCGAGCTGTTCGACCGGATCGTGGCGAGGGGCCGGTACACGGAGCGCGCCGCGGCCGCCGCGGCGCGGACGGTGGCGGAGGTGGTGCGCGCGTGCCACGCCCACGGCGTGATGCACCGCGACCTCAAGCCGGAGAACTTCCTCTACGCCGGCAAGGCCGAGGACGCGCAGCTCAAGGCCATCGATTTCGGCCTCTCCGTCTTCTTCCGACCTGGGGAGAGGTTCAGGGAGATCGTGGGGAGCCCGTACTACATGGCGCCGGAGGTGCTCCGGCGAGACTACGGCCCGGAGGTGGACATCTGGTCCGCCGGCGTCATCCTCTACATCCTCCTGTGCGGCGTCCCGCCGTTCTGGGCCGAGACGGAGCAGGGCGTGGCGCGCGCCATCCTCCGCGGCGCCGCCGACTTCGACCGGGAGCCATGGCCGCGCATCTCCCGCGCCGCCAAGTCCCTCGTCCGCCAGATGCTCGACGTGGACCCGCGCCGCCGCCCCACGGCGCAGCAGGTGCTCGACCACCCCTGGCTCCACCACGCCGCCCGCGCCCCCAACGTCCCCCTCGGCGACGTCGTCCGCGCCCGCCTCAAGCAGTTCTCCCTCATGAACCGCCTCAAGAAGAAGGCCATGCGGGTGATCGCGGAACACCTGTCGGTAGAGGAGGTGGAGGTGATCAAGGACATGTTCGCGCTCATGGACACCGACAACAACGGCAGGGTTACGCTCCAGGAGCTCAAGGACGGCCTCACCAAGGTCGGCTCCAAGCTCGCCGAGCCCGAGATGGAGCTTCTCATGGAGGCCGCGGATGTGGATGGCAATGGGTACCTGGACTACGGCGAGTTCGTGGCGGTGACCATCCACCTGCAGCGCCTCTCCAACGACAACCACCTCCGCACGGCCTTCCTCTTCTTCGACAAGGACGGCAGCGGCTACATCGACCGCGCCGAGCTCGCCGACGCCCTCGCCGACGACTCCGGCCACGCCGACGACGCCGTGCTCGACCACATCCTTAGAGAAGTCGACACCGACAAGGATGGGCGGATCAGCTACGAGGAGTTCGTGGCGATGATGAAATCCGGGACGGATTGGAGGAAGGCGTCGCGGCAATACTCGAGGGAGCGGTTCAAGACGCTCAGCAACAGCCTCATCAAGGACGGCTCGATCACCATGGCGCGCTAGCTAGCTCGACGAATTCAGTCGATTCAGGCTTGAGAATTCATTGAGAATATGAGGTCGATGCAATGCTCGAATTTTTTTTTTTTTTGATGCATACTTCATTCGAATTTGAATTTGGGTTTTCCATTTCGTCCAATTTTTCTTTTGTACAATCTACTGTAGATCGATCGGTCGTCTATCTGAACCTTCTTTGTGTAGGATGTGTTAGTGAACGCTGGGATTGTTTCAGCATTCGTTGTACGTGTTTGAAATTGCGTCGGGTGTAATTATGTGGTAACGGTGGTAATCAAGCA                   ]
[+] EMBL AU164044             [                                                AAGTAGATAGAATTAAGCCTAGCTAGAAGAGGTTAGATATATAGCTTGTGGTNAGNAAGTTTCCAGAAGGTTCTAGAAGATCGCCATGGGCAACACGTGTTGCGTCGCTCCGGGCTACCACCGATGAGGTGGGCGCGCCGCCGCGAGATCATCATCACGCGGCCAAGAAGTCGCCGGCGCCGTCGGCGACGACGACGACGGCGACGAGGCAGAGGCATGGCCAAGAACCCAAGCCCAAGCCCAAGCCCAGGGCGAGGGCGAAGCCCAACCCGTACGACTGGGCGCCGCCGCGGGTGCTGCCGGCGAGGGGCGGCGCCGCCGCGTCCGCGGTGCGCGTGCTGGAGGGCGTGGTGCCGCACCACCCGCGGCTGCGCGTCACGGACAAGTACCAGCTCGGCCGCGAGCTGGGGCGCGGCGAGTTCGGGGTGACGCACCTCGCCACGGACCGCGCGACGCGGGAGCGGCTGGCGTGCAAGTCCATCCCGAAGCGCCGCCTCCGCACCGCCGTGGACGTCGCCGACGTGCGGCGCGAGGTGGCCATCATGGCGTCGCTCCCGGACCACCCGGCGCTGGTGCGCCTCCGCGCCGCCTACGAGGACGCCGACGCGGTGCACCTGGTGATGGAGCTCTGCGACGGCGGCGAGCTGTTCGACCGGATCGTGGCGAGGGGCCGGTACAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BU667052             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        gCGCGGGGCGGACGGTGGCGGAGGTGGTGCGCGCGTGCCACGCCCACGGCGTGATGCACCG GAACTCAAGCCGGAGAACTTCCTCTACGCCGGCAAG  CGAGGACGCGCAG TCAAGG CATCGATTTCGG CTCTCCGTCTTCTTCCGACCTGGGGAGAGGTTCAGGGAGATCGTGGGGAGCCCGTACTACATGGCGCCGGAGGTGCTCCGGCGAGACTACGG CCGGAGGTGGACATCTGGTCCG CGGCGTCATCCTCTACATCCTCCTGTGCGGCGTCCCGCCGTTTTGGGCCGAGACGGAGCAGGGCGTGGCGCGCGCCATCCTCCGCGGCGCCGCCGACTTCGACCGGGAGCCATGGCCGCGCATCTCCCGCGCCGCCAAGTCCCTCGTCCGCCAGATGCTCGACGTGGACCCGCGCCG CG CCCACGG GCAGCAGGTGCTCGACCAACCCTGGCTCCA CACGCCG CCGAGCCCCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB619305             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CCTTTCCAATGACAACCACCTCCGCACGGCCTTCCTTTTTTTTGACAAGGACGGCAGCGGGTACATCGACCGCGCCGAGCTTGCCGACGCCCTCGCCGAAGACTCCGGCCACGCCGACGACGCCGTGCTCGACCACATCCTTAGAGAAGTCGACACCGACAAGGATGGGCGGATCAGCTACGAGGAGTTTGTGGCGATGATGAAATCCGGGACGGATTGGAGGAAGGCGTCGCGGCAATACTCGAGGGAGCGGTTCAAGACGCTCAGCAACAGCCTCATCAAGGACGGCTCGCTCACCATGGCGCGCTAGCTAGCTTGACGAATTCAGTCGATTCAGGCTTGAGAATTCATTGAGAATATGAGGTCGATGCAATGCTTGAA   ATTTTTTTTTTGATGCATACTTCATTCGAATTTGAATTTGGGTTTTCCATTTCGTCCAATTTTTCTTTTGTACAATCTACTGTAGATCGATCGGTCGTCTATTTGAACCTTCTTTGTGTAGGATGTGTTAGTGAACGCTGGGATTGTTTCAGCATTCGTTGTACGTGTTTGAAATTGCGTCGGGTGTAATTATGTGGTAACGGTGGTAATCAAGCAAATTTACAGCAAATTCATT]
[+] EMBL AU174766             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ACACCGACAAGGATGGGCGGATCAGCTACGAGGAGTTCGTGGCGATGATGAAATCCGGGACGGATTGGAGGAAGGCGTCGCGGCAATACTCGAGGGAGCGGTTCAAGACGCTCAGCAACAGCCTCATCAAGGACGGCTCGATCACCATGGCGCGCTAGCTAGCTCGACGAATTCAGTCGATTCAGGCTTGAGAATTCATTGAGAATATGAGGTCGATGCAATGCTCGAA  TTTTTTTTTTTTGATGCATACTTCATTCGAATTTGAATTTGGGTTTTCCATTTCGTCCAATTTTTCTTTTGTACAATCTACTGTAGATCGATCGGTCGTCTATCTGAACCTTCTTTGTGTAGGATGTGTTAGTGAACGCTGGGATTGTTTCAGCATTCGTTGTACGTGTTTGAAATTGCGTCGGGTGTAATTATGTGGTAACGGTGGTAATCAAGCAAATTTACAGCAAAaaaaa ]


>consensus_10118#0 GTTCATCCAAGCTAAGCTGAGCTGAGCTGAGATGGGCGAGAGATGTAGAAGTAGATAGAA TTAAGCTAGCTAGAGAGGTAGATATATAGCTGTGGTGAGGAAGTTTCCAGAAGGTTCTAG AAGATCGCCATGGGCAACACGTGCTGCGTCGCTCCGGCTACCACCGATGAGGTGGGCGCG CCGCCGCGAGATCATCATCACGCGGCCAAGAAGTCGCCGGCGCCGTCGGCGACGACGACG ACGGCGACGAGGCAGAGGCATGGCCAAGAACCCAAGCCCAAGCCCAAGCCCAGGGCGAGG GCGAAGCCCAACCCGTACGACTGGGCGCCGCCGCGGGTGCTGCCGGCGAGGGGCGGCGCC GCCGCGTCCGCGGTGCGCGTGCTGGAGGGCGTGGTGCCGCACCACCCGCGGCTGCGCGTC ACGGACAAGTACCAGCTCGGCCGCGAGCTGGGGCGCGGCGAGTTCGGGGTGACGCACCTC GCCACGGACCGCGCGACGCGGGAGCGGCTGGCGTGCAAGTCCATCCCGAAGCGCCGCCTC CGCACCGCCGTGGACGTCGCCGACGTGCGGCGCGAGGTGGCCATCATGGCGTCGCTCCCG GACCACCCGGCGCTGGTGCGCCTCCGCGCCGCCTACGAGGACGCCGACGCGGTGCACCTG GTGATGGAGCTCTGCGACGGCGGCGAGCTGTTCGACCGGATCGTGGCGAGGGGCCGGTAC ACGGAGCGCGCCGCGGCCGCCGCGGCGCGGACGGTGGCGGAGGTGGTGCGCGCGTGCCAC GCCCACGGCGTGATGCACCGCGACCTCAAGCCGGAGAACTTCCTCTACGCCGGCAAGGCC GAGGACGCGCAGCTCAAGGCCATCGATTTCGGCCTCTCCGTCTTCTTCCGACCTGGGGAG AGGTTCAGGGAGATCGTGGGGAGCCCGTACTACATGGCGCCGGAGGTGCTCCGGCGAGAC TACGGCCCGGAGGTGGACATCTGGTCCGCCGGCGTCATCCTCTACATCCTCCTGTGCGGC GTCCCGCCGTTCTGGGCCGAGACGGAGCAGGGCGTGGCGCGCGCCATCCTCCGCGGCGCC GCCGACTTCGACCGGGAGCCATGGCCGCGCATCTCCCGCGCCGCCAAGTCCCTCGTCCGC CAGATGCTCGACGTGGACCCGCGCCGCCGCCCCACGGCGCAGCAGGTGCTCGACCACCCC TGGCTCCACCACGCCGCCCGCGCCCCCAACGTCCCCCTCGGCGACGTCGTCCGCGCCCGC CTCAAGCAGTTCTCCCTCATGAACCGCCTCAAGAAGAAGGCCATGCGGGTGATCGCGGAA CACCTGTCGGTAGAGGAGGTGGAGGTGATCAAGGACATGTTCGCGCTCATGGACACCGAC AACAACGGCAGGGTTACGCTCCAGGAGCTCAAGGACGGCCTCACCAAGGTCGGCTCCAAG CTCGCCGAGCCCGAGATGGAGCTTCTCATGGAGGCCGCGGATGTGGATGGCAATGGGTAC CTGGACTACGGCGAGTTCGTGGCGGTGACCATCCACCTGCAGCGCCTCTCCAACGACAAC CACCTCCGCACGGCCTTCCTCTTCTTCGACAAGGACGGCAGCGGCTACATCGACCGCGCC GAGCTCGCCGACGCCCTCGCCGACGACTCCGGCCACGCCGACGACGCCGTGCTCGACCAC ATCCTTAGAGAAGTCGACACCGACAAGGATGGGCGGATCAGCTACGAGGAGTTCGTGGCG ATGATGAAATCCGGGACGGATTGGAGGAAGGCGTCGCGGCAATACTCGAGGGAGCGGTTC AAGACGCTCAGCAACAGCCTCATCAAGGACGGCTCGATCACCATGGCGCGCTAGCTAGCT CGACGAATTCAGTCGATTCAGGCTTGAGAATTCATTGAGAATATGAGGTCGATGCAATGC TCGAATTTTTTTTTTTTGATGCATACTTCATTCGAATTTGAATTTGGGTTTTCCATTTCG TCCAATTTTTCTTTTGTACAATCTACTGTAGATCGATCGGTCGTCTATCTGAACCTTCTT TGTGTAGGATGTGTTAGTGAACGCTGGGATTGTTTCAGCATTCGTTGTACGTGTTTGAAA TTGCGTCGGGTGTAATTATGTGGTAACGGTGGTAATCAAGCAAATTTACAGCAAATTCAT T



consensusID : consensus_10118#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 429
fasta sequence
                              [AGCTAAGCTGAGCTGAGCTGAGATGGGCGAGAGATGTAGAAGTAGATAGAATTAAGCTAGCTAGAGAGGTAGATATATAGCTGTGGTGAGGAAGTTTCCAGAAGGTTCTAGAAGATCGCCATGGGCAACACGTGCTGCGTCGCTCCGGCTACCACCGATGAGGTGNGCGCGCCGCCGCGAGATCATCATCACGCGGCCAAGAAGTCGCCGGNGCCGTCGNGACGACGACGACGCGACGANGGCAGAGGCATGGCCAAGAACCCAAGCCCAAGCCCAAGCCCAGGGCGAGGGCGACCAAACCCCGTACGACTTNGGCGCCGCCGCGGGTGCTNCCGGCGAGGGGCCGGCGCGCNGGTCCCGGGTTGCGCGTGCTTTGAGGGCGTTGTNCCGAACAACCGCGGTTCGNGTCACGGCAAGTACCAATTTGGC]

[+] EMBL OSC2901              [AGCTAAGCTGAGCTGAGCTGAGATGGGCGAGAGATGTAGAAGTAGATAGAATTAAGCTAGCTAGAGAGGTAGATATATAGCTGTGGTGAGGAAGTTTCCAGAAGGTTCTAGAAGATCGCCATGGGCAACACGTGCTGCGTCGCTCCGGCTACCACCGATGAGGTGNGCGCGCCGCCGCGAGATCATCATCACGCGGCCAAGAAGTCGCCGGNGCCGTCGNGACGACGACGACGCGACGANGGCAGAGGCATGGCCAAGAACCCAAGCCCAAGCCCAAGCCCAGGGCGAGGGCGACCAAACCCCGTACGACTTNGGCGCCGCCGCGGGTGCTNCCGGCGAGGGGCCGGCGCGCNGGTCCCGGGTTGCGCGTGCTTTGAGGGCGTTGTNCCGAACAACCGCGGTTCGNGTCACGGCAAGTACCAATTTGGC]


>consensus_10118#1 AGCTAAGCTGAGCTGAGCTGAGATGGGCGAGAGATGTAGAAGTAGATAGAATTAAGCTAG CTAGAGAGGTAGATATATAGCTGTGGTGAGGAAGTTTCCAGAAGGTTCTAGAAGATCGCC ATGGGCAACACGTGCTGCGTCGCTCCGGCTACCACCGATGAGGTGNGCGCGCCGCCGCGA GATCATCATCACGCGGCCAAGAAGTCGCCGGNGCCGTCGNGACGACGACGACGCGACGAN GGCAGAGGCATGGCCAAGAACCCAAGCCCAAGCCCAAGCCCAGGGCGAGGGCGACCAAAC CCCGTACGACTTNGGCGCCGCCGCGGGTGCTNCCGGCGAGGGGCCGGCGCGCNGGTCCCG GGTTGCGCGTGCTTTGAGGGCGTTGTNCCGAACAACCGCGGTTCGNGTCACGGCAAGTAC CAATTTGGC



consensusID : consensus_10118#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 408
fasta sequence
                              [CTGTCGGTAGAGGAGGTGGAGGTGACCATCCACCTGCAGCGCCTCTCCAACGACAACCACCTCCGCACGGCCTTCCTCTTCTTCGACAAGGACGGCAGCGGCTACATCGACCGCGCCGAGCTCGCCGACGCCCTCGCCGACGACTCCGGCCACGCCGACGACGCCGTGCTCGACCACATCCTTAGAGAAGTCGACACCGACAAGGATGGGCGGATCAGCTACGAGGAGTTCGTGGCGATGATGAAATCCGGGACGGATTGGAGGAAGGCGTCGCGGCAATACTCGAGGGAGCGGTTCAAGACGCTCAGCAACAGCCTCATCAAGGACGGCTCGATCACCATGGCGCGCTAGCTAGCTCGACGAATTCAGTCGATTCAGGCTTGAGAATTCATTGAGAATATGAGGTCG]

[+] EMBL AU174767             [CTGTCGGTAGAGGAGGTGGAGGTGACCATCCACCTGCAGCGCCTCTCCAACGACAACCACCTCCGCACGGCCTTCCTCTTCTTCGACAAGGACGGCAGCGGCTACATCGACCGCGCCGAGCTCGCCGACGCCCTCGCCGACGACTCCGGCCACGCCGACGACGCCGTGCTCGACCACATCCTTAGAGAAGTCGACACCGACAAGGATGGGCGGATCAGCTACGAGGAGTTCGTGGCGATGATGAAATCCGGGACGGATTGGAGGAAGGCGTCGCGGCAATACTCGAGGGAGCGGTTCAAGACGCTCAGCAACAGCCTCATCAAGGACGGCTCGATCACCATGGCGCGCTAGCTAGCTCGACGAATTCAGTCGATTCAGGCTTGAGAATTCATTGAGAATATGAGGTCG]


>consensus_10118#2 CTGTCGGTAGAGGAGGTGGAGGTGACCATCCACCTGCAGCGCCTCTCCAACGACAACCAC CTCCGCACGGCCTTCCTCTTCTTCGACAAGGACGGCAGCGGCTACATCGACCGCGCCGAG CTCGCCGACGCCCTCGCCGACGACTCCGGCCACGCCGACGACGCCGTGCTCGACCACATC CTTAGAGAAGTCGACACCGACAAGGATGGGCGGATCAGCTACGAGGAGTTCGTGGCGATG ATGAAATCCGGGACGGATTGGAGGAAGGCGTCGCGGCAATACTCGAGGGAGCGGTTCAAG ACGCTCAGCAACAGCCTCATCAAGGACGGCTCGATCACCATGGCGCGCTAGCTAGCTCGA CGAATTCAGTCGATTCAGGCTTGAGAATTCATTGAGAATATGAGGTCG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10118#0      GTTCATCCAAGCTAAGCTGAGCTGAGCTGAGATGGGCGAGAGATGTAGAAGTAGATAGAA 60
consensus_10118#2      ------------------------------------------------------------
consensus_10118#1      ------------------------------------------------------------
                                                                                   

consensus_10118#0      TTAAGCTAGCTAGAGAGGTAGATATATAGCTGTGGTGAGGAAGTTTCCAGAAGGTTCTAG 120
consensus_10118#2      ------------------------------------------------------------
consensus_10118#1      ------------------------------------------------------------
                                                                                   

consensus_10118#0      AAGATCGCCATGGGCAACACGTGCTGCGTCGCTCCGGCTACCACCGATGAGGTGGGCGCG 180
consensus_10118#2      ------------------------------------------------------------
consensus_10118#1      ------------------------------------------------------------
                                                                                   

consensus_10118#0      CCGCCGCGAGATCATCATCACGCGGCCAAGAAGTCGCCGGCGCCGTCGGCGACGACGACG 240
consensus_10118#2      ------------------------------------------------------------
consensus_10118#1      ------------------------------------------------------------
                                                                                   

consensus_10118#0      ACGGCGACGAGGCAGAGGCATGGCCAAGAACCCAAGCCCAAGCCCAAGCCCAGGGCGAGG 300
consensus_10118#2      ------------------------------------------------------------
consensus_10118#1      ------------------------------------------------------------
                                                                                   

consensus_10118#0      GCGAAGCCCAACCCGTACGACTGGGCGCCGCCGCGGGTGCTGCCGGCGAGGGGCGGCGCC 360
consensus_10118#2      ------------------------------------------------------------
consensus_10118#1      ------------------------------------------------------------
                                                                                   

consensus_10118#0      GCCGCGTCCGCGGTGCGCGTGCTGGAGGGCGTGGTGCCGCACCACCCGCGGCTGCGCGTC 420
consensus_10118#2      ------------------------------------------------------------
consensus_10118#1      ------------------------------------------------------------
                                                                                   

consensus_10118#0      ACGGACAAGTACCAGCTCGGCCGCGAGCTGGGGCGCGGCGAGTTCGGGGTGACGCACCTC 480
consensus_10118#2      ------------------------------------------------------------
consensus_10118#1      ------------------------------------------------------------
                                                                                   

consensus_10118#0      GCCACGGACCGCGCGACGCGGGAGCGGCTGGCGTGCAAGTCCATCCCGAAGCGCCGCCTC 540
consensus_10118#2      ------------------------------------------------------------
consensus_10118#1      ------------------------------------------------------------
                                                                                   

consensus_10118#0      CGCACCGCCGTGGACGTCGCCGACGTGCGGCGCGAGGTGGCCATCATGGCGTCGCTCCCG 600
consensus_10118#2      ------------------------------------------------------------
consensus_10118#1      ------------------------------------------------------------
                                                                                   

consensus_10118#0      GACCACCCGGCGCTGGTGCGCCTCCGCGCCGCCTACGAGGACGCCGACGCGGTGCACCTG 660
consensus_10118#2      ------------------------------------------------------------
consensus_10118#1      ------------------------------------------------------------
                                                                                   

consensus_10118#0      GTGATGGAGCTCTGCGACGGCGGCGAGCTGTTCGACCGGATCGTGGCGAGGGGCCGGTAC 720
consensus_10118#2      ------------------------------------------------------------
consensus_10118#1      ------------------------------------------------------------
                                                                                   

consensus_10118#0      ACGGAGCGCGCCGCGGCCGCCGCGGCGCGGACGGTGGCGGAGGTGGTGCGCGCGTGCCAC 780
consensus_10118#2      ------------------------------------------------------------
consensus_10118#1      ------------------------------------------------------------
                                                                                   

consensus_10118#0      GCCCACGGCGTGATGCACCGCGACCTCAAGCCGGAGAACTTCCTCTACGCCGGCAAGGCC 840
consensus_10118#2      ------------------------------------------------------------
consensus_10118#1      ------------------------------------------------------------
                                                                                   

consensus_10118#0      GAGGACGCGCAGCTCAAGGCCATCGATTTCGGCCTCTCCGTCTTCTTCCGACCTGGGGAG 900
consensus_10118#2      ------------------------------------------------------------
consensus_10118#1      ------------------------------------------------------------
                                                                                   

consensus_10118#0      AGGTTCAGGGAGATCGTGGGGAGCCCGTACTACATGGCGCCGGAGGTGCTCCGGCGAGAC 960
consensus_10118#2      ------------------------------------------------------------
consensus_10118#1      ------------------------------------------------------------
                                                                                   

consensus_10118#0      TACGGCCCGGAGGTGGACATCTGGTCCGCCGGCGTCATCCTCTACATCCTCCTGTGCGGC 1020
consensus_10118#2      ------------------------------------------------------------
consensus_10118#1      ------------------------------------------------------------
                                                                                   

consensus_10118#0      GTCCCGCCGTTCTGGGCCGAGACGGAGCAGGGCGTGGCGCGCGCCATCCTCCGCGGCGCC 1080
consensus_10118#2      ------------------------------------------------------------
consensus_10118#1      ------------------------------------------------------------
                                                                                   

consensus_10118#0      GCCGACTTCGACCGGGAGCCATGGCCGCGCATCTCCCGCGCCGCCAAGTCCCTCGTCCGC 1140
consensus_10118#2      ------------------------------------------------------------
consensus_10118#1      ------------------------------------------------------------
                                                                                   

consensus_10118#0      CAGATGCTCGACGTGGACCCGCGCCGCCGCCCCACGGCGCAGCAGGTGCTCGACCACCCC 1200
consensus_10118#2      ------------------------------------------------------------
consensus_10118#1      ------------------------------------------------------------
                                                                                   

consensus_10118#0      TGGCTCCACCACGCCGCCCGCGCCCCCAACGTCCCCCTCGGCGACGTCGTCCGCGCCCGC 1260
consensus_10118#2      ------------------------------------------------------------
consensus_10118#1      ------------------------------------------------------------
                                                                                   

consensus_10118#0      CTCAAGCAGTTCTCCCTCATGAACCGCCTCAAGAAGAAGGCCATGCGGGTGATCGCGGAA 1320
consensus_10118#2      ------------------------------------------------------------
consensus_10118#1      ------------------------------------------------------------
                                                                                   

consensus_10118#0      CACCTGTCGGTAGAGGAGGTGGAGGTGATCAAGGACATGTTCGCGCTCATGGACACCGAC 1380
consensus_10118#2      ------------------------------------------------------------
consensus_10118#1      ------------------------------------------------------------
                                                                                   

consensus_10118#0      AACAACGGCAGGGTTACGCTCCAGGAGCTCAAGGACGGCCTCACCAAGGTCGGCTCCAAG 1440
consensus_10118#2      ------------------------------------------------------------
consensus_10118#1      ------------------------------------------------------------
                                                                                   

consensus_10118#0      CTCGCCGAGCCCGAGATGGAGCTTCTCATGGAGGCCGCGGATGTGGATGGCAATGGGTAC 1500
consensus_10118#2      ------------------------------------------------------------
consensus_10118#1      -------------------------------------------AGCTAAGCTGAGCTGAG 17
                                                                                   

consensus_10118#0      CTGGACTACGGCGAGTTCGTGGCGGTGACCA----TCCACCTGCAGCGCCTCTCCAACGA 1556
consensus_10118#2      CTG---TCGGTAGAGGAGGTGGAGGTGACCA----TCCACCTGCAGCGCCTCTCCAACGA 53
consensus_10118#1      CTGAGATGGGCGAGAGATGTAGAAGTAGATAGAATTAAGCTAGCTAGAGAGGTAGATATA 77
                       ***   *  *        ** *  **    *    *   *  **        *  *   *

consensus_10118#0      CAACCACCTCCGCACGGCCTTCCTCTTCTTCGACAAGGACGGCAGCGGCTACATCGACCG 1616
consensus_10118#2      CAACCACCTCCGCACGGCCTTCCTCTTCTTCGACAAGGACGGCAGCGGCTACATCGACCG 113
consensus_10118#1      TAGCTGTGGTGAGGAAGTTTCCAGAAGGTTCTAGAAGATCGCCATGGGCAACACGTGCTG 137
                        * *            *  * *      *** * ***  ** **  *** ***    * *

consensus_10118#0      CGCCGAGCTCGCCGACGCCCTCGCCGACGACTCCGGC-CACGCCGACGACGCCGTGCTCG 1675
consensus_10118#2      CGCCGAGCTCGCCGACGCCCTCGCCGACGACTCCGGC-CACGCCGACGACGCCGTGCTCG 172
consensus_10118#1      CGTCG----CTCCG--GCTACCACCGATGAGGTGNGCGCGCCGCCGCGAGATCATCATCA 191
                       ** **    * ***  **   * **** **     ** * *  *  ***   * *  ** 

consensus_10118#0      ACCACATCCTTAGAGAAGTCGACACCGACAAGGATG-GGCGGATCAGCTACGAGGAGTTC 1734
consensus_10118#2      ACCACATCCTTAGAGAAGTCGACACCGACAAGGATG-GGCGGATCAGCTACGAGGAGTTC 231
consensus_10118#1      --CGCGGCCAAGAAGTCGCCGGNGCCGTCGNGACGACGACGACGCGACGANGGCAGAGGC 249
                         * *  **    **  * **   *** *  *     * **   *  * * *       *

consensus_10118#0      GTGGCGATGA--TGAAATCCGGGACGGATTGGAGGAAGGCGTCGCGGCAATACTCGAGGG 1792
consensus_10118#2      GTGGCGATGA--TGAAATCCGGGACGGATTGGAGGAAGGCGTCGCGGCAATACTCGAGGG 289
consensus_10118#1      ATGGCCAAGAACCCAAGCCCAAGCCCAAGCCCAGGGCGAGG--GCGACCAAACCCC---G 304
                        **** * **    **  **  * *  *    ***  *  *  *** * * ** *    *

consensus_10118#0      AGCGGTTCAAGACGCTCAGCAACAGCCTC-ATCAAGGA--CGGCTCGATCACCATGG--C 1847
consensus_10118#2      AGCGGTTCAAGACGCTCAGCAACAGCCTC-ATCAAGGA--CGGCTCGATCACCATGG--C 344
consensus_10118#1      TACGACTTNGGCGCCGCCGCGGGTGCTNCCGGCGAGGGGCCGGCGCGCNGGTCCCGGGTT 364
                         **  *   *   * * **    **  *   * ***   **** **     *  **   

consensus_10118#0      GCGCTAGCTAGCTCGACG--AATTCAGTCGATTCAGGCTTGAGAATTCATTGAGAATATG 1905
consensus_10118#2      GCGCTAGCTAGCTCGACG--AATTCAGTCGATTCAGGCTTGAGAATTCATTGAGAATATG 402
consensus_10118#1      GCGCGTGCTTTGAGGGCGTTGTNCCGAACAACCGCGGTTCGNG---TCACGGCAAGTACC 421
                       ****  ***     * **      *   * *    ** * * *   ***  *  * **  

consensus_10118#0      AGGTCGATGCAATGCTCGAATTTTTTTTTTTTGATGCATACTTCATTCGAATTTGAATTT 1965
consensus_10118#2      AGGTCG------------------------------------------------------ 408
consensus_10118#1      AATTTGGC---------------------------------------------------- 429
                       *  * *                                                      

consensus_10118#0      GGGTTTTCCATTTCGTCCAATTTTTCTTTTGTACAATCTACTGTAGATCGATCGGTCGTC 2025
consensus_10118#2      ------------------------------------------------------------
consensus_10118#1      ------------------------------------------------------------
                                                                                   

consensus_10118#0      TATCTGAACCTTCTTTGTGTAGGATGTGTTAGTGAACGCTGGGATTGTTTCAGCATTCGT 2085
consensus_10118#2      ------------------------------------------------------------
consensus_10118#1      ------------------------------------------------------------
                                                                                   

consensus_10118#0      TGTACGTGTTTGAAATTGCGTCGGGTGTAATTATGTGGTAACGGTGGTAATCAAGCAAAT 2145
consensus_10118#2      ------------------------------------------------------------
consensus_10118#1      ------------------------------------------------------------
                                                                                   

consensus_10118#0      TTACAGCAAATTCATT 2161
consensus_10118#2      ----------------
consensus_10118#1      ----------------
                                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)