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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10121#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 3788 fasta sequence
[GCCACTCGATATGGCGACGGGCGATGTGGCCGGCGGCGAATCGGCGGCGGTGGCGGAGGAGCGGGACTGGTCGGAGATGACCCCGGTGTGCCTGGCGGAGGCGTTCTCGCGGCTGGGCCTGGAGGACGTGTGGCGCGGCGCCATGGCGTGCTGCCGCGCGTNGCGGGACG-CGCCGCCTCCCGCCCGGC-GCTCTTCGCCGCGCTCGACCTCGAG-CCGCCTTCGCGTCCGTCGGCGCCGACG-CGCCGAGTTGTGGACGCCCGCCTTCCANCGCCGCGTCGACGNCATGCTCCGGTCCGCCTCCTCGCTCGNCGC-GGGGGAACTCAAGGAAGTCCNCGTTCGGGAATGCTCCGACGACGCCCTCGCCTTCGCCTCCGAAAGGTACAAACGTGTAAAATTTTATATGTTTTCTTCTTTTTTTTTTCTGGAAGTGATGTTTTGTTCGAAGTTATTAGAGACGCATGAAGCTTTTTGTTGATTAATTAGAAGTTCAAATTTCGTGTGATATGATACCTAATTGCATATGTAGTTTCTCACAATTTCCCCGTCACAGAGGCCTCCTGGAAATGTTTTTTTTCTCTAATTTCTCTTTGCTGACCAAGAAATATGCACATACCAAGCAATGGTCTTCATCTTCTTAGACGGTGGCTGAGCTAGAAAGATTTTTGAGTCCGGGAAAACTTCAATATAACTAGTATTTGTTATAGAAATTTCATCATCAATATTAAAATTTAATGGAGTTTTTGCCGGCGAGCCCGAGGCCGCCTGGGCAAGCCGGGTGGTGTCTCTGCCCCTGTTCTTAGACCTTCGAGATCGAATATAATGATGCGCATATTTGCGTTCTGTATAATGGTTGTATGCGCAATTTACCACTGTTCCTTTCTCAATTACGATGCAGTTTTATTTGTGCGCCTTAATGCCTTGAATTTATACAAGTTACTGATAGTTTTTTTTTATGTAGTATGCATTCATTCATAATTCTTCTTGGTCCTTAGATCTATATTCTCTGGGCTTTCAGGTTGTAAAATGTGTTCATGACACTGGAGGGTGTTGGTGACTTTTTTTTCTCTATTTAGCATTTATTCCCAACTCTGCAGAATATAATATATTTTAAACTACATATTCCGTTCTTAATGATAAGTTATGGTTTTCTTATTTGAACTAATATATTGACTGATGCTTGATTTTTCATTGATATATTTTATAGTGTGTAGGAATAGATATATGGGGCCTATAGTCTAACTATGGAGCCAAAAATATGTGGGAATCTGTACTAAAGGTCATAATTCCATTCTTAAGTCGAATGTTGGTGATGTTATTTTATTCAGGAAGAAAAGTCTTAGAAAAACCTCTCAAATTTCTATATTCCTCCAGGGAACCAACAGCTCTATTTGTTGTAGGTTTTGCCGTGTTGGTGATCTAGATTTTATTTTTTTTATTAAACTGACTGCATCACAATCAAGGGAAACTAGGTGCTGTTTTGTACTCATGAATTTGCAAGAAAAGATTTTCATGTATTACATTTTGAGTGTAGTAGCCTGAAACTTTGCTTCTTTTCAGCAATGAAGTTCTCTAGAAACTCATACTCTTGTACTTATTTAAACACAACTATTTCAAGAAGTAAAATACGTCTGTTCCTGTCTTCCTGCTAATATATTACCAAAATTCATAATACATGGAGAACCAACCATCCATATAGTTTTTACAGGTTCATCTTGAACGTTTGTCTGCTTCTACACCATTCTAAGTAAAATAGCTTTCTCAATTCAACTATTCTGTAATTTTTTTTTCAATTTTTTGTATTGCTGTTTGTATAATTTTAATGTTTTTATTGCATATGTATCCATCATTCAGCCTCTTATGTAAATGTATATTGGTGTTTCTGTGCATGTTAACCCAGTAAATTATTTGCCAACACTACAGTAATAGATACACTAAACTGAAATTGAGTTGGTGGTTGGTGTATTGCTCTTATTTGTCAAGCTTCTGTGGAAAATTATTTTGTGAAATATAGTAGTATTATGAAAATTATATTTAAATTGCTCGTGTCACATGCCCGCTCACGTTTTCTGTTATTTGGAAAATTGTAGTGTTATTGCCTTTGGTGAACATATGAGTGGACAACAGTGGAGGAAATGTGTTTGAGTGCAAGGGGTGATAAAGAGTAGTCTCACACTTACTCTCACTTACCCCCTTATGTGTCGTGGGAGCTATTCCCAGCCAATAGCAATGAGACTCTGACCTGACATAGAGTTAGGGATATCTTTTAACATAGTCGCTAACCTGAGCTCAATCAGCTTTTTAAGTTGGAGACTTGATGAGTCATGTTGAATGTGATCCCCAGGGATAAGTTGTTTGGTATGAACAAACCAACCCGATATGAGAAAACAAGTAACACAACTTATCTCCTAACACCTTTCTTTATGTTATTATCCAGAAATGTACCAAACCTGTGTCAGGTACCTACTCTACTTTGCACCTACATACATGTGGCTTCACAACACATACAAATGATCCAAAAACAAGCTTATAACAAAGAACATATTTGCTTGCAACTTCGTTTAAAGGAAAAAAAACATCATATAGCCAAACAGTTTTGTTTCCACCACAATACTAGACAGAACCTTACAGCAATACAGAGGCTCGGTGCCATCATCATTGAGTTGGAGCTCTTGCAGCTCAGCGTCACCCATTTTAGCAACTGAGCTGCAGCCGAATTGACAGTGCTGGTGACATACTGACATGTCACAAAATTCATCACCAGTGATCTTGGCGTGAGTTGTACAACCTCATTGCAAAGTAGTATAAAAGAGCATTCCATTTCTGCAGATAGTTTTAGGTTGGGTCCATTTCTATAAGTTATTTAGAGCAAAAGCTACATGCTATTTTGCTTTCTCTTCAGCTACATTTGACATGTCAATGAGATTGTAGGTGCCACTATTGACTTGCTTTATTCATATGCAGGTCTCCAAAGCTCAGCATTCTTTCCATTAGAAGCAGTCCAAGTGTAAGTGATCGATCAATGTTTATTGTTGCATCGAGCTGTCATATGCTTACTGAATTGGACATCAGCTACTGCCATGAGGTTTCGTACAAGTCACTGGAGATGATCGGTCAGAACTGCCGAAACCTCAATGTTCTCAAGCGGAACATATTCAATTGGCTCGATTCATCGGAGCATGTTGGCATAGTTCCTGATGATTATCTAAGAGATTGCCCCCAAGATGGTGACAGGGAAGCCATTGCAATTTCGAAGTTCATGCAAAATTTGAAGCATCTCGTAATTAGGTTCTCAAAGCTATCTGTTGTTGGCCTCAACGCAATATCAGGAGGATGCAAGGAATTGGAGGTTCTTGACTTGTATGGCTGCGCAAATTTGACA-CTCAGGGGTATACAACA-GGCTACTTCTAATATGAAGAACCTGAAGGAACTAGAGAATCCCAACTTTTACATTCCCAGGTCCTCCTTCCACATGGGTAGGTATGGGCACTGGCAGTTATACGATGAAAGGTTTCA-GACA--AATGTATTCCAGATATAAAA-ACAGCCTCAAGTTCAACGATCACCTCAGGTGTTTGTTCTCTGACATATGGCTTGTATTTATTAGTACTGTGAATGTTGTATTTGTGTTGTGTTGTGGAAAAATAATGACAATAATACCCTGTATAGTGCTGCTTTACTCATCTTTTCCATGTACCCATAAGAAAATTGTCATGCTTCAGTAATAATTTGTAAGGTCACCTACAATGATTCTTCAAAATTTCTTAGTATCAAATTTCTTAATAAAAAAAAGA]
[+] EMBL C91631 [GCCACTCGATATGGCGACGGGCGATGTGGCCGGCGGCGAATCGGCGGCGGTGGCGGAGGAGCGGGACTGGTCGGAGATGACCCCGGTGTGCCTGGCGGAGGCGTTCTCGCGGCTGGGCCTGGAGGACGTGTGGCGCGGCGCCATGGCGTGCTGCCGCGCGTNGCGGGACG CGCCGCCTCCCGCCCGGC GCTCTTCGCCGCGCTCGACCTCGAG CCGCCTTCGCGTCCGTCGGCGCCGACG CGCCGAGTTGTGGACGCCCGCCTTCCANCGCCGCGTCGACGNCATGCTCCGGTCCGCCTCCTCGCTCGNCGCGGGGGGAACTCAAGGAAGTCCNCGTTCGGGAA ]
[+] EMBL AK120307 [ TGGCGACGGGCGATGTGGCCGGCGGCGAATCGGCGGCGGTGGCGGAGGAGCGGGACTGGTCGGAGATGACCCCGGTGTGCCTGGCGGAGGCGTTCTCGCGGCTGGGCCTGGAGGACGTGTGGCGCGGCGCCATGGCGTGCTGCCGCGCGTGGCGGGACGCCGCCGCCTCCCGCCCGGCAGCTCTTCGCCGCGCTCGACCTCGAGCCCGCCTTCGCGTCCGTCGGCGCCGACGCCGCCGAGTGGTGGACGCCCGCCTTCCAGCGCCGCGTCGACGCCATGCTCCGGTCCGCCTCCTCGCTCGCCGC GGGGGAGCTCAGGGAGGTCCGCGTCCGGCACTGCTCCGACGACGCCCTCGCCTTCGCCTCCGAAAGGTACAAACGTGTAAAATTTTATATGTTTTCTTCTTTTTTTTTTCTGGAAGTGATGTTTTGTTCGAAGTTATTAGAGACGCATGAAGCTTTTTGTTGATTAATTAGAAGTTCAAATTTCGTGTGATATGATACCTAATTGCATATGTAGTTTCTCACAATTTCCCCGTCACAGAGGCCTCCTGGAAATGTTTTTTTTCTCTAATTTCTCTTTGCTGACCAAGAAATATGCACATACCAAGCAATGGTCTTCATCTTCTTAGACGGTGGCTGAGCTAGAAAGATTTTTGAGTCCGGGAAAACTTCAATATAACTAGTATTTGTTATAGAAATTTCATCATCAATATTAAAATTTAATGGAGTTTTTGCCGGCGAGCCCGAGGCCGCCTGGGCAAGCCGGGTGGTGTCTCTGCCCCTGTTCTTAGACCTTCGAGATCGAATATAATGATGCGCATATTTGCGTTCTGTATAATGGTTGTATGCGCAATTTACCACTGTTCCTTTCTCAATTACGATGCAGTTTTATTTGTGCGCCTTAATGCCTTGAATTTATACAAGTTACTGATAGTTTTTTTTTATGTAGTATGCATTCATTCATAATTCTTCTTGGTCCTTAGATCTATATTCTCTGGGCTTTCAGGTTGTAAAATGTGTTCATGACACTGGAGGGTGTTGGTGACTTTTTTTTCTCTATTTAGCATTTATTCCCAACTCTGCAGAATATAATATATTTTAAACTACATATTCCGTTCTTAATGATAAGTTATGGTTTTCTTATTTGAACTAATATATTGACTGATGCTTGATTTTTCATTGATATATTTTATAGTGTGTAGGAATAGATATATGGGGCCTATAGTCTAACTATGGAGCCAAAAATATGTGGGAATCTGTACTAAAGGTCATAATTCCATTCTTAAGTCGAATGTTGGTGATGTTATTTTATTCAGGAAGAAAAGTCTTAGAAAAACCTCTCAAATTTCTATATTCCTCCAGGGAACCAACAGCTCTATTTGTTGTAGGTTTTGCCGTGTTGGTGATCTAGATTTTATTTTTTTTATTAAACTGACTGCATCACAATCAAGGGAAACTAGGTGCTGTTTTGTACTCATGAATTTGCAAGAAAAGATTTTCATGTATTACATTTTGAGTGTAGTAGCCTGAAACTTTGCTTCTTTTCAGCAATGAAGTTCTCTAGAAACTCATACTCTTGTACTTATTTAAACACAACTATTTCAAGAAGTAAAATACGTCTGTTCCTGTCTTCCTGCTAATATATTACCAAAATTCATAATACATGGAGAACCAACCATCCATATAGTTTTTACAGGTTCATCTTGAACGTTTGTCTGCTTCTACACCATTCTAAGTAAAATAGCTTTCTCAATTCAACTATTCTGTAATTTTTTTTTCAATTTTTTGTATTGCTGTTTGTATAATTTTAATGTTTTTATTGCATATGTATCCATCATTCAGCCTCTTATGTAAATGTATATTGGTGTTTCTGTGCATGTTAACCCAGTAAATTATTTGCCAACACTACAGTAATAGATACACTAAACTGAAATTGAGTTGGTGGTTGGTGTATTGCTCTTATTTGTCAAGCTTCTGTGGAAAATTATTTTGTGAAATATAGTAGTATTATGAAAATTATATTTAAATTGCTCGTGTCACATGCCCGCTCACGTTTTCTGTTATTTGGAAAATTGTAGTGTTATTGCCTTTGGTGAACATATGAGTGGACAACAGTGGAGGAAATGTGTTTGAGTGCAAGGGGTGATAAAGAGTAGTCTCACACTTACTCTCACTTACCCCCTTATGTGTCGTGGGAGCTATTCCCAGCCAATAGCAATGAGACTCTGACCTGACATAGAGTTAGGGATATCTTTTAACATAGTCGCTAACCTGAGCTCAATCAGCTTTTTAAGTTGGAGACTTGATGAGTCATGTTGAATGTGATCCCCAGGGATAAGTTGTTTGGTATGAACAAACCAACCCGATATGAGAAAACAAGTAACACAACTTATCTCCTAACACCTTTCTTTATGTTATTATCCAGAAATGTACCAAACCTGTGTCAGGTACCTACTCTACTTTGCACCTACATACATGTGGCTTCACAACACATACAAATGATCCAAAAACAAGCTTATAACAAAGAACATATTTGCTTGCAACTTCGTTTAAAGGAAAAAAAACATCATATAGCCAAACAGTTTTGTTTCCACCACAATACTAGACAGAACCTTACAGCAATACAGAGGCTCGGTGCCATCATCATTGAGTTGGAGCTCTTGCAGCTCAGCGTCACCCATTTTAGCAACTGAGCTGCAGCCGAATTGACAGTGCTGGTGACATACTGACATGTCACAAAATTCATCACCAGTGATCTTGGCGTGAGTTGTACAACCTCATTGCAAAGTAGTATAAAAGAGCATTCCATTTCTGCAGATAGTTTTAGGTTGGGTCCATTTCTATAAGTTATTTAGAGCAAAAGCTACATGCTATTTTGCTTTCTCTTCAGCTACATTTGACATGTCAATGAGATTGTAGGTGCCACTATTGACTTGCTTTATTCATATGCAGGTCTCCAAAGCTCAGCATTCTTTCCATTAGAAGCAGTCCAAGTGTAAGTGATCGATCAATGTTTATTGTTGCATCGAGCTGTCATATGCTTACTGAATTGGACATCAGCTACTGCCATGAGGTTTCGTACAAGTCACTGGAGATGATCGGTCAGAACTGCCGAAACCTCAATGTTCTCAAGCGGAACATATTCAATTGGCTCGATTCATCGGAGCATGTTGGCATAGTTCCTGATGATTATCTAAGAGATTGCCCCCAAGATGGTGACAGGGAAGCCATTGCAATTTCGAAGTTCATGCAAAATTTGAAGCATCTCGTAATTAGGTTCTCAAAGCTATCTGTTGTTGGCCTCAACGCAATATCAGGAGGATGCAAGGAATTGGAGGTTCTTGACTTGTATGGCTGCGCAAATTTGACA CTCAGGGGTATACAACA GGCTACTTCTAATATGAAGAACCTGAAGGAACTAGAGAATCCCAACTTTTACATTCCCAGGTCCTCCTTCCACATGGGTAGGTATGGGCACTGGCAGTTATACGATGAAAGGTTTCA GACA AATGTATTCCAGATATAAAA ACAGCCTCAAGTTCAACGATCACCTCAGGTGTTTGTTCTCTGACATATGGCTTGTATTTATTAGTACTGTGAATGTTGTATTTGTGTTGTGTTGTGGAAAAATAATGACAATAATACCCTGTATAGTGCTGCTTTACTCATCTTTTCCATGTACCCATAAGAAAATTGTCATGCTTCAGTAATAATTTGT ]
[-] EMBL CB681816 [ ATTCTTTCCATTAGAAGCAGCCCAAGTGTAAGTGATCGATCAATGTTTATTGTTGCATCGAGCTGTCATATGCTTACTGAATTGGACATCAGCTACTGCCATGAGGTTTCATACAAGTCACTGGAGATGATCGGTCAGAACTGCCGAAACCTCAATGTTCTCAAGCGGAACATATTCAATTGGCTCGATTCATCGGAGCATGTTGGCATAGTTCCTGATGATTATCTAAGAGATTGCCCCCAAGATGGTGACAGGGAAGCCATTGCAATTTCGAAGTTCATGCAAAATTTGAAGCATCTCGTAATTAGGTTCTCAAAGCTATCTGTTGTTGGCCTCAACGCAATATCAGGAGGATGCAAGGAATTGGAGGTTCTTGACTTGTATGGCTGCGCAAATTTGACA CTCAGGGGTATACAACA GGCTACTTCTAATATGAAGAACCTGAAGGAACTAGAGAATCCCAACTTTTACATTCCCAGGTCCTCCTTCCACATGGGTAGGTATGGGCACTGGCAGTTATACGATGAAAGGTTTCA GACA AATGTATTCCAGATATAAAA ACAGCCTCAAGTTCAACGATCACCTCAGGTGTTTGTTCTCTGACATATGGCTTGTATTTATTAGTACTGTGAATGTTGTATTTGTGTTGTGTTGTGGAAAAATAATGACAATAATACCCTGTATAGTGCTGCTTTACTCATCTTTTCCATGTACCCATAAGAAAATTGTCATGCTTCAGTAATAATTTGTAAGGTCACCTACAATGATTGTTCAAAATTTCTTAGTATCAAATTTCTTAATAAAAAAAAGA]
[+] EMBL BM419406 [ CGTAATTAGGTTCTCAAAGCTATCTGTTGTTGGCCTCAACGCAATATCAGGAGGATGCAAGGAATTGGAGGTTCTTGACTTGTATGGCTGCGCAAATTTGACACCTCAGGGGAATACAACA GGCTACTTCTAATATGAAGAACCTGAAGGAACTAGAGAAGCCCCACTTTTACATTCCCAGGTCCTCCTTCCACATGGGTAGGTATGGGCACTGGCAGTTATACGATGAAAGGTTTCA GAC AATGTATTCCAGATATAAAA ACAGCCTCAAGTTCAACGATCACCTCAGGTGTTTGTTCTCTGACATATGGCTTGTATTTATTAGTACTGTGAATGTTGTATTTGTGTTGTGTTGTGGAAAAATAATGACAATAATACCCTGTATAGTGCTGCTTTACTCATCTTTTCCATGTACCCATAAGAAAATTGTCATGCTTCAGTAATAATTTGTAAGGTCACCTAC ATGATTCTTC AAATTTCTTAGTAAAAAAaaaa ]
[+] EMBL BI812641 [ CTTGACTTGTAT GCTGC CAAATTTGACA CTCAGGGGAATACAACACGGCTACTTCTAATATGAAGAACCTGAAGGAACTAGAGAAGCCCAACTTTTACATTCCCAGGTCCTCCTTCCACATGGGTAGGTAT GGCACT GCAGTTATACGATGAAAGGTTTCACGACAACAATGTATTCCAGATATAAAACACAGCCTCAAGTTCAACGATCACCTCAGGTGTTTGTTCTCTGACATATGGCTTGTATTTATTAGTACTGTGAATGTTGTATTTGTGTTGTGTTGTGGAAAAATAATGACCATAATACCCTGTATAGTGCTGCTTTAaaaaaaaaa ]
[+] EMBL AU029589 [ ACTTTTACA TCCCCGGCCCTCNTCCCACATGGGTAGGTATGGGCA TGGCAGTTATNCGATG AAGGTTTCA GAC AATGTATTCCAGATATAAAA ACAGCCTCAAGTTCAACGATCACCTCAGGTGTTTGTTCTCTGACATATGGCTTGTATTTATTAGTACTGTGAATGTTGTATTTGTGTTGTGTTGTGGAAAAATAATGACAATAATACCCTGTATAGTGCTGCTTTACTCATCTTTTCCATGTACCCATAAGAAAATTGTCATGCTTCAGTAATAATTTGTAAGGTCACCTACAATGATTCTTCAAAATTTCTTAGTATCAAATTTCTTAATAAAAAAAAaa]
consensusID : consensus_10121#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 720 fasta sequence
[AGAAAACCCTAGCCTAGCCTAGCCACTCGATATGGCGACGGGCGATGTGGCCGGCGGCGAATCGGCGGCGGTGGCGGAGGAGCGGGACTGGTCGGAGATGACCCCGGTGTGCCTGGCGGAGGCGTTCTCGCGGCTGGGCCTGGAGGACGTGTGGCGCGGCGCCATGGCGTGCTGCCGCGCGTGGCGGGACGCCGCCGCCTCCCGCCCGGCGCTCTTCGCCGCGCTCGACCTCGAGCCCGCCTTCGCGTCCGTCGGCGCCGACGCCGCCGAGTGGTGGACGCCCGCCTTCCAGCGCCGCGTCGACGCCATGCTCCGGTCCGCCTCCTCGCTCGCCGCGGGGGAGCTCAGGGAGGTCCGCGTCCGGCACTGCTCCGACGACGCCCTCGCCTTCGCCGCCGAAAGGTCTCCAAAGCTCAGCATTCTTTCCATTAGAAGCAGCCCAAGTGTAAGTGATCGATCAATGTTTATTGTTGCATCGAGCTGTCATATGCTTACTGAATTGGACATCAGCTACTGCCATGAGGTTTCATACAAGTCACTGGAGATGATCGGTCAGAACTGCCGAAACCTCAATGTTCTCAAGCGGAACATATTCAATTGGCTCGATTCATCGGAGCATGTTGGCATAGTTCCTGATGATTATCTAAGAGATTGCCCCCAAGATGGTGACAGGGAAGCCATTGCAATTTCGAAGTTCATGCAAAATTTGAAGCATCTCGT]
[+] EMBL CB681815 [AGAAAACCCTAGCCTAGCCTAGCCACTCGATATGGCGACGGGCGATGTGGCCGGCGGCGAATCGGCGGCGGTGGCGGAGGAGCGGGACTGGTCGGAGATGACCCCGGTGTGCCTGGCGGAGGCGTTCTCGCGGCTGGGCCTGGAGGACGTGTGGCGCGGCGCCATGGCGTGCTGCCGCGCGTGGCGGGACGCCGCCGCCTCCCGCCCGGCGCTCTTCGCCGCGCTCGACCTCGAGCCCGCCTTCGCGTCCGTCGGCGCCGACGCCGCCGAGTGGTGGACGCCCGCCTTCCAGCGCCGCGTCGACGCCATGCTCCGGTCCGCCTCCTCGCTCGCCGCGGGGGAGCTCAGGGAGGTCCGCGTCCGGCACTGCTCCGACGACGCCCTCGCCTTCGCCGCCGAAAGGTCTCCAAAGCTCAGCATTCTTTCCATTAGAAGCAGCCCAAGTGTAAGTGATCGATCAATGTTTATTGTTGCATCGAGCTGTCATATGCTTACTGAATTGGACATCAGCTACTGCCATGAGGTTTCATACAAGTCACTGGAGATGATCGGTCAGAACTGCCGAAACCTCAATGTTCTCAAGCGGAACATATTCAATTGGCTCGATTCATCGGAGCATGTTGGCATAGTTCCTGATGATTATCTAAGAGATTGCCCCCAAGATGGTGACAGGGAAGCCATTGCAATTTCGAAGTTCATGCAAAATTTGAAGCATCTCGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10121#0 ---------------------GCCACTCGATATGGCGACGGGCGATGTGGCCGGCGGCGA 39
consensus_10121#1 AGAAAACCCTAGCCTAGCCTAGCCACTCGATATGGCGACGGGCGATGTGGCCGGCGGCGA 60
***************************************
consensus_10121#0 ATCGGCGGCGGTGGCGGAGGAGCGGGACTGGTCGGAGATGACCCCGGTGTGCCTGGCGGA 99
consensus_10121#1 ATCGGCGGCGGTGGCGGAGGAGCGGGACTGGTCGGAGATGACCCCGGTGTGCCTGGCGGA 120
************************************************************
consensus_10121#0 GGCGTTCTCGCGGCTGGGCCTGGAGGACGTGTGGCGCGGCGCCATGGCGTGCTGCCGCGC 159
consensus_10121#1 GGCGTTCTCGCGGCTGGGCCTGGAGGACGTGTGGCGCGGCGCCATGGCGTGCTGCCGCGC 180
************************************************************
consensus_10121#0 GTNGCGGGACGC-GCCGCCTCCCGCCCGGCGCTCTTCGCCGCGCTCGACCTCGAGCC-GC 217
consensus_10121#1 GTGGCGGGACGCCGCCGCCTCCCGCCCGGCGCTCTTCGCCGCGCTCGACCTCGAGCCCGC 240
** ********* ******************************************** **
consensus_10121#0 CTTCGCGTCCGTCGGCGCCGACGC-GCCGAGTTGTGGACGCCCGCCTTCCANCGCCGCGT 276
consensus_10121#1 CTTCGCGTCCGTCGGCGCCGACGCCGCCGAGTGGTGGACGCCCGCCTTCCAGCGCCGCGT 300
************************ ******* ****************** ********
consensus_10121#0 CGACGNCATGCTCCGGTCCGCCTCCTCGCTCGNCGCGGGGGAACTCAAGGAAGTCCNCGT 336
consensus_10121#1 CGACGCCATGCTCCGGTCCGCCTCCTCGCTCGCCGCGGGGGAGCTCAGGGAGGTCCGCGT 360
***** ************************** ********* **** *** **** ***
consensus_10121#0 TCGGGAATGCTCCGACGACGCCCTCGCCTTCGCCTCCGAAAGGTACAAACGTGTAAAATT 396
consensus_10121#1 CCGGCACTGCTCCGACGACGCCCTCGCCTTCGCCGCCGAAAGGTC------TCCAAAGCT 414
*** * *************************** ********* * *** *
consensus_10121#0 TTATATGTTTTCTTCTTTTTTTTTTCTGGAAGTGATGTTTTGTTCGAAGTTATTAGAGAC 456
consensus_10121#1 CAGCATTCTTTCCATTAGAAGCAGCCCAAGTGTAAGTGATCGATCAATGT--TTATTGTT 472
** **** * * ** * * * ** * ** *** *
consensus_10121#0 GCATGAAGCTTTT---TGTTGATTAATTAGAAGTTCA---AATTTCGTGTGATATGATAC 510
consensus_10121#1 GCATCGAGCTGTCATATGCTTACTGAATTGGACATCAGCTACTGCCATGAGGTTTCATAC 532
**** **** * ** * * * * * * * *** * * * ** * * * ****
consensus_10121#0 CTAATTGCATATGTAGTTTCTCACAATTTCCCCG-TCACAGAGGCCTC---CTGGAAATG 566
consensus_10121#1 AAGTCACTGGAGATGATCGGTCAGAACTGCCGAAACCTCAATGTTCTCAAGCGGAACATA 592
* * * *** ** * ** * ** * *** * * * **
consensus_10121#0 TTTTTTTTCTCTAATTTCTCTTTGCTGACCAAGAAATATGCACATACCAAGCAATGGTCT 626
consensus_10121#1 TTCAATTGGCTCGATTCATCGGAGCATGTTGGCATAGTTCCTGATGATTATCTAAGAGAT 652
** ** *** ** ** * * * * ** * * * * *
consensus_10121#0 TCATCTTCTTAGACGGTGGCTG---AGCTAGAAAGATTTTTGAGTCCGGGAAAACTTCAA 683
consensus_10121#1 T--GCCCCCAAGATGGTGACAGGGAAGCCATTGCAATTTCGAAGTTCATGCAAAATTTGA 710
* * * *** **** * * *** * **** *** * * *** ** *
consensus_10121#0 TATAACTAGTATTTGTTATAGAAATTTCATCATCAATATTAAAATTTAATGGAGTTTTTG 743
consensus_10121#1 AGCATCTCGT-------------------------------------------------- 720
* ** **
consensus_10121#0 CCGGCGAGCCCGAGGCCGCCTGGGCAAGCCGGGTGGTGTCTCTGCCCCTGTTCTTAGACC 803
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 TTCGAGATCGAATATAATGATGCGCATATTTGCGTTCTGTATAATGGTTGTATGCGCAAT 863
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 TTACCACTGTTCCTTTCTCAATTACGATGCAGTTTTATTTGTGCGCCTTAATGCCTTGAA 923
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 TTTATACAAGTTACTGATAGTTTTTTTTTATGTAGTATGCATTCATTCATAATTCTTCTT 983
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 GGTCCTTAGATCTATATTCTCTGGGCTTTCAGGTTGTAAAATGTGTTCATGACACTGGAG 1043
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 GGTGTTGGTGACTTTTTTTTCTCTATTTAGCATTTATTCCCAACTCTGCAGAATATAATA 1103
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 TATTTTAAACTACATATTCCGTTCTTAATGATAAGTTATGGTTTTCTTATTTGAACTAAT 1163
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 ATATTGACTGATGCTTGATTTTTCATTGATATATTTTATAGTGTGTAGGAATAGATATAT 1223
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 GGGGCCTATAGTCTAACTATGGAGCCAAAAATATGTGGGAATCTGTACTAAAGGTCATAA 1283
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 TTCCATTCTTAAGTCGAATGTTGGTGATGTTATTTTATTCAGGAAGAAAAGTCTTAGAAA 1343
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 AACCTCTCAAATTTCTATATTCCTCCAGGGAACCAACAGCTCTATTTGTTGTAGGTTTTG 1403
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 CCGTGTTGGTGATCTAGATTTTATTTTTTTTATTAAACTGACTGCATCACAATCAAGGGA 1463
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 AACTAGGTGCTGTTTTGTACTCATGAATTTGCAAGAAAAGATTTTCATGTATTACATTTT 1523
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 GAGTGTAGTAGCCTGAAACTTTGCTTCTTTTCAGCAATGAAGTTCTCTAGAAACTCATAC 1583
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 TCTTGTACTTATTTAAACACAACTATTTCAAGAAGTAAAATACGTCTGTTCCTGTCTTCC 1643
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 TGCTAATATATTACCAAAATTCATAATACATGGAGAACCAACCATCCATATAGTTTTTAC 1703
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 AGGTTCATCTTGAACGTTTGTCTGCTTCTACACCATTCTAAGTAAAATAGCTTTCTCAAT 1763
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 TCAACTATTCTGTAATTTTTTTTTCAATTTTTTGTATTGCTGTTTGTATAATTTTAATGT 1823
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 TTTTATTGCATATGTATCCATCATTCAGCCTCTTATGTAAATGTATATTGGTGTTTCTGT 1883
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 GCATGTTAACCCAGTAAATTATTTGCCAACACTACAGTAATAGATACACTAAACTGAAAT 1943
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 TGAGTTGGTGGTTGGTGTATTGCTCTTATTTGTCAAGCTTCTGTGGAAAATTATTTTGTG 2003
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 AAATATAGTAGTATTATGAAAATTATATTTAAATTGCTCGTGTCACATGCCCGCTCACGT 2063
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 TTTCTGTTATTTGGAAAATTGTAGTGTTATTGCCTTTGGTGAACATATGAGTGGACAACA 2123
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 GTGGAGGAAATGTGTTTGAGTGCAAGGGGTGATAAAGAGTAGTCTCACACTTACTCTCAC 2183
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 TTACCCCCTTATGTGTCGTGGGAGCTATTCCCAGCCAATAGCAATGAGACTCTGACCTGA 2243
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 CATAGAGTTAGGGATATCTTTTAACATAGTCGCTAACCTGAGCTCAATCAGCTTTTTAAG 2303
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 TTGGAGACTTGATGAGTCATGTTGAATGTGATCCCCAGGGATAAGTTGTTTGGTATGAAC 2363
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 AAACCAACCCGATATGAGAAAACAAGTAACACAACTTATCTCCTAACACCTTTCTTTATG 2423
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 TTATTATCCAGAAATGTACCAAACCTGTGTCAGGTACCTACTCTACTTTGCACCTACATA 2483
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 CATGTGGCTTCACAACACATACAAATGATCCAAAAACAAGCTTATAACAAAGAACATATT 2543
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 TGCTTGCAACTTCGTTTAAAGGAAAAAAAACATCATATAGCCAAACAGTTTTGTTTCCAC 2603
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 CACAATACTAGACAGAACCTTACAGCAATACAGAGGCTCGGTGCCATCATCATTGAGTTG 2663
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 GAGCTCTTGCAGCTCAGCGTCACCCATTTTAGCAACTGAGCTGCAGCCGAATTGACAGTG 2723
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 CTGGTGACATACTGACATGTCACAAAATTCATCACCAGTGATCTTGGCGTGAGTTGTACA 2783
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 ACCTCATTGCAAAGTAGTATAAAAGAGCATTCCATTTCTGCAGATAGTTTTAGGTTGGGT 2843
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 CCATTTCTATAAGTTATTTAGAGCAAAAGCTACATGCTATTTTGCTTTCTCTTCAGCTAC 2903
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 ATTTGACATGTCAATGAGATTGTAGGTGCCACTATTGACTTGCTTTATTCATATGCAGGT 2963
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 CTCCAAAGCTCAGCATTCTTTCCATTAGAAGCAGTCCAAGTGTAAGTGATCGATCAATGT 3023
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 TTATTGTTGCATCGAGCTGTCATATGCTTACTGAATTGGACATCAGCTACTGCCATGAGG 3083
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 TTTCGTACAAGTCACTGGAGATGATCGGTCAGAACTGCCGAAACCTCAATGTTCTCAAGC 3143
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 GGAACATATTCAATTGGCTCGATTCATCGGAGCATGTTGGCATAGTTCCTGATGATTATC 3203
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 TAAGAGATTGCCCCCAAGATGGTGACAGGGAAGCCATTGCAATTTCGAAGTTCATGCAAA 3263
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 ATTTGAAGCATCTCGTAATTAGGTTCTCAAAGCTATCTGTTGTTGGCCTCAACGCAATAT 3323
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 CAGGAGGATGCAAGGAATTGGAGGTTCTTGACTTGTATGGCTGCGCAAATTTGACACTCA 3383
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 GGGGTATACAACAGGCTACTTCTAATATGAAGAACCTGAAGGAACTAGAGAATCCCAACT 3443
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 TTTACATTCCCAGGTCCTCCTTCCACATGGGTAGGTATGGGCACTGGCAGTTATACGATG 3503
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 AAAGGTTTCAGACAAATGTATTCCAGATATAAAAACAGCCTCAAGTTCAACGATCACCTC 3563
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 AGGTGTTTGTTCTCTGACATATGGCTTGTATTTATTAGTACTGTGAATGTTGTATTTGTG 3623
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 TTGTGTTGTGGAAAAATAATGACAATAATACCCTGTATAGTGCTGCTTTACTCATCTTTT 3683
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 CCATGTACCCATAAGAAAATTGTCATGCTTCAGTAATAATTTGTAAGGTCACCTACAATG 3743
consensus_10121#1 ------------------------------------------------------------
consensus_10121#0 ATTCTTCAAAATTTCTTAGTATCAAATTTCTTAATAAAAAAAAGA 3788
consensus_10121#1 ---------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||