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Oryza sativa
cluster # 10130 cluster # 10130       Sequences # 7       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10130#0 length = 1853 sequences # 6  
consensus_10130#1 length = 804 sequences # 1  

consensusID : consensus_10130#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1853
fasta sequence
                              [CATTTGTGAAGAAAAAAAAATAAAAAAAAAATAAAAATCCCCTTGCCCTATTCCCCACCCACCACCAGCTCGCCGCTCCTCGCCGCCGCCGCCGCGGGGCGTCATTCTCTCCGGTGCGCCGCCGCCGCGTCGGGCCCCGAAATCCGCCTCCCCCCACCACTGTTCTTCGAGAGAGGCCTCCCGTTAACTCGACGGCTGCGCCCGCCCAGTCGGAGATGAAGCAGGTGTCCTGTAGTGTTGTAAATAAATGTTTGGCCTACAATCCATGCCTCTCAAGAAACTACTATCAACGGTCTCATACCGTGAAGTTGCAAAGATCACAAGCTGGCCAGATAATTTTGCCTCGCAAATTGAGGAAATCTACGCTATGGCAGACCAACTTCACTCAGAGGCAGATTGCAACGCATTGTTCCTCTGACCTGAGTACCTCCTGCAGAGAAGAATTGCCCAGCTATTTAACAGTTAATGTTTTGAAAGATCAGTCATGTGCAAGACAAGGAATCTTTCGTAAAGTGATTGTCATCTTGAATCCTAATTCTGGATTTCGCAGCTCTCGTGAAGTTTTCTACCAGAAAGTACAACCAACATTGGAGCTTTCAGGCTTTATGATGCAAGTTGTTGAAACAGCGTATGCTGGTCATGCACATGCTCTTGCTTCTACTGTTGATCTCAGCACATGTCCTGATGGTATCATATGTGTTGGAGGTGATGGAATTGTGAATGAGGTTTTGAATGGTCTACTTGGTAGAGATGATTTGGAAGAGGCTATTCAACTGCCAATTGGGATAATTCCGGCTGGTTCTGAGAACTCGTTAGTGTGGACTGTTCTTGGTATCAGAGATCCTGTTTCCGCTGCAACTACTTTAGCCAAGGGTGGTATCACTCCAATAGACGTGTTCTCTGTCAAACGGACCCAAGCTGGAATTACTCATTTCGGTTTGACAGCTTCCTACTATGGTTTTGTGGCTGATGTTCTGCAACTATCTGAAAAATTCCGTCTGCACTTTGGCCCCTTCCGTTATGTCATCGCTGGTGTTCTTAAATTTCTATCATTACCTCAATACAGATTTGAGGTCAACTATCTCCCTTTGTCACCCAGGAGAAATCACAAATTACTACCTGTGACTGAAAAGTGTAATGATCATCTTGCTGCTGATAGCAGTGCTGAAGATAACTGGGTTACTAGGAAAGGAGAATTTCTTGGCATTTTTGTGTGCAATCATTTCTGCAAGCCTGCACAGGGATTACTCTCACCGGTTATCGCGCCAAAAGCTCAGCATAATGACGGCAGTCTAGACTTGATTCTTGTCCATGGAAGTGGAAGACTCAGATTATTCTGCTTCTTTATCGCCTATCAGTTTTGCTGGCATCTTCTTCTGCCTTATGTGGAATATGTCAAGGTAAAACATGTTAAGGTCAGGCCAATTGGCAAAACCCACAATGGGTGCGGTGTTGACGGAGAGCTTATTCTTGGAGAGGGCCAAACAGAATGGCAGTGCTCACTGCTCCCAGCACAAGGCAGATTGCTTGGCCGGCATCGCAGCGCATCTGAGTAGATTTCTAACCACCAAAGGTCCAAATTCAAGTGTCAAACTGAGGAACCACTTCAATGTATGAATTAAATTAAATCGGAGAAATTATGCATCAGAGAATGCTTCTTTCTACCATTATATTTCACTATTTTTTGAGAGGTTGTAAATGAGGGGAAATTATGGGTTTTGGGGAGCTTCTAACCCCCACCATTGGCCAATTGTATATTCTGAAATGAAAAAAAAAAGAAGAAAAATCTCTACTTCTGACTTTACATGGAAATAAAAAAGAAAATGTAANTTTTAAGCTTACACCAAGTCAAA]

[+] EMBL AK065015             [CATTTGTGAAGAAAAAAAAATAAAAAAAAAATAAAAATCCCCTTGCCCTATTCCCCACCCACCACCAGCTCGCCGCTCCTCGCCGCCTCCGCCGCGGGGCGTCATTCTCTCCGGTGCGCCGCCGCCGCGTCGGGCCCCGAAATCCGCCTCCCCCCACCACTGTTCTTCGAGAGAGGCCTCCCGTTAACTCGACGGCTGCGCCCGCCCAGTCGGAGATGAAGCAGGTGTCCTGTAGTGTTGTAAATAAATGTTTGGCCTACAATCCATGCCTCTCAAGAAACTACTATCAACGGTCTCATACCGTGAAGTTGCAAAGATCACAAGCTGGCCAGATAATTTTGCCTCGCAAATTGAGGAAATCTACGCTATGGCAGACCAACTTCACTCAGAGGCAGATTGCAACGCATTGTTCCTCTGACCTGAGTACCTCCTGCAGAGAAGAATTGCCCAGCTATTTAACAGTTAATGTTTTGAAAGATCAGTCATGTGCAAGACAAGGAATCTTTCGTAAAGTGATTGTCATCTTGAATCCTAATTCTGGATTTCGCAGCTCTCGTGAAGTTTTCTACCAGAAAGTACAACCAACATTGGAGCTTTCAGGCTTTATGATGCAAGTTGTTGAAACAGCGTATGCTGGTCATGCACATGCTCTTGCTTCTACTGTTGATCTCAGCACATGTCCTGATGGTATCATATGTGTTGGAGGTGATGGAATTGTGAATGAGGTTTTGAATGGTCTACTTGGTAGAGATGATTTGGAAGAGGCTATTCAACTGCCAATTGGGATAATTCCGGCTGGTTCTGAGAACTCGTTAGTGTGGACTGTTCTTGGTATCAGAGATCCTGTTTCCGCTGCAACTACTTTAGCCAAGGGTGGTATCACTCCAATAGACGTGTTCTCTGTCAAACGGACCCAAGCTGGAATTACTCATTTCGGTTTGACAGCTTCCTACTATGGTTTTGTGGCTGATGTTCTGCAACTATCTGAAAAATTCCGTCTGCACTTTGGCCCCTTCCGTTATGTCATCGCTGGTGTTCTTAAATTTCTATCATTACCTCAATACAGATTTGAGGTCAACTATCTCCCTTTGTCACCCAGGAGAAATCACAAATTACTACCTGTGACTGAAAAGTGTAATGATCATCTTGCTGCTGATAGCAGTGCTGAAGATAACTGGGTTACTAGGAAAGGAGAATTTCTTGGCATTTTTGTGTGCAATCATTTCTGCAAGCCTGCACAGGGATTACTCTCACCGGTTATCGCGCCAAAAGCTCAGCATAATGACGGCAGTCTAGACTTGATTCTTGTCCATGGAAGTGGAAGACTCAGATTATTCTGCTTCTTTATCGCCTATCAGTTTTGCTGGCATCTTCTTCTGCCTTATGTGGAATATGTCAAGGTAAAACATGTTAAGGTCAGGCCAATTGGCAAAACCCACAATGGGTGCGGTGTTGACGGAGAGCTTATTCTTGGGGAGGGCCAAACAGAATGGCAGTGCTCACTGCTCCCAGCACAAGGCAGATTGCTTGGCCGGCATCGCAGCGCATCTGAGTAGATTTCTAACCACCAAAGGTCCAAATTCAAGTGTCAAACTGAGGAACCACTTCAATGTATGAATTAAATTAAATCGGAGAAATTATGCATCAGAGAATGCTTCTTTCTACCATTATATTTCACTATTTTTTGAGAGGTTGTAAATGAGGGGAAATTATGGGTTTTGGGGAGCTTCTAACCCCCACCATTGGCCAATTGTATATTCTGAAATGAAAAAAAAAAGAAGAAAAATCTCTACTTCTGA                                                      ]
[+] EMBL CB666922             [                            AAATAAAAATCCCCTTGCCCTATTCCCCACCCACCACCAGCTCGCCGCTCCTCGCCGCCGCCGCCGCGGGGCGTCATTCTCTCCGGTGCGCCGCCGCCGCGTCGGGCCCCGAAATCCGCCTCCCCCCACCACTGTTCTTCGAGAGAGGCCTCCCGTTAACTCGACGGCTGCGCCCGCCCAGTCGGAGATGAAGCAGGTGTCCTGTAGTGTTGTAAATAAATGTTTGGCCTACAATCCATGCCTCTCAAGAAACTACTATCAACGGTCTCATACCGTGAAGTTGCAAAGATCACAAGCTGGCCAGATAATTTTGCCTCGCAAATTGAGGAAATCTACGCTATGGCAGACCAACTTCACTCAGAGGCAGATTGCAACGCATTGTTCCTCTGACCTGAGTACCTCCTGCAGAGAAGAATTGCCCAGCTATTTAACAGTTAATGTTTTGAAAGATCAGTCATGTGCAAGACAAGGAATCTTTCGTAAAGTGATTGTCATCTTGAATCCTAATTCTGGATTTCGCAGCTCTCGTGAAGTTTTCTACCAGAAAGTACAACCAACATTGG       AGGCTTTATGATGCAAGTTGTTGAAACAGCGTATGCTGGTCATGCACATGCTCTTGCTTCTACTGTTGATCTCAGCACATGTCCTGATGGTATCATATGTGTTGGAGGTGATGGAATTGTGAATGAGGTTTTGAATGGTCTACTTGGTAGAGATGATTTGGAAGAGGCTATTCAACTGCCAATTGGGATAATTCCGGCTGGTTCTGAGAACTCGTTAGTGTGGACTGTTCTTGGTATCAGAGATCCTGTTTCCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB683263             [                       aaaaccttTAAAAGTCCCCTTGCCCTATTCCCCACCCACCACCAGGTCGCCGCTCCTCGCCGCCGCCGCCGCGGGGCGTCATTCTCTCCGGTGCGCCGCCGCCGCGTCGGGCCCCGAAATCCGCCTCCCCCCACCACTGTTCTTCGAGAGAGGCCTCCCGTTAACTCGACGGCTGCGCCCGCCCAGTCGGAGATGAAGCAGGTGTCCTGTAATGTTGTAAATAAATGTTTGGCCTACAATCCATGCCTCTCAAGAAACTACTATCAACGGTCTCATACCGAGAAGTTGCAAAGATCACAAGCTGGCCAGATAATTTTGCCTCGCAAATTGAGGAAATCTACGCTATGGCAGACCAACTTCACTCAGAGGCAGATTGCAACGCATTGTTCCTCTGACCTGAGTACCTCCTGCAGAGAAGAATTGCCCAGCTATTTAACAGTTAATGTTTTGAAAGATCAGTCATGTGCAAGACAAGGAATCTTTCGTAAAGTGATTGTCGTCTTGAATCCTAATTCTGGATTTCGCAGCTCTCGTGAAGTTTTCTACCAGAAAGTACAACCAACATTGGAGCTTTCAGGCTTTATGATGCAAGTTGCTGAAACAGCGTATGCTGGTCATGCACATGCTCTTGCTTCTACTGATGATCTCAGCACATGTCCTGATGGTATCATATGTGTTGGAGGTGATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CA766393             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCACTCCAATAGATGTGTTCTCTGT NAACGGACCCAAGCTGGAATTACTCATTTCGGTTTGACAGCTTCCTACTATGGTTTTGTGGCTGATGTTCTGCAACTATCTGAAAAATTCCGCCTGCACTTTGGCCCCTTCCGTTATGTCATCGCTGGTGTTCTTAAATTTCTATCATTACCTCAATACAGATTTGAGGTCANCTATCTCCCTTTGTCACCCAGGAGAAATCACAAATTACTACTTGTGACTGAAAAGNGCNATGATCATCTTGCTGCTGATAGCAGTGCTGAAGATAACTGGGTTACTAGGAAAGGAGAATTTCTTGGCATTTTTGTGTGCAATCATTTCTGCAAGCCTGCACAGGGATTACTCTCACCGGTTATCGCGCCAAAAGCTCAGCATAATGACGGCAGTCTAGACTTGATTCTTGTCCATGGAAGTGGAAGACTCAGATTATTCTGCTTCTTTATCGCCTATCAGTTTTGCTGGCATCTTCTTCTGCCTTATGTGGAATATGTCAAGGTAAAACATGTTAAGGTCAGGCCAATTGGCAAAACCCACAAT                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB683717             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGGTCAACTATCTCCCTTTGTCACCCAGGAGAAATCACAAATTACTACCTGTGACTGAAAAGTGTAATGATCATCTTGCTGCTGATAGCAGTGCTGAAGATAACTGGGTTACTAGGAAAGGAGAATTTCTTGGCATTTTTGTGTGCAATCATTTCTGCAAGCCTGCACAGGGATTACTCTCACCGGTTATCGCGCCAAAAGCTCAGCATAATGACGGCAGTCTAGACTTGATTCTTGTCCATGGAAGTGGAAGACTCAGATTATTCTGCTTCTTTATCGCCTATCAGTTTTGCTGGCATCTTCTTCTGCCTTATGTGGAATATGTCAAGGTAAAACATGTTAAGGTCAGGCCAATTGGCAAAACCCACAATGGGTGCGGTGTTGACGGAGAGCTTATTCTTGGAGAGGGCCAAACAGAATGGCAGTGCTCACTGCTCCCAGCACAAGGCAGATTGCTTGGCCGGCATCGCAGCGCATTTGAGTAGATTTCTAACCACCAAAGGTCCAAATTCAAGTGTCAAACTGAGGAACCACTTCAATGTATGAATTAAATTAAATCGGAGAAATTATGCATCAGAGAATGCTTCTTTCTACCATTATATTTCACTATTTTTTGAGAGGTTGTAAATGAGGGGAAATTATGGGTTTTGGGGAGCTTCTAACCCCCACCATTGGCCAATTGTATATTCTGAAATGAAAAAAAAAAGGGGAAAAATCTCTACTTCTGACTTTACATGGAAATAAAAAAGA                                ]
[+] EMBL CB097008             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               aggggCATTTCTGCAAGCCTGCACAGGGATTACTCTCACCGGTTATCGCGCCAAAAGCTCAGCATAATGACGGCAGTCTAGACTTGATTCTTGTCCATGGAAGTGGAAGACTCAGATTATTCTGCTTCTTTATCGCCTATCAGTTTTGCTGGCATCTTCTTCTGCCTTATGTGGAATATGTCAAGGTAAAACATGTTAAGGTCAGGCCAATTGGCAAAACCCACAATGGGTGCGGTGTTGACGGAGAGCTTATTCTTGGAGAGGGCCAAACAGAATGGCAGTGCTCACTGCTCCCAGCACAAGGCAGATTGCTTGGCCGGCATCGCAGCGCATCTGAGTAGATTTCTAACCACCAAAGGTCCAAATTCAAGTGTCAAACTGAGGAACCACTTCAATGTATGAATTAAATTAAATCGGAGAAATTATGCATCAGAGAATGCTTCTTTCTACCGTTATATTTCACTATTTTTTGAGAGGTTGTAAATGAGGGGAAATTATGGGTTTTGGGGAGCTTCTAACCCCCACCATTGGCCAATTGTATATTCTGAAATGAAAAAAAAAAGAAG AAAATCTCTACTTCTGACTTTACATGGAAACACAGAAGCAAATGTAANTTTTAAGCTTACACCAAGTCAAA]


>consensus_10130#0 CATTTGTGAAGAAAAAAAAATAAAAAAAAAATAAAAATCCCCTTGCCCTATTCCCCACCC ACCACCAGCTCGCCGCTCCTCGCCGCCGCCGCCGCGGGGCGTCATTCTCTCCGGTGCGCC GCCGCCGCGTCGGGCCCCGAAATCCGCCTCCCCCCACCACTGTTCTTCGAGAGAGGCCTC CCGTTAACTCGACGGCTGCGCCCGCCCAGTCGGAGATGAAGCAGGTGTCCTGTAGTGTTG TAAATAAATGTTTGGCCTACAATCCATGCCTCTCAAGAAACTACTATCAACGGTCTCATA CCGTGAAGTTGCAAAGATCACAAGCTGGCCAGATAATTTTGCCTCGCAAATTGAGGAAAT CTACGCTATGGCAGACCAACTTCACTCAGAGGCAGATTGCAACGCATTGTTCCTCTGACC TGAGTACCTCCTGCAGAGAAGAATTGCCCAGCTATTTAACAGTTAATGTTTTGAAAGATC AGTCATGTGCAAGACAAGGAATCTTTCGTAAAGTGATTGTCATCTTGAATCCTAATTCTG GATTTCGCAGCTCTCGTGAAGTTTTCTACCAGAAAGTACAACCAACATTGGAGCTTTCAG GCTTTATGATGCAAGTTGTTGAAACAGCGTATGCTGGTCATGCACATGCTCTTGCTTCTA CTGTTGATCTCAGCACATGTCCTGATGGTATCATATGTGTTGGAGGTGATGGAATTGTGA ATGAGGTTTTGAATGGTCTACTTGGTAGAGATGATTTGGAAGAGGCTATTCAACTGCCAA TTGGGATAATTCCGGCTGGTTCTGAGAACTCGTTAGTGTGGACTGTTCTTGGTATCAGAG ATCCTGTTTCCGCTGCAACTACTTTAGCCAAGGGTGGTATCACTCCAATAGACGTGTTCT CTGTCAAACGGACCCAAGCTGGAATTACTCATTTCGGTTTGACAGCTTCCTACTATGGTT TTGTGGCTGATGTTCTGCAACTATCTGAAAAATTCCGTCTGCACTTTGGCCCCTTCCGTT ATGTCATCGCTGGTGTTCTTAAATTTCTATCATTACCTCAATACAGATTTGAGGTCAACT ATCTCCCTTTGTCACCCAGGAGAAATCACAAATTACTACCTGTGACTGAAAAGTGTAATG ATCATCTTGCTGCTGATAGCAGTGCTGAAGATAACTGGGTTACTAGGAAAGGAGAATTTC TTGGCATTTTTGTGTGCAATCATTTCTGCAAGCCTGCACAGGGATTACTCTCACCGGTTA TCGCGCCAAAAGCTCAGCATAATGACGGCAGTCTAGACTTGATTCTTGTCCATGGAAGTG GAAGACTCAGATTATTCTGCTTCTTTATCGCCTATCAGTTTTGCTGGCATCTTCTTCTGC CTTATGTGGAATATGTCAAGGTAAAACATGTTAAGGTCAGGCCAATTGGCAAAACCCACA ATGGGTGCGGTGTTGACGGAGAGCTTATTCTTGGAGAGGGCCAAACAGAATGGCAGTGCT CACTGCTCCCAGCACAAGGCAGATTGCTTGGCCGGCATCGCAGCGCATCTGAGTAGATTT CTAACCACCAAAGGTCCAAATTCAAGTGTCAAACTGAGGAACCACTTCAATGTATGAATT AAATTAAATCGGAGAAATTATGCATCAGAGAATGCTTCTTTCTACCATTATATTTCACTA TTTTTTGAGAGGTTGTAAATGAGGGGAAATTATGGGTTTTGGGGAGCTTCTAACCCCCAC CATTGGCCAATTGTATATTCTGAAATGAAAAAAAAAAGAAGAAAAATCTCTACTTCTGAC TTTACATGGAAATAAAAAAGAAAATGTAANTTTTAAGCTTACACCAAGTCAAA



consensusID : consensus_10130#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 804
fasta sequence
                              [CCCTTCCGTTATGTCATCGCTGGTGTTCTTAAATTTCTATCATTACCTCAATACAGATTTGAGGTCAACTATCTCCCTTTGTCACCCAGGAGAAATCACAAATTACTACCTGTGACTGAAAAGTGTAATGATCATCTTGCTGCTGATAGCAGTGCTGAAGATAACTGGGTTACTAGGAAAGGAGAATTTCTTGGCATTTTTGTGTGCAATCATTTCTGCAAGCCTGCACAGGGATTACTCTCACCGGTTATCGCGCCAAAAGCTCAGCATAATGACGGCAGTCTAGACTTGATTCTTGTCCATGGAAGTGGAAGACTCAGATTATTCTGCTTCTTTATCGCCTATCAGTTTTGCTGGCATCTTCTTCTGCCTTATGTGGAATATGTCAAGGTAAAACATGTTAAGGTCAGGCCAATTGGCAAAACCCACAATGGGTGCGGTGTTGACGGAGAGCTTATTCTTGGAGAGGGCCAAACAGAATGGCAGTGCTCACTGCTCCCAGCACAAGGCAGATTGCTTGGCCGGCATCGCAGCGCATTTGAGTAGATTTCTAACCACCAAAGGTCCAAATTCAAGTGTCAAACTGAGGAACCACTTCAATGTATGAATTAAATTAAATCGGAGAAATTATGCATCAGAGAATGCTTCTTTCTACCATTATATTTCACTATTTTTTGAGAGGTTGTAAATGAGGGGAAATTATGGGTTTTGGGGAGCTTCTAACCCCCACCATTGGCCAATTGTATATTCTGAAATAAAGGAAAAAAGAAGAAAAATCTCTACTTCTGACTTTCTTAAAGGAAA]

[-] EMBL CB666923             [CCCTTCCGTTATGTCATCGCTGGTGTTCTTAAATTTCTATCATTACCTCAATACAGATTTGAGGTCAACTATCTCCCTTTGTCACCCAGGAGAAATCACAAATTACTACCTGTGACTGAAAAGTGTAATGATCATCTTGCTGCTGATAGCAGTGCTGAAGATAACTGGGTTACTAGGAAAGGAGAATTTCTTGGCATTTTTGTGTGCAATCATTTCTGCAAGCCTGCACAGGGATTACTCTCACCGGTTATCGCGCCAAAAGCTCAGCATAATGACGGCAGTCTAGACTTGATTCTTGTCCATGGAAGTGGAAGACTCAGATTATTCTGCTTCTTTATCGCCTATCAGTTTTGCTGGCATCTTCTTCTGCCTTATGTGGAATATGTCAAGGTAAAACATGTTAAGGTCAGGCCAATTGGCAAAACCCACAATGGGTGCGGTGTTGACGGAGAGCTTATTCTTGGAGAGGGCCAAACAGAATGGCAGTGCTCACTGCTCCCAGCACAAGGCAGATTGCTTGGCCGGCATCGCAGCGCATTTGAGTAGATTTCTAACCACCAAAGGTCCAAATTCAAGTGTCAAACTGAGGAACCACTTCAATGTATGAATTAAATTAAATCGGAGAAATTATGCATCAGAGAATGCTTCTTTCTACCATTATATTTCACTATTTTTTGAGAGGTTGTAAATGAGGGGAAATTATGGGTTTTGGGGAGCTTCTAACCCCCACCATTGGCCAATTGTATATTCTGAAATAAAGGAAAAAAGAAGAAAAATCTCTACTTCTGACTTTCTTAAAGGAAA]


>consensus_10130#1 CCCTTCCGTTATGTCATCGCTGGTGTTCTTAAATTTCTATCATTACCTCAATACAGATTT GAGGTCAACTATCTCCCTTTGTCACCCAGGAGAAATCACAAATTACTACCTGTGACTGAA AAGTGTAATGATCATCTTGCTGCTGATAGCAGTGCTGAAGATAACTGGGTTACTAGGAAA GGAGAATTTCTTGGCATTTTTGTGTGCAATCATTTCTGCAAGCCTGCACAGGGATTACTC TCACCGGTTATCGCGCCAAAAGCTCAGCATAATGACGGCAGTCTAGACTTGATTCTTGTC CATGGAAGTGGAAGACTCAGATTATTCTGCTTCTTTATCGCCTATCAGTTTTGCTGGCAT CTTCTTCTGCCTTATGTGGAATATGTCAAGGTAAAACATGTTAAGGTCAGGCCAATTGGC AAAACCCACAATGGGTGCGGTGTTGACGGAGAGCTTATTCTTGGAGAGGGCCAAACAGAA TGGCAGTGCTCACTGCTCCCAGCACAAGGCAGATTGCTTGGCCGGCATCGCAGCGCATTT GAGTAGATTTCTAACCACCAAAGGTCCAAATTCAAGTGTCAAACTGAGGAACCACTTCAA TGTATGAATTAAATTAAATCGGAGAAATTATGCATCAGAGAATGCTTCTTTCTACCATTA TATTTCACTATTTTTTGAGAGGTTGTAAATGAGGGGAAATTATGGGTTTTGGGGAGCTTC TAACCCCCACCATTGGCCAATTGTATATTCTGAAATAAAGGAAAAAAGAAGAAAAATCTC TACTTCTGACTTTCTTAAAGGAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10130#0      CATTTGTGAAGAAAAAAAAATAAAAAAAAAATAAAAATCCCCTTGCCCTATTCCCCACCC 60
consensus_10130#1      ------------------------------------------------------------
                                                                                   

consensus_10130#0      ACCACCAGCTCGCCGCTCCTCGCCGCCGCCGCCGCGGGGCGTCATTCTCTCCGGTGCGCC 120
consensus_10130#1      ------------------------------------------------------------
                                                                                   

consensus_10130#0      GCCGCCGCGTCGGGCCCCGAAATCCGCCTCCCCCCACCACTGTTCTTCGAGAGAGGCCTC 180
consensus_10130#1      ------------------------------------------------------------
                                                                                   

consensus_10130#0      CCGTTAACTCGACGGCTGCGCCCGCCCAGTCGGAGATGAAGCAGGTGTCCTGTAGTGTTG 240
consensus_10130#1      ------------------------------------------------------------
                                                                                   

consensus_10130#0      TAAATAAATGTTTGGCCTACAATCCATGCCTCTCAAGAAACTACTATCAACGGTCTCATA 300
consensus_10130#1      ------------------------------------------------------------
                                                                                   

consensus_10130#0      CCGTGAAGTTGCAAAGATCACAAGCTGGCCAGATAATTTTGCCTCGCAAATTGAGGAAAT 360
consensus_10130#1      ------------------------------------------------------------
                                                                                   

consensus_10130#0      CTACGCTATGGCAGACCAACTTCACTCAGAGGCAGATTGCAACGCATTGTTCCTCTGACC 420
consensus_10130#1      ------------------------------------------------------------
                                                                                   

consensus_10130#0      TGAGTACCTCCTGCAGAGAAGAATTGCCCAGCTATTTAACAGTTAATGTTTTGAAAGATC 480
consensus_10130#1      ------------------------------------------------------------
                                                                                   

consensus_10130#0      AGTCATGTGCAAGACAAGGAATCTTTCGTAAAGTGATTGTCATCTTGAATCCTAATTCTG 540
consensus_10130#1      ------------------------------------------------------------
                                                                                   

consensus_10130#0      GATTTCGCAGCTCTCGTGAAGTTTTCTACCAGAAAGTACAACCAACATTGGAGCTTTCAG 600
consensus_10130#1      ------------------------------------------------------------
                                                                                   

consensus_10130#0      GCTTTATGATGCAAGTTGTTGAAACAGCGTATGCTGGTCATGCACATGCTCTTGCTTCTA 660
consensus_10130#1      ------------------------------------------------------------
                                                                                   

consensus_10130#0      CTGTTGATCTCAGCACATGTCCTGATGGTATCATATGTGTTGGAGGTGATGGAATTGTGA 720
consensus_10130#1      ------------------------------------------------------------
                                                                                   

consensus_10130#0      ATGAGGTTTTGAATGGTCTACTTGGTAGAGATGATTTGGAAGAGGCTATTCAACTGCCAA 780
consensus_10130#1      ------------------------------------------------------------
                                                                                   

consensus_10130#0      TTGGGATAATTCCGGCTGGTTCTGAGAACTCGTTAGTGTGGACTGTTCTTGGTATCAGAG 840
consensus_10130#1      ------------------------------------------------------------
                                                                                   

consensus_10130#0      ATCCTGTTTCCGCTGCAACTACTTTAGCCAAGGGTGGTATCACTCCAATAGACGTGTTCT 900
consensus_10130#1      ------------------------------------------------------------
                                                                                   

consensus_10130#0      CTGTCAAACGGACCCAAGCTGGAATTACTCATTTCGGTTTGACAGCTTCCTACTATGGTT 960
consensus_10130#1      ------------------------------------------------------------
                                                                                   

consensus_10130#0      TTGTGGCTGATGTTCTGCAACTATCTGAAAAATTCCGTCTGCACTTTGGCCCCTTCCGTT 1020
consensus_10130#1      --------------------------------------------------CCCTTCCGTT 10
                                                                         **********

consensus_10130#0      ATGTCATCGCTGGTGTTCTTAAATTTCTATCATTACCTCAATACAGATTTGAGGTCAACT 1080
consensus_10130#1      ATGTCATCGCTGGTGTTCTTAAATTTCTATCATTACCTCAATACAGATTTGAGGTCAACT 70
                       ************************************************************

consensus_10130#0      ATCTCCCTTTGTCACCCAGGAGAAATCACAAATTACTACCTGTGACTGAAAAGTGTAATG 1140
consensus_10130#1      ATCTCCCTTTGTCACCCAGGAGAAATCACAAATTACTACCTGTGACTGAAAAGTGTAATG 130
                       ************************************************************

consensus_10130#0      ATCATCTTGCTGCTGATAGCAGTGCTGAAGATAACTGGGTTACTAGGAAAGGAGAATTTC 1200
consensus_10130#1      ATCATCTTGCTGCTGATAGCAGTGCTGAAGATAACTGGGTTACTAGGAAAGGAGAATTTC 190
                       ************************************************************

consensus_10130#0      TTGGCATTTTTGTGTGCAATCATTTCTGCAAGCCTGCACAGGGATTACTCTCACCGGTTA 1260
consensus_10130#1      TTGGCATTTTTGTGTGCAATCATTTCTGCAAGCCTGCACAGGGATTACTCTCACCGGTTA 250
                       ************************************************************

consensus_10130#0      TCGCGCCAAAAGCTCAGCATAATGACGGCAGTCTAGACTTGATTCTTGTCCATGGAAGTG 1320
consensus_10130#1      TCGCGCCAAAAGCTCAGCATAATGACGGCAGTCTAGACTTGATTCTTGTCCATGGAAGTG 310
                       ************************************************************

consensus_10130#0      GAAGACTCAGATTATTCTGCTTCTTTATCGCCTATCAGTTTTGCTGGCATCTTCTTCTGC 1380
consensus_10130#1      GAAGACTCAGATTATTCTGCTTCTTTATCGCCTATCAGTTTTGCTGGCATCTTCTTCTGC 370
                       ************************************************************

consensus_10130#0      CTTATGTGGAATATGTCAAGGTAAAACATGTTAAGGTCAGGCCAATTGGCAAAACCCACA 1440
consensus_10130#1      CTTATGTGGAATATGTCAAGGTAAAACATGTTAAGGTCAGGCCAATTGGCAAAACCCACA 430
                       ************************************************************

consensus_10130#0      ATGGGTGCGGTGTTGACGGAGAGCTTATTCTTGGAGAGGGCCAAACAGAATGGCAGTGCT 1500
consensus_10130#1      ATGGGTGCGGTGTTGACGGAGAGCTTATTCTTGGAGAGGGCCAAACAGAATGGCAGTGCT 490
                       ************************************************************

consensus_10130#0      CACTGCTCCCAGCACAAGGCAGATTGCTTGGCCGGCATCGCAGCGCATCTGAGTAGATTT 1560
consensus_10130#1      CACTGCTCCCAGCACAAGGCAGATTGCTTGGCCGGCATCGCAGCGCATTTGAGTAGATTT 550
                       ************************************************ ***********

consensus_10130#0      CTAACCACCAAAGGTCCAAATTCAAGTGTCAAACTGAGGAACCACTTCAATGTATGAATT 1620
consensus_10130#1      CTAACCACCAAAGGTCCAAATTCAAGTGTCAAACTGAGGAACCACTTCAATGTATGAATT 610
                       ************************************************************

consensus_10130#0      AAATTAAATCGGAGAAATTATGCATCAGAGAATGCTTCTTTCTACCATTATATTTCACTA 1680
consensus_10130#1      AAATTAAATCGGAGAAATTATGCATCAGAGAATGCTTCTTTCTACCATTATATTTCACTA 670
                       ************************************************************

consensus_10130#0      TTTTTTGAGAGGTTGTAAATGAGGGGAAATTATGGGTTTTGGGGAGCTTCTAACCCCCAC 1740
consensus_10130#1      TTTTTTGAGAGGTTGTAAATGAGGGGAAATTATGGGTTTTGGGGAGCTTCTAACCCCCAC 730
                       ************************************************************

consensus_10130#0      CATTGGCCAATTGTATATTCTGAAATGAAAAAAAAAAGAAGAAAAATCTCTACTTCTGAC 1800
consensus_10130#1      CATTGGCCAATTGTATATTCTGAAATAAAGGAAAAAAGAAGAAAAATCTCTACTTCTGAC 790
                       ************************** **  *****************************

consensus_10130#0      TTTACATGGAAATAAAAAAGAAAATGTAANTTTTAAGCTTACACCAAGTCAAA 1853
consensus_10130#1      TTT-CTTAAAGGAAA-------------------------------------- 804
                       *** * *  *   **                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)