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Oryza sativa
cluster # 10144 cluster # 10144       Sequences # 7       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10144#0 length = 2290 sequences # 4  
consensus_10144#1 length = 992 sequences # 3  

consensusID : consensus_10144#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2290
fasta sequence
                              [CTGCTTATCCCCTCCTCCTCCCGGGTTCGCATTCCGTCGAACACCATGACGGCGGCGGCGGCGGCAGCGGCGGTGACCCTCCTCCGCCTCCCTCTCGCCCGACTCTCCTCCCACCTCCGCTCCCTCCCTCCCCGTCCCATACCGCCCCCTCGGCTCCGCGTCTACACCTCCCACCGCCTCCTCTCCTCCCTCCTAGCTCCCAGCCACGTCCCCGCCGTCTCGTCCCTGGCCGAGGCGGTGGCTGCGCCGGATGGTGAGGGGGTCGAAGTGGAGGAGGAGGAGGACGAGGAGGAGGAGGCAGAGGCGCGCCCCACCACCTTCGCGCTGCCGCGGCTGCCGCGGCCGAAGCTGAGCGTGAAGGAGCGGAAGGAGCTCGCGTCGTACGCGCACGGCCTCGGCAAGCGGCTCAAGTCGCAGCAGGTCGGCAAGGGCGGCGTCACGCCGTCCGTCGTCGCCGCCTTCAACGACAACCTCGAGTCCAACGAGCTCCTCAAGGTGCCTCTCCCGTTTCCCCATCCTCTCGCATTATAAATTCGTGACATGATACAACACATAGTTTACCTACAAATACAATGAGAACAAATACATCAATTTCAGTGTATGATATACCAATGGAAATGGGATGCTTCATCATGCTGCTGAATACTGATATACAATGATGTCATGTGATTTTGTTTAACTGGGAATTAGGATCACTGTAGGGTATATTCATCAATAGTTATTAAAGTTAACTAATGCTTTTTATGGTTCGAATCTGATTGTAGGAGTAGATAGGATGCTGAATTGCTGATAACCGCATGCTTTTGGTTTAGGTAGACATGCAATATTCAATTTAACCATGACTAGGTTGACCTTGAGTTTTCCTTATTATTGGCTTGTTCTCTTTCCACCTCGTTTTGACGGCCCTCATATTTCTTGTTAGGTAATGCAAAGGGTGGTTTACATGCTAGCTAATTCTGTGAAAAAAATGGTGATTGCTTTTTTCCAAACAAACAAACCAGCATGAGCTCATTATTACAGTACCTTATATGTTATACTAGTCACAGTACATGTTACAGATGTATTTTCCTCCTGTTTGTATTCCTTCCACACAATTGCGCTGGATACAGTCTTTAAACTTCTTAATTGGGTTGTTGTTTTGAACTTTACCCCCATGGCATATATTAGATATCCTTAACTTCTTTTGTTACTATAGGTCATATGCACGCCTCTTCAAATTGAGAAGTTTTCTGACTTCTAGGGTCTTAAGTGAGTAACAGGGATTTCAGGTTAAACTTGTTCTGATTGGTCTTGTGTTAGTATTTTTGGTTTGGCTGAGTTGCATAATTGTTGGGCTTTTTTCTGTTTGCATTTGGTGGTTTTAACCTATGGTCAGCCCTGCCACAAATCATATAGGTAACACAAAACCATTGTTCATTCGGAAGTCATTACAACCCACAGGCCTTTTTTTATTCAAAAGTCTCTCTTTCAAGAAGCAGCAAAATTTGTGTTATAGTGCAAGCAAGCGATCTGACTTCTAACCTCTGTGAATGCATATAGTTATTAAACCAAAATACTCAAGTTTTTCATAAATATGGAATTGACTTATACTGAATAAACTCCACATCTTTATTCTGGCCTAGCCAAGTTGTGACAGACAATTGTTCGAATTGAGAAGCTAAGTGCCTGTGTCCAACACTTAATTTGCACACAAATTTTCCAATAAGGCTGTGTTCCATGTGTGCCTGTGTTCCATTCTACGTATTTCGTATGTAAGAGAGCCAATAAGCCTGTAGGATTTAGTGTCTTGTGCCTTTTCTTGCTTTAGTGAGCCCTTTTGTTCGGCTTTCCTTTCTGTGATGTTAAGTTGTTCTTCAACATTCGGCATATGTTATGACAGCTAAAAATTCATTTGAACTGCCCTGGAGAGCTGCCTGACGTGATACTACAACTTGAGGAGTCAACCGGATCCATTGCTGTTGACCAAATTGGTCGATCTGTCATTCTATATCGTCCTAGCACCAGTAAGATGAAAAAGAGAGAAGAAAGTGCTAGGAATAGAACAAGATTTGTAAGATCTAGAGAACCATCAGAAGAACAACCTAGAAGCAGCACAAGCAAGAGATTTATAAAATCTGGAGGAGCATTTAGGCCACAACAGAAGAGAAGACCATTAGCATCTAAGGAATCGTCGTATGGGCGAAGATAGATGCCACATTCAATCCTTCATCTTGTTTTTTTTCATTGTCTAGACTTATGGAAATCATGTAAACTTTAGACCATCTAATTTGATAATAGATATTAGTGCTGA]

[+] EMBL AK067203             [CTGCTTATCCCCTCCTCCTCCCGGGTTCGCATTCCGTCGAACACCATGACGGCGGCGGCGGCGGCAGCGGCGGTGACCCTCCTCCGCCTCCCTCTCGCCCGACTCTCCTCCCACCTCCGCTCCCTCCCTCCCCGTCCCATACCGCCCCCTCGGCTCCGCGTCTACACCTCCCACCGCCTCCTCTCCTCCCTCCTAGCTCCCAGCCACGTCCCCGCCGTCTCGTCCCTGGCCGAGGCGGTGGCTGCGCCGGATGGTGAGGGGGTCGAAGTGGAGGAGGAGGAGGACGAGGAGGAGGAGGCAGAGGCGCGCCCCACCACCTTCGCGCTGCCGCGGCTGCCGCGGCCGAAGCTGAGCGTGAAGGAGCGGAAGGAGCTCGCGTCGTACGCGCACGGCCTCGGCAAGCGGCTCAAGTCGCAGCAGGTCGGCAAGGGCGGCGTCACGCCGTCCGTCGTCGCCGCCTTCAACGACAACCTCGAGTCCAACGAGCTCCTCAAGGTGCCTCTCCCGTTTCCCCATCCTCTCGCATTATAAATTCGTGACATGATACAACACATAGTTTACCTACAAATACAATGAGAACAAATACATCAATTTCAGTGTATGATATACCAATGGAAATGGGATGCTTCATCATGCTGCTGAATACTGATATACAATGATGTCATGTGATTTTGTTTAACTGGGAATTAGGATCACTGTAGGGTATATTCATCAATAGTTATTAAAGTTAACTAATGCTTTTTATGGTTCGAATCTGATTGTAGGAGTAGATAGGATGCTGAATTGCTGATAACCGCATGCTTTTGGTTTAGGTAGACATGCAATATTCAATTTAACCATGACTAGGTTGACCTTGAGTTTTCCTTATTATTGGCTTGTTCTCTTTCCACCTCGTTTTGACGGCCCTCATATTTCTTGTTAGGTAATGCAAAGGGTGGTTTACATGCTAGCTAATTCTGTGAAAAAAATGGTGATTGCTTTTTTCCAAACAAACAAACCAGCATGAGCTCATTATTACAGTACCTTATATGTTATACTAGTCACAGTACATGTTACAGATGTATTTTCCTCCTGTTTGTATTCCTTCCACACAATTGCGCTGGATACAGTCTTTAAACTTCTTAATTGGGTTGTTGTTTTGAACTTTACCCCCATGGCATATATTAGATATCCTTAACTTCTTTTGTTACTATAGGTCATATGCACGCCTCTTCAAATTGAGAAGTTTTCTGACTTCTAGGGTCTTAAGTGAGTAACAGGGATTTCAGGTTAAACTTGTTCTGATTGGTCTTGTGTTAGTATTTTTGGTTTGGCTGAGTTGCATAATTGTTGGGCTTTTTTCTGTTTGCATTTGGTGGTTTTAACCTATGGTCAGCCCTGCCACAAATCATATAGGTAACACAAAACCATTGTTCATTCGGAAGTCATTACAACCCACAGGCCTTTTTTTATTCAAAAGTCTCTCTTTCAAGAAGCAGCAAAATTTGTGTTATAGTGCAAGCAAGCGATCTGACTTCTAACCTCTGTGAATGCATATAGTTATTAAACCAAAATACTCAAGTTTTTCATAAATATGGAATTGACTTATACTGAATAAACTCCACATCTTTATTCTGGCCTAGCCAAGTTGTGACAGACAATTGTTCGAATTGAGAAGCTAAGTGCCTGTGTCCAACACTTAATTTGCACACAAATTTTCCAATAAGGCTGTGTTCCATGTGTGCCTGTGTTCCATTCTACGTATTTCGTATGTAAGAGAGCCAATAAGCCTGTAGGATTTAGTGTCTTGTGCCTTTTCTTGCTTTAGTGAGCCCTTTTGTTCGGCTTTCCTTTCTGTGATGTTAAGTTGTTCTTCAACATTCGGCATATGTTATGACAGCTAAAAATTCATTTGAACTGCCCTGGAGAGCTGCCTGACGTGATACTACAACTTGAGGAGTCAACCGGATCCATTGCTGTTGACCAAATTGGTCGATCTGTCATTCTATATCGTCCTAGCACCAGTAAGATGAAAAAGAGAGAAGAAAGTGCTAGGAATAGAACAAGATTTGTAAGATCTAGAGAACCATCAGAAGAACAACCTAGAAGCAGCACAAGCAAGAGATTTATAAAATCTGGAGGAGCATTTAGGCCACAACAGAAGAGAAGACCATTAGCATCTAAGGAATCGTCGTATGGGCGAAGATAGATGCCACATTCAATCCTTCATCTTGTTTTTTTTCATTGTCTAGACTTATGGAAATCATGTAAACTTTAGACCATCTAATTTGATAATAGATATTAGTGCTG ]
[+] EMBL CB620590             [                                       AACACTCTTAAGG GGCGGCGGCGGCAGCGGCGGTGACCCTCCTCCGCCTCCCTCTCGCCCGACTCTCCTCCCACCTCCGCTCCCTCCCTCCCCGTCCCATACCGCCCCCTCGGCTCCGCGTCTACACCTCCCACCGCCTCCTCTCCTCCCTCCTAGCTCCCAGCCACGTCCCCGCCGTCTCGTCCCTGGCCGAGGCGGTGGCTGCGCCGGATGGTGAGGGGGTCGAAGTGGAGGAG         GAGGAGGAGGAGGCAGAGGCGCGCCCCACCAACTTCGTGCTGCCGCGGCTGCCGCGGTCGAAGCTGAGCGTGAAGGAGCGGAAGGAGCTCGCGTCGTACGCGCACGGCCTCGGCAAGCGGCTCAAGTCGCAGCAGGTCGGCAAGGGCGGCGTCACGCCGTCCGTCGTCGCCGCCTTCAACGACAACCTCGAGTCCAACGAGCTCCTCAAGGTGCCTCTCCCGTTTCCCCATCCTCTCGCATTATAAATTCGTGACATGATACAACACATAGTTTACCTACAAATACAATGAGAACAAATACATCAATTTCAGTGTATGATATACCAATGGAAATGGGATGCTTCATCATGCTGCTGAATACTGATATACAATGATGTCATGTGATTTTGTTTAACTGGGAATTAGGATCACTGTAGGGTATATTCATCAATAGTTATTAAAGTTAACTAATGCTTTTTATGGGTCGAATCTGATTGTAGGAGTAGATAGGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CB620591             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GATCTGACTTCTAACCTCTGTGAATGCATATAGTTATTAAACCAAAATACTCAAGTTTTTCATAAATATGGAATTGACTTATACTGAATAAACTCCACATCTTTATTCTGGCCTAGCCAAGTTGTGACAGACAATTGTTTGAATTGAGAAGCTAAGTGCCTGTGTCCAACACTTAATTTGCACACAAATTTTCCAATAAGGCTGTGTTCCATGTGTGCCTGTGTTCCATTCTACGTATTTCGTATGTAAGAGAGCCAATAAGCCTGTAGGATTTAGTGTCTTGTGCCTTTTCTTGCTTTAGTGAGCCCTTTTGTTCGGCTTTCCTTTCTGTGATGTTAAGTTGTTCTTCAACATTCGGCATATGTTATGACAGCTAAAAATTCATTTGAACTGCCCTGGAGAGCTGCCTGACGTGATACTACAACTTGAGGAGTCAACCGGATCCATTGCTGTTGACCAAATTGGTCGATCTGTCATTCTATATCGTCCTAGCACCAGTAAGATGAAAAAGAGAGAAGAAAGTGCTAGGAATAGAACAAGATTTGTAAGATCTAGAGAACCATCAGAAGAACAACCTAGAAGCAGCACAAGCAAGAGATTTATAAAATCTGGAGGAGCATTTAGGCCACAACAGAAGAGAAGACCATTAGCATCTAAGGAATCGTCGTATGGGCGAAGATAGATGCCACATTCAATCCTTCATCTTGTTTTTTTCCATTGTCTAGACTTGTGGAAATCATGTAAACTTTAGACCATCTAATTTGATAATAGATATTAGTGCTGA]
[+] EMBL CB681680             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ACAACTTGAGGAGTCAACCGGATCCATTGCTGTTGACCAAATTGGTCGATCTGTCATTCTATATCGTCCTAGCACCAGTAAGATGAAAAAGAGAGAAGAAAGTGCTAGGAATAGAACAAGATTTGTAAGATCTAGAGAACCATCAGAAGAACAACCTAGAAGCAGCACAAGCAAGAGATTTATAAAATCTGGAGGAGCATTTAGGCCACAACAGAAGAGAAGACCATTAGCATCTAAGGAATCGTCGTATAGGCGAAGATAGATGCCACATTCAATCCTTCATCTTGTTTTTTTTCATTGTCTAGACTTATGGAAATCATGTAAACTTTAGACCATCTAATTTGATAATAGATATTAGTGCTG ]


>consensus_10144#0 CTGCTTATCCCCTCCTCCTCCCGGGTTCGCATTCCGTCGAACACCATGACGGCGGCGGCG GCGGCAGCGGCGGTGACCCTCCTCCGCCTCCCTCTCGCCCGACTCTCCTCCCACCTCCGC TCCCTCCCTCCCCGTCCCATACCGCCCCCTCGGCTCCGCGTCTACACCTCCCACCGCCTC CTCTCCTCCCTCCTAGCTCCCAGCCACGTCCCCGCCGTCTCGTCCCTGGCCGAGGCGGTG GCTGCGCCGGATGGTGAGGGGGTCGAAGTGGAGGAGGAGGAGGACGAGGAGGAGGAGGCA GAGGCGCGCCCCACCACCTTCGCGCTGCCGCGGCTGCCGCGGCCGAAGCTGAGCGTGAAG GAGCGGAAGGAGCTCGCGTCGTACGCGCACGGCCTCGGCAAGCGGCTCAAGTCGCAGCAG GTCGGCAAGGGCGGCGTCACGCCGTCCGTCGTCGCCGCCTTCAACGACAACCTCGAGTCC AACGAGCTCCTCAAGGTGCCTCTCCCGTTTCCCCATCCTCTCGCATTATAAATTCGTGAC ATGATACAACACATAGTTTACCTACAAATACAATGAGAACAAATACATCAATTTCAGTGT ATGATATACCAATGGAAATGGGATGCTTCATCATGCTGCTGAATACTGATATACAATGAT GTCATGTGATTTTGTTTAACTGGGAATTAGGATCACTGTAGGGTATATTCATCAATAGTT ATTAAAGTTAACTAATGCTTTTTATGGTTCGAATCTGATTGTAGGAGTAGATAGGATGCT GAATTGCTGATAACCGCATGCTTTTGGTTTAGGTAGACATGCAATATTCAATTTAACCAT GACTAGGTTGACCTTGAGTTTTCCTTATTATTGGCTTGTTCTCTTTCCACCTCGTTTTGA CGGCCCTCATATTTCTTGTTAGGTAATGCAAAGGGTGGTTTACATGCTAGCTAATTCTGT GAAAAAAATGGTGATTGCTTTTTTCCAAACAAACAAACCAGCATGAGCTCATTATTACAG TACCTTATATGTTATACTAGTCACAGTACATGTTACAGATGTATTTTCCTCCTGTTTGTA TTCCTTCCACACAATTGCGCTGGATACAGTCTTTAAACTTCTTAATTGGGTTGTTGTTTT GAACTTTACCCCCATGGCATATATTAGATATCCTTAACTTCTTTTGTTACTATAGGTCAT ATGCACGCCTCTTCAAATTGAGAAGTTTTCTGACTTCTAGGGTCTTAAGTGAGTAACAGG GATTTCAGGTTAAACTTGTTCTGATTGGTCTTGTGTTAGTATTTTTGGTTTGGCTGAGTT GCATAATTGTTGGGCTTTTTTCTGTTTGCATTTGGTGGTTTTAACCTATGGTCAGCCCTG CCACAAATCATATAGGTAACACAAAACCATTGTTCATTCGGAAGTCATTACAACCCACAG GCCTTTTTTTATTCAAAAGTCTCTCTTTCAAGAAGCAGCAAAATTTGTGTTATAGTGCAA GCAAGCGATCTGACTTCTAACCTCTGTGAATGCATATAGTTATTAAACCAAAATACTCAA GTTTTTCATAAATATGGAATTGACTTATACTGAATAAACTCCACATCTTTATTCTGGCCT AGCCAAGTTGTGACAGACAATTGTTCGAATTGAGAAGCTAAGTGCCTGTGTCCAACACTT AATTTGCACACAAATTTTCCAATAAGGCTGTGTTCCATGTGTGCCTGTGTTCCATTCTAC GTATTTCGTATGTAAGAGAGCCAATAAGCCTGTAGGATTTAGTGTCTTGTGCCTTTTCTT GCTTTAGTGAGCCCTTTTGTTCGGCTTTCCTTTCTGTGATGTTAAGTTGTTCTTCAACAT TCGGCATATGTTATGACAGCTAAAAATTCATTTGAACTGCCCTGGAGAGCTGCCTGACGT GATACTACAACTTGAGGAGTCAACCGGATCCATTGCTGTTGACCAAATTGGTCGATCTGT CATTCTATATCGTCCTAGCACCAGTAAGATGAAAAAGAGAGAAGAAAGTGCTAGGAATAG AACAAGATTTGTAAGATCTAGAGAACCATCAGAAGAACAACCTAGAAGCAGCACAAGCAA GAGATTTATAAAATCTGGAGGAGCATTTAGGCCACAACAGAAGAGAAGACCATTAGCATC TAAGGAATCGTCGTATGGGCGAAGATAGATGCCACATTCAATCCTTCATCTTGTTTTTTT TCATTGTCTAGACTTATGGAAATCATGTAAACTTTAGACCATCTAATTTGATAATAGATA TTAGTGCTGA



consensusID : consensus_10144#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 992
fasta sequence
                              [GCCGCTGCTGTCCCCTGCTTATCCCCTCCTCCTCCCGGGTTCGCATTCCGTCGAACACCATGACGGCGGCGGCGGCGGCAGCGGCGGTGACCCTCCTCCGCCTCCCTCTCGCCCGACTCTCCTCCCACCTCCGCTCCCTCCCTCCCCGTCCCATACCGCCCCCTCGGCTCCGCGTCTACACCTCCCACCGCCTCCTCTCCTCCCTCCTAGCTCCCAGCCACGTCCCCGCCGTCTCGTCCCTGGCCGAGGCGGTGGCTGCGCCGGATGGTGAGGGGGTCGAAGTGGAGGAGGAGGAGGACGAGGAGGAGGAGGCAGAGGCGCGCCCCACCACCTTCGTGCTGCCGCGGCTGCCGCGGCCGAAGCTGAGCGTGAAGGAGCGGAAGGAGCTCGCGTCGTACGCGCACGGCCTCGGCAAGCGGCTCAAGTCGCAGCAGGTCGGCAAGGGCGGCGTCACGCCGTCCGTCGTCGCCGCCTTCAACGACAACCTCGAGTCCAAC-GAGCTCCTCAAGC-TAAAAATTCATT-TGAACTG-CCCTGGAGAGCTGCCT-GACGTGATACTACAACTTGAGGAGTCAACCGGATCC-ATTGCTGTTGA-CC-AATTGGTCGATCTGTCATTCTATATCGTCCTAGCACCAGTAAGATGAAAAAGAGAGAAGAAAGTGCTAGGAATAGAACAAGATTTGTAAGATCTAGAGAACCATCAGAAGAACAACCTAGAAGCAGCACAAGCAAGAGATTTATAAAATCTGGAGGAGCATTTAGGCCACAACAGAAGAGAAGACCATTAGCATCTAAGGAATCGTCGTATGGGCGAAGATAGATGCCACATTCAATCCTTCATCTTGTTTTTTTTCATTGTCTAGACTTATGGAAATCATGTAAACTTTAGACCATCTAATTTGATAATAGATATTAGTGCTGAGTTTTTATCAAACTATGGTCCAACCATATGCTGTAAATTTGTGTAGGATCATTTCCTCTTTATTCAAAAGGAA]

[+] EMBL AK105879             [GCCGCTGCTGTCCCCTGCTTATCCCCTCCTCCTCCCGGGTTCGCATTCCGTCGAACACCATGACGGCGGCGGCGGCGGCAGCGGCGGTGACCCTCCTCCGCCTCCCTCTCGCCCGACTCTCCTCCCACCTCCGCTCCCTCCCTCCCCGTCCCATACCGCCCCCTCGGCTCCGCGTCTACACCTCCCACCGCCTCCTCTCCTCCCTCCTAGCTCCCAGCCACGTCCCCGCCGTCTCGTCCCTGGCCGAGGCGGTGGCTGCGCCGGATGGTGAGGGGGTCGAAGTGGAGGAGGAGGAGGACGAGGAGGAGGAGGCAGAGGCGCGCCCCACCACCTTCGTGCTGCCGCGGCTGCCGCGGCCGAAGCTGAGCGTGAAGGAGCGGAAGGAGCTCGCGTCGTACGCGCACGGCCTCGGCAAGCGGCTCAAGTCGCAGCAGGTCGGCAAGGGCGGCGTCACGCCGTCCGTCGTCGCCGCCTTCAACGACAACCTCGAGTCCAAC GAGCTCCTCAAGC TAAAAATTCATT TGAACTG CCCTGGAGAGCTGCCT GACGTGATACTACAACTTGAGGAGTCAACCGGATCC ATTGCTGTTGA CCAAATTGGTCGATCTGTCATTCTATATCGTCCTAGCACCAGTAAGATGAAAAAGAGAGAAGAAAGTGCTAGGAATAGAACAAGATTTGTAAGATCTAGAGAACCATCAGAAGAACAACCTAGAAGCAGCACAAGCAAGAGATTTATAAAATCTGGAGGAGCATTTAGGCCACAACAGAAGAGAAGACCATTAGCATCTAAGGAATCGTCGTATGGGCGAAGATAGATGCCACATTCAATCCTTCATCTTGTTTTTTTTCATTGTCTAGACTTATGGAAATCATGTAAACTTTAGACCATCTAATTTGATAATAGATATTAGTGCTGAGTTTTTATCAAACTATGGTCCAACCATATGCTGTAAATTTGTGTAGGATCATTTCCTCTTTATTCAAAAGGAA]
[+] EMBL CA754228             [                             TCCTCCCGGGTTCGCATTCCGTCGAACACCATGACGGCGGCGGCGGCGGCAGCGGCGGTGACCCTCCTCCGCCTCCCTCTCGCCCGACTCTCCTCCCACCTCCGCTCCCTCCCTCCCCGTCCCATACCGCCCCCTCGGCTCCGCGTCTACACCTCCCACCGCCTCCTCTCCTCCCTCCTAGCTCCCAGCCACGTCCCCGCCGTCTCGTCCCTGGCCGAGGCGGTGGCTGCGCCGGATGGTGAGGGGGTCGAAGTGGAGGAGGAGGAGGACGAGGAGGAGGAGGCAGAGGCGCGCCCCACCACCTTCGTGCTGCCGCGGCTGCCGCGGCCGAAGCTGAGCGTGAAGGAGCGGAAGGAGCTCGCGTCGTACGCGCACGGCCTCGGCAAGCGGCTCAAGTCGCAGCAGGTCGGCNAGGGCGGCGTCACGCCGTCCGTCGTCGCCGCCTTCAACGACNACCTCGAGTCCAAC GAGCTCCTNCAGC TAAAAATTCATT TGAACTG CCCTGGAGAGCTGCCT GACGTGATACTACNACTTGAGGAGTCAACCGGATCC ATTGCTGGTGA CC AATTGGTCGATCTGTCATTCTATATCGTCCTAGCACCAGTAAGATGAAAAA                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BI807288             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        tTTCATCGGCAACCTCGAGTCCAACGGAGCTCCTCAAGCGTAAAAAGTCATTGTGAACTGCCCCTGGAGA CTGCCTGGACGTGATACTACAACTTGAGGAGTCAACCGGATCCAATTGCTGTTGACCC AATTGGTCGATCTGTCATTCTATATCGTCCTAGCACC GTAAGATGAAAAAGAGAGAAGAAAGTGCTAGGAATAGAAC AGATTTGTAAGATCTAGAGAACCATCAGAAGAAC ACCTAGAAGCAGCACAAGCAAGAGATTTATAAAATCTGGAGGAGCATTTAGGCCAC ACAGAAGAGAAGACCATTAGCATCTAAGGAATCGTCGTATGGGCGAAGATAGATGCCACATTCAATCCTTCATCTTGTTTTTTTTCATTGTCTAGACTTATGGAAATCATGTAAACTTTAGACCATCTAATTTGATAATAGATATTAGTGCTGAGTTTTTATCAAAaaaa                                                         ]


>consensus_10144#1 GCCGCTGCTGTCCCCTGCTTATCCCCTCCTCCTCCCGGGTTCGCATTCCGTCGAACACCA TGACGGCGGCGGCGGCGGCAGCGGCGGTGACCCTCCTCCGCCTCCCTCTCGCCCGACTCT CCTCCCACCTCCGCTCCCTCCCTCCCCGTCCCATACCGCCCCCTCGGCTCCGCGTCTACA CCTCCCACCGCCTCCTCTCCTCCCTCCTAGCTCCCAGCCACGTCCCCGCCGTCTCGTCCC TGGCCGAGGCGGTGGCTGCGCCGGATGGTGAGGGGGTCGAAGTGGAGGAGGAGGAGGACG AGGAGGAGGAGGCAGAGGCGCGCCCCACCACCTTCGTGCTGCCGCGGCTGCCGCGGCCGA AGCTGAGCGTGAAGGAGCGGAAGGAGCTCGCGTCGTACGCGCACGGCCTCGGCAAGCGGC TCAAGTCGCAGCAGGTCGGCAAGGGCGGCGTCACGCCGTCCGTCGTCGCCGCCTTCAACG ACAACCTCGAGTCCAACGAGCTCCTCAAGCTAAAAATTCATTTGAACTGCCCTGGAGAGC TGCCTGACGTGATACTACAACTTGAGGAGTCAACCGGATCCATTGCTGTTGACCAATTGG TCGATCTGTCATTCTATATCGTCCTAGCACCAGTAAGATGAAAAAGAGAGAAGAAAGTGC TAGGAATAGAACAAGATTTGTAAGATCTAGAGAACCATCAGAAGAACAACCTAGAAGCAG CACAAGCAAGAGATTTATAAAATCTGGAGGAGCATTTAGGCCACAACAGAAGAGAAGACC ATTAGCATCTAAGGAATCGTCGTATGGGCGAAGATAGATGCCACATTCAATCCTTCATCT TGTTTTTTTTCATTGTCTAGACTTATGGAAATCATGTAAACTTTAGACCATCTAATTTGA TAATAGATATTAGTGCTGAGTTTTTATCAAACTATGGTCCAACCATATGCTGTAAATTTG TGTAGGATCATTTCCTCTTTATTCAAAAGGAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10144#0      --------------CTGCTTATCCCCTCCTCCTCCCGGGTTCGCATTCCGTCGAACACCA 46
consensus_10144#1      GCCGCTGCTGTCCCCTGCTTATCCCCTCCTCCTCCCGGGTTCGCATTCCGTCGAACACCA 60
                                     **********************************************

consensus_10144#0      TGACGGCGGCGGCGGCGGCAGCGGCGGTGACCCTCCTCCGCCTCCCTCTCGCCCGACTCT 106
consensus_10144#1      TGACGGCGGCGGCGGCGGCAGCGGCGGTGACCCTCCTCCGCCTCCCTCTCGCCCGACTCT 120
                       ************************************************************

consensus_10144#0      CCTCCCACCTCCGCTCCCTCCCTCCCCGTCCCATACCGCCCCCTCGGCTCCGCGTCTACA 166
consensus_10144#1      CCTCCCACCTCCGCTCCCTCCCTCCCCGTCCCATACCGCCCCCTCGGCTCCGCGTCTACA 180
                       ************************************************************

consensus_10144#0      CCTCCCACCGCCTCCTCTCCTCCCTCCTAGCTCCCAGCCACGTCCCCGCCGTCTCGTCCC 226
consensus_10144#1      CCTCCCACCGCCTCCTCTCCTCCCTCCTAGCTCCCAGCCACGTCCCCGCCGTCTCGTCCC 240
                       ************************************************************

consensus_10144#0      TGGCCGAGGCGGTGGCTGCGCCGGATGGTGAGGGGGTCGAAGTGGAGGAGGAGGAGGACG 286
consensus_10144#1      TGGCCGAGGCGGTGGCTGCGCCGGATGGTGAGGGGGTCGAAGTGGAGGAGGAGGAGGACG 300
                       ************************************************************

consensus_10144#0      AGGAGGAGGAGGCAGAGGCGCGCCCCACCACCTTCGCGCTGCCGCGGCTGCCGCGGCCGA 346
consensus_10144#1      AGGAGGAGGAGGCAGAGGCGCGCCCCACCACCTTCGTGCTGCCGCGGCTGCCGCGGCCGA 360
                       ************************************ ***********************

consensus_10144#0      AGCTGAGCGTGAAGGAGCGGAAGGAGCTCGCGTCGTACGCGCACGGCCTCGGCAAGCGGC 406
consensus_10144#1      AGCTGAGCGTGAAGGAGCGGAAGGAGCTCGCGTCGTACGCGCACGGCCTCGGCAAGCGGC 420
                       ************************************************************

consensus_10144#0      TCAAGTCGCAGCAGGTCGGCAAGGGCGGCGTCACGCCGTCCGTCGTCGCCGCCTTCAACG 466
consensus_10144#1      TCAAGTCGCAGCAGGTCGGCAAGGGCGGCGTCACGCCGTCCGTCGTCGCCGCCTTCAACG 480
                       ************************************************************

consensus_10144#0      ACAACCTCGAGTCCAACGAGCTCCTCAAGGTGCCTCTCCCGTTTCCCCATCCTCTCGCAT 526
consensus_10144#1      ACAACCTCGAGTCCAACGAGCTCCTCAAGCTAAAAATTCATTTGAACTGCCCTGG----- 535
                       ***************************** *     * *  **   *   ***       

consensus_10144#0      TATAAATTCGTGACATGATACAACACATAGTTTACCTACAAATACAATGAGAACAAATAC 586
consensus_10144#1      -AGAGCTGCCTGACGTGATACTACA--------ACTTGAGGAGTCAACCGGATCCATTGC 586
                        * *  * * **** ****** ***        ** *    *  ***   ** * * * *

consensus_10144#0      ATCAATTTCAGTGTATGATATACCAATGGAAATGGGAT--GCTTCATCATGCTGCTGAAT 644
consensus_10144#1      TGTTGACCAATTGGTCGATCTGTCATTCTATATCGTCCTAGCACCAGTAAGATGAAAAAG 646
                                * **   *** *  ** *  * ** *     **  **  * * **   ** 

consensus_10144#0      ACTGATATACAATGATGTCATGTGATTTTGTTTAACTGGGAATT-AGGATCACTGTAGGG 703
consensus_10144#1      AGAGA-AGAAAGTGCTAGGAATAGAACAAGATTTGTAAGATCTAGAGAACCATCAGAAGA 705
                       *  ** * * * ** *   *   **    * **     *   *  ** * **    * * 

consensus_10144#0      TATATTCATCAATAGTTATTAAAGTTAACTAATGCTTTTTATGGTTCGAATCTGATTGTA 763
consensus_10144#1      ACAACCTAGAAGCAGCACAAGCAAGAGATTTATAAAATCTGGAGGAGCATTTAGGCCACA 765
                          *   *  *  **       *    * * **    * *   *    * *  *     *

consensus_10144#0      GGAGTAGATAGGATGCTGAATTGCTGATAACCGCATGCTTTTGGTTTAGGTAGACATGCA 823
consensus_10144#1      ACAGAAGAGAAGACCATTAGCATCTAAGGAAT-CGTCGTATGGGCGAAGATAGA--TGCC 822
                         ** *** * **   * *    ** *  *   * *  * * **   ** ****  *** 

consensus_10144#0      ATATTCAAT--TTAACCATGACTAGGTTGACCTTGAGTTTTCCTTATTATTGGCTTGTTC 881
consensus_10144#1      ACATTCAATCCTTCATCTTGTTTTTTTTCATTGTCTAGACTTATGGAAATCATGTAAACT 882
                       * *******  ** * * **  *   ** *   *      *  *    **    *     

consensus_10144#0      TCTTTCCACCTCGTTT--TGACGGCCCTCATATTTCTTGTTAGGTAATGCAAAGGGTGGT 939
consensus_10144#1      TTAGACCATCTAATTTGATAATAGATATTAGTGCTGAGTTTTTATCAAACTATGGTCCAA 942
                       *    *** **  ***  * *  *   * *    *    **   * *  * * **     

consensus_10144#0      TTACATGCTAGCTAATTCTGTGAAAAAAATGGTGATTGCTTTTTTCCAAACAAACAAACC 999
consensus_10144#1      CCATATGCTG--TAAATTTGTGTAGG--ATCATTTCCTCTTTATTCAAAAGGAA------ 992
                         * *****   *** * **** *    **  *     **** *** ***  **      

consensus_10144#0      AGCATGAGCTCATTATTACAGTACCTTATATGTTATACTAGTCACAGTACATGTTACAGA 1059
consensus_10144#1      ------------------------------------------------------------
                                                                                   

consensus_10144#0      TGTATTTTCCTCCTGTTTGTATTCCTTCCACACAATTGCGCTGGATACAGTCTTTAAACT 1119
consensus_10144#1      ------------------------------------------------------------
                                                                                   

consensus_10144#0      TCTTAATTGGGTTGTTGTTTTGAACTTTACCCCCATGGCATATATTAGATATCCTTAACT 1179
consensus_10144#1      ------------------------------------------------------------
                                                                                   

consensus_10144#0      TCTTTTGTTACTATAGGTCATATGCACGCCTCTTCAAATTGAGAAGTTTTCTGACTTCTA 1239
consensus_10144#1      ------------------------------------------------------------
                                                                                   

consensus_10144#0      GGGTCTTAAGTGAGTAACAGGGATTTCAGGTTAAACTTGTTCTGATTGGTCTTGTGTTAG 1299
consensus_10144#1      ------------------------------------------------------------
                                                                                   

consensus_10144#0      TATTTTTGGTTTGGCTGAGTTGCATAATTGTTGGGCTTTTTTCTGTTTGCATTTGGTGGT 1359
consensus_10144#1      ------------------------------------------------------------
                                                                                   

consensus_10144#0      TTTAACCTATGGTCAGCCCTGCCACAAATCATATAGGTAACACAAAACCATTGTTCATTC 1419
consensus_10144#1      ------------------------------------------------------------
                                                                                   

consensus_10144#0      GGAAGTCATTACAACCCACAGGCCTTTTTTTATTCAAAAGTCTCTCTTTCAAGAAGCAGC 1479
consensus_10144#1      ------------------------------------------------------------
                                                                                   

consensus_10144#0      AAAATTTGTGTTATAGTGCAAGCAAGCGATCTGACTTCTAACCTCTGTGAATGCATATAG 1539
consensus_10144#1      ------------------------------------------------------------
                                                                                   

consensus_10144#0      TTATTAAACCAAAATACTCAAGTTTTTCATAAATATGGAATTGACTTATACTGAATAAAC 1599
consensus_10144#1      ------------------------------------------------------------
                                                                                   

consensus_10144#0      TCCACATCTTTATTCTGGCCTAGCCAAGTTGTGACAGACAATTGTTCGAATTGAGAAGCT 1659
consensus_10144#1      ------------------------------------------------------------
                                                                                   

consensus_10144#0      AAGTGCCTGTGTCCAACACTTAATTTGCACACAAATTTTCCAATAAGGCTGTGTTCCATG 1719
consensus_10144#1      ------------------------------------------------------------
                                                                                   

consensus_10144#0      TGTGCCTGTGTTCCATTCTACGTATTTCGTATGTAAGAGAGCCAATAAGCCTGTAGGATT 1779
consensus_10144#1      ------------------------------------------------------------
                                                                                   

consensus_10144#0      TAGTGTCTTGTGCCTTTTCTTGCTTTAGTGAGCCCTTTTGTTCGGCTTTCCTTTCTGTGA 1839
consensus_10144#1      ------------------------------------------------------------
                                                                                   

consensus_10144#0      TGTTAAGTTGTTCTTCAACATTCGGCATATGTTATGACAGCTAAAAATTCATTTGAACTG 1899
consensus_10144#1      ------------------------------------------------------------
                                                                                   

consensus_10144#0      CCCTGGAGAGCTGCCTGACGTGATACTACAACTTGAGGAGTCAACCGGATCCATTGCTGT 1959
consensus_10144#1      ------------------------------------------------------------
                                                                                   

consensus_10144#0      TGACCAAATTGGTCGATCTGTCATTCTATATCGTCCTAGCACCAGTAAGATGAAAAAGAG 2019
consensus_10144#1      ------------------------------------------------------------
                                                                                   

consensus_10144#0      AGAAGAAAGTGCTAGGAATAGAACAAGATTTGTAAGATCTAGAGAACCATCAGAAGAACA 2079
consensus_10144#1      ------------------------------------------------------------
                                                                                   

consensus_10144#0      ACCTAGAAGCAGCACAAGCAAGAGATTTATAAAATCTGGAGGAGCATTTAGGCCACAACA 2139
consensus_10144#1      ------------------------------------------------------------
                                                                                   

consensus_10144#0      GAAGAGAAGACCATTAGCATCTAAGGAATCGTCGTATGGGCGAAGATAGATGCCACATTC 2199
consensus_10144#1      ------------------------------------------------------------
                                                                                   

consensus_10144#0      AATCCTTCATCTTGTTTTTTTTCATTGTCTAGACTTATGGAAATCATGTAAACTTTAGAC 2259
consensus_10144#1      ------------------------------------------------------------
                                                                                   

consensus_10144#0      CATCTAATTTGATAATAGATATTAGTGCTGA 2290
consensus_10144#1      -------------------------------
                                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)