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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10147#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1726 fasta sequence
[CCACCCATGCTACTCCCAAATCCCCAATCCCCATCCCAAAATCCTCGCCACCTCCGCCCCAAAAATCCTCGCCGCCGACCGGCGCCGCCGTCTTCTCGCGGAGCAAGCAGCGAGCACTACAGCCTCCATGTCGCCGAGCCAGCCAGCCAACATTGTCGTCTTCTCGCCTTACTTGCCGGCGACCCCGTGTCGCTTCGTCATCGTCGAGCCAGCTGTGCCGCTCCCTTCCCTTGGAGCCACTGTTCTGCGCCACCCCCTGTGGAGCCAACATCCGCCGTCGTCTTCTCGTGGAGCCAATGGTCAGCACTGCCACCAAACATCTCGTCCATGGCCATCTCCTCGCTTCCTGTGACTGCTGCTTGTCGGCTCCTCCACACCTCTCCAATTGGTACTGCCATCCTCTACCACTCTGTATGCACTAATACTTATTAGGTTCATTTTGTTTTCCTCGTATTGTTGATCTGCATAACTGTCCTTTTCTGCAGTAGGTATTTTACTACTCAGATTACCTTTGCTTTGCTCTCTATATAGGTATGATTCCTACTAATCCATAAATATTTCTTCTGATATGTTTGCTACCTGTACAATCGGCCTAAAATGCAAACAACAATAAGGTTATCCTATTTCTTTCATAATACATGATTCCCCATTGTTTCAGGGATGCATGATAGTTTTATATATATTGCTGGGATTCCATTTGTTTAACAGCAATGTGGTTATAGCACATATTTTCATTTTTTTACACACAGCAAAATAGCATGCACAAAGAGATATTGGCCTGATTTTTTTCCCTATGTAATTGTACGATGTGACCATATACCTATGGTTAGTGCAGGATGCCACAAAACAATGCACCATGAAGGGTAAACCTATAAAAAATCATTGTGCTACTTGTCCGATTGCACATGTTCTATTTGTGCATGCATAGGAATAATTAGTTACTGCTTTGGTGTACATAAGATTGTTTTTTTTGCTACCTGCTTCAGTGTTCCTAATTGGCTTCATGGCGATACAAATGAGAAGAATGAAGTGTTGATTCAAGCTAGAAGATAATTTACTATTTCATAGATAATCTTGATGTTTAGTACAGAAGGCACACAATTCAACTTGATCGCAACCGCTTGCTGTAGTATGATGCCATGATTGCTTACATTACAAGGCCTATGTATGGACTGTCAGGT-TCATGGTCTTCAGTGAGTGATATATTTGTTGAACTGCATGTGTAACACCTTGCTTTTGTAGGTTCCATGGCTTTGCATATGCTTTTGTAACATTTATGG---GATGAGGGCCTTCATTTGAGTGAATACACATAAGTTGATGGCATTTCTTCATTTTGCATAGTACAAACTCTGCTGTTATGTGCAAATGAGGCCATATGAACAGTTTATCACCATGAGGCTTCAATTCATAATAACCATCAAGGT-AATAATTAAATTTGTTCTAACATTTCTGCATTTTCTTTCAGTAACTGATGTTTATCAGCAAGGGAGTAAACTACCGCAAGTCTTCCAAGTTCTTCTATCTGAAGAAAAGAACACATTTATCCGCGGTAGCACCATTTGTAATTATGAGCACAAATTATATTCAAATTATTTTAGCAATTGTTTAATTTCTTTGGGATAGCTCAGTTATTAATTTTGAAAAAGGATGAATGTCATGTGTGCATCCTTGCTGTTTATCCAGTGATTGGTCATAATGCATATGTTGACTTTAAAAAAAAAAAAAA]
[+] EMBL AK103770 [CCACCCATGCTACTCCCAAATCCCCAATCCCCATCCCAAAATCCTCGCCACCTCCGCCCCAAAAATCCTCGCCGCCGACCGGCGCCGCCGTCTTCTCGCGGAGCAAGCAGCGAGCACTACAGCCTCCATGTCGCCGAGCCAGCCAGCCAACATTGTCGTCTTCTCGCCTTACTTGCCGGCGACCCCGTGTCGCTTCGTCATCGTCGAGCCAGCTGTGCCGCTCCCTTCCCTTGGAGCCACTGTTCTGCGCCACCCCCTGTGGAGCCAACATCCGCCGTCGTCTTCTCGTGGAGCCAATGGTCAGCACTGCCACCAAACATCTCGTCCATGGCCATCTCCTCGCTTCCTGTGACTGCTGCTTGTCGGCTCCTCCACACCTCTCCAATTGGTACTGCCATCCTCTACCACTCTGTATGCACTAATACTTATTAGGTTCATTTTGTTTTCCTCGTATTGTTGATCTGCATAACTGTCCTTTTCTGCAGTAGGTATTTTACTACTCAGATTACCTTTGCTTTGCTCTCTATATAGGTATGATTCCTACTAATCCATAAATATTTCTTCTGATATGTTTGCTACCTGTACAATCGGCCTAAAATGCAAACAACAATAAGGTTATCCTATTTCTTTCATAATACATGATTCCCCATTGTTTCAGGGATGCATGATAGTTTTATATATATTGCTGGGATTCCATTTGTTTAACAGCAATGTGGTTATAGCACATATTTTCATTTTTTTACACACAGCAAAATAGCATGCACAAAGAGATATTGGCCTGATTTTTTTCCCTATGTAATTGTACGATGTGACCATATACCTATGGTTAGTGCAGGATGCCACAAAACAATGCACCATGAAGGGTAAACCTATAAAAAATCATTGTGCTACTTGTCCGATTGCACATGTTCTATTTGTGCATGCATAGGAATAATTAGTTACTGCTTTGGTGTACATAAGATTGTTTTTTTTGCTACCTGCTTCAGTGTTCCTAATTGGCTTCATGGCGATACAAATGAGAAGAATGAAGTGTTGATTCAAGCTAGAAGATAATTTACTATTTCATAGATAATCTTGATGTTTAGTACAGAAGGCACACAATTCAACTTGATCGCAACCGCTTGCTGTAGTATGATGCCATGATTGCTTACATTACAAGGCCTATGTATGGACTGTCAGGT TCATGGTCTTCAGTGAGTGATATATTTGTTGAACTGCATGTGTAACACCTTGCTTTTGTAGGTTCCATGGCTTTGCATATGCTTTTGTAACATTTATGG GATGAGGGCCTTCATTTGAGTGAATACACATAAGTTGATGGCATTTCTTCATTTTGCATAGTACAAACTCTGCTGTTATGTGCAAATGAGGCCATATGAACAGTTTATCACCATGAGGCTTCAATTCATAATAACCATCAAGGT AATAATTAAATTTGTTCTAACATTTCTGCATTTTCTTTCAGTAACTGATGTTTATCAGCAAGGGAGTAAACTACCGCAAGTCTTCCAAGTTCTTCTATCTGAAGAAAAGAACACATTTATCCGCGGTAGCACCATTTGTAATTATGAGCACAAATTATATTCAAATTATTTTAGCAATTGTTTAATTTCTTTGGGATAGCTCAGTTATTAATTTTGAAAAAGGATGAATG ]
[-] EMBL CF312328 [ GCCATGATTGCTTACATTACAAGGCCTATGTATGGACTGTCAGGTNTCATGGTCTTCAGTGAGTGATATATTTGTTGAACTGCATGTGTAACACCTTGCTTTTGTAGGTTCCATGGCTTTGCATATGCTTTTGTAGCATTTATGGGATGATGAGGGCCTTCATTTGAGTGAATACACATAAATTGATGGCATTTCTTCATTTTGCATAGTACAAACTCTGCTGTTATGTGCAAATGAGGCCGTATGAACAGTTTATCACCATGAGGCTTCAATTCATAATAACCATCAAGGTGAATAATTAAATTTGTTCTAACATTTCTGCATTTTCTTTCAGTAACTGATGTTTATCAGCAAGGGAGTAAACTACCGCAAGTCTTCCAAGTTTTTCTATTTGAAGAAAAGAACACATTTATCCGCGGTAGCACCATTTGTAATTATGAGCACAAATTATATTCAAATTATTTTAGCAATTGTTTAATTTCTTTGGGATAGCTCAGTTATTAATTTTGAAAAAGGATGAATGTCATGTGTGCATCCTTGCTGTTTATCCAGTGATTGGTCATAATGCATATGTTGACTTTAAAAAAAAAAAAAA]
consensusID : consensus_10147#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1203 fasta sequence
[CGCCGTCCTCCGTGACAACCAGACCCTCATCCTCGTCGTAGAAACCGGAAGCAGCAAGACCACTTAGGTATTGAATGTGCACCTTTGCCTGTACATCTCCACGTTGAACTGTAAATGTATTTTAGGTTAGTCGTTATTGGAACCTTCGCGAAGACGGTGAATCCTGGTCCGGTGTCTGGTTTGCCCCGGATTCGGGAGGAGTTTCCGTCGAGGTCGAGGGATTTCTGGGGCACAACCAATATCTCCCGTCTCCAAGGAGCTCAACACCCACGCGCAAGAAGCATCAATGACCAGCTCTGGACCTTGATGATTGCACTAGGCTTCAATGCAGTAGTGAGCGTGAGGGTGTCAAACGAGATCAGGTACTAATATGGTCCTTCACATGTTATTGATTCATGGAGAGCTTTCAAGTGAGTCTGTAAGGTGCGCAGGATAGATGTTGGTCCGGGATATCAATGTTCCTCTTCCATTGCTACAGGATCCATGGCTTTGCAGATGCTTTTGTAGCATTTGTGGGATGATGAAGGCCTTCATTTGTACAAATTCACATAAGTTGATGGCATTTCTTCATTTTGCATAGTACAAACACTACTGTTATGTGCAAATGAGGCCATATGAACAGTTCATAACCATGAGCCTTCAATTCATAATAACCAGCAAGGTAATAATTAAATTTGCTCTAACATTTCTGCATTTTCTTTCAGTAACCGATGTTTATCAATGATACTCCCTTCCTGTGACTCTTAGCAATTAGCATGTTACCAACAGGAAGTGTGGCTTTCCTATCTTTTACGCAGGTTGCACTGTTGCACTAAACCATAGGACTGCATTTCTGTTCTCATCTGTTTGTGTTGTTTGTTCATCTCTCTTGAAAAGAGGTCACAAATTTATAATAATGCAGATCTAATCAACAAGGGAGTAAACTACCATGAGTCTTCCAAGTTCTCTCTGAAGAAAATAACACATTTATCTGCAGTAACACCGTTTGTATTTTGAGCACAAATTATATTCAAATTATTTTAGCAATTGTTTAATTTCTTTGGGATATATAAATTACTAATTTTTAAAAAGGATGAATGGCATGTGTGCATCCCCGCTGTTTATCCATTGAACGGTCATAATACATAGTTGACTTTATGTAAAGATACTTAACATTGTTATTGGCTCATCATTTAGATTCCTGCAATCTTAATAGTTCCCTTT]
[+] EMBL AK067929 [CGCCGTCCTCCGTGACAACCAGACCCTCATCCTCGTCGTAGAAACCGGAAGCAGCAAGACCACTTAGGTATTGAATGTGCACCTTTGCCTGTACATCTCCACGTTGAACTGTAAATGTATTTTAGGTTAGTCGTTATTGGAACCTTCGCGAAGACGGTGAATCCTGGTCCGGTGTCTGGTTTGCCCCGGATTCGGGAGGAGTTTCCGTCGAGGTCGAGGGATTTCTGGGGCACAACCAATATCTCCCGTCTCCAAGGAGCTCAACACCCACGCGCAAGAAGCATCAATGACCAGCTCTGGACCTTGATGATTGCACTAGGCTTCAATGCAGTAGTGAGCGTGAGGGTGTCAAACGAGATCAGGTACTAATATGGTCCTTCACATGTTATTGATTCATGGAGAGCTTTCAAGTGAGTCTGTAAGGTGCGCAGGATAGATGTTGGTCCGGGATATCAATGTTCCTCTTCCATTGCTACAGGATCCATGGCTTTGCAGATGCTTTTGTAGCATTTGTGGGATGATGAAGGCCTTCATTTGTACAAATTCACATAAGTTGATGGCATTTCTTCATTTTGCATAGTACAAACACTACTGTTATGTGCAAATGAGGCCATATGAACAGTTCATAACCATGAGCCTTCAATTCATAATAACCAGCAAGGTAATAATTAAATTTGCTCTAACATTTCTGCATTTTCTTTCAGTAACCGATGTTTATCAATGATACTCCCTTCCTGTGACTCTTAGCAATTAGCATGTTACCAACAGGAAGTGTGGCTTTCCTATCTTTTACGCAGGTTGCACTGTTGCACTAAACCATAGGACTGCATTTCTGTTCTCATCTGTTTGTGTTGTTTGTTCATCTCTCTTGAAAAGAGGTCACAAATTTATAATAATGCAGATCTAATCAACAAGGGAGTAAACTACCATGAGTCTTCCAAGTTCTCTCTGAAGAAAATAACACATTTATCTGCAGTAACACCGTTTGTATTTTGAGCACAAATTATATTCAAATTATTTTAGCAATTGTTTAATTTCTTTGGGATATATAAATTACTAATTTTTAAAAAGGATGAATGGCATGTGTGCATCCCCGCTGTTTATCCATTGAACGGTCATAATACATAGTTGACTTTATGTAAAGATACTTAACATTGTTATTGGCTCATCATTTAGATTCCTGCAATCTTAATAGTTCCCTTT]
consensusID : consensus_10147#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 793 fasta sequence
[CTCTGACATATTCTCTCCCCATTCCCCATTTCCGCACCCATGCTACTCCCAAATCCCCAATCCCCATCCCAAAATCCTCGCCACCTCCGCCCCAAAAATTCTCGCTGCAGCGGAGCAAGCAGCGAGCGCTACAGCCACCATGTTGACAAGCCAGCCAGCCAGCGTTGTCGCCTTCTCACCTTACTTGCCGTCGACCCTGTGCCACTTCGTCATCGTCGAGCCAGCGGTGCCGCTCCCTTCCCTTGGAGCCACTGTTCTGCGCCACCTCCCTGTGGAGCCGACCGCCACCGTTGTCTTCTCGTGGAGCCAATGGTCAGCACTGCCACCAACCATCTCGTCCACGGCCATCTCCTCGCTTCTTGTGGCTGCTGCTTGTCGGCTTCTCCACACTTCTCCAATTGTAGGTATTTTACTGCTCAGATTAGCTTTGCTTTGGTCTCTATACAGGTATGATTCCTACTAATTTCCATAAATATTTCTTCTGATATGTTTGCTACCTGTACAATCGGCCTAAAGTGCAAACAACAGTCAGGTTTTCCTATTTCTTTCATAATACATGATTCCCCATTGTTTCAGGGATGCATGATAGTTTTATATATCTTGCTGGGATTCCATTTGTTTAGCAGCCATATGTGGTTATAGCACATATTTTCATTTTTTTTTACACACAGCAGAATAGCATGTACAAAGAGATATTGGCCTGATTTTTTCCCTATGTAATTGTACGATGTGACCATATACCTATGGTTAGTGCAGGATGCCACAAAACAATGCACCATGAAAGGTAAACCTA]
[+] EMBL CB678523 [CTCTGACATATTCTCTCCCCATTCCCCATTTCCGCACCCATGCTACTCCCAAATCCCCAATCCCCATCCCAAAATCCTCGCCACCTCCGCCCCAAAAATTCTCGCTGCAGCGGAGCAAGCAGCGAGCGCTACAGCCACCATGTTGACAAGCCAGCCAGCCAGCGTTGTCGCCTTCTCACCTTACTTGCCGTCGACCCTGTGCCACTTCGTCATCGTCGAGCCAGCGGTGCCGCTCCCTTCCCTTGGAGCCACTGTTCTGCGCCACCTCCCTGTGGAGCCGACCGCCACCGTTGTCTTCTCGTGGAGCCAATGGTCAGCACTGCCACCAACCATCTCGTCCACGGCCATCTCCTCGCTTCTTGTGGCTGCTGCTTGTCGGCTTCTCCACACTTCTCCAATTGTAGGTATTTTACTGCTCAGATTAGCTTTGCTTTGGTCTCTATACAGGTATGATTCCTACTAATTTCCATAAATATTTCTTCTGATATGTTTGCTACCTGTACAATCGGCCTAAAGTGCAAACAACAGTCAGGTTTTCCTATTTCTTTCATAATACATGATTCCCCATTGTTTCAGGGATGCATGATAGTTTTATATATCTTGCTGGGATTCCATTTGTTTAGCAGCCATATGTGGTTATAGCACATATTTTCATTTTTTTTTACACACAGCAGAATAGCATGTACAAAGAGATATTGGCCTGATTTTTTCCCTATGTAATTGTACGATGTGACCATATACCTATGGTTAGTGCAGGATGCCACAAAACAATGCACCATGAAAGGTAAACCTA]
consensusID : consensus_10147#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 669 fasta sequence
[CATGACTGAAGGAGTAGAAAAAAATCCTCGCCACCTCCGCCCCAAAAATCCTCGCCGCCGACCGGCGCCGCCGTCTTCTCGCGGAGCAAGCAGCGAGCACTACAGCCTCCATGTCGCCGAGCCAGCCAGCCAACATTGTCGTCTTCTCGCCTTACTTGCCGGCGACCCCGTGTCGCTTCGTCATCGTCGAGCCAGCTGTGCCGCTCCCTTCCCTTGGAGCCACTGTTCTGCGCCACCCCCTGTGGGGCCAACATCCGCCGTCGTCTTCTCGTGGAGTCAATGGTCAGCACTGCCACCAAACATCTCGTCCATGGCCATCTCCTCGCTTCCTGTGACTGCTGCTTGTCGGCTCCTCCACACCTCTCCAATTGGTACTGCCATCCTCTACCACTCTGTATGCACTAATACTTATTAGGTTCATTTTGTTTTCCTCGTATTGTTGATCTGCATAACTGTTCTTTTCTGCAGTAGGTATTTTACTACTCAGATTACCTTTGCTTTGCTCTCTATATAGGTATGATTCCTACTAATCCATAAATATTTCTTCTGATATGTTTGCTACCTGTACAATCGGCCTAAAATGCAAACAACAATAAGGTTATCCTATTTCTTTCATAATACATGATTCCCCATTGTTTCAGGGATGCATGATAGTTTTATATATATTGC]
[+] EMBL CF312327 [CATGACTGAAGGAGTAGAAAAAAATCCTCGCCACCTCCGCCCCAAAAATCCTCGCCGCCGACCGGCGCCGCCGTCTTCTCGCGGAGCAAGCAGCGAGCACTACAGCCTCCATGTCGCCGAGCCAGCCAGCCAACATTGTCGTCTTCTCGCCTTACTTGCCGGCGACCCCGTGTCGCTTCGTCATCGTCGAGCCAGCTGTGCCGCTCCCTTCCCTTGGAGCCACTGTTCTGCGCCACCCCCTGTGGGGCCAACATCCGCCGTCGTCTTCTCGTGGAGTCAATGGTCAGCACTGCCACCAAACATCTCGTCCATGGCCATCTCCTCGCTTCCTGTGACTGCTGCTTGTCGGCTCCTCCACACCTCTCCAATTGGTACTGCCATCCTCTACCACTCTGTATGCACTAATACTTATTAGGTTCATTTTGTTTTCCTCGTATTGTTGATCTGCATAACTGTTCTTTTCTGCAGTAGGTATTTTACTACTCAGATTACCTTTGCTTTGCTCTCTATATAGGTATGATTCCTACTAATCCATAAATATTTCTTCTGATATGTTTGCTACCTGTACAATCGGCCTAAAATGCAAACAACAATAAGGTTATCCTATTTCTTTCATAATACATGATTCCCCATTGTTTCAGGGATGCATGATAGTTTTATATATATTGC]
consensusID : consensus_10147#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 661 fasta sequence
[AACTGACTGGACTGAAGGAGTAGAAAATCCCCATCCCAAAATCCTCGCCACCTCCGCCCCAAAAATCCTCGCCGCCGACCGGCGCCGCCGTCTTCTCGCGGAGCAAGCAGCGAGCACTACAGCCTCCATGTCGCCGAGCCAGCCAGCCAACATTGTCGTCTTCTCGCCTTACTTGCCGGCGACCCCGTGTCGCTTCGTCATCGTCGAGCCAGCTGTGCCGCTCCCTTCCCTTGGAGCCACTGTTCTGCGCCACCCCCTGTGGAGCCAACATCCGCCGTCGTCTTCTCGTGGAGCCAATGGTCAGCACTGCCACCAAACATCTCGTCCATGGCCATCTCCTCGCTTCCTGTGACTGCTGCTTGTCGGCTCCTCCACACCTCTCCAATTGGTACTGCCATCCTCTACCACTCTGTATGCACTAATACTTATTAGGTTCATTTTGTTTTCCTCGTATTGTTGATCTGCATAACTGTTCTTTTCTGCAGTAGGTATTTTACTACTCAGATTACCTTTGCTTTGCTCTCTATATAGGTATGATTCCTACTAATCCATAAATATTTCTTCTGATATGTTTGCTACCTGTACAATCGGCCTAAAATGCAAACAACAATAAGGTTATCCTATTTCTTTCATAATACATGATTCCCCATTGTTTCAGGGA]
[+] EMBL CF316088 [AACTGACTGGACTGAAGGAGTAGAAAATCCCCATCCCAAAATCCTCGCCACCTCCGCCCCAAAAATCCTCGCCGCCGACCGGCGCCGCCGTCTTCTCGCGGAGCAAGCAGCGAGCACTACAGCCTCCATGTCGCCGAGCCAGCCAGCCAACATTGTCGTCTTCTCGCCTTACTTGCCGGCGACCCCGTGTCGCTTCGTCATCGTCGAGCCAGCTGTGCCGCTCCCTTCCCTTGGAGCCACTGTTCTGCGCCACCCCCTGTGGAGCCAACATCCGCCGTCGTCTTCTCGTGGAGCCAATGGTCAGCACTGCCACCAAACATCTCGTCCATGGCCATCTCCTCGCTTCCTGTGACTGCTGCTTGTCGGCTCCTCCACACCTCTCCAATTGGTACTGCCATCCTCTACCACTCTGTATGCACTAATACTTATTAGGTTCATTTTGTTTTCCTCGTATTGTTGATCTGCATAACTGTTCTTTTCTGCAGTAGGTATTTTACTACTCAGATTACCTTTGCTTTGCTCTCTATATAGGTATGATTCCTACTAATCCATAAATATTTCTTCTGATATGTTTGCTACCTGTACAATCGGCCTAAAATGCAAACAACAATAAGGTTATCCTATTTCTTTCATAATACATGATTCCCCATTGTTTCAGGGA]
consensusID : consensus_10147#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 461 fasta sequence
[TAGGTTCCATAGCTTTGCATATGCTTTTGTAGCATTTATGGGATGATGGGGGCCTTCCTTTGAGTGAATCCACATAAGTGGATGGCATTTCTTCATTTTGCATAGTACAAACTATGCAGTTAGGTGCAAATGAGCCCATATGACCAATTCATCGCCATGGGGCTTCAATTCATAATATCCATCAAGGTAATAACTAAATTTGTTCTATCATTTATGCATTTTGTTTCAGTACCCAATGTTTATCAGCAAGGGAGTAAATTCCCGCGAAGTGGTTGCCAACGTTATTTTCTCCGAAGAAAAGAACACATTTATCCTCGGTAGCACCATTTGTAATTAGGAGCCCAAATTATATTCAAATTATTTTAGCAATGGTTTAATTTCTTTGGGATAGCTTAGTTATTAATTTGGAAAAAGGATGAATGTCATGGGGGTATCCTCGCGGTTTATCCAGGGATTGGTCA]
[-] EMBL CB678524 [TAGGTTCCATAGCTTTGCATATGCTTTTGTAGCATTTATGGGATGATGGGGGCCTTCCTTTGAGTGAATCCACATAAGTGGATGGCATTTCTTCATTTTGCATAGTACAAACTATGCAGTTAGGTGCAAATGAGCCCATATGACCAATTCATCGCCATGGGGCTTCAATTCATAATATCCATCAAGGTAATAACTAAATTTGTTCTATCATTTATGCATTTTGTTTCAGTACCCAATGTTTATCAGCAAGGGAGTAAATTCCCGCGAAGTGGTTGCCAACGTTATTTTCTCCGAAGAAAAGAACACATTTATCCTCGGTAGCACCATTTGTAATTAGGAGCCCAAATTATATTCAAATTATTTTAGCAATGGTTTAATTTCTTTGGGATAGCTTAGTTATTAATTTGGAAAAAGGATGAATGTCATGGGGGTATCCTCGCGGTTTATCCAGGGATTGGTCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10147#3 ------------------------------------------------------------
consensus_10147#4 ------------------------------------------------------------
consensus_10147#2 ------------------------------------------------------------
consensus_10147#0 ------------------------------------------------------------
consensus_10147#1 CGCCGTCCTCCGTGACAACCAGACCCTCATCCTCGTCGTAGAAACCGGAAGCAGCAAGAC 60
consensus_10147#5 ------------------------------------------------------------
consensus_10147#3 ------------------------------------------------------------
consensus_10147#4 ------------------------------------------------------------
consensus_10147#2 ------------------------------------------------------------
consensus_10147#0 ------------------------------------------------------------
consensus_10147#1 CACTTAGGTATTGAATGTGCACCTTTGCCTGTACATCTCCACGTTGAACTGTAAATGTAT 120
consensus_10147#5 ------------------------------------------------------------
consensus_10147#3 ------------------------------------------------------------
consensus_10147#4 ------------------------------------------------------------
consensus_10147#2 ------------------------------------------------------------
consensus_10147#0 ------------------------------------------------------------
consensus_10147#1 TTTAGGTTAGTCGTTATTGGAACCTTCGCGAAGACGGTGAATCCTGGTCCGGTGTCTGGT 180
consensus_10147#5 ------------------------------------------------------------
consensus_10147#3 ------------------------------------------------------------
consensus_10147#4 ------------------------------------------------------------
consensus_10147#2 ------------------------------------------------------------
consensus_10147#0 ------------------------------------------------------------
consensus_10147#1 TTGCCCCGGATTCGGGAGGAGTTTCCGTCGAGGTCGAGGGATTTCTGGGGCACAACCAAT 240
consensus_10147#5 ------------------------------------------------------------
consensus_10147#3 ------------------------------------------------------------
consensus_10147#4 ------------------------------------------------------------
consensus_10147#2 ------------------------------------------------------------
consensus_10147#0 ------------------------------------------------------------
consensus_10147#1 ATCTCCCGTCTCCAAGGAGCTCAACACCCACGCGCAAGAAGCATCAATGACCAGCTCTGG 300
consensus_10147#5 ------------------------------------------------------------
consensus_10147#3 ------------------------------------------------------------
consensus_10147#4 ------------------------------------------------------------
consensus_10147#2 ------------------------------------------------------------
consensus_10147#0 ------------------------------------------------------------
consensus_10147#1 ACCTTGATGATTGCACTAGGCTTCAATGCAGTAGTGAGCGTGAGGGTGTCAAACGAGATC 360
consensus_10147#5 ------------------------------------------------------------
consensus_10147#3 ------------------------------------------------------CATGAC 6
consensus_10147#4 ------------------------------------------------AACTGACTGGAC 12
consensus_10147#2 ------------------------------------CTCTGACATATTCTCTCCCCATTC 24
consensus_10147#0 ---------------------------------------------CCACCCATGCTACTC 15
consensus_10147#1 AGGTACTAATATGGTCCTTCACATGTTATTGATTCATGGAGAGCTTTCAAGTGAGTCTGT 420
consensus_10147#5 ------------------------------------------------------------
consensus_10147#3 TGAAGGAGTAGAAAA-----------AAATCCTCGCCACCTCCGCCCCAAAAATCCTCGC 55
consensus_10147#4 TGAAGGAGTAGAAAATCCCCATCCCAAAATCCTCGCCACCTCCGCCCCAAAAATCCTCGC 72
consensus_10147#2 CCCATTTCCGCACCCATGCTACTCCCAAATCCCCA--ATCCCCATCCCAAAA-TCCTCGC 81
consensus_10147#0 CCAAATCCCCAATCC---CCATCCCAAAATCCTCGCCACCTCCGCCCCAAAAATCCTCGC 72
consensus_10147#1 AAGGTGCGCAGGATAGATGTTGGTCCGGGATATCAATGTTCCTCTTCCATTGCTACAGGA 480
consensus_10147#5 -------------------------------------------------------TAGGT 5
*
consensus_10147#3 CGCCGACCGGCGCCGCCGTCTTCTC----GCGGAGCAAGCA-GCGAGCACTACAGCCTCC 110
consensus_10147#4 CGCCGACCGGCGCCGCCGTCTTCTC----GCGGAGCAAGCA-GCGAGCACTACAGCCTCC 127
consensus_10147#2 CACCT-CCGCCCCAAAAATTCTCGCTGCAGCGGAGCAAGCA-GCGAGCGCTACAGCCACC 139
consensus_10147#0 CGCCGACCGGCGCCGCCGTCTTCTC----GCGGAGCAAGCA-GCGAGCACTACAGCCTCC 127
consensus_10147#1 TCCATGGCTTTGCAGATGCTTTTGT--------AGCATTTGTGGGATGATGAAGGCCTTC 532
consensus_10147#5 TCCATAGCTTTGCATATGCTTTTGT--------AGCATTTATGGGATGATGGGGGCCTTC 57
* * * * **** * ** *** *
consensus_10147#3 ATGTCGCCGAGCCAGCCAGCCAACATTGTCGTCTTCTCGCCTTACTTGCCGGCGACCCCG 170
consensus_10147#4 ATGTCGCCGAGCCAGCCAGCCAACATTGTCGTCTTCTCGCCTTACTTGCCGGCGACCCCG 187
consensus_10147#2 ATGTTGACAAGCCAGCCAGCCAGCGTTGTCGCCTTCTCACCTTACTTGCCGTCGACCCTG 199
consensus_10147#0 ATGTCGCCGAGCCAGCCAGCCAACATTGTCGTCTTCTCGCCTTACTTGCCGGCGACCCCG 187
consensus_10147#1 ATTTGTACAAATTCAC-ATAAGTTGATGGCATTTCTTCATTTTGCATAGTACAAACAC-- 589
consensus_10147#5 CTTTGAGTGAATCCAC-ATAAGTGGATGGCATTTCTTCATTTTGCATAGTACAAACTA-- 114
* * * * * ** * * ** ** * * **
consensus_10147#3 TGTCGCTTCGTCATCGTCGAGCCAGCTGTGCCGCTCCCTTCCCTTGGAGCCACTGTTCTG 230
consensus_10147#4 TGTCGCTTCGTCATCGTCGAGCCAGCTGTGCCGCTCCCTTCCCTTGGAGCCACTGTTCTG 247
consensus_10147#2 TGCCACTTCGTCATCGTCGAGCCAGCGGTGCCGCTCCCTTCCCTTGGAGCCACTGTTCTG 259
consensus_10147#0 TGTCGCTTCGTCATCGTCGAGCCAGCTGTGCCGCTCCCTTCCCTTGGAGCCACTGTTCTG 247
consensus_10147#1 TACTGTTATGTGCAAATGAGGCCATATG-AACAGTTCATAACCATGAGCCTTCAATTCAT 648
consensus_10147#5 TGCAGTTAGGTGCAAATGAGCCCATATG-ACCAATTCATCGCCATGGGGCTTCAATTCAT 173
* * ** * *** * * * * * ** ** * * ***
consensus_10147#3 CGCCACC--CCCTGTGGGGCCAACATCCGCCGTCGTCTTCTCGTG----GAGTCAATGGT 284
consensus_10147#4 CGCCACC--CCCTGTGGAGCCAACATCCGCCGTCGTCTTCTCGTG----GAGCCAATGGT 301
consensus_10147#2 CGCCACCT-CCCTGTGGAGCCGACCGCCACCGTTGTCTTCTCGTG----GAGCCAATGGT 314
consensus_10147#0 CGCCACC--CCCTGTGGAGCCAACATCCGCCGTCGTCTTCTCGTG----GAGCCAATGGT 301
consensus_10147#1 AATAACCAGCAAGGTAATAATTAAATTTGCTCTAACATTTCTGCATTTTCTTTCAGTAAC 708
consensus_10147#5 AATATCCATCAAGGTAATAACTAAATTTGTTCTATCATTTATGCATTTTGTTTCAGTACC 233
** * ** * * ** * ** *
consensus_10147#3 CAGCACT-GCCACCAAACATCTCGTCC----ATGGCCATCTCCTCGCTTCCTGTGACTGC 339
consensus_10147#4 CAGCACT-GCCACCAAACATCTCGTCC----ATGGCCATCTCCTCGCTTCCTGTGACTGC 356
consensus_10147#2 CAGCACT-GCCACCAACCATCTCGTCC----ACGGCCATCTCCTCGCTTCTTGTGGCTGC 369
consensus_10147#0 CAGCACT-GCCACCAAACATCTCGTCC----ATGGCCATCTCCTCGCTTCCTGTGACTGC 356
consensus_10147#1 CGATGTTTATCAATGATACTCCCTTCCTGTGACTCTTAGCAATTAGCATGTTACCAACAG 768
consensus_10147#5 CAATGTTTATCAGCAA-------------------------------------------- 249
* * ** *
consensus_10147#3 TGCTTGTCGGCTCCTCCACACCTCTCCAATTGGTACTGCCATCCTCTACCA-CTCTGTAT 398
consensus_10147#4 TGCTTGTCGGCTCCTCCACACCTCTCCAATTGGTACTGCCATCCTCTACCA-CTCTGTAT 415
consensus_10147#2 TGCTTGTCGGCTTCTCCACACTTCTCCAATTG---------------------------- 401
consensus_10147#0 TGCTTGTCGGCTCCTCCACACCTCTCCAATTGGTACTGCCATCCTCTACCA-CTCTGTAT 415
consensus_10147#1 GAAGTGTGGCTTTCCTATCTTTTACGCAGGTTGCACTGTTGCACTAAACCATAGGACTGC 828
consensus_10147#5 ----------------------------------------------------GGGAGTAA 257
consensus_10147#3 GCACTAATACTTATTAGGTTCATTTTGTTTTCCTCGTATTGTTGATCTGCATAACTGTTC 458
consensus_10147#4 GCACTAATACTTATTAGGTTCATTTTGTTTTCCTCGTATTGTTGATCTGCATAACTGTTC 475
consensus_10147#2 ------------------------------------------------------------
consensus_10147#0 GCACTAATACTTATTAGGTTCATTTTGTTTTCCTCGTATTGTTGATCTGCATAACTGTCC 475
consensus_10147#1 ATTTCTGTTCTCATCTGTTTGTGTTGTTTGTTCATCTCTCTTGAAAAGAGGTCACAAATT 888
consensus_10147#5 ATTCCCGC------------------------------------GAAGTGGTTGCCAACG 281
consensus_10147#3 TTTTCTGCAGTAGGTATTTTACTACTCAGATTACCTTTGCTTTGCTCTCTATATAGGTAT 518
consensus_10147#4 TTTTCTGCAGTAGGTATTTTACTACTCAGATTACCTTTGCTTTGCTCTCTATATAGGTAT 535
consensus_10147#2 ----------TAGGTATTTTACTGCTCAGATTAGCTTTGCTTTGGTCTCTATACAGGTAT 451
consensus_10147#0 TTTTCTGCAGTAGGTATTTTACTACTCAGATTACCTTTGCTTTGCTCTCTATATAGGTAT 535
consensus_10147#1 TATAATAATGCAGATCTAATCAACAAGGGAGTAAACTACCATGAGTCTTC---CAAGTTC 945
consensus_10147#5 TT------------------------------------------------------ATTT 287
*
consensus_10147#3 GATTCCTACTAAT--CCATAAATATTTCTTCTGATATGTTTGCTACCTGTACAATCGGCC 576
consensus_10147#4 GATTCCTACTAAT--CCATAAATATTTCTTCTGATATGTTTGCTACCTGTACAATCGGCC 593
consensus_10147#2 GATTCCTACTAATTTCCATAAATATTTCTTCTGATATGTTTGCTACCTGTACAATCGGCC 511
consensus_10147#0 GATTCCTACTAAT--CCATAAATATTTCTTCTGATATGTTTGCTACCTGTACAATCGGCC 593
consensus_10147#1 TCTCTGAAGAAAATAACACATTTATCTGCAGTAACACCGTTTGTATTT-TG-AGCACAAA 1003
consensus_10147#5 TCTCCGAAGAAAAGAACACATTTATCCTCGGTAGCACCATTTGTAATT-AGGAGCCCAAA 346
* * ** ** * *** * * ** ** * *
consensus_10147#3 TAAAATGCAAACAACAATAAGGTTATCCTATTTCTTTCATAATACATGATTCCCCATTGT 636
consensus_10147#4 TAAAATGCAAACAACAATAAGGTTATCCTATTTCTTTCATAATACATGATTCCCCATTGT 653
consensus_10147#2 TAAAGTGCAAACAACAGTCAGGTTTTCCTATTTCTTTCATAATACATGATTCCCCATTGT 571
consensus_10147#0 TAAAATGCAAACAACAATAAGGTTATCCTATTTCTTTCATAATACATGATTCCCCATTGT 653
consensus_10147#1 TTATATTCAAATTATTTTAGCAATTGTTTAATTTCTTTGGGATATATAAATTACTAATTT 1063
consensus_10147#5 TTATATTCAAATTATTTTAGCAATGGTTTAATTTCTTTGGGATAGCTTAGTTATTAATTT 406
* * * **** * * * ** ** ** *** * * * * * *
consensus_10147#3 TTCAG--GGATGCATGATAGTTTTATATATATTGC------------------------- 669
consensus_10147#4 TTCAG--GGA-------------------------------------------------- 661
consensus_10147#2 TTCAG--GGATGCATGATAGTTTTATATATCTTGCTGGGATTCCATTTGTTTAGCAGCCA 629
consensus_10147#0 TTCAG--GGATGCATGATAGTTTTATATATATTGCTGGGATTCCATTTGTTTAACAGCAA 711
consensus_10147#1 TTAAAAAGGATGAATGGCATGTGTGCAT-CCCCGCTGTTTATCCATTGAACGGTCATAAT 1122
consensus_10147#5 GGAAAAAGGATGAATGTCATGGGGGTAT-CCTCGCGGTTTATCCAGGGATTGGTCA---- 461
* ***
consensus_10147#3 ------------------------------------------------------------
consensus_10147#4 ------------------------------------------------------------
consensus_10147#2 TATGTGGTTATAGCACATATTTTCATTTTTTTTTACACACAGCAGAATAGCATGTACAAA 689
consensus_10147#0 T--GTGGTTATAGCACATATTTTCATTTTTTT--ACACACAGCAAAATAGCATGCACAAA 767
consensus_10147#1 ACATAGTTGACTTTATGTAAAGATACTTAACATTGTTATTGGCTCATCATTTAGATTCCT 1182
consensus_10147#5 ------------------------------------------------------------
consensus_10147#3 ------------------------------------------------------------
consensus_10147#4 ------------------------------------------------------------
consensus_10147#2 GAGATATTGGCCTGATTTTTT-CCCTATGTAATTGTACGATGTGACCATATACCTATGGT 748
consensus_10147#0 GAGATATTGGCCTGATTTTTTTCCCTATGTAATTGTACGATGTGACCATATACCTATGGT 827
consensus_10147#1 GCAATCTTAATAGTTCCCTTT--------------------------------------- 1203
consensus_10147#5 ------------------------------------------------------------
consensus_10147#3 ------------------------------------------------------------
consensus_10147#4 ------------------------------------------------------------
consensus_10147#2 TAGTGCAGGATGCCACAAAACAATGCACCATGAAAGGTAAACCTA--------------- 793
consensus_10147#0 TAGTGCAGGATGCCACAAAACAATGCACCATGAAGGGTAAACCTATAAAAAATCATTGTG 887
consensus_10147#1 ------------------------------------------------------------
consensus_10147#5 ------------------------------------------------------------
consensus_10147#3 ------------------------------------------------------------
consensus_10147#4 ------------------------------------------------------------
consensus_10147#2 ------------------------------------------------------------
consensus_10147#0 CTACTTGTCCGATTGCACATGTTCTATTTGTGCATGCATAGGAATAATTAGTTACTGCTT 947
consensus_10147#1 ------------------------------------------------------------
consensus_10147#5 ------------------------------------------------------------
consensus_10147#3 ------------------------------------------------------------
consensus_10147#4 ------------------------------------------------------------
consensus_10147#2 ------------------------------------------------------------
consensus_10147#0 TGGTGTACATAAGATTGTTTTTTTTGCTACCTGCTTCAGTGTTCCTAATTGGCTTCATGG 1007
consensus_10147#1 ------------------------------------------------------------
consensus_10147#5 ------------------------------------------------------------
consensus_10147#3 ------------------------------------------------------------
consensus_10147#4 ------------------------------------------------------------
consensus_10147#2 ------------------------------------------------------------
consensus_10147#0 CGATACAAATGAGAAGAATGAAGTGTTGATTCAAGCTAGAAGATAATTTACTATTTCATA 1067
consensus_10147#1 ------------------------------------------------------------
consensus_10147#5 ------------------------------------------------------------
consensus_10147#3 ------------------------------------------------------------
consensus_10147#4 ------------------------------------------------------------
consensus_10147#2 ------------------------------------------------------------
consensus_10147#0 GATAATCTTGATGTTTAGTACAGAAGGCACACAATTCAACTTGATCGCAACCGCTTGCTG 1127
consensus_10147#1 ------------------------------------------------------------
consensus_10147#5 ------------------------------------------------------------
consensus_10147#3 ------------------------------------------------------------
consensus_10147#4 ------------------------------------------------------------
consensus_10147#2 ------------------------------------------------------------
consensus_10147#0 TAGTATGATGCCATGATTGCTTACATTACAAGGCCTATGTATGGACTGTCAGGTTCATGG 1187
consensus_10147#1 ------------------------------------------------------------
consensus_10147#5 ------------------------------------------------------------
consensus_10147#3 ------------------------------------------------------------
consensus_10147#4 ------------------------------------------------------------
consensus_10147#2 ------------------------------------------------------------
consensus_10147#0 TCTTCAGTGAGTGATATATTTGTTGAACTGCATGTGTAACACCTTGCTTTTGTAGGTTCC 1247
consensus_10147#1 ------------------------------------------------------------
consensus_10147#5 ------------------------------------------------------------
consensus_10147#3 ------------------------------------------------------------
consensus_10147#4 ------------------------------------------------------------
consensus_10147#2 ------------------------------------------------------------
consensus_10147#0 ATGGCTTTGCATATGCTTTTGTAACATTTATGGGATGAGGGCCTTCATTTGAGTGAATAC 1307
consensus_10147#1 ------------------------------------------------------------
consensus_10147#5 ------------------------------------------------------------
consensus_10147#3 ------------------------------------------------------------
consensus_10147#4 ------------------------------------------------------------
consensus_10147#2 ------------------------------------------------------------
consensus_10147#0 ACATAAGTTGATGGCATTTCTTCATTTTGCATAGTACAAACTCTGCTGTTATGTGCAAAT 1367
consensus_10147#1 ------------------------------------------------------------
consensus_10147#5 ------------------------------------------------------------
consensus_10147#3 ------------------------------------------------------------
consensus_10147#4 ------------------------------------------------------------
consensus_10147#2 ------------------------------------------------------------
consensus_10147#0 GAGGCCATATGAACAGTTTATCACCATGAGGCTTCAATTCATAATAACCATCAAGGTAAT 1427
consensus_10147#1 ------------------------------------------------------------
consensus_10147#5 ------------------------------------------------------------
consensus_10147#3 ------------------------------------------------------------
consensus_10147#4 ------------------------------------------------------------
consensus_10147#2 ------------------------------------------------------------
consensus_10147#0 AATTAAATTTGTTCTAACATTTCTGCATTTTCTTTCAGTAACTGATGTTTATCAGCAAGG 1487
consensus_10147#1 ------------------------------------------------------------
consensus_10147#5 ------------------------------------------------------------
consensus_10147#3 ------------------------------------------------------------
consensus_10147#4 ------------------------------------------------------------
consensus_10147#2 ------------------------------------------------------------
consensus_10147#0 GAGTAAACTACCGCAAGTCTTCCAAGTTCTTCTATCTGAAGAAAAGAACACATTTATCCG 1547
consensus_10147#1 ------------------------------------------------------------
consensus_10147#5 ------------------------------------------------------------
consensus_10147#3 ------------------------------------------------------------
consensus_10147#4 ------------------------------------------------------------
consensus_10147#2 ------------------------------------------------------------
consensus_10147#0 CGGTAGCACCATTTGTAATTATGAGCACAAATTATATTCAAATTATTTTAGCAATTGTTT 1607
consensus_10147#1 ------------------------------------------------------------
consensus_10147#5 ------------------------------------------------------------
consensus_10147#3 ------------------------------------------------------------
consensus_10147#4 ------------------------------------------------------------
consensus_10147#2 ------------------------------------------------------------
consensus_10147#0 AATTTCTTTGGGATAGCTCAGTTATTAATTTTGAAAAAGGATGAATGTCATGTGTGCATC 1667
consensus_10147#1 ------------------------------------------------------------
consensus_10147#5 ------------------------------------------------------------
consensus_10147#3 -----------------------------------------------------------
consensus_10147#4 -----------------------------------------------------------
consensus_10147#2 -----------------------------------------------------------
consensus_10147#0 CTTGCTGTTTATCCAGTGATTGGTCATAATGCATATGTTGACTTTAAAAAAAAAAAAAA 1726
consensus_10147#1 -----------------------------------------------------------
consensus_10147#5 -----------------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||