cluster # 10161

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Oryza sativa
cluster # 10161 cluster # 10161 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10161#0 length = 1495 sequences # 7
consensusID : consensus_10161#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1495
fasta sequence
                              [CCTTGTCCCCCACCTCCTTTACTTGAGCTTGCTCACCACTGCCTCCATATACAGAGAGTCTTCTCTGTATTTCTCTCTCTCAGTGGGAGGCTCACAAGAATCTTTCAGCTCACATCTCACTGTCCTTGCCTTTCTCTAGCTAGGGAGGTCCAAGAACAGAGCAGCAGGATGGTGCAGTGGCGTTTCTAGAGAGCAGCATGAGTACTCGCACCACCGAGCTGGGATGGTCGGCGATGGCGAACACCGATGCAGCCGCCGCCGATGAGGGAGAGGCAGCGGTGGCGGCCTGAGGAAGACGCCATCCTCCTCGCCTACGTCCGCCAGTATGGGCCCCGGGAGTGGAGCCTCGTGTCCCAGCGGATGAACCGCCCCCTCCACCGCGACGCCAAGTCCTGCCTCGAGCGCTGGAAGAACTACCTCCGCCCGGGGATCAAGAAAGGTTCGCTCACCGACGACGAGCAGCGCCTCGTCATCCGCCTCCAGGCCAAGCACGGCAACAAGTGGAAGAAGATCGCCGCCGAGGTCCCCGGCCGGACGGCGAAGCGGCTGGGCAAGTGGTGGGAGGTGTTCAAGGAGAAGCAGCAGCGGGAGCTCCGGGATCGGGATCGCCGGCGACTCCCGCCGCCGCTGGACGGCGACGAGCGCGGCTGCGCCGGCGGGCGATACGACTGGCTCCTCGAGGACTTCGCCGACAAGCTCGTCAACGACCACCACCGCCGAATGATGGCTGCCCCGATCCTCCCGCCGTGGATGTCGTCGTCGCCGTCGTCTTCTTCCTCGCCGTCGGTGACGCTTAGCCTCGCGTCGGCGGCGGTGGCGCCGGCGCCTGCGGCGCCGCCGCCGACGTGGGGTGGTGGTGGAGGAGGGGAGGTGGTGGTGGCGGAGTTGATGGAGTGTTGCAGGGAGATGGAGGAAGGGCAGAGGGCGTGGGCGGCGCACAGGAAGGAGGCGGCGTGGAGGATGAAGAGGGTGGAGATGCAGCTGGAGACGGAGAGGGCGTGCCGGCGGCGGGAGGCGACGGAGGAGTTCGAGG-CGAAGATGAGGGCGCTGAGGGAGGAGCAGGCAGCTGCGG-TGGAGCGGGTGGAGGCGGAGTACCGGGAGAAGATGGCCGGCCTCCGCCGCGACGCGGAGGC-CAAGGAGCAGAAGATGGCGGAGCAGTGGGCGGCCAAGCACGCCCGCCTCGCCAAGTTCCTCGACCAGGTCGCCGCCTGCCGCC-GCTGGCCGCCCGTAGAGATCAACGGCGGCGGCGGCGGC-GGCCCCGGCGGCGGCCGGTGAGCCGCCGGACGGTGGCGCTGCATGCATGCGTAGTTGGACACCTCGCTTTCTTGCTTCTTCTTCTCGTGTCCTTTTTACAACTGTTGGAATTCACTTCTCTCTAGAAATATGTAATCTTTTGAGTCTCTTTTGATCATTCCAAGTTTCCTACTAGTAGCTCTATTGAATAATAAATGGACCACCAAATTGCAAACCAAAATGGTTACAAAAAAAAAAAAAA]

[+] EMBL AB064519             [CCTTGTCCCCCACCTCCTTTACTTGAGCTTGCTCACCACTGCCTCCATATACAGAGAGTCTTCTCTGTATTTCTCTCTCTCAGTGGGAGGCTCACAAGAATCTTTCAGCTCACATCTCACTGTCCTTGCCTTTCTCTAGCTAGGGAGGTCCAAGAACAGAGCAGCAGGATGGTGCAGTGGCGTTTCTAGAGAGCAGCATGAGTACTCGCACCACCGAGCTGGGATGGTCGGCGATGGCGAACACCGATGCAGCCGCCGCCGATGAGGGAGAGGCAGCGGTGGCGGCCTGAGGAAGACGCCATCCTCCTCGCCTACGTCCGCCAGTATGGGCCCCGGGAGTGGAGCCTCGTGTCCCAGCGGATGAACCGCCCCCTCCACCGCGACGCCAAGTCCTGCCTCGAGCGCTGGAAGAACTACCTCCGCCCGGGGATCAAGAAAGGTTCGCTCACCGACGACGAGCAGCGCCTCGTCATCCGCCTCCAGGCCAAGCACGGCAACAAGTGGAAGAAGATCGCCGCCGAGGTCCCCGGCCGGACGGCGAAGCGGCTGGGCAAGTGGTGGGAGGTGTTCAAGGAGAAGCAGCAGCGGGAGCTCCGGGATCGGGATCGCCGGCGACTCCCGCCGCCGCTGGACGGCGACGAGCGCGGCTGCGCCGGCGGGCGATACGACTGGCTCCTCGAGGACTTCGCCGACAAGCTCGTCAACGACCACCACCGCCGAATGATGGCTGCCCCGATCCTCCCGCCGTGGATGTCGTCGTCGCCGTCGTCTTCTTCCTCGCCGTCGGTGACGCTTAGCCTCGCGTCGGCGGCGGTGGCGCCGGCGCCTGCGGCGCCGCCGCCGACGTGGGGTGGTGGTGGAGGAGGGGAGGTGGTGGTGGCGGAGTTGATGGAGTGTTGCAGGGAGATGGAGGAAGGGCAGAGGGCGTGGGCGGCGCACAGGAAGGAGGCGGCGTGGAGGATGAAGAGGGTGGAGATGCAGCTGGAGACGGAGAGGGCGTGCCGGCGGCGGGAGGCGACGGAGGAGTTCGAGG CGAAGATGAGGGCGCTGAGGGAGGAGCAGGCAGCTGCGG TGGAGCGGGTGGAGGCGGAGTACCGGGAGAAGATGGCCGGCCTCCGCCGCGACGCGGAGGC CAAGGAGCAGAAGATGGCGGAGCAGTGGGCGGCCAAGCACGCCCGCCTCGCCAAGTTCCTCGACCAGGTCGCCGCCTGCCGCC GCTGGCCGCCCGTAGAGATCAACGGCGGCGGCGGCGGC GGCCCCGGCGGCGGCCGGTGAGCCGCCGGACGGTGGCGCTGCATGCATGCGTAGTTGGACACCTCGCTTTCTTGCTTCTTCTTCTCGTGTCCTTTTTACAACTGTTGGAATTCACTTCTCTCTAGAAATATGTAATCTTTTGAGTCTCTTTTGATCATTCCAAGTTTCCTACTAGTAGCTCTATTGAATAATAAATGGACCACCAAATTGCAAACCAAAATGGTTACAAAAAAAAAAAA  ]
[+] EMBL OS1321630            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGGAGGCGGCGTGGAGGATGAAGAGGGTGGAGATGCAGCTGGAGACGGAGAGGGCGTGCCGGCGGCGGGAGGCGACGGAGGAGTTCNAGG CGAAGATGAGGGCGCTGAGGGAGGAGCAGGCAGCTGCGG TGGAGCGGGTGGAGGCGGAGTACCGGGAGAAGATGGCCGGCCTCCGCCGCNACGCGTNGGC CAAGNAGCAGAAGATGGCGGA CAGTTGGCGGCCAA                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU161797             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGGAGGCGACGGAGGAGTTCGAGG CGAAGATGAGGGCGCTGAGGGAGGAGCAGGCAGCTGCGGTTGGAGCGGGTGGAGGCGGAGTACCGGGAGAAGATGGCCGGCCTCCGCCNNGACGC GAGGC NAAGGAGCAGAAGATGGCGGA NAGTGGGCGGCCAAGCACGCCCGTNTCGCCAAGTTCCTCGACCAGGTCGCCGCCTGCNGNC GCTGGCCGCCCGTAGAGATCAACGGCGGCGGCGGCGG                                                                                                                                                                                                                                                   ]
[+] EMBL BM420710             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    agcgncCGGAGGAGTTCGAGGCCGAAGATGAGGGC CTGA GGAGGA CAAGCA CT CGN TGGACCGGGTGGA GCGGAGTACCGGGAGAAGATGGCCGGCCTCCGCCGCGACGCGGAGGC CAAGGAGCAGAAGAT GCGGACAAGTGGGCGGCCAAGCACGCCCGCCTCGCCAAGTTCCTCGACCAGGTC CCGCCTGCCGCCAGCTGGCCGCCCGTAGAGATCAACGGCGGCGGCGGCGGCAGGCCCCGGCGGCGGCCGGTGAGCCCCCGGACGGTGGCGCTGCATGCATGCGTAGTTGGACACCTCGCTTTCTTG   CTTCTTCTCGTGTCCTTTTTACAACTGTTGGAATTCACTTCTCTCTAGAAATATGTAATCTTTTGAGTCTCTTTTGATCAaaaaaaaaa                                                                           ]
[-] EMBL CB966205             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGGAGCAGGCAGCTGCGG TGGAGCGGGTGGAGGCGGAGTACCGGGAGAAGATGGCCGGCCTCCGCCGCGACGCGGAGGCACAAGGAGCAGAAGATGGCGGAGCAGTGGCAGGCCAAGCACGCCCGCCTCGCCAAGTTCATCGACCAGATCGCCGCCTcaccc                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB965674             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGGAGCAGGCAGCTGCGG TGGAGCGGGTGGAGGCGGAGTACCGGGAGAAGATGGCCGGCCTCCGCCGCGACGCGGAGGC CAAGGAGCAGAAGATGGCGGAGCAGTGGGCGGCCAAGCACGCCCGCCTCGCCAAGTTCCTCGACCAGGTCGCCGCCTGCCGCC                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU223263             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GGGTGNAGGCGGAGTACCGGGANAAGATGGCCGGCCTCCNCCGCGACGCGGAGGC CAAGGAGCAGAANATGGCGGAGCAGTGGGCGGCCAAGCACGCCCGCCTCGCCAAGTTCCTCGACCAGGTCGCCGCCTGCCGCC GCTGGCCGCCCGTAGAGATCAACGGCGGCGGCGGCGGC GGCCCCGGCGGCGGCCGGTGAGCCNCCGGACGGTGGCGCTGCATGCATGCGTAGTTGGACACCTCGCTTTCTTGCTTCTTCTTCTCGTGTCCTTTTTACAACTGTTGGAATTCACTTCTCTCTAGAAATATGTAATCTTTTGAGTCTCTTTTGATCATTCCAAGTTTCCTACTAGTAGCTCTATTGAATAATAAATGGACCNCCAAATTGCAAACCAAAATGGTTTCAAAAAAAAAAAAAA]




>consensus_10161#0
CCTTGTCCCCCACCTCCTTTACTTGAGCTTGCTCACCACTGCCTCCATATACAGAGAGTC
TTCTCTGTATTTCTCTCTCTCAGTGGGAGGCTCACAAGAATCTTTCAGCTCACATCTCAC
TGTCCTTGCCTTTCTCTAGCTAGGGAGGTCCAAGAACAGAGCAGCAGGATGGTGCAGTGG
CGTTTCTAGAGAGCAGCATGAGTACTCGCACCACCGAGCTGGGATGGTCGGCGATGGCGA
ACACCGATGCAGCCGCCGCCGATGAGGGAGAGGCAGCGGTGGCGGCCTGAGGAAGACGCC
ATCCTCCTCGCCTACGTCCGCCAGTATGGGCCCCGGGAGTGGAGCCTCGTGTCCCAGCGG
ATGAACCGCCCCCTCCACCGCGACGCCAAGTCCTGCCTCGAGCGCTGGAAGAACTACCTC
CGCCCGGGGATCAAGAAAGGTTCGCTCACCGACGACGAGCAGCGCCTCGTCATCCGCCTC
CAGGCCAAGCACGGCAACAAGTGGAAGAAGATCGCCGCCGAGGTCCCCGGCCGGACGGCG
AAGCGGCTGGGCAAGTGGTGGGAGGTGTTCAAGGAGAAGCAGCAGCGGGAGCTCCGGGAT
CGGGATCGCCGGCGACTCCCGCCGCCGCTGGACGGCGACGAGCGCGGCTGCGCCGGCGGG
CGATACGACTGGCTCCTCGAGGACTTCGCCGACAAGCTCGTCAACGACCACCACCGCCGA
ATGATGGCTGCCCCGATCCTCCCGCCGTGGATGTCGTCGTCGCCGTCGTCTTCTTCCTCG
CCGTCGGTGACGCTTAGCCTCGCGTCGGCGGCGGTGGCGCCGGCGCCTGCGGCGCCGCCG
CCGACGTGGGGTGGTGGTGGAGGAGGGGAGGTGGTGGTGGCGGAGTTGATGGAGTGTTGC
AGGGAGATGGAGGAAGGGCAGAGGGCGTGGGCGGCGCACAGGAAGGAGGCGGCGTGGAGG
ATGAAGAGGGTGGAGATGCAGCTGGAGACGGAGAGGGCGTGCCGGCGGCGGGAGGCGACG
GAGGAGTTCGAGGCGAAGATGAGGGCGCTGAGGGAGGAGCAGGCAGCTGCGGTGGAGCGG
GTGGAGGCGGAGTACCGGGAGAAGATGGCCGGCCTCCGCCGCGACGCGGAGGCCAAGGAG
CAGAAGATGGCGGAGCAGTGGGCGGCCAAGCACGCCCGCCTCGCCAAGTTCCTCGACCAG
GTCGCCGCCTGCCGCCGCTGGCCGCCCGTAGAGATCAACGGCGGCGGCGGCGGCGGCCCC
GGCGGCGGCCGGTGAGCCGCCGGACGGTGGCGCTGCATGCATGCGTAGTTGGACACCTCG
CTTTCTTGCTTCTTCTTCTCGTGTCCTTTTTACAACTGTTGGAATTCACTTCTCTCTAGA
AATATGTAATCTTTTGAGTCTCTTTTGATCATTCCAAGTTTCCTACTAGTAGCTCTATTG
AATAATAAATGGACCACCAAATTGCAAACCAAAATGGTTACAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case