These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10162#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1225 fasta sequence [TCATCGAACACCTTGCGATCACCCTCTCACCACCGCTACAGATCACCATTGTGAGGCTCCCCGGCCGGAGCTGGAGGTTGGAGGGAGTGGAGGAAGAGCCGTGCTGCCGCCGTCGCCATAGGGGAAGCCGGGTAGCCGCTGGACATCAAGAAAAGCCGTCAAGCACCTTACGTCGCCGCTGTCTGCCCCTGTCCTGCACCGTGTCGAGCTCCACTTTGCCGCGTTTTGCCATCTCGCCGTCTCGCGGTACACCCTCGTGCCCGTAGCGTCCTCCATACATCTAATTGCTAGCGCCGGCTCCAAAATCGGCGATTAGCGCCCATGGCCGTGCCGCCCCGGCCGCCGTTTCGTCGCCGGCGAGCCCTCCGTGGGTAGGCTATCCCGGGAGCTCCCCTCTCCATATAGTTTGTGAAATCGAATCCCCATACGCCGTAGATGCTCCCGCACCCTTCAATTCGGCCGGAGGATGTCCCTAGCACCGAAGCCCCTTGTAGCCGAGCTCGGGCATGGCGTCGCCTGATGGCGCCGCGCGTCCCCGTCTCCTCGCGCGCCGGCTGCCATCGGCGGGAGATCGTCGGAGCTCCTCTGCGCCTCACCCCGGCCGTCGCCGAGCCGCCCGCTGCCGTCCCGGCTCGGGCCGGCC-ACGCCGGCTGCGCCGAGCCGTGCCTCTGCCTCGCTCGGTAACGGGCGAGAGGAAGAAGAAGATGAGGAGAGAGAGAAACCGTGTGGGACCCACATGTGATTAGCGCACAGTAATCCTATCCCTAACGGTGATTATCCCACTCAATGGCAGGTGGGGTCCCTATAGTTAAAATCTAAGAAAACACAATTATATATTTTGTTCCTATGACAGGCGGGACCCAATGGTAATTAAACAAGCAGGTTTGACCCTAAGTCAACCAGGGCCGGTCCCACATGTCAACCACAGTGGGTTTTGGATAATGTTTCCGATTAAAAATAAATCATTTATGAACAGTGCATTTTTACAATTTCTCGGATTAACTCAAATTTGAATCTTTAAATTAGTATAACTTATTCATTTTAGCTCCGATTCGAGTGAAACTTGAACCTAAATTCATCTAAATTCATAAGCTTTCCAATGGTATATAACTCACTATTTAATAAAATATATTAATATCAAATGATTAGATTATGGTCAACTTAAAAATGTGCTAATAAATAAAATTGATATTGTACAGTAGAGTAGAGCAGTGGAGTCTGAAAC] [+] EMBL AK063461 [TCATCGAACACCTTGCGATCACCCTCTCACCACCGCTACAGATCACCATTGTGAGGCTCCCCGGCCGGAGCTGGAGGTTGGAGGGAGTGGAGGAAGAGCCGTGCTGCCGCCGTCGCCATAGGGGAAGCCGGGTAGCCGCTGGACATCAAGAAAAGCCGTCAAGCACCTTACGTCGCCGCTGTCTGCCCCTGTCCTGCACCGTGTCGAGCTCCACTTTGCCGCGTTTTGCCATCTCGCCGTCTCGCGGTACACCCTCGTGCCCGTAGCGTCCTCCATACATCTAATTGCTAGCGCCGGCTCCAAAATCGGCGATTAGCGCCCATGGCCGTGCCGCCCCGGCCGCCGTTTCGTCGCCGGCGAGCCCTCCGTGGGTAGGCTATCCCGGGAGCTCCCCTCTCCATATAGTTTGTGAAATCGAATCCCCATACGCCGTAGATGCTCCCGCACCCTTCAATTCGGCCGGAGGATGTCCCTAGCACCGAAGCCCCTTGTAGCCGAGCTCGGGCATGGCGTCGCCTGATGGCGCCGCGCGTCCCCGTCTCCTCGCGCGCCGGCTGCCATCGGCGGGAGATCGTCGGAGCTCCTCTGCGCCTCACCCCGGCCGTCGCCGAGCCGCCCGCTGCCGTCCCGGCTCGGGCCGGCC ACGCCGGCTGCGCCGAGCCGTGCCTCTGCCTCGCTCGGTAACGGGCGAGAGGAAGAAGAAGATGAGGAGAGAGAGAAACCGTGTGGGACCCACATGTGATTAGCGCACAGTAATCCTATCCCTAACGGTGATTATCCCACTCAATGGCAGGTGGGGTCCCTATAGTTAAAATCTAAGAAAACACAATTATATATTTTGTTCCTATGACAGGCGGGACCCAATGGTAATTAAACAAGCAGGTTTGACCCTAAGTCAACCAGGGCCGGTCCCACATGTCAACCACAGTGGGTTTTGGATAATGTTTCCGATTAAAAATAAATCATTTATGAAC ] [+] EMBL AK060977 [ ATCGAACACCTTGCGATCACCCTCTCACCACCGCTACAGATCACCATTGTGAGGCTCCCCGGCCGGAGCTGGAGGTTGGAGGGAGTGGAGGAAGAGCCGTGCTGCCGCCGTCGCCATAGGGGAAGCCGGGTAGCCGCTGGACATCAAGAAAAGCCGTCAAGCACCTTACGTCGCCGCTGTCTGCCCCTGTCCTGCACCGTGTCGAGCTCCACTTTGCCGCGTTTTGCCATCTCGCCGTCTCGCGGTACACCCTCGTGCCCGTAGCGTCCTCCATACATCTAATTGCTAGCGCCGGCTCCAAAATCGGCGATTAGCGCCCATGGCCGTGCCGCCCCGGCCGCCGTTTCGTCGCCGGCGAGCCCTCCGTGGGTAGGCTATCCCGGGAGCTCCCCTCTCCATATAGTTTGTGAAATCGAATCCCCATACGCCGTAGATGCTCCCGCACCCTTCAATTCGGCCGGAGGATGTCCCTAGCACCGAAGCCCCTTGTAGCCGAGCTCGGGCATGGCGTCGCCTGATGGCGCCGCGCGTCCCCGTCTCCTCGCGCGCCGGCTGCCATCGGCGGGAGATCGTCGGAGCTCCTCTGCGCCTCACCCCGGCCGTCGCCGAGCCGCCCGCTGCCGTCCCGGCTCGGGCCGGCC ACGCCGGCTGCGCCGAGCCGTGCCTCTGCCTCGCTCGGTAACGGGCGAGAGGAAGAAGAAGATGAGGAGAGAGAGAAACCGTGTGGGACCCACATGTGATTAGCGCACAGTAATCCTATCCCTAACGGTGATTATCCCACTCAATGGCAGGTGGGGTCCCTATAGTTAAAATCTAAGAAAACACAATTATATATTTTGTTCCTATGACAGGCGGGACCCAATGGTAATTAAACAAGCAGGTTTGACCCTAAGTCAACCAGGGCCGGTCCCACATGTCAACCACAGTGGGTTTTGGATAATGTTTCCGATTAAAAATAAATCATTTATGAACAGTGCATTTTTACAATTTCTC ] [+] EMBL C26518 [ GCGATCACCCTCTCACCACCGCTACAGATCACCATTGTGAGGCTCCCCNGCCGGAGCTGGAGGTTGGAGGGAGTGGAGGAAGAGCCGTGCTGCCGCCGTCGCCATAGGGGAAGCCGGGTAGCCGCTGGACATCAAGAAAAGCCGTCAAGCACCTTACGTCGCCGCTGTCTGCCCCTGTCCTGCACCGTGTCGAGCTCCACTTTGCCGCGTTTTGCCATCTCGCCGTCTCGCGGTACACCCTCGTGCCCGTAGCGTCCTCCATACATCTAATTGCTAGCGCCGGCTCCAAAATCGGCGATTAGGGCCCATGGCCGTG CGNCCCNG CGCCGTTTCGTCGCGAGCG ] [+] EMBL CB639325 [ GATCACCCTCTCACCACCGCTAGAGATCACCATTGTGAGGCTCCCCGGCCGGAGCTGGAGGTTGGACGGAGTGGAGGAAGAGCCGTGCTGCCGCCGTCGCCATGGGGGAAGCCGGGTAGCCGCTGGACATCCAGAAACGCCGTCGAGCACCTTACGTCGCCGCCGTCTGCCCCTGTCCTGCACCGCGTCGAGCTCCACTTCGCCGCGTTTCGCCATCTCGCCGTCTCGCGGTACACCCTCGCGCCTGTAGCGTCCTCCATACATCTAATTGCTAGCGCCGGCTCCAAAATCGGCGATTAGCGCCCATGGCCGTGCCGCCCCGGCCGCCGTTTCGTCGCCGGCGAGCTCTCCGTGGGTAGGCTATCCCGGGAGCTCCCCTCTCCATATAGTTCGTGAAATCGAATCCCCATACCCCGTAGATGCTCCCGCACCCTTCAATTCTGCCGGAAGATGTCCCTAGCACC ] [+] EMBL CB655579 [ TCACCCTCTCACCACCGCTAGAGATCACCATTGTGAGGCTCCCCGGCCGGAGCTGGAGGTTGGAGGGAGTGGAGGAAGAGCCGTGCTGCCGCCGTCGCCATGGGGGAAGCCAGGTAGCCGCTGGACATCAAGAAACGCCGTCGAGCACCTTACATCGCCGCTGTCTGCCCCTGTCCTGCACCGCGTCGAGCTCCACTTCGCCGCGTTTCGCCATCTCGCCGTCTCGCGGTACACCCTCGCGCCCGTAGCGTCCTCCATACATCTAATTGCTAGCGCCGGCTCCAAAATCGGCGATTAGCGCCCATGGCCGTGCCGCCCCGGCCGCCGTTTCGTCGCCGGCGAGCTCTCCGTGGGTAGGCTATCCCGGCAGCTCCCCTCTCCATATAGTTCGTGAAATCGAATCCCCATACCCCGTAGATGCTCCCGCACCCTTCAATTCGGCCGGAGGATGTCCCTAGCACCGAAGCCCCTTGTAGCCGAGCTCGGGCATGGCGTCGCCTGATGGCGCCGCGCGCCCCCGTCTCCTCGCGCGCCGGCTGCCATCGGCGGGAGATCGCCGGAGCTCCTCCGCGCCTCACCCCGGCCCTCGCCGAGCCGCCCGCCGCCGTCCCGGCTCGGGCCGGCC ACGCCGGCTGCGCCGAGTCACGCCTCTGCCTCGCTCGGTAACGGGCGAGAGGAAGAAGAAGATGAGGAGAGAGAGAAACCATGTGGGACCCACATGTCATTAGCGCACAGTAATCCTATCCCTAACGGTGATTATCCCACTCAATGGCAGGTGGGGTCCCTATAGTTAAAATCTAAGAAAACACAATTATATATTTT ] [-] EMBL CB655580 [ GTAGCCGAGCTCGGGCATGGCGTCGCCTGATGGCGCCGCGCGCCCCCGTCTCCTCGCGCGCCGGCTGCCATCGGCGGGAGATCGCCGGAGCTCCTCCGCGCCTCACCCCGGCCCTCGCCGAGCCGCCCGCCGCCGTCCCGGCTCGGGCCGGCC ACGCCGGCTGCGCCGAGTCACGCCTCTGCCTCGCTCGGTAACGGGCGAGAGGAAGAAGAAGATGAGGAGAGAGAGAAACCATGTGGGACCCACATGTCATTAGCGCACAGTAATCCTATCCCTAACGGTGATTATCCCACTCAATGGCAGGTGGGGTCCCTATAGTTAAAATCTAAGAAAACACAATTATATATTTTATTCCTATGACAGGCGGGACCCAATGGTAATTAAACAAGCAGGTTTGACCCTAAGTCAACCAGGGCCGGTCCCACATGTCAACCACAGTGGGTTTTGGATAATGTTTCCGATTAAAAATAAATCATTTATGAACAGTGCATTTTTACAATTTCTCGGATTAACTCAAATTTGAATCTTTAAATTAGTATAACTTATTCATTTTAGCTCCGATTCGAGTGAAACTTGAACCTAAATTCATCTAAATTCATAAGCTTTCCAATGGTATATAACTCACTATTTAATAAAATATATTAATATCAAATGATTAGATTATGGTCAACTTAAAAATGTGCTAATAAATAAAATTGATATTGTACAGTAGAGTAGAGCAGTGGAGTCTGAAAC] [+] EMBL AU081505 [ GGTTGCCATCGGCGGGANATCGTCGGAGCTCCTCTGCGCCTCACCCCGGCCNTCGCCGAGCCGCCCGCTGCCGTCCCGGCTCGGGCCGGCCNACGAC NTGCGCCGAGCCGTGCCTCTGCCTCGCTCGGTAACGGGCGAGAGGAAGAAGAAGATGAGGAGAGAGAGAAACCGTGTGGGACCCACATGTGATTAGCGCACAGTAATCCTAT CCTAACGGTGATTATCCCACTCAATGGCAGGTGGGGTCCCTATAGTTAAAATCTAAGAAAACACAATTATATATTTTGTTCCTATGACAGGCGGGACCCAATGGTAATTAAACAAGCAGGTTTGACCCTAAGTCAACCAGGGCCGGTCCCACATGTCAACCACAGTGGGTTTTGGATAATGTTTCCGATTAAAAATAAATCATTTATGAACAGTGCATTTTTACAAaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||