These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10164#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1867 fasta sequence [GGGGCCGCGGAGGAAGTGGGGGAGGGAAATTAGCGGCTCCCAGGCACGGGAGGGACACCGAGAATAGCGCCCCCAAATCCAGGGCCCCGGTCTAAAATCCATCCAGGCAGCCGCCGTCCAATCCCAATCCCAATCCCAATCCTACCTTGTCTTTGTTCTTTCTTCCTCCGACGACGAGGGGAGATTGCTGGTCAGCTCTCTGTCTTCCTTCCTTCCTTCTTTCTTCCTGGTTGGAGGATTGATCAAATCCTGCAAAGGATTAGGTTTTCTTGGGATTGGTGGGTGGTAGTCTTGTCCTCCCCCCAAATCGTTTTTGATTTGATTTGATTTGGGTTGGGTTGGGGTTCATCGAATCAATCATTTCAAGAACAGAGTTATTCTCGGCGGATTTCTTCCACCGCCGTCAGTTCTTGTGTGGATTGTGTCTCTTCCGTTCTGTTTCGGTTTCAGAATCTGCAGTTCGTCGTCGGACCGGTTGTTTCCTGAGTCCCATCTGAGGATAGGTTCAAAATAAATTCAGAATCCAAGCCTGGTTGTCTCCGAGTTGAAGCTATGGCTGCGCGGCCGACG-ACGTCGGAGTCCGGGAGCACGACGACCGACGACGACGTGCACCTTTCGCCGACCAGCATCTGCAGCGGCGGC-GGAGGTGGGGCCTGCGTCGTCGTCGGCGGCAGCCGCATCAAGATACTCTGCAGCTTCGGCGGCCGCATCATGCCCCGGCCGTCC-GACGGTGCCCTCAAGTACATCGGCGGCGAGACCCGC-GTCCTCGCCGTGCCCCGCTCCATCCCCTTCTCCGATTTGAAGAAGAAGGTGGAGGAGATGTTCAGGACGGAGGTGGCGGCCATCAAGTACCAGCTCGTCGCCGAGGACCTCGACGTGCTCGTCTCCGTCACCTGCGACGAGGACCTGACCCACATGCTCGACGAGTACGACCGCTTCGAGGCGAAGCGGTCGCCGTCGGCGTCGCCGCGGTTCCGCGTCTACGTCTTCTCCTCGCAGCCGCCGGTGGCCG-CCGCCGTCCCGTCCACCTCCCGCCACGCCGGCTACGCGCCGCCGGCGT-CCCACCACCACCTCCTCCAGCACCACCTCCACCACTTCCAGCCGGACCAC-TACGTCGCCACGCCCGAC-GGGAGCCCGCCG-TAC-GCC-GGACAC-TCGCAC-GGC-GCCGTGTCGGCGGGCAACTCCCCGC-GCGCCGACGCCGTGGGCCCCG-ACCACCCCGCCGTGTTC-GGGCTCAAGATGCAGCGCGT--CCGGAGCACGCCGAACCTCGGCAGCCTGGACGCGTCGCCGCAGCACTACCACCAGCACGCCGCGGACGTCGGTGGCGGCGGCGGCGGCATGGCGGGATACATGGGCGGCAGCTCGCCTGTGCACGCCGGCGCCGGCCACCTCGTCTCGCAGGGCGGCTTCCACAGCTACTACCACCCGCACGGGCAGTACGCCCCGGCGCCCGTGCCGGTGCCGCACCACGCCGGCGTGGGGAGGTACGACACGCGTGGTGGTGGTGGCTACGTGCGAGGCAGCAACTACGTGGCGGCGCCGCCGCCGCCGATGATGCCGGTGGCGGTCCGGTCCGGCCGGCCGGTCTCCCGCGGCGGCGGGGCCCCGCCGTACAACGAGATGCACACGCCGAAGAATGCGACGACGATATGGGATTGATGACCGTACGCCGGAGCTTGCTGACGTTGTGGTTTTTGCAGGGAGAGATGTAAATAGATGGATATGGATCGTGGATGCACGCGGCGTCGCAGTAATCTTGTTAGTAGTTGTTTTTGCTGATGAGAAGAGGTCCAGTTTGCTGTAGAACTATTGTTGTTCACGCTGAGAAAATTATTTAAAACGTTCTTTTTCCCAAATATCAACTGCAAGGTTG] [+] EMBL AK120642 [GGGGCCGCGGAGGAAGTGGGGGAGGGAAATTAGCGGCTCCCAGGCACGGGAGGGACACCGAGAATAGCGCCCCCAAATCCAGGGCCCCGGTCTAAAATCCATCCAGGCAGCCGCCGTCCAATCCCAATCCCAATCCCAATCCTACCTTGTCTTTGTTCTTTCTTCCTCCGACGACGAGGGGAGATTGCTGGTCAGCTCTCTGTCTTCCTTCCTTCCTTCTTTCTTCCTGGTTGGAGGATTGATCAAATCCTGCAAAGGATTAGGTTTTCTTGGGATTGGTGGGTGGTAGTCTTGTCCTCCCCCCAAATCGTTTTTGATTTGATTTGATTTGGGTTGGGTTGGGGTTCATCGAATCAATCATTTCAAGAACAGAGTTATTCTCGGCGGATTTCTTCCACCGCCGTCAGTTCTTGTGTGGATTGTGTCTCTTCCGTTCTGTTTCGGTTTCAGAATCTGCAGTTCGTCGTCGGACCGGTTGTTTCCTGAGTCCCATCTGAGGATAGGTTCAAAATAAATTCAGAATCCAAGCCTGGTTGTCTCCGAGTTGAAGCTATGGCTGCGCGGCCGACG ACGTCGGAGTCCGGGAGCACGACGACCGACGACGACGTGCACCTTTCGCCGACCAGCATCTGCAGCGGCGGC GGAGGTGGGGCCTGCGTCGTCGTCGGCGGCAGCCGCATCAAGATACTCTGCAGCTTCGGCGGCCGCATCATGCCCCGGCCGTCC GACGGTGCCCTCAAGTACATCGGCGGCGAGACCCGC GTCCTCGCCGTGCCCCGCTCCATCCCCTTCTCCGATTTGAAGAAGAAGGTGGAGGAGATGTTCAGGACGGAGGTGGCGGCCATCAAGTACCAGCTCGTCGCCGAGGACCTCGACGTGCTCGTCTCCGTCACCTGCGACGAGGACCTGACCCACATGCTCGACGAGTACGACCGCTTCGAGGCGAAGCGGTCGCCGTCGGCGTCGCCGCGGTTCCGCGTCTACGTCTTCTCCTCGCAGCCGCCGGTGGCCG CCGCCGTCCCGTCCACCTCCCGCCACGCCGGCTACGCGCCGCCGGCGT CCCACCACCACCTCCTCCAGCACCACCTCCACCACTTCCAGCCGGACCAC TACGTCGCCACGCCCGAC GGGAGCCCGCCG TAC GCC GGACAC TCGCAC GGC GCCGTGTCGGCGGGCAACTCCCCGC GCGCCGACGCCGTGGGCCCCG ACCACCACGCCGTGTTC GGGCTCAAGATGCAGCGCGT CCGGAGCACGCCGAACCTCGGCAGCCTGGACGCGTCGCCGCAGCACTACCACCAGCACGCCGCGGACGTCGGTGGCGGCGGCGGCGGCATGGCGGGATACATGGGCGGCAGCTCGCCTGTGCACGCCGGCGCCGGCCACCTCGTCTCGCAGGGCGGCTTCCACAGCTACTACCACCCGCACGGGCAGTACGCCCCGGCGCCCTTGCCGGTGCCGCACCACGCCGGCGTGGGGAGGTACGACACGCGTGGTGGTGGTGGCTACGTGCGAGGCAGCAACTACGTGGCGGCGCCGCCGCCGCCGATGATGCCGGTGGCGGTCCGGTCCGGCCGGCCGGTCTCCCGCGGCGGCGGGGCCCCGCCGTACAACGAGATGCACACGCGGAAGAATGCGACGACGATATGGGATTGATGACCGTACGCCGGAGCTTGCTGACGTTGTGGTTTTTGCAGGGAGAGATGTAAATAGATGGATATGGATCGTGGATGCACGCGGCGTCGCAGTAATCTTGTTAGTAGTTGTTTTTGCTGATGAGAAGAGGTCCAGTTTGCTGTAGAACTATTGTTGTTCACGCTGAGAAAATTATTTAAAACGT ] [+] EMBL CB662936 [ GGAGGGAAATTAGCGGCTCCCAGGCACGGGAGGGACACCGAGAATAGCGCCCCCAAATCCAGGGCCCCGGTCTAAAATCCATCCAGGCAGCCGCCGTCCAATCCCAATCCCAATCCCAATCCTACCTTGTCTTTGTTCTTTCTTCCTCCGACGACGAGGGGAGATTGCTGGTCAGCTCTCTGTCTTCCTTCCTTCCTTCTTTCTTCCTGGTTGGAGGATTGATCAAATCCTGCAAAGGATTAGGTTTTCTTGGGATTGGTGGGTGGTAGTCTTGTCCTCCCCCCAAATCGTTTTTGATTTGATTTGATTTGGGTTGGGTTGGGGTTCATCGAATCAATCATTTCAAGAACAGAGTTATTCTCGGCGGATTTCTTCCACCGTCGTCAGTTCTTGTGTGGATTGTGTCTCTTCCGTTCTGTTTCGGTTTCAGAATCTGCAGTTCGTCGTCGGACCGGTTGTTTCCTGAGTCCCATCTGAGGATAGGTTCAAAATAAATTCAGAATCCAAGCCTGGTTGTCTCCGAGTTGAAGCTATGGCTGCGCGGCCGACGAACGTCGGAGTCCGGGAGCACGACGACCGACGACGACGTGCACCTTTCGCCGACCAGCATCTGCAGCGGCGGCGGGAGGTGGGGCCTGCGTCGTCGTCGGCGGCAGCCGCATCAAGATACTCTGCAGCTTCGGCGGCCGCATCATGCCCCGGCCGTCC GACGGTGCCCTCAAGTACATCGGCGGCGAGACCCGCGGTCCTCGCCGTGCCCCGCTCCATC ] [+] EMBL CB662935 [ GGAGGGAAATTAGCGGCTCCCAGGCACGGGAGGGACACCGAGAATAGCGCCCCCAAATCCAGGGCCCCGGTCTAAAATCCATCCAGGCAGCCGCCGTCCAATCCCAATCCCAATCCCAATCCTACCTTGTCTTTGTTCTTTCTTCCTCCGACGACGAGGGGAGATTGCTGGTCAGCTCTCTGTCTTCCTTCCTTCCTTCTTTCTTCCTGGTTGGAGGATTGATCAAATCCTGCAAAGGATTAGGTTTTCTTGGGATTGGTGGGTGGTAGTCTTGTCCTCCCCCCAAATCGTTTTTGATTTGATTTGATTTGGGTTGGGTTGGGGTTCATCGAATCAATCATTTCAAGAACAGAGTTATTCTCGGCGGATTTCTTCCACCGTCGTCAGTTCTTGTGTGGATTGTGTCTCTTCCGTTCTGTTTCGGTTTCAGAATCTGCAGTTCGTCGTCGGACCGGTTGTTTCCTGAGTCCCATCTGAGGATAGGTTCAAAATAAATTCAGAATCCAAGCCTGGTTGTCTCCGAGTTGAAGCTATGGCTGCGCGGCCGACG ACGTCGGAGTCCGGGAGCACGACGACCGACGACGACGTGCACCTTTCGCCGACCAGCATCTGCAGCGGCGGC GGAGGTGGGGCCTGCGTCGTCGTCGGCGGCAGCCGCATCAAGATACTCTGCAGCTTCGGCGGCCGCATCATGCCCCGGCCGTCC GACGGTGCCCTCAAGTACATCGGCGGCGAGACCCGC GTCCTCGCCGTGCCCCGCTCCATCCCCT ] [+] EMBL AK105306 [ CCCAATCCTACCTTGTCTTTGTTCTTTCTTCCTCCGACGACGAGGGGAGATTGCTGATCAGCTCTCTGTCTTCCTTCCTTCCTTCTTTCTTCCTGGTTGGAGGATTGATCAAATCCTGCAAAGGATTAGGTTTTCTTGGGATTGGTGGGTGGTAGTCTTGTCCTCCCCCCAAATCGTTTTTGATTTGATTTGATTTGGGTTGGGTTGGGGTTCATCGAATCAATCATTTCAAGAACAGAGTTATTCTCGGCGGATTTCTTCCACCGCCGTCAGTTCTTGTGTGGATTGTGTCTCTTCCGTTCTGTTTCGGTTTCAGAATCTGCAGTTCGTCGTCGGACCGGTTGTTTCCTGAGTCCCATCTGAGGATAGGTTCAAAATAAATTCAGAATCCAAGCCTGGTTGTCTCCGAGTTGAAGCTATGGCTGCGCGGCCGACG ACGTCGGAGTCCGGGAGCACGACGACCGACGACGACGTGCACCTTTCGCCGACCAGCATCTGCAGCGGCGGC GGAGGTGGGGCCTGCGTCGTCGTCGGCGGCAGCCGCATCAAGATACTCTGCAGCTTCGGCGGCCGCATCATGCCCCGGCCGTCC GACGGTGCCCTCAAGTACATCGGCGGCGAGACCCGC GTCCTCGCCGTGCCCCGCTCCATCTCCTTCTCCGATTTGAAGAAGAAGGTGGAGGAGATGTTCAGGACGGAGGTGGCGGCCATCAAGTACCAGCTCGTCGCCGAGGACCTCGACGTGCTCGTCTCCGTCACCTGCGACGAGGACCTGACCCACATGCTCGACGAGTACGACCGCTTCGAGGCGAAGCGGTCGCCGTCGGCGTCGCCGCGGTTCCGCGTCTACGTCTTCTCCTCGCAGCCGCCGGTGGCCG CCGCCGTCCCGTCCACCTCCCGCCACGCCGGCTACGCGCCGCCGGCGT CCCACCACCACCTCCTCCAGCACCACCTCCACCACTTCCAGCCGGACCAC TACGTCGCCACGCCCGAC GGGAGCCCGCCG TAC GCC GGACAC TCGCAC GGC GCCGTGTCGGCGGGCAACTCCCCGC GCGCCGACGCCGTGGGCCCCG ACCACCCCGCCGTGTTC GGGCTCAAGATGCAGCGCGT CCGGAGCACGCCGAACCTCGGCAGCCTGGACGCGTCGCCGCAGCACTACCACCAGCACGCCGCGGACGTCGGTGGCGGCGGCGGCGGCATGGCGGGATACATGGGCGGCAGCTCGCCTGTGCACGCCGGCGCCGGCCACCTCGTCTCGCAGGGCGGCTTCCACAGCTACTACCACCCGCACGGGCAGTACGCCCCGGCGCCCGTGCCGGTGCCGCACCACGCCGGCGTGGGGAGGTACGACACGCGTGGTGGTGGTGGCTACGTGCGAGGCAGCAACTACGTGGCGGCGCCGCCGCCGCCGATGATGCCGGTGGCGATCCGGTCCGGCCGGCCGGTCTCCCGCGGCGGCGGGGCCCCGCCGTACAACGAGATGCACACGCCGAAGAATGCGACGACGATATGGGATTGATGACCGTACGCCGGAGCTTGCTGACGTTGTGGTTTTTGCAGGGAGAGATGTAAATAGATGGATATGGATCGTGGATGCACGCGGCGTCGCAGTAATCTTGTTAGTAGTTGTTTTTGCTGATGAGAAGAGGTCCAGTTTGCTGTAGAACTATTGTTGTTCACGCTGAGAAAATTATTTAAAACGT ] [+] EMBL C97349 [ CGTCCNGACGGTGCCCTCAAGTACATCGGCGGCGAGACCCGC GTCCTCGCCGTGCCCCGCTCCATCCCCTTCTCCGATTTGAAGAAGAAGGTGGAGGAGATGTTCAGGACGGAGGTGGCGGCCATCAAGTACCAGCTCGTCGCCGAGGACCTCGACGTGCTCGTCTCCGTCACCTGCGACGAGGACCTGACCCACATGCTCGACGAGTANGACCGCTTCGAGGCGAA CGGTCGCCGTCGG NTCGCCGCGGTTCCGCGTCTACGTCTTCTCCTCGCAGCCGCCGGTGGCCGACCGCCGTCCCGTCCACCTCCCGCCACGCCGGCTACGCGCCGCCGG GTNCCCACCACCACCTCCTCCAGCACCACCTCCACCACTTCCAGCCGGACCACTTACGTCGCCACGCCCGACGGGGAGCCCGCCGTTACGGCCGGGACACTTCGCACGGGCGGCCGTGTCGGGGGGCAACTCCCCGCGGCGCCGAAGCCGTGGGCCCCGAACCANCCCGCCGTGTTCGGGGTTCAAGATGCAGCGCGTTNCGGGAG ] [-] EMBL CB662937 [ C GCGCGGACGCCGTGGGCCCCG TCCACCCCGCCGTGTTC GGGCTCAAGATGCAGCGCGT CCGGAGCACGCCGAACCTCGGCAGCCTGGACGAGTCGCCGCAGCACTACCACCAGCACGCCGCGGACGTCGGTGGCGGCGGCGGCGGCATGGCGGGATACATGGGCGGCAGCTCGCCTGTGCACGCCGGCGCCGGCCACCTCGTCTCGCAGGGCGGCTTCCACAGCTACTACCACCCGCACGGGCAGTACGCCCCGGCGCCCGTGCCGGTGCCGCACCACGCCGGCGTGGGGAGGTACGACACGCGTGGTGGTGGTGGCTACGTGCGAGGCAGCAACTACGTGGCGGCGCCGCCGCCGCCGATGATGCCGGTGGCGGTCCGGTCCGGCCGGCCGGTCTCCCGCGGCGGCGGGGCCCCGCCGTACAACGAGATGCACACGCCGAAGAATGCGACGACGATATGGGATTGATGTCCGTCCGCCGGAGCTTGCTGACGTTGTGGTTTTTGCAGGGAGAGATGTAAATAGATGGATATGGATCGTGGATGCACGCGGCGTCGCAGTAATCTTGTTAGTAGTTGTTTTTGCTGATGAGAAGAGGTCCAGTTTGCTGTAGAACTATTGTTGTTCCCGCTGAGAAAATTATTTAAAACGTTCTTTTTCCCAAATATCAACTGCAAGGTTG] [+] EMBL CF326269 [ ATGGGCGGCAGCTCGCCTGTGCACGCCGGCGCCGGCCACCTCGTCTCGCAGGGCGGCTTCCACAGCTACTACCACCCGCACGGGCAGTACGCCCCGGCGCCCGTGCCGGTGCCGCACCACGCCGGCGTGGGGAGGTACGACACGCGTGGTGGTGGTGGCTACGTGCGAGGCAGCAACTAC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||