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Oryza sativa
cluster # 10165 cluster # 10165       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10165#0 length = 1984 sequences # 7  

consensusID : consensus_10165#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1984
fasta sequence
                              [ATCAGTCCACCCCTTTCCTTCGCTCTCTCTCTCTAACTGCAGATTTCCCTCCCCTTTCAACGCGCGCGCGGGTGGTGGGGGGAGGCACGGCACGAGGCGGAGGCGGCGGAGGAGGTGGTGGGAATCGATCCCTTTCTGTTCCGGCCGCCTCGATCGCCCGCTACCCGCACGCCGCCTTTTCGTCCCGGTGGATTTCTGCCTCCCTTTTCTCGATTCTTTCCTTTTTCTTCTTCTTCTGCATGCGCGGCGGGCTGTGACGCCGACCATGGGGGACGCCTCGGCATCCACCTCCGCGCCCGCGACGCCCACGTCCACGCTCATCTGCCGGGAGGATGGCAACGACCTCTTCTCCGCCGACCCCGCCGACGACGATGGCGGCGGCGGCAGCGGCGGCGACTGGGAGTTATCCATTGCTGACGACGACCATGTGTTGCTCATGGACCGGGACGATGAGTACCTCGCGCTGATGCTGTCCAAGGAGAGGTGTGCCGGCGGCGGCGGCGGCGGCGAGCGTGGGGATGAGGAGGAGGAGGAGATGGTGGAGGAGTGGATGAAGAACGCGCGCGCCTGGTGTGTCGGCTGGATTGTTAAGACGAACGCGGGATTCCGGTTCAGCTTGAAGACGGCGTATGTCGCGGTGACGTATCTCGATCGGTTCTTGGCGCGCCGGTGTGTCGATAGGGACAAGGAGTGGGCGCTGCAGCTCCTCTCGGTGGCGTGCCTGTCGCTGGCGGCG-AAGGTGGAGGAGCGCCGGCCGCCGCGGCTGCCGGAGTTCAAGCTGGACATGTACGACTGCGCGTCCTTGATGCGGATGGAGCTCCTCGTCCTCACCACGCTCAAGTGGCAGATGATCACCGAGACACCCTTCTCCTACCTGAACTGCTTCACCGCGAAATTCCGGCACGACGAGCGGAAGGCGATCGTCCTGCGCGCCATCGAATGCATCTTCGCCTCGATCAAAGTCATTAGCTCGGTGGGGTACCAGCCATCAACGATCGCTCTAGCAGCAATCCTCATCGCTCGGAACAAGGAGACGGCGCCTAATCTAGACGAGCTCAAGTCGGTCGTGGGCTCGTTATGGCAGCAACTAGACACCGGGCATGTGTATTCCTGCTACAACAAGATGATGATTCAAGAGGACAGGTCGATGCAATCGACGACGGAGG-TAGCTTCCTCGGGTGTCTCTGTTG-CCCACATTGGGGGATC-GGAGG-ACAG-CGCCATGGGAGGGGCCAAT-AATGCCACCACC-TTGGAGGCA-ACCCCGG-ACAAGAAGAGGAAAAGGTTGCACTC-GC-CTCAGCGCCAGTAGAGGGAGGAGCTGGAGGCTGGAGCTGGAC-AGCATG--TTGGTTGGAGTCCAGCTCTGCAATTTTTAGTTGATCATTTTCACCCT---TTTTCTTTTGTTTCAGCTGAGCCCTAGT--CAGTGCTCTTGCAAGTTCAGGGGGGGTTGGCCAAATGGAGGGGCCAACATTTGATTCTTCTTCTGATTATGCAATTGTTACAGTTGATTGATTAGTTAGCAATGGAAAGATTCTGGTTTTGTGGAGATCTTTCCCTGGCCCAGAAAGGTACTAGTGTAAAGAGCAGAGGAAAAGGCCTGAAAACTGATAAAGAGCTCTTGCTCAAAGTAGGGAGGAAGTCCTCACTGAGATGTGGAGACAGAGAGAGGGAATCCCAATTCCCAAGTATTGAGTAGAAGTCATTTTTTGTGGATACTGTATGGTTATCTGTTACTCTCTGTTGAGTCATGCCATTTTGGTTCATTAGCAATTTCCTGATGCTAAAGCCAAACAGTGGTAGTACATTTTTGTTGCAAGAACTGATTGATAGTAGTTGGATAGCCAGGGGGCAGGGGCCATCTCTCTCACTGTACTTCACTCTACTCTCTCGTGTCTCGTGTGCAATTGCTGACCATGAGTGGTTGGGAATTGTTTATTGATATCTGTGGGACGAAAGGAAGAAATGCGTTTGCTCGGTGCCAAAAAAAAAAAAA]

[+] EMBL AK070370             [ATCAGTCCACCCCTTTCCTTCGCTCTCTCTCTCTAACTGCAGATTTCCCTCCCCTTTCAACGCGCGCGCGGGTGGTGGGGGGAGGCACGGCACGAGGCGGAGGCGGCGGAGGAGGTGGTGGGAATCGATCCCTTTCTGTTCCGGCCGCCTCGATCGCCCGCTACCCGCACGCCGCCTTTTCGTCCCGGTGGATTTCTGCCTCCCTTTTCTCGATTCTTTCCTTTTTCTTCTTCTTCTGCATGCGCGGCGGGCTGTGACGCCGACCATGGGGGACGCCTCGGCATCCACCTCCGCGCCCGCGACGCCCACGTCCACGCTCATCTGCCGGGAGGATGGCAACGACCTCTTCTCCGCCGACCCCGCCGACGACGATGGCGGCGGCGGCAGCGGCGGCGACTGGGAGTTATCCATTGCTGACGACGACCATGTGTTGCTCATGGACCGGGACGATGAGTACCTCGCGCTGATGCTGTCCAAGGAGAGGTGTGCCGGCGGCGGCGGCGGCGGCGAGCGTGGGGATGAGGAGGAGGAGGAGATGGTGGAGGAGTGGATGAAGAACGCGCGCGCCTGGTGTGTCGGCTGGATTGTTAAGACGAACGCGGGATTCCGGTTCAGCTTGAAGACGGCGTATGTCGCGGTGACGTATCTCGATCGGTTCTTGGCGCGCCGGTGTGTCGATAGGGACAAGGAGTGGGCGCTGCAGCTCCTCTCGGTGGCGTGCCTGTCGCTGGCGGCG AAGGTGGAGGAGCGCCGGCCGCCGCGGCTGCCGGAGTTCAAGCTGGACATGTACGACTGCGCGTCCTTGATGCGGATGGAGCTCCTCGTCCTCACCACGCTCAAGTGGCAGATGATCACCGAGACACCCTTCTCCTACCTGAACTGCTTCACCGCGAAATTCCGGCACGACGAGCGGAAGGCGATCGTCCTGCGCGCCATCGAATGCATCTTCGCCTCGATCAAAGTCATTAGCTCGGTGGGGTACCAGCCATCAACGATCGCTCTAGCAGCAATCCTCATCGCTCGGAACAAGGAGACGGCGCCTAATCTAGACGAGCTCAAGTCGGTCGTGGGCTCGTTATGGCAGCAACTAGACACCGGGCATGTGTATTCCTGCTACAACAAGATGATGATTCAAGAGGACAGGTCGATGCAATCGACGACGGAGG TAGCTTCCTCGGGTGTCTCTGTTG CCCACATTGGGGGATC GGAGG ACAG CGCCATGGGAGGGGCCAAT AATGCCACCACC TTGGAGGCA ACCCCGG ACAAGAAGAGGAAAAGGTTGCACTC GC CTCAGCGCCAGTAGAGGGAGGAGCTGGAGGCTGGAGCTGGAC AGCATG  TTGGTTGGAGTCCAGCTCTGCAATTTTTAGTTGATCATTTTCACCCT   TTTTCTTTTGTTTCAGCTGAGCCCTAGT  CAGTGCTCTTGCAAGTTCAGGGGGGGTTGGCCAAATGGAGGGGCCAACATTTGATTCTTCTTCTGATTATGCAATTGTTACAGTTGATTGATTAGTTAGCAATGGAAAGATTCTGGTTTTGTGGAGATCTTTCCCTGGCCCAGAAAGGTACTAGTGTAAAGAGCAGAGGAAAAGGCCTGAAAACTGATAAAGAGCTCTTGCTCAAAGTAGGGAGGAAGTCCTCACTGAGATGTGGAGGCAGAGAGAGGGAATCCCAATTCCCAAGTATTGAGTAGAAGTCATTTTTTGTGGATACTGTATGGTTATCTGTTACTCTCTGTTGAGTCATGCCATTTTGGTTCATTAGCAATTTCCTGATGCTAAAGCCAAACAGTGGTAGTACATTTTTGTTGCAAGAACTGATTGATAGTAGTTGGATAGCCAGGGGGCAGGGGCCATCTCTCTCACTGT                                                                                                                          ]
[+] EMBL AU082424             [                                                            CGCGCGCGCGGGTGGTGGGGGGAGGCACGGCACGAGGCGGAGGCGGCGGAGGAGGTGGTGGGAATCGATCCCTTTCTGTTCCGGCCGCCTCGATCGCCCGCTACCCGCACGCCGCCTTTTCGTCCCGGTGGATTTCTGCCTCCCTTTTCTCGATTCTTTCCTTTTTCTTCTTCTTCTGCATGCGCGGCGGGCTGTGACGCCGACCATGGGGGACGCCTCGGCATCCACCTCCGCGCCCGCGACGCCCACGTCCACGCTCATCTGCCGGGAGGATGGCAACGACCTCTTCTCCGCCGACCCCGCCGACGACGATGGCGGCGGCGGCAGCGGCGGCGACTGGGAGTTATCCATTGCTGACGACGACCATGTGTTGCTCATGGACCGGGACGATGAGTACCTCGCGCTGATGCTGTCCAAGGAGAGGTGTGCCGGCGGCGGCGGCGGCGGCGAGCGTGGGGATGAGGAGGAGGAGGAGATGGTGGAGGAGTGGATGAAGAACGCGCGCGCCTGGTGTGTCGGCTGGATTGTTAAGACGAACGCGGGATTCCGGTTCAGCTTGAAGACGGCGTATGTCGCGGTGACGTATCTCGATCGGTTCTTGGCGCGCCGGTGTGTCGATAGGGACAAGGAGTGGGCG TGCAG TCCTCTCGGTGGCGTGCCTGTCGCTGGCGGCGAAAGGTGGAGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB644465             [                                                                                                                     GTGGGAATTGATCCCTTTCTGTTCCGGCCGCCTCGATCGCCCGCTACCCGCACGCCGCCTTTTCGTCCCGGTGGATTTCTGCCTCCCTTTTCTCGATTCTTTCCTTTTTCTTCTTCTTCTGCATGCGCGGCGGGCTGTGACGCCGACCATGGGGGACGCCTCGGCATCCACCTCCGCGCCCGCGACGCCCACGTCCACGCTCATCTGCCGGGAGGATGGCAACGACCTCTTCTCCGCCGACCCCGCCTACGACGATGGCGGCGGCGGCAGCGGCGGCGACTGGGAGTTATCCATTGCTGACGACGACCATGTGTTGCTCATGGACCGGGACGATGAGTACCTCGCGCTGATGCTGTCCAAGGAGAGGTGTGCCGGCGGCGGCGGCGGCGGCGAGCGTGGGGATGAGGAGGAGGAGGAGATGGTGGAGGAGTGGATGAAGAACGCGCGCGCCTGGTGTGTCGGCTGGATTGTTAAGACGAACGCGGGATTCCGGTTCAGCTTGAAGACGGCGTATGTCGCGGTGACGTATCTCGATCGGTTCTTGGCGCGCCGGTGTGTCGATATGGACAAAGAGTGGGCGCTGCATCTCCTCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB644466             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CGGTGGGGTACCAGCCATCAACGATCGCTCTAGCAGCAATCCTCATCGCTCGGAACAAGGAGACGGCGCCTAATCTAGACGAGCTCAAGTCGGTCGTGGGCTCGTTATGGCAGCAACTAGACACCGGGCATGTGTATTCCTGCTACAACAAGATGATGATTCAAGAGGACAGGTCGATGCAATCGACGACGGAGG TAGCTTCCTCGGGTGTCTCTGTTG CCCACATTGGGGGATC GGAGG ACAG CGCCATGGGAGGGGCCAAT AATGCCACCACC TTGGAGGCA ACCCCGG ACAAGAAGAGGAAAAGGTTGCACTC GC CTCAGCGCCAGTAGAGGGAGGAGCTGGAGGCTGGAGCTGGAC AGCATG  TTGGTTGGAGTCCAGCTCTGCAATTTTTAGTTGATCATTTTCACCCT   TTTTCTTTTGTTTCAGCTGAGCCCTAGT  CAGTGCTCTTGCAAGTTCAGGGGGGGTTGGCCAAATGGAGGGGCCAACATTTGATTCTTCTTCTGATTATGCAATTGTTACAGTTGATTGATTAGTTAGCAATGGAAAGATTCTGGTTTTGTGGAGATCTTTCCCTGGCCCAGAAAGGTACTAGTGTAAAGAGCAGAGGAAAAGGCCTGAAAACTGATAAAGAGCTCTTGCTCAAAGTAGGGAGGAAGTCCTCACTGAGATGTGGAGACAGAGAGAGGGAATCCCAATTCCCAAGTATTGAGTAGAAGTCATTTTTTGTGGAaaaaaaaaa                                                                                                                                                                                                                                                                               ]
[+] EMBL BI813340             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       acCGGAGGTTAGCTTCCTCGGGTGTCTCTGTTGCCCCACATTGGGGGATCGGGAGG ACAG C CCATGGGA GGGCCAAT AATGCCACCACC TTGGAGGCA ACCCCGG ACAAGAAGAGGAAAAGGTTGCACTC GC CTCAGCGCCAGTAGAGGGAGGAGCTGGAGGCTGGAGCTGGAC AGCATG  TTGGTTGGAGTCCAGCTCTGCAATTTTTAGTTGATCATTTTCACCCTG  TTTTCTTTTGTTTCAGCTGAGCCCTAGT  CAGTGCTCTTGCAAGTTCAGGGGGGGTTGGCCAAATGGAGGGGCCAACATTTGATTCTTCTTCTGATTATGCAATTGTTACAGTTGATTGATTAGTTAGCAATGGAAAGATTCTGGTTTTGTGGAGATCTTT CCTGGCCCAGAAAGGTACTAGTGTAAAGAGCAGAGGAAAAGGCCTGAAAACTGATAAAGAGCTCTTGCTCAAAGTAGGGAGGAAGTCCTCACTGAGATGTGGAGACAGAGAGAGGGAATCCC ATTCCCAAGTATTGAGTAGAAGTCATTTTTTGTGGATAaaaaa                                                                                                                                                                                                                                                                                 ]
[+] EMBL BI802309             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        C GGAGGAACAGCCGCCATGGGAGGCGCCAATAAAGGCCACCACCTTTGGA GCATACCCCGGTACAAGAAGAGGAAAAGGTTGCACTCAGCACTCAGCGCCAGTAGAGGGAGGA CTGGAGGCTGGAGCTGGACAAGCATGGTTTGGTTGGAGTCCAGCTCTGCAATTTTTAGTTGATCATTTTCACCCTGTGTGTTCTTTTGTTTCAGCTGAGCCCTAGTCGCAGTGCTCTTGCAAGTTCAGGGGGGGTT GCCCAATGGAGGGGCCAACATTTGATTCTTCTTCTGATTAT C ATTGTTACAGTTGATTGATTAGTTA C ATGGAAAGATTCTGGTTTTGTGGAGATCTTTCCCTGGCCCAGAAAGGTACTAGTGTAAAGA CAGAGGAAAAGGCCTGAAAACTGATAAAGAGCTCTTGCTCAAAGTAGGGAGGAAGTCCTCACTGAGATGTGGAGACAGAGAGAGGGAATCCCAATTCCCAAGTATTGAGTAGAAGTCATTTTTTGTGGATACTGTATGGTTAaaaa                                                                                                                                                                                                                                                                       ]
[+] EMBL AU056250             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGAGCCCTAGT  CAGTGCTCTTGCAAGTTCAGGGGGGGTTGGCCAAATGGAGGGGCCAACATTTGATTCTTCTTCTGATTATGCAATTGTTACAGTTGATTGATTAGTTAGCAATGGAAAGATTCTGGTTTTGTGGAGATCTTTCCCTGGCCCAGAAAGGTACTAGTGTAAAGAGCAGAGGAAAAGGCCTGAAAACTGATAAAGAGCTCTTGCTCAAAGTAGGGAGGAAGTCCTCACTGAGATGTGGAGACAGAGAGAGGGAATCCCAATTCCCAAGTATTGAGTAGAAGTCATTTTTTGTGGATACTGTATGGTTATCTGTTACTCTCTGTTGAGTCATGCCATTTTGGTTCATTAGCAATTTCCTGATGCTAAAGCCAAACAGTGGTAGTACATTTTTGTTGCAAGAACTGATTGATAGTAGTTGGATAGCCAGGGGGCAGGGGCCATCTCTCTCATTGTACTTCACTCTACTCTCTCGTGTCTCGTGTGCAATTGCTGACCATGAGTGGTTGGGAATTGTTTATTGATATCTGTGGGACGAAAGGAAGAAATGCGTTTGCTCGGTGCCAAAAAAAAAAAAA]


>consensus_10165#0 ATCAGTCCACCCCTTTCCTTCGCTCTCTCTCTCTAACTGCAGATTTCCCTCCCCTTTCAA CGCGCGCGCGGGTGGTGGGGGGAGGCACGGCACGAGGCGGAGGCGGCGGAGGAGGTGGTG GGAATCGATCCCTTTCTGTTCCGGCCGCCTCGATCGCCCGCTACCCGCACGCCGCCTTTT CGTCCCGGTGGATTTCTGCCTCCCTTTTCTCGATTCTTTCCTTTTTCTTCTTCTTCTGCA TGCGCGGCGGGCTGTGACGCCGACCATGGGGGACGCCTCGGCATCCACCTCCGCGCCCGC GACGCCCACGTCCACGCTCATCTGCCGGGAGGATGGCAACGACCTCTTCTCCGCCGACCC CGCCGACGACGATGGCGGCGGCGGCAGCGGCGGCGACTGGGAGTTATCCATTGCTGACGA CGACCATGTGTTGCTCATGGACCGGGACGATGAGTACCTCGCGCTGATGCTGTCCAAGGA GAGGTGTGCCGGCGGCGGCGGCGGCGGCGAGCGTGGGGATGAGGAGGAGGAGGAGATGGT GGAGGAGTGGATGAAGAACGCGCGCGCCTGGTGTGTCGGCTGGATTGTTAAGACGAACGC GGGATTCCGGTTCAGCTTGAAGACGGCGTATGTCGCGGTGACGTATCTCGATCGGTTCTT GGCGCGCCGGTGTGTCGATAGGGACAAGGAGTGGGCGCTGCAGCTCCTCTCGGTGGCGTG CCTGTCGCTGGCGGCGAAGGTGGAGGAGCGCCGGCCGCCGCGGCTGCCGGAGTTCAAGCT GGACATGTACGACTGCGCGTCCTTGATGCGGATGGAGCTCCTCGTCCTCACCACGCTCAA GTGGCAGATGATCACCGAGACACCCTTCTCCTACCTGAACTGCTTCACCGCGAAATTCCG GCACGACGAGCGGAAGGCGATCGTCCTGCGCGCCATCGAATGCATCTTCGCCTCGATCAA AGTCATTAGCTCGGTGGGGTACCAGCCATCAACGATCGCTCTAGCAGCAATCCTCATCGC TCGGAACAAGGAGACGGCGCCTAATCTAGACGAGCTCAAGTCGGTCGTGGGCTCGTTATG GCAGCAACTAGACACCGGGCATGTGTATTCCTGCTACAACAAGATGATGATTCAAGAGGA CAGGTCGATGCAATCGACGACGGAGGTAGCTTCCTCGGGTGTCTCTGTTGCCCACATTGG GGGATCGGAGGACAGCGCCATGGGAGGGGCCAATAATGCCACCACCTTGGAGGCAACCCC GGACAAGAAGAGGAAAAGGTTGCACTCGCCTCAGCGCCAGTAGAGGGAGGAGCTGGAGGC TGGAGCTGGACAGCATGTTGGTTGGAGTCCAGCTCTGCAATTTTTAGTTGATCATTTTCA CCCTTTTTCTTTTGTTTCAGCTGAGCCCTAGTCAGTGCTCTTGCAAGTTCAGGGGGGGTT GGCCAAATGGAGGGGCCAACATTTGATTCTTCTTCTGATTATGCAATTGTTACAGTTGAT TGATTAGTTAGCAATGGAAAGATTCTGGTTTTGTGGAGATCTTTCCCTGGCCCAGAAAGG TACTAGTGTAAAGAGCAGAGGAAAAGGCCTGAAAACTGATAAAGAGCTCTTGCTCAAAGT AGGGAGGAAGTCCTCACTGAGATGTGGAGACAGAGAGAGGGAATCCCAATTCCCAAGTAT TGAGTAGAAGTCATTTTTTGTGGATACTGTATGGTTATCTGTTACTCTCTGTTGAGTCAT GCCATTTTGGTTCATTAGCAATTTCCTGATGCTAAAGCCAAACAGTGGTAGTACATTTTT GTTGCAAGAACTGATTGATAGTAGTTGGATAGCCAGGGGGCAGGGGCCATCTCTCTCACT GTACTTCACTCTACTCTCTCGTGTCTCGTGTGCAATTGCTGACCATGAGTGGTTGGGAAT TGTTTATTGATATCTGTGGGACGAAAGGAAGAAATGCGTTTGCTCGGTGCCAAAAAAAAA AAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)