These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10165#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1984 fasta sequence [ATCAGTCCACCCCTTTCCTTCGCTCTCTCTCTCTAACTGCAGATTTCCCTCCCCTTTCAACGCGCGCGCGGGTGGTGGGGGGAGGCACGGCACGAGGCGGAGGCGGCGGAGGAGGTGGTGGGAATCGATCCCTTTCTGTTCCGGCCGCCTCGATCGCCCGCTACCCGCACGCCGCCTTTTCGTCCCGGTGGATTTCTGCCTCCCTTTTCTCGATTCTTTCCTTTTTCTTCTTCTTCTGCATGCGCGGCGGGCTGTGACGCCGACCATGGGGGACGCCTCGGCATCCACCTCCGCGCCCGCGACGCCCACGTCCACGCTCATCTGCCGGGAGGATGGCAACGACCTCTTCTCCGCCGACCCCGCCGACGACGATGGCGGCGGCGGCAGCGGCGGCGACTGGGAGTTATCCATTGCTGACGACGACCATGTGTTGCTCATGGACCGGGACGATGAGTACCTCGCGCTGATGCTGTCCAAGGAGAGGTGTGCCGGCGGCGGCGGCGGCGGCGAGCGTGGGGATGAGGAGGAGGAGGAGATGGTGGAGGAGTGGATGAAGAACGCGCGCGCCTGGTGTGTCGGCTGGATTGTTAAGACGAACGCGGGATTCCGGTTCAGCTTGAAGACGGCGTATGTCGCGGTGACGTATCTCGATCGGTTCTTGGCGCGCCGGTGTGTCGATAGGGACAAGGAGTGGGCGCTGCAGCTCCTCTCGGTGGCGTGCCTGTCGCTGGCGGCG-AAGGTGGAGGAGCGCCGGCCGCCGCGGCTGCCGGAGTTCAAGCTGGACATGTACGACTGCGCGTCCTTGATGCGGATGGAGCTCCTCGTCCTCACCACGCTCAAGTGGCAGATGATCACCGAGACACCCTTCTCCTACCTGAACTGCTTCACCGCGAAATTCCGGCACGACGAGCGGAAGGCGATCGTCCTGCGCGCCATCGAATGCATCTTCGCCTCGATCAAAGTCATTAGCTCGGTGGGGTACCAGCCATCAACGATCGCTCTAGCAGCAATCCTCATCGCTCGGAACAAGGAGACGGCGCCTAATCTAGACGAGCTCAAGTCGGTCGTGGGCTCGTTATGGCAGCAACTAGACACCGGGCATGTGTATTCCTGCTACAACAAGATGATGATTCAAGAGGACAGGTCGATGCAATCGACGACGGAGG-TAGCTTCCTCGGGTGTCTCTGTTG-CCCACATTGGGGGATC-GGAGG-ACAG-CGCCATGGGAGGGGCCAAT-AATGCCACCACC-TTGGAGGCA-ACCCCGG-ACAAGAAGAGGAAAAGGTTGCACTC-GC-CTCAGCGCCAGTAGAGGGAGGAGCTGGAGGCTGGAGCTGGAC-AGCATG--TTGGTTGGAGTCCAGCTCTGCAATTTTTAGTTGATCATTTTCACCCT---TTTTCTTTTGTTTCAGCTGAGCCCTAGT--CAGTGCTCTTGCAAGTTCAGGGGGGGTTGGCCAAATGGAGGGGCCAACATTTGATTCTTCTTCTGATTATGCAATTGTTACAGTTGATTGATTAGTTAGCAATGGAAAGATTCTGGTTTTGTGGAGATCTTTCCCTGGCCCAGAAAGGTACTAGTGTAAAGAGCAGAGGAAAAGGCCTGAAAACTGATAAAGAGCTCTTGCTCAAAGTAGGGAGGAAGTCCTCACTGAGATGTGGAGACAGAGAGAGGGAATCCCAATTCCCAAGTATTGAGTAGAAGTCATTTTTTGTGGATACTGTATGGTTATCTGTTACTCTCTGTTGAGTCATGCCATTTTGGTTCATTAGCAATTTCCTGATGCTAAAGCCAAACAGTGGTAGTACATTTTTGTTGCAAGAACTGATTGATAGTAGTTGGATAGCCAGGGGGCAGGGGCCATCTCTCTCACTGTACTTCACTCTACTCTCTCGTGTCTCGTGTGCAATTGCTGACCATGAGTGGTTGGGAATTGTTTATTGATATCTGTGGGACGAAAGGAAGAAATGCGTTTGCTCGGTGCCAAAAAAAAAAAAA] [+] EMBL AK070370 [ATCAGTCCACCCCTTTCCTTCGCTCTCTCTCTCTAACTGCAGATTTCCCTCCCCTTTCAACGCGCGCGCGGGTGGTGGGGGGAGGCACGGCACGAGGCGGAGGCGGCGGAGGAGGTGGTGGGAATCGATCCCTTTCTGTTCCGGCCGCCTCGATCGCCCGCTACCCGCACGCCGCCTTTTCGTCCCGGTGGATTTCTGCCTCCCTTTTCTCGATTCTTTCCTTTTTCTTCTTCTTCTGCATGCGCGGCGGGCTGTGACGCCGACCATGGGGGACGCCTCGGCATCCACCTCCGCGCCCGCGACGCCCACGTCCACGCTCATCTGCCGGGAGGATGGCAACGACCTCTTCTCCGCCGACCCCGCCGACGACGATGGCGGCGGCGGCAGCGGCGGCGACTGGGAGTTATCCATTGCTGACGACGACCATGTGTTGCTCATGGACCGGGACGATGAGTACCTCGCGCTGATGCTGTCCAAGGAGAGGTGTGCCGGCGGCGGCGGCGGCGGCGAGCGTGGGGATGAGGAGGAGGAGGAGATGGTGGAGGAGTGGATGAAGAACGCGCGCGCCTGGTGTGTCGGCTGGATTGTTAAGACGAACGCGGGATTCCGGTTCAGCTTGAAGACGGCGTATGTCGCGGTGACGTATCTCGATCGGTTCTTGGCGCGCCGGTGTGTCGATAGGGACAAGGAGTGGGCGCTGCAGCTCCTCTCGGTGGCGTGCCTGTCGCTGGCGGCG AAGGTGGAGGAGCGCCGGCCGCCGCGGCTGCCGGAGTTCAAGCTGGACATGTACGACTGCGCGTCCTTGATGCGGATGGAGCTCCTCGTCCTCACCACGCTCAAGTGGCAGATGATCACCGAGACACCCTTCTCCTACCTGAACTGCTTCACCGCGAAATTCCGGCACGACGAGCGGAAGGCGATCGTCCTGCGCGCCATCGAATGCATCTTCGCCTCGATCAAAGTCATTAGCTCGGTGGGGTACCAGCCATCAACGATCGCTCTAGCAGCAATCCTCATCGCTCGGAACAAGGAGACGGCGCCTAATCTAGACGAGCTCAAGTCGGTCGTGGGCTCGTTATGGCAGCAACTAGACACCGGGCATGTGTATTCCTGCTACAACAAGATGATGATTCAAGAGGACAGGTCGATGCAATCGACGACGGAGG TAGCTTCCTCGGGTGTCTCTGTTG CCCACATTGGGGGATC GGAGG ACAG CGCCATGGGAGGGGCCAAT AATGCCACCACC TTGGAGGCA ACCCCGG ACAAGAAGAGGAAAAGGTTGCACTC GC CTCAGCGCCAGTAGAGGGAGGAGCTGGAGGCTGGAGCTGGAC AGCATG TTGGTTGGAGTCCAGCTCTGCAATTTTTAGTTGATCATTTTCACCCT TTTTCTTTTGTTTCAGCTGAGCCCTAGT CAGTGCTCTTGCAAGTTCAGGGGGGGTTGGCCAAATGGAGGGGCCAACATTTGATTCTTCTTCTGATTATGCAATTGTTACAGTTGATTGATTAGTTAGCAATGGAAAGATTCTGGTTTTGTGGAGATCTTTCCCTGGCCCAGAAAGGTACTAGTGTAAAGAGCAGAGGAAAAGGCCTGAAAACTGATAAAGAGCTCTTGCTCAAAGTAGGGAGGAAGTCCTCACTGAGATGTGGAGGCAGAGAGAGGGAATCCCAATTCCCAAGTATTGAGTAGAAGTCATTTTTTGTGGATACTGTATGGTTATCTGTTACTCTCTGTTGAGTCATGCCATTTTGGTTCATTAGCAATTTCCTGATGCTAAAGCCAAACAGTGGTAGTACATTTTTGTTGCAAGAACTGATTGATAGTAGTTGGATAGCCAGGGGGCAGGGGCCATCTCTCTCACTGT ] [+] EMBL AU082424 [ CGCGCGCGCGGGTGGTGGGGGGAGGCACGGCACGAGGCGGAGGCGGCGGAGGAGGTGGTGGGAATCGATCCCTTTCTGTTCCGGCCGCCTCGATCGCCCGCTACCCGCACGCCGCCTTTTCGTCCCGGTGGATTTCTGCCTCCCTTTTCTCGATTCTTTCCTTTTTCTTCTTCTTCTGCATGCGCGGCGGGCTGTGACGCCGACCATGGGGGACGCCTCGGCATCCACCTCCGCGCCCGCGACGCCCACGTCCACGCTCATCTGCCGGGAGGATGGCAACGACCTCTTCTCCGCCGACCCCGCCGACGACGATGGCGGCGGCGGCAGCGGCGGCGACTGGGAGTTATCCATTGCTGACGACGACCATGTGTTGCTCATGGACCGGGACGATGAGTACCTCGCGCTGATGCTGTCCAAGGAGAGGTGTGCCGGCGGCGGCGGCGGCGGCGAGCGTGGGGATGAGGAGGAGGAGGAGATGGTGGAGGAGTGGATGAAGAACGCGCGCGCCTGGTGTGTCGGCTGGATTGTTAAGACGAACGCGGGATTCCGGTTCAGCTTGAAGACGGCGTATGTCGCGGTGACGTATCTCGATCGGTTCTTGGCGCGCCGGTGTGTCGATAGGGACAAGGAGTGGGCG TGCAG TCCTCTCGGTGGCGTGCCTGTCGCTGGCGGCGAAAGGTGGAGGA ] [+] EMBL CB644465 [ GTGGGAATTGATCCCTTTCTGTTCCGGCCGCCTCGATCGCCCGCTACCCGCACGCCGCCTTTTCGTCCCGGTGGATTTCTGCCTCCCTTTTCTCGATTCTTTCCTTTTTCTTCTTCTTCTGCATGCGCGGCGGGCTGTGACGCCGACCATGGGGGACGCCTCGGCATCCACCTCCGCGCCCGCGACGCCCACGTCCACGCTCATCTGCCGGGAGGATGGCAACGACCTCTTCTCCGCCGACCCCGCCTACGACGATGGCGGCGGCGGCAGCGGCGGCGACTGGGAGTTATCCATTGCTGACGACGACCATGTGTTGCTCATGGACCGGGACGATGAGTACCTCGCGCTGATGCTGTCCAAGGAGAGGTGTGCCGGCGGCGGCGGCGGCGGCGAGCGTGGGGATGAGGAGGAGGAGGAGATGGTGGAGGAGTGGATGAAGAACGCGCGCGCCTGGTGTGTCGGCTGGATTGTTAAGACGAACGCGGGATTCCGGTTCAGCTTGAAGACGGCGTATGTCGCGGTGACGTATCTCGATCGGTTCTTGGCGCGCCGGTGTGTCGATATGGACAAAGAGTGGGCGCTGCATCTCCTCTC ] [-] EMBL CB644466 [ CGGTGGGGTACCAGCCATCAACGATCGCTCTAGCAGCAATCCTCATCGCTCGGAACAAGGAGACGGCGCCTAATCTAGACGAGCTCAAGTCGGTCGTGGGCTCGTTATGGCAGCAACTAGACACCGGGCATGTGTATTCCTGCTACAACAAGATGATGATTCAAGAGGACAGGTCGATGCAATCGACGACGGAGG TAGCTTCCTCGGGTGTCTCTGTTG CCCACATTGGGGGATC GGAGG ACAG CGCCATGGGAGGGGCCAAT AATGCCACCACC TTGGAGGCA ACCCCGG ACAAGAAGAGGAAAAGGTTGCACTC GC CTCAGCGCCAGTAGAGGGAGGAGCTGGAGGCTGGAGCTGGAC AGCATG TTGGTTGGAGTCCAGCTCTGCAATTTTTAGTTGATCATTTTCACCCT TTTTCTTTTGTTTCAGCTGAGCCCTAGT CAGTGCTCTTGCAAGTTCAGGGGGGGTTGGCCAAATGGAGGGGCCAACATTTGATTCTTCTTCTGATTATGCAATTGTTACAGTTGATTGATTAGTTAGCAATGGAAAGATTCTGGTTTTGTGGAGATCTTTCCCTGGCCCAGAAAGGTACTAGTGTAAAGAGCAGAGGAAAAGGCCTGAAAACTGATAAAGAGCTCTTGCTCAAAGTAGGGAGGAAGTCCTCACTGAGATGTGGAGACAGAGAGAGGGAATCCCAATTCCCAAGTATTGAGTAGAAGTCATTTTTTGTGGAaaaaaaaaa ] [+] EMBL BI813340 [ acCGGAGGTTAGCTTCCTCGGGTGTCTCTGTTGCCCCACATTGGGGGATCGGGAGG ACAG C CCATGGGA GGGCCAAT AATGCCACCACC TTGGAGGCA ACCCCGG ACAAGAAGAGGAAAAGGTTGCACTC GC CTCAGCGCCAGTAGAGGGAGGAGCTGGAGGCTGGAGCTGGAC AGCATG TTGGTTGGAGTCCAGCTCTGCAATTTTTAGTTGATCATTTTCACCCTG TTTTCTTTTGTTTCAGCTGAGCCCTAGT CAGTGCTCTTGCAAGTTCAGGGGGGGTTGGCCAAATGGAGGGGCCAACATTTGATTCTTCTTCTGATTATGCAATTGTTACAGTTGATTGATTAGTTAGCAATGGAAAGATTCTGGTTTTGTGGAGATCTTT CCTGGCCCAGAAAGGTACTAGTGTAAAGAGCAGAGGAAAAGGCCTGAAAACTGATAAAGAGCTCTTGCTCAAAGTAGGGAGGAAGTCCTCACTGAGATGTGGAGACAGAGAGAGGGAATCCC ATTCCCAAGTATTGAGTAGAAGTCATTTTTTGTGGATAaaaaa ] [+] EMBL BI802309 [ C GGAGGAACAGCCGCCATGGGAGGCGCCAATAAAGGCCACCACCTTTGGA GCATACCCCGGTACAAGAAGAGGAAAAGGTTGCACTCAGCACTCAGCGCCAGTAGAGGGAGGA CTGGAGGCTGGAGCTGGACAAGCATGGTTTGGTTGGAGTCCAGCTCTGCAATTTTTAGTTGATCATTTTCACCCTGTGTGTTCTTTTGTTTCAGCTGAGCCCTAGTCGCAGTGCTCTTGCAAGTTCAGGGGGGGTT GCCCAATGGAGGGGCCAACATTTGATTCTTCTTCTGATTAT C ATTGTTACAGTTGATTGATTAGTTA C ATGGAAAGATTCTGGTTTTGTGGAGATCTTTCCCTGGCCCAGAAAGGTACTAGTGTAAAGA CAGAGGAAAAGGCCTGAAAACTGATAAAGAGCTCTTGCTCAAAGTAGGGAGGAAGTCCTCACTGAGATGTGGAGACAGAGAGAGGGAATCCCAATTCCCAAGTATTGAGTAGAAGTCATTTTTTGTGGATACTGTATGGTTAaaaa ] [+] EMBL AU056250 [ TGAGCCCTAGT CAGTGCTCTTGCAAGTTCAGGGGGGGTTGGCCAAATGGAGGGGCCAACATTTGATTCTTCTTCTGATTATGCAATTGTTACAGTTGATTGATTAGTTAGCAATGGAAAGATTCTGGTTTTGTGGAGATCTTTCCCTGGCCCAGAAAGGTACTAGTGTAAAGAGCAGAGGAAAAGGCCTGAAAACTGATAAAGAGCTCTTGCTCAAAGTAGGGAGGAAGTCCTCACTGAGATGTGGAGACAGAGAGAGGGAATCCCAATTCCCAAGTATTGAGTAGAAGTCATTTTTTGTGGATACTGTATGGTTATCTGTTACTCTCTGTTGAGTCATGCCATTTTGGTTCATTAGCAATTTCCTGATGCTAAAGCCAAACAGTGGTAGTACATTTTTGTTGCAAGAACTGATTGATAGTAGTTGGATAGCCAGGGGGCAGGGGCCATCTCTCTCATTGTACTTCACTCTACTCTCTCGTGTCTCGTGTGCAATTGCTGACCATGAGTGGTTGGGAATTGTTTATTGATATCTGTGGGACGAAAGGAAGAAATGCGTTTGCTCGGTGCCAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||