cluster # 10168

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Oryza sativa
cluster # 10168 cluster # 10168 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10168#0 length = 1289 sequences # 7
consensusID : consensus_10168#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1289
fasta sequence
                              [AAACGCAAAAGATCCCAAACCCCTAAATCACCCGCTCCCCAGTCCCCACCTCCTCCTCCTCCTCCTCTCGCTGGTGTCTCGGGTGGCGGCGCGGCGCACCACCTCGCGGCGAGATGGCGAGCTCGGCGCTGAGGCGATCCCTCCGACGCCTCCTCCCTTCGAGCCCCCCTCCCCCGTCCCCCGCCTCCGCCGCCGCCGCCGCGACCTTCCGCCGCTCCTTCCTGTCCGGTGGCGGTGACGGGGTGGGAGAGAGCGTGGAAGAATTTGAGAAGAGGATGCTGAGTGGCTTGGATGATGGGCTTGAGAATCGCCGTGGAGGATCTGACTGGGGTTGGAGGGGTGGGTTCCGTAACAGGGGTAACTCTAGCAGCATCTTGGCTGAATTGTGCACGGGCTTCGATTCCTTAGAAGATGGTTTGGATGAGAAGTTGGATGAGGCGTCCCGCACCTTTCATGTGACGGAGGAGTATGA-GGACGATGACTATGATTACAGGCCAGATGTGACTTTCAGGCGAGGCTCAACTTATAATGTCAAGGATCTTGACCTTACAAGACCTGCAGCCGCAAAGAACCCTCCTAGGCCACAGTTTCAAACAACTACAGAGGAGG-TTTTAAAGAAAGCCGATTTTA-GGAATGTTAGATTTCTGGCCAACTTTCTTACAGAAGCT-GGCATTATAATCAAGAGGAGTCAGACTCGTATAAGTGCG-AAAGCTCAGCGTAAGGTTGCAAGAGAGATTAAAACCGCCCGTGCATTGGGGCTATTGCCTTTCACAACAATGGGCCAAAGACCATTCATTTATGGCAGATCTGTGGAGGTGAATCTTTCAGAGGAGGAATATGGTTACGACTTTGTAGATCGGAGGGCAGGTGAGCCTGATGAGAATGCAGACGACGCTGTGCCTGATGAGGACGTTGCGCCTGGTGTGGAGAATGCATAAGCATTTTTCAAGGGCTTGCCATTCTGCAATGCTCTGCATTTCTTCTGTTACTCATTCGACACGGTTCCACATGCCTTCCTGCCTGATAGTCATCTACTCTTGCCCGGATCATAGCCCAGGTTCAATAAATTGTAGTATTTCGCATGTTATGTACACTATAATCTCGGTTTCTGGTTTTGCTTGTTGTGACATGATCAGCAAAATTTTTGGCTTGCTAGTCTCCAGGTTGGAGATCATGTGCCCCACCTAACATTAACATGAAAATGATCCAGACGAGATCCAGTCCTTAATTAATTTTAAGGCAGTCCCAGTAAGTCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK101839             [AAACGCAAAAGATCCCAAACCCCTAAATCACCCGCTCCCCAGTCCCCACCTCCTCCTCCTCCTCCTCTCGCTGGTGTCTCGGGTGGCGGCGCGGCGCACCACCTCGCGGCGAGATGGCGAGCTCGGCGCTGAGGCGATCCCTCCGACGCCTCCTCCCTTCGAGCCCCCCTCCCCCGTCCCCCGCCTCCGCCGCCGCCGCCGCGACCTTCCGCCGCTCCTTCCTGTCCGGTGGCGGTGACGGGGTGGGAGAGAGCGTGGAAGAATTTGAGAAGAGGATGCTGAGTGGCTTGGATGATGGGCTTGAGAATCGCCGTGGAGGATCTGACTGGGGTTGGAGGGGTGGGTTCCGTAACAGGGGTAACTCTAGCAGCATCTTGGCTGAATTGTGCACGGGCTTCGATTCCTTAGAAGATGGTTTGGATGAGAAGTTGGATGAGGCGTCCCGCACCTTTCATGTGACGGAGGAGTATGA GGACGATGACTATGATTACAGGCCAGATGTGACTTTCAGGCGAGGCTGAACTTATAATGTCAAGGATCTTGACCTTACAAGACCTGCAGCCGCAAAGAACCCTCCTAGGCCACAGTTTCAAACAACTACAGAGGAGG TTTTAAAGAAAGCCGATTTTA GGAATGTTAGATTTCTGGCCAACTTTCTTACAGAAGCT GGCATTATAATCAAGAGGAGTCAGACTCGTATAAGTGCG AAAGCTCAGCGTAAGGTTGCAAGAGAGATTAAAACCGCCCGTGCATTGGGGCTATTGCCTTTCACAACAATGGGCCAAAGACCATTCATTTATGGCAGATCTGTGGAGGTGAATCTTTCAGAGGAGGAATATGGTTACGACTTTGTAGATCGGAGGGCAGGTGAGCCTGATGAGAATGCAGACGACGCTGTGCCTGATGAGGACGTTGCGCCTGGTGTGGAGAATGCATAAGCATTTTTCAAGGGCTTGCCATTCTGCAATGCTCTGCATTTCTTCTGTTACTCATTCGACACGGTTCCACATGCCTTCCTGCCTGATAGTCATCTACTCTTGCCCGGATCATAGCCCAGGTTCAATAAATTGTAGTATTTCGCATGTTATGTACACTATAATCTCGGTTTCTGGTTTTGCTTGTTGTGACATGATCAGCAAAATTTTTGGCTTGCTAGTCTCCAGGTTGGAGATCATGTGCCCCACCTAACATTAACATGAAAATGATCCAGACGAGATCCA                                                                     ]
[+] EMBL AU070268             [                                                                                        GCGCGGCGCACCACCTCGCGGCGAGATGGCGAGCTCGGCGCTGAGGCGATCCCTCCGACGCCTCCTCCCTTCGANCCCCCCTCCCCCGTCCCCCGCCTCCGCCGCCGCCGCCGCGACCTTCCGCCGCTCCTTCCTGTCCGGTGGCGGTGACGGGGTGGGAGAGAGCGTGGAAGAATTTGAGAAGAGGATGCTGAGTGGCTTGGATGATGGGCTTGAGAATCGCCGTGGAGGATCTGACTGGGGTTGGAGGGGTGGGTTCCGTAACAGGGGTAACTCTAGCAGCATCTTGGCTGAATTGTGCACGGGCTTCGATTCCTTAGAAGATGGTTTGGATGAGAAGTTGGATGAGGCGTCCCGCACCTTTCATGTGACGGAGGAGTATGAGGGACGATGACTATGATTACAGGCCAGATGTGACTTTCAGGCGAGGNTCAACTTATAATGTNAAGGATCTTGACCTTACAAGACCTGCAGCCGCAAAGAACCCTCCTAGGCCACAGTTTCAAACAACTACAGAGGAGGTTTTTAAAGAAAGCCGATTTTAGGGAATGTTAGATTTCTGGCCAACTTTCTTACAGNAGCTGGGCATTATAATCAAGAGGAGTCAGACTCGTATAAGTGCGAAAAGCTCAGCGTAAGGn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU197668             [                                                                                        GCGCGGCGCACCACCTCGCGGCGAGATGGCGAGCTCGGCGCTGAGGCGATCCCTCCGACGCCTCCTCCCTTCGAGCCCCCCTCCCCCGTCCCCCGCCTCCGCCGCCGCCGCCGCGACCTTCCGCCGCTCCTTCCTGTCCGGTGGCGGTGACGGGGTGGGAGAGAGCGTGGAAGAATTTGAGAAGAGGATGCTGAGTGGCTTGGATGATGGGCTTGAGAATCGCCGTGGAGGATCTGACTGGGGTTGGAGGGGTGGGTTCCGTAACAGGGGTAACTCTAGCAGCATCTTGGCTGAATTGTGCACGGGCTTCGATTCCTTAGAAGATGGTTTGGATGAGAAGTTGGATGAGGCGTCCCGCACCTTTCATGTGACGGAGGAGTATGA GGACGATGACTATGATTACAGGCCAGATGTGACTTTCAGGCGAGGCTCAACTTATAATGTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL OSR29731A            [                                                                                        GCGCGGCGCACCACCTCGCGGCGAGATGGCGAGCTCGGCGCTGAGGCGATCCCTCCGACGCCTCCTCCCTTCGAGCCCCCCTCCCCCGTCCCCCGCCTCCGCCGCCGCCGCCGCGACCTTCCGCCGCTCCTTCCTGTCCGGTGGCGGTGACGGGGTGGGAGAGAGCGTGGAAGAATTTGAGAAGAGGATGCTGAGTGGCTTGGATGATGGGCTTGAGAATCGCCGTGGAGGATCTGACTGGGGTTGGAGGGGTGGGTTCCGTAACAGGGGTAACTCTAGCAGCATCTTGGCTGAATTGTGCACGGGCTTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL OSR29691A            [                                                                                        GCGCGGCGCACCACCTCGCGGCGAGATGGCGAGCTCGGCGCTGAGGCGATCCCTCCGACGCCTCCTCCCTTCGAGCCCCCCTCCCCCGTCCCCCGCCTCCGCCGCCGCCGCCGCGACCTTCCGCCGCTCCTTCCTGTCCGGTGGCGGTGACGGGGTGGGAGAGAGCGTGGAAGAATTTGAGAAGAGGATGCTGAGTGGCTTGGATGATGGGCTTGAGAATCGCCGTGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU183974             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CTGATGAGAATGCAGACGACGCTGTGCCTGATGAGGACGTTGCGCCTGGTGTGGAGAATGCATAAGCATTTTTCAAGGGCTTGCCATTCTGCAATGCTCTGCATTTCTTCTGTTACTCATTCGACACGGTTCCACATGCCTTCCTGCCTGATAGTCATCTACTCTTGCCCGGATCATAGCCCAGGTTCAATAAATTGTAGTATTTCGCATGTTATGTACACTATAATCTCGGTTTCTGGTTTTGCTTGTTGTGACATGATCAGCAAAATTTTTGGCTTGCTAGTCTCCAGGTTGGAGATCATGTGCCCCACCTAACAaaaa                                                                                               ]
[+] EMBL AU173413             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CCGGATCANAGCCCAGGTTCAATAAATTGTAGTATTTCGCATGTTATGTACCCTATAATCTCGGTTTNTGGTTTTGCTTGTTGTGACATGATCAGCAAAATTTTTGGCTTGCTAGTNTCCAGGTTGGAGATCATGTGCCCCCCCTAACATTAACATGAAAATGATCCAGACGAGATCCAGTCCTTAATTAATTTTAAGGCAGTCCCAGTAAGTCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_10168#0
AAACGCAAAAGATCCCAAACCCCTAAATCACCCGCTCCCCAGTCCCCACCTCCTCCTCCT
CCTCCTCTCGCTGGTGTCTCGGGTGGCGGCGCGGCGCACCACCTCGCGGCGAGATGGCGA
GCTCGGCGCTGAGGCGATCCCTCCGACGCCTCCTCCCTTCGAGCCCCCCTCCCCCGTCCC
CCGCCTCCGCCGCCGCCGCCGCGACCTTCCGCCGCTCCTTCCTGTCCGGTGGCGGTGACG
GGGTGGGAGAGAGCGTGGAAGAATTTGAGAAGAGGATGCTGAGTGGCTTGGATGATGGGC
TTGAGAATCGCCGTGGAGGATCTGACTGGGGTTGGAGGGGTGGGTTCCGTAACAGGGGTA
ACTCTAGCAGCATCTTGGCTGAATTGTGCACGGGCTTCGATTCCTTAGAAGATGGTTTGG
ATGAGAAGTTGGATGAGGCGTCCCGCACCTTTCATGTGACGGAGGAGTATGAGGACGATG
ACTATGATTACAGGCCAGATGTGACTTTCAGGCGAGGCTCAACTTATAATGTCAAGGATC
TTGACCTTACAAGACCTGCAGCCGCAAAGAACCCTCCTAGGCCACAGTTTCAAACAACTA
CAGAGGAGGTTTTAAAGAAAGCCGATTTTAGGAATGTTAGATTTCTGGCCAACTTTCTTA
CAGAAGCTGGCATTATAATCAAGAGGAGTCAGACTCGTATAAGTGCGAAAGCTCAGCGTA
AGGTTGCAAGAGAGATTAAAACCGCCCGTGCATTGGGGCTATTGCCTTTCACAACAATGG
GCCAAAGACCATTCATTTATGGCAGATCTGTGGAGGTGAATCTTTCAGAGGAGGAATATG
GTTACGACTTTGTAGATCGGAGGGCAGGTGAGCCTGATGAGAATGCAGACGACGCTGTGC
CTGATGAGGACGTTGCGCCTGGTGTGGAGAATGCATAAGCATTTTTCAAGGGCTTGCCAT
TCTGCAATGCTCTGCATTTCTTCTGTTACTCATTCGACACGGTTCCACATGCCTTCCTGC
CTGATAGTCATCTACTCTTGCCCGGATCATAGCCCAGGTTCAATAAATTGTAGTATTTCG
CATGTTATGTACACTATAATCTCGGTTTCTGGTTTTGCTTGTTGTGACATGATCAGCAAA
ATTTTTGGCTTGCTAGTCTCCAGGTTGGAGATCATGTGCCCCACCTAACATTAACATGAA
AATGATCCAGACGAGATCCAGTCCTTAATTAATTTTAAGGCAGTCCCAGTAAGTCCCAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case