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Oryza sativa
cluster # 10173 cluster # 10173       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10173#0 length = 1597 sequences # 5  
consensus_10173#1 length = 820 sequences # 1  
consensus_10173#2 length = 346 sequences # 1  

consensusID : consensus_10173#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1597
fasta sequence
                              [GGTGGGGAGGAAGCCGCGGGTGTGCGTGCCTGGCGTGCCCAACCACCTGACCTACGCCGACTTCGGCCGCTTCTGCGCATCCTGGGCCTCCCACATCCTCGAGACGCGCATCATCAGGATTGATGGGGTGGAGGATCAGTACGGCGTTCTTATAAAATTCGACACTCAGAGCTTCACGGATAGCTTCTACATGAGCTTTAACGGGAATCGGTTCTCATCACTGGAGGGTAATGTTTGCCGTGTTCGTTTTGTGGAAGACGTTCACTACACTCAA-TTGATTGAGCACGCACATAGCTCAGTTACAAGCTCAGCTGAA-CAACC-TACATG-CCCAGTAT-GTCTTGAA-CGAC-TTGACCAAGATCCTGG-AGGCATTCTTACAACAATATGCAACCATTCTTTCCACTATTCGTGCATGTCAAAGTGGGCAGACTCTTCGTGCCCAGTTTGCAGGTATTGTCAACAAGAACCAGAGAAATCCAGCTGTTCAGTTTGTGGAACATCAGAAAATCTTTGGATTTGTGTAATCTGTGGCCATGTTGGATGTGGAAGGTACAAAGGTGGTCATGCTATTGAACACTGGAAAGAAACGCAACATTGTTATTCACTTGAATTAGAAACACAGAAGGTTTGGGATTATGCTGGGGACAACTATGTGCATCGTTTGATTCAATCGAAAACAGATGGGAATCTGGTTGAGTACAATTTCTATGGTGATCATTCAGTTGATGGTATGTGTTCAACATGCAATGGTGATGCGGGGATCAGTGAAGCTCTGCTCGACAGTAAAATGGAAGCTGTAATGTATTGAGTACATAAAGTTTGTAGATCACTAGCCATACCATCGTAGTACATTTTGTTTTCCATCTCTTACAACTGCGCGCTTTCCCTGCTTTTAGATTGTTGAGGAGTACAATGATCTCGTCACGTCTCAGCTTGAAAAACAAAGAAATTATTACGAATCACTCCTGCTAGAAGTCAAAGAGGATAATGAGAAAGAAATTGCTGCTGCTACCAAGAAAGCAGTGGGCATAAAAGTACA-AAAG-TTACAAGCAAAGCTTGATAAGTGCATGGAAGAGACCGGGTTTCTTAATGATATTCATGAAAATCTTGTAAAAAACATGGAGATGTGGAGGGAGAGAATTCAAAAAGTAAAAGAAAGGGAACAAGCTGCCA-TTAGATTGAAAGATGAAAAAATTGAGAAGCTGGAGGAGGAGCTAAGGGATTTGATAGCCCA-TTTTGAGCGCCAAAATACCGTGGCAGAAGCTTCAGAGTCAATGTCAAGCGATATAAACGGTAGCACAATTCTCTCGGTACCATCTGAATCATCTGCAAGCAGCAACAGCAGCATCAGAAATTAGGATTGAGATTTGTTACCGTAAGCTGTATTTCAGCATCAGAAATTAGTCTGTTACTGGCCTTACCGTACATTCTTTGCTCCCTTATTATCTAATAATGACAGTTATGTGTTACCATGGTTATATACTTGTTGGCTTCTCAAATGCATAGTACAAATCAAGCCTTTGTACAGTGTGTTTTTCTGGACAAAATTCCTTGCCTGTCCATGTCAAGATTTGACTATTTTTCCAAAAAAAAAAAAAAA]

[+] EMBL AK120718             [GGTGGGGAGGAAGCCGCGGGTGTGCGTGCCTGGCGTGCCCAACCACCTGACCTACGCCGACTTCGGCCGCTTCTGCGCATCCTGGGCCTCCCACATCCTCGAGACGCGCATCATCAGGATTGATGGGTTGGAGGATCAGTACGGCGTTCTTATAAAATTCGACACTCAGAGCTTCACGGATAGCTTCTACATGAGCTTTAACGGGAATCGGTTCTCATCACTGGAGGGTAATGTTTGCCGTGTTCGTTTTGTGGAAGACGTTCACTACACTCAA TTGATTGAGCACGCACATAGCTCAGTTACAAGCTCAGCTGAA CAACC TACATG CCCAGTAT GTCTTGAA CGAC TTGACCAAGATCCTGG AGGCATTCTTACAACAATATGCAACCATTCTTTCCACTATTCGTGCATGTCAAAGTGGGCAGACTCTTCGTGCCCAGTTTGCAGGTATTGTCAACAAGAACCAGAGAAATCCAGCTGTTCAGTTTGTGGAACATCAGAAAATCTTTGGATTTGTGTAATCTGTGGCCATGTTGGATGTGGAAGGTACAAAGGTGGTCATGCTATTGAACACTGGAAAGAAACGCAACATTGTTATTCACTTGAATTAGAAACACAGAAGGTTTGGGATTATGCTGGGGACAACTATGTGCATCGTTTGATTCAATCGAAAACAGATGGGAATCTGGTTGAGTACAATTTCTATGGTGATCATTCAGTTGATGGTATGTGTTCAACATGCAATGGTGATGCGGGGATCAGTGAAGCTCTGCTCGACAGTAAAATGGAAGCTGTAATGTATTGAGTACATAAAGTTTGTAGATCACTAGCCATACCATCGTAGTACATTTTGTTTTCCATCTCTTACAACTGCGCGCTTTCCCTGCTTTTAGATTGTTGAGGAGTACAATGATCTCGTCACGTCTCAGCTTGAAAAACAAAGAAATTATTACGAATCACTCCTGCTAGAAGTCAAAGAGGATAATGAGAAAGAAATTGCTGCTGCTACCAAGAAAGCAGTGGGCATAAAAGTACA AAAG TTACAAGCAAAGCTTGATAAGTGCATGGAAGAGACCGGGTTTCTTAATGATATTCATGAAAATCTTGTAAAAAACATGGAGATGTGGAGGGAGAGAATTCAAAAAGTAAAAGAAAGGGAACAAGCTGCCA TTAGATTGAAAGATGAAAAAATTGAGAAGCTGGAGGAGGAGCTAAGGGATTTGATAGCCCA TTTTGAGCGCCAAAATACCGTGGCAGAAGCTTCAGAGTCAATGTCAAGCGATATAAACGGTAGCACAATTCTCTCGGTACCATCTGAATCATCTGCAAGCAGCAACAGCAGCATCAGAAATTAGGATTGAGATTTGTTACCGTAAGCTGTATTTCAGCATCAGAAATTAGTCTGTTACTGGCCTTACCGTACATTCTTTGCTCCCTTATTATCTAATAATGACAGTTATGTGT                                                                                                                                     ]
[+] EMBL CB674234             [GGTGGGGAGGAAGCCGCGGGTGTGCGTGCCTGGCGTGCCCAACCACCTGACCTACGCCGACTTCGGCCGCTTCTGCGCATCCTGGGCCTCCCACATCCTCGAGACGCGCATCATCAGGATTGATGGGGTGGAGGATCAGTACGGCGTTCTTATAAAATTCGACACTCAGAGCTTCACGGATAGCTTCTACATGAGCTTTAACGGGAATCGGTTCTCATCACTGGAGGGTAATGTTTGCCGTGTTCGTTTTGTGGAAGACGTTCACTACACTCAA TTGATTGAGCACGCACATAGCTCAGTTACAAGCTCAGCTGAA CAACC TACATG CCCAGTAT GTCTTGAA CGAC TTGACCAAGATCCTGG AGGCATTCTTACAACAATATGCAACCATTCTTTCCACTATTCGTGCATGTCAAAGTGGGCAGACTCTTCGTGCCCAGTTTGCAGGTATTGTCAACAAGAACCAGAGAAATCCAGCTGTTCAGTTTGTGGAACATCAGAAAATCTTTGGATTTGTGTAATCTGTGGCCATGTTGGATGTGGAAGGTACAAAGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL D42897               [                                                                GGCCGCTTCTGCGCATCCTGGGCCTCCCACATCCTCGAGACGCGCATCATCAGGATTGATGGGGTGGAGGATCAGTACGGCGTTCTTATAAAATTCGACACTCAGAGCTTCACGGATAGCTTCTACATGAGCTTTAACGGGAATCGGTTCTCATCACTGGAGGGTAATGTTTGCCGTGTTCGTTTTGTGGAAGACGTTCACTACACTCAATTTGATTGAGTACGCACATAGCTCAGTTACAAGNTCAGCTGAACCAACCTTACATGCCCCAGTATGGTCTTNAANCGACTTTGACCAAGATCCGGGNGGGNATTNTTACAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BI813504             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TAAAAGTACACAAAGTTTACAAAC AAGCTTGATAAGTGCATGGAAGAGACCGGGTTTCTTAATGATATTCATGAAAATCTTGTAAAAAACATGGAGAT TGGAGGGAGAGAATTCCAAAAGTAAAAGAAAGGGAACAAGCTGCCACTTAGATTGAAAGATGAAAAAATTGAGAAGCTGGAGGAGGAGCTAAGGGATTTGATAGCCCACTTTTGAGCGCC AAAT CCGTGGCAGAAGCTTCAGAGTCAATGTCAAGCGATATAAACGGTAGCACAATTCTCTCGGTACCATCTGAATCATCTGCAAGCAGCAACAGCAGCATCAGAAATTAGGATTGAGATTTGTTACCGTAAGCTGTATTTCAGCATCAGAAATTAGTCTGTTACTGGCCTTACCGTACATTCTTTGCTCCCTTATTATCTAATAATGACAGTTATGTGTTACCATGGTTATATACTTGTTGGCTTCTCAAATGCATAGTACAAATCAAGCCTTTGTACAGTGTGTTTTTCTGGACAAAA                                                     ]
[-] EMBL CA761245             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            aGAGGACGAGACAAGGGGTTTGATAGCCCA TTTTGAGCGCCAAAATACCGTGGCAGAAGCTTTAGAGTCAATGTCAAGCGATATAAACGGTAGCACAATTCTCTCGGTACCATTTGAATCATCTGCAAGCAGCAACAGCAGCATCAGAAATTAGGATTGAGATTTGTTACCGTAAGCTGTATTTCAGCATCAGAAATTAGTCTGTTACTGGCCTTACCGTACATTCTTTGCTCCCTTATTATCTAATAATGACAGTTATGTGTTACCATGGTTATATACTTGTTGGCTTCTCAAATGCATAGTACAAATCAGGCCTTTGTACAGTGTGTTTTTCTGGACAATTTTCCTTGCCTGTCCATGTCAAGATTTGACTATTTTTCCAAAAAAAAAAAAAAA]


>consensus_10173#0 GGTGGGGAGGAAGCCGCGGGTGTGCGTGCCTGGCGTGCCCAACCACCTGACCTACGCCGA CTTCGGCCGCTTCTGCGCATCCTGGGCCTCCCACATCCTCGAGACGCGCATCATCAGGAT TGATGGGGTGGAGGATCAGTACGGCGTTCTTATAAAATTCGACACTCAGAGCTTCACGGA TAGCTTCTACATGAGCTTTAACGGGAATCGGTTCTCATCACTGGAGGGTAATGTTTGCCG TGTTCGTTTTGTGGAAGACGTTCACTACACTCAATTGATTGAGCACGCACATAGCTCAGT TACAAGCTCAGCTGAACAACCTACATGCCCAGTATGTCTTGAACGACTTGACCAAGATCC TGGAGGCATTCTTACAACAATATGCAACCATTCTTTCCACTATTCGTGCATGTCAAAGTG GGCAGACTCTTCGTGCCCAGTTTGCAGGTATTGTCAACAAGAACCAGAGAAATCCAGCTG TTCAGTTTGTGGAACATCAGAAAATCTTTGGATTTGTGTAATCTGTGGCCATGTTGGATG TGGAAGGTACAAAGGTGGTCATGCTATTGAACACTGGAAAGAAACGCAACATTGTTATTC ACTTGAATTAGAAACACAGAAGGTTTGGGATTATGCTGGGGACAACTATGTGCATCGTTT GATTCAATCGAAAACAGATGGGAATCTGGTTGAGTACAATTTCTATGGTGATCATTCAGT TGATGGTATGTGTTCAACATGCAATGGTGATGCGGGGATCAGTGAAGCTCTGCTCGACAG TAAAATGGAAGCTGTAATGTATTGAGTACATAAAGTTTGTAGATCACTAGCCATACCATC GTAGTACATTTTGTTTTCCATCTCTTACAACTGCGCGCTTTCCCTGCTTTTAGATTGTTG AGGAGTACAATGATCTCGTCACGTCTCAGCTTGAAAAACAAAGAAATTATTACGAATCAC TCCTGCTAGAAGTCAAAGAGGATAATGAGAAAGAAATTGCTGCTGCTACCAAGAAAGCAG TGGGCATAAAAGTACAAAAGTTACAAGCAAAGCTTGATAAGTGCATGGAAGAGACCGGGT TTCTTAATGATATTCATGAAAATCTTGTAAAAAACATGGAGATGTGGAGGGAGAGAATTC AAAAAGTAAAAGAAAGGGAACAAGCTGCCATTAGATTGAAAGATGAAAAAATTGAGAAGC TGGAGGAGGAGCTAAGGGATTTGATAGCCCATTTTGAGCGCCAAAATACCGTGGCAGAAG CTTCAGAGTCAATGTCAAGCGATATAAACGGTAGCACAATTCTCTCGGTACCATCTGAAT CATCTGCAAGCAGCAACAGCAGCATCAGAAATTAGGATTGAGATTTGTTACCGTAAGCTG TATTTCAGCATCAGAAATTAGTCTGTTACTGGCCTTACCGTACATTCTTTGCTCCCTTAT TATCTAATAATGACAGTTATGTGTTACCATGGTTATATACTTGTTGGCTTCTCAAATGCA TAGTACAAATCAAGCCTTTGTACAGTGTGTTTTTCTGGACAAAATTCCTTGCCTGTCCAT GTCAAGATTTGACTATTTTTCCAAAAAAAAAAAAAAA



consensusID : consensus_10173#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 820
fasta sequence
                              [CATTGTTATTCACTTGAATAGAAAACACAGAAGGTTTGGGATTATGCTGGGGACAACTATGTGCATCGTTTGATTCAATCGAAAACAGATGGGAATCTGGTTGAGTACAATTTCTATGGTGATCATTCAGTTGATGGTATGTGTTCAACATGCAATGGTGATGCGGGGATCAGTGAAGCTCTGCTCGACAGTAAAATGGAAGCTATTGTTGAGGAGTACAATGATCTCGTCACGTCTCAGCTTGAAAAACAAAGAAATTATTACGAATCACTCCTGCTAGAAGTCAAAGAGGATAATGAGAAAGAAATTGCTGCTGCTACCGAGAAAGCAGTGGGCATAAAAGTACAAAAGTTACAAGCAAAGCTTGATAAGTGCATGGAAGAGACCGGGTTTCTTAATGATATTCATGAAAATCTTGTAAAAAACATGGAGATGTGGAGGGAGAGAATTCAAAAAGTAAAAGAAAGGGAACAAGCTGCCATTAGATTGAAAGATGAAAAAATTGAGAAGCTGGAGGAGGAGCTAAGGGATTTGATAGCCCATTTTGAGCGCCAAAATACCGTGGCAGAAGCTTCAGAGTCAATGTCAAGCGATATAAACGGTAGCACAATTCTCTCGGTACCATCTGAATCATCTGCAAGCAGCAACAGCAGCATCAGAAATTAGGATTGAGATTTGTTACCGTAAGCTGTATTTCAGCATCAGAAATTAGTCTGTTACTGGCCTTACCGTACATTCTTTGCTCCCTTATTATCTAATAATGACAGTTATGTGTTACCATGGTTATATACTTGTTGGCTTCTCAAATGCATAGTACAAA]

[-] EMBL CB674473             [CATTGTTATTCACTTGAATAGAAAACACAGAAGGTTTGGGATTATGCTGGGGACAACTATGTGCATCGTTTGATTCAATCGAAAACAGATGGGAATCTGGTTGAGTACAATTTCTATGGTGATCATTCAGTTGATGGTATGTGTTCAACATGCAATGGTGATGCGGGGATCAGTGAAGCTCTGCTCGACAGTAAAATGGAAGCTATTGTTGAGGAGTACAATGATCTCGTCACGTCTCAGCTTGAAAAACAAAGAAATTATTACGAATCACTCCTGCTAGAAGTCAAAGAGGATAATGAGAAAGAAATTGCTGCTGCTACCGAGAAAGCAGTGGGCATAAAAGTACAAAAGTTACAAGCAAAGCTTGATAAGTGCATGGAAGAGACCGGGTTTCTTAATGATATTCATGAAAATCTTGTAAAAAACATGGAGATGTGGAGGGAGAGAATTCAAAAAGTAAAAGAAAGGGAACAAGCTGCCATTAGATTGAAAGATGAAAAAATTGAGAAGCTGGAGGAGGAGCTAAGGGATTTGATAGCCCATTTTGAGCGCCAAAATACCGTGGCAGAAGCTTCAGAGTCAATGTCAAGCGATATAAACGGTAGCACAATTCTCTCGGTACCATCTGAATCATCTGCAAGCAGCAACAGCAGCATCAGAAATTAGGATTGAGATTTGTTACCGTAAGCTGTATTTCAGCATCAGAAATTAGTCTGTTACTGGCCTTACCGTACATTCTTTGCTCCCTTATTATCTAATAATGACAGTTATGTGTTACCATGGTTATATACTTGTTGGCTTCTCAAATGCATAGTACAAA]


>consensus_10173#1 CATTGTTATTCACTTGAATAGAAAACACAGAAGGTTTGGGATTATGCTGGGGACAACTAT GTGCATCGTTTGATTCAATCGAAAACAGATGGGAATCTGGTTGAGTACAATTTCTATGGT GATCATTCAGTTGATGGTATGTGTTCAACATGCAATGGTGATGCGGGGATCAGTGAAGCT CTGCTCGACAGTAAAATGGAAGCTATTGTTGAGGAGTACAATGATCTCGTCACGTCTCAG CTTGAAAAACAAAGAAATTATTACGAATCACTCCTGCTAGAAGTCAAAGAGGATAATGAG AAAGAAATTGCTGCTGCTACCGAGAAAGCAGTGGGCATAAAAGTACAAAAGTTACAAGCA AAGCTTGATAAGTGCATGGAAGAGACCGGGTTTCTTAATGATATTCATGAAAATCTTGTA AAAAACATGGAGATGTGGAGGGAGAGAATTCAAAAAGTAAAAGAAAGGGAACAAGCTGCC ATTAGATTGAAAGATGAAAAAATTGAGAAGCTGGAGGAGGAGCTAAGGGATTTGATAGCC CATTTTGAGCGCCAAAATACCGTGGCAGAAGCTTCAGAGTCAATGTCAAGCGATATAAAC GGTAGCACAATTCTCTCGGTACCATCTGAATCATCTGCAAGCAGCAACAGCAGCATCAGA AATTAGGATTGAGATTTGTTACCGTAAGCTGTATTTCAGCATCAGAAATTAGTCTGTTAC TGGCCTTACCGTACATTCTTTGCTCCCTTATTATCTAATAATGACAGTTATGTGTTACCA TGGTTATATACTTGTTGGCTTCTCAAATGCATAGTACAAA



consensusID : consensus_10173#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 346
fasta sequence
                              [AAAGAAAGGGACACANAGCTCGCCACATTAGATTGAAAGATGTAATAAAATTGAGAAGCTGGAGGAGGAGCTAAGGGATTTGTATACGCCCCTTTTGAGCCCCCAAAATCCCGCTGCCAGAAGCCTTCCAGAGTCAATGTCCACAGCCGATATAAACCGGTAGCCACCAATTCTCTCGGTACCACTCTGAATCATCTGCCAACCAGCCAACCACGCCAGCCATCTAGAAATTAGGATTGAGATTTGTTACCGCTAAGCCTGTATTTCACATCAGAAATTAGTCTGTTACTGCCCTTACCGTACATTCTTTGCTCCCTTATTATCTAATAATACNCTTATGTGTTAA]

[+] EMBL BM038338             [AAAGAAAGGGACACANAGCTCGCCACATTAGATTGAAAGATGTAATAAAATTGAGAAGCTGGAGGAGGAGCTAAGGGATTTGTATACGCCCCTTTTGAGCCCCCAAAATCCCGCTGCCAGAAGCCTTCCAGAGTCAATGTCCACAGCCGATATAAACCGGTAGCCACCAATTCTCTCGGTACCACTCTGAATCATCTGCCAACCAGCCAACCACGCCAGCCATCTAGAAATTAGGATTGAGATTTGTTACCGCTAAGCCTGTATTTCACATCAGAAATTAGTCTGTTACTGCCCTTACCGTACATTCTTTGCTCCCTTATTATCTAATAATACNCTTATGTGTTAA]


>consensus_10173#2 AAAGAAAGGGACACANAGCTCGCCACATTAGATTGAAAGATGTAATAAAATTGAGAAGCT GGAGGAGGAGCTAAGGGATTTGTATACGCCCCTTTTGAGCCCCCAAAATCCCGCTGCCAG AAGCCTTCCAGAGTCAATGTCCACAGCCGATATAAACCGGTAGCCACCAATTCTCTCGGT ACCACTCTGAATCATCTGCCAACCAGCCAACCACGCCAGCCATCTAGAAATTAGGATTGA GATTTGTTACCGCTAAGCCTGTATTTCACATCAGAAATTAGTCTGTTACTGCCCTTACCG TACATTCTTTGCTCCCTTATTATCTAATAATACNCTTATGTGTTAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10173#0      GGTGGGGAGGAAGCCGCGGGTGTGCGTGCCTGGCGTGCCCAACCACCTGACCTACGCCGA 60
consensus_10173#1      ------------------------------------------------------------
consensus_10173#2      ------------------------------------------------------------
                                                                                   

consensus_10173#0      CTTCGGCCGCTTCTGCGCATCCTGGGCCTCCCACATCCTCGAGACGCGCATCATCAGGAT 120
consensus_10173#1      ------------------------------------------------------------
consensus_10173#2      ------------------------------------------------------------
                                                                                   

consensus_10173#0      TGATGGGGTGGAGGATCAGTACGGCGTTCTTATAAAATTCGACACTCAGAGCTTCACGGA 180
consensus_10173#1      ------------------------------------------------------------
consensus_10173#2      ------------------------------------------------------------
                                                                                   

consensus_10173#0      TAGCTTCTACATGAGCTTTAACGGGAATCGGTTCTCATCACTGGAGGGTAATGTTTGCCG 240
consensus_10173#1      ------------------------------------------------------------
consensus_10173#2      ------------------------------------------------------------
                                                                                   

consensus_10173#0      TGTTCGTTTTGTGGAAGACGTTCACTACACTCAATTGATTGAGCACGCACATAGCTCAGT 300
consensus_10173#1      ------------------------------------------------------------
consensus_10173#2      ------------------------------------------------------------
                                                                                   

consensus_10173#0      TACAAGCTCAGCTGAACAACCTACATGCCCAGTATGTCTTGAACGACTTGACCAAGATCC 360
consensus_10173#1      ------------------------------------------------------------
consensus_10173#2      ------------------------------------------------------------
                                                                                   

consensus_10173#0      TGGAGGCATTCTTACAACAATATGCAACCATTCTTTCCACTATTCGTGCATGTCAAAGTG 420
consensus_10173#1      ------------------------------------------------------------
consensus_10173#2      ------------------------------------------------------------
                                                                                   

consensus_10173#0      GGCAGACTCTTCGTGCCCAGTTTGCAGGTATTGTCAACAAGAACCAGAGAAATCCAGCTG 480
consensus_10173#1      ------------------------------------------------------------
consensus_10173#2      ------------------------------------------------------------
                                                                                   

consensus_10173#0      TTCAGTTTGTGGAACATCAGAAAATCTTTGGATTTGTGTAATCTGTGGCCATGTTGGATG 540
consensus_10173#1      ------------------------------------------------------------
consensus_10173#2      ------------------------------------------------------------
                                                                                   

consensus_10173#0      TGGAAGGTACAAAGGTGGTCATGCTATTGAACACTGGAAAGAAACGCAACATTGTTATTC 600
consensus_10173#1      -------------------------------------------------CATTGTTATTC 11
consensus_10173#2      ------------------------------------------------------------
                                                                                   

consensus_10173#0      ACTTGAATTAGAAACACAGAAGGTTTGGGATTATGCTGGGGACAACTATGTGCATCGTTT 660
consensus_10173#1      ACTTGAATAGAAAACACAGAAGGTTTGGGATTATGCTGGGGACAACTATGTGCATCGTTT 71
consensus_10173#2      ------------------------------------------------------------
                                                                                   

consensus_10173#0      GATTCAATCGAAAACAGATGGGAATCTGGTTGAGTACAATTTCTATGGTGATCATTCAGT 720
consensus_10173#1      GATTCAATCGAAAACAGATGGGAATCTGGTTGAGTACAATTTCTATGGTGATCATTCAGT 131
consensus_10173#2      ------------------------------------------------------------
                                                                                   

consensus_10173#0      TGATGGTATGTGTTCAACATGCAATGGTGATGCGGGGATCAGTGAAGCTCTGCTCGACAG 780
consensus_10173#1      TGATGGTATGTGTTCAACATGCAATGGTGATGCGGGGATCAGTGAAGCTCTGCTCGACAG 191
consensus_10173#2      ------------------------------------------------------------
                                                                                   

consensus_10173#0      TAAAATGGAAGCTGTAATGTATTGAGTACATAAAGTTTGTAGATCACTAGCCATACCATC 840
consensus_10173#1      TAAAATGGAAGCT----------------------------------------------- 204
consensus_10173#2      ------------------------------------------------------------
                                                                                   

consensus_10173#0      GTAGTACATTTTGTTTTCCATCTCTTACAACTGCGCGCTTTCCCTGCTTTTAGATTGTTG 900
consensus_10173#1      -----------------------------------------------------ATTGTTG 211
consensus_10173#2      ------------------------------------------------------------
                                                                                   

consensus_10173#0      AGGAGTACAATGATCTCGTCACGTCTCAGCTTGAAAAACAAAGAAATTATTACGAATCAC 960
consensus_10173#1      AGGAGTACAATGATCTCGTCACGTCTCAGCTTGAAAAACAAAGAAATTATTACGAATCAC 271
consensus_10173#2      ------------------------------------------------------------
                                                                                   

consensus_10173#0      TCCTGCTAGAAGTCAAAGAGGATAATGAGAAAGAAATTGCTGCTGCTACCAAGAAAGCAG 1020
consensus_10173#1      TCCTGCTAGAAGTCAAAGAGGATAATGAGAAAGAAATTGCTGCTGCTACCGAGAAAGCAG 331
consensus_10173#2      ------------------------------------------------------------
                                                                                   

consensus_10173#0      TGGGCATAAAAGTACAAAAGTTACAAGCAAAGCTTGATAAGTGCATGGAAGAGACCGGGT 1080
consensus_10173#1      TGGGCATAAAAGTACAAAAGTTACAAGCAAAGCTTGATAAGTGCATGGAAGAGACCGGGT 391
consensus_10173#2      ------------------------------------------------------------
                                                                                   

consensus_10173#0      TTCTTAATGATATTCATGAAAATCTTGTAAAAAACATGGAGATGTGGAGGGAGAGAATTC 1140
consensus_10173#1      TTCTTAATGATATTCATGAAAATCTTGTAAAAAACATGGAGATGTGGAGGGAGAGAATTC 451
consensus_10173#2      ------------------------------------------------------------
                                                                                   

consensus_10173#0      AAAAAGTAAAAGAAAGGGAACAAGCTGCCATTAGATTGAAAGATGAAA--AAATTGAGAA 1198
consensus_10173#1      AAAAAGTAAAAGAAAGGGAACAAGCTGCCATTAGATTGAAAGATGAAA--AAATTGAGAA 509
consensus_10173#2      --AAAGAAAGGGACACANAGCTCGCCAC-ATTAGATTGAAAGATGTAATAAAATTGAGAA 57
                         **** **  ** *   * *  **  * **************** **  **********

consensus_10173#0      GCTGGAGGAGGAGCTAAGGGATTTG-ATA-GCCCATTTTGAGCGCC-AAAATACCG-TGG 1254
consensus_10173#1      GCTGGAGGAGGAGCTAAGGGATTTG-ATA-GCCCATTTTGAGCGCC-AAAATACCG-TGG 565
consensus_10173#2      GCTGGAGGAGGAGCTAAGGGATTTGTATACGCCCCTTTTGAGCCCCCAAAATCCCGCTGC 117
                       ************************* *** **** ******** ** ***** *** ** 

consensus_10173#0      CAGAAGCTT--CAGAGTCAATGTC---AAGCGATATAAAC-GGTAGCA--CAATTCTCTC 1306
consensus_10173#1      CAGAAGCTT--CAGAGTCAATGTC---AAGCGATATAAAC-GGTAGCA--CAATTCTCTC 617
consensus_10173#2      CAGAAGCCTTCCAGAGTCAATGTCCACAGCCGATATAAACCGGTAGCCACCAATTCTCTC 177
                       ******* *  *************   *  ********** ******   **********

consensus_10173#0      GGTACCA-TCTGAATCATCTGCAAGC-----AGCAACAGCAGC-ATC-AGAAATTAGGAT 1358
consensus_10173#1      GGTACCA-TCTGAATCATCTGCAAGC-----AGCAACAGCAGC-ATC-AGAAATTAGGAT 669
consensus_10173#2      GGTACCACTCTGAATCATCTGCCAACCAGCCAACCACGCCAGCCATCTAGAAATTAGGAT 237
                       ******* ************** * *     * * **  **** *** ************

consensus_10173#0      TGAGATTTGTTACCG-TAAGC-TGTATTTCAGCATCAGAAATTAGTCTGTTACTGGCCTT 1416
consensus_10173#1      TGAGATTTGTTACCG-TAAGC-TGTATTTCAGCATCAGAAATTAGTCTGTTACTGGCCTT 727
consensus_10173#2      TGAGATTTGTTACCGCTAAGCCTGTATTTCA-CATCAGAAATTAGTCTGTTACTGCCCTT 296
                       *************** ***** ********* *********************** ****

consensus_10173#0      ACCGTACATTCTTTGCTCCCTTATTATCTAATAATGACAGTTATGTGTTACCATGGTTAT 1476
consensus_10173#1      ACCGTACATTCTTTGCTCCCTTATTATCTAATAATGACAGTTATGTGTTACCATGGTTAT 787
consensus_10173#2      ACCGTACATTCTTTGCTCCCTTATTATCTAATAAT-ACNCTTATGTGTTAA--------- 346
                       *********************************** **  **********          

consensus_10173#0      ATACTTGTTGGCTTCTCAAATGCATAGTACAAATCAAGCCTTTGTACAGTGTGTTTTTCT 1536
consensus_10173#1      ATACTTGTTGGCTTCTCAAATGCATAGTACAAA--------------------------- 820
consensus_10173#2      ------------------------------------------------------------
                                                                                   

consensus_10173#0      GGACAAAATTCCTTGCCTGTCCATGTCAAGATTTGACTATTTTTCCAAAAAAAAAAAAAA 1596
consensus_10173#1      ------------------------------------------------------------
consensus_10173#2      ------------------------------------------------------------
                                                                                   

consensus_10173#0      A 1597
consensus_10173#1      -
consensus_10173#2      -
                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)