cluster # 10176

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Oryza sativa
cluster # 10176 cluster # 10176 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10176#0 length = 1523 sequences # 7
consensusID : consensus_10176#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1523
fasta sequence
                              [CGTAGGTCGCGGAGACCAACCCACCCATCCCTCGCGCCGGAAGAGAGGTACATGGCCTGGTGCGCCGCGCGCAGCCGCCTCCTCCCCCTCGCCACCGCGCCGCAGCTGCTCCGCCGCCTCCTCCTCTCCTCCGCTGCGGCCCCGCGCTACGCGCACCCCCACCACCACCACAGCAACAGCCGCCGCCGCCGCCGCCCCCTCGCCCCCACCGTCTACGCCGCTGCCGCGGCAGCCGCAGCCGAGGCGCCGCTCCCCATGCCGCCGCGCATCGGCCGCGCCACGCGGCACCCCGGGGGCGCCGCCTCCGTGGCGCGCGTCTACGCCGACGCCAACTCCCAGCGGCCCAAGGAGTACTGGGACTACGAGTCGCTCGACATCGAATGGGGGGAGCAGGATGGGTACGAGGTGCTGCGCAAGCTTGGGAGGGGGAAGTACAGCGAGGTGTTCGAGGGATTCCGGCCCGGGGGTGACGAGAGGAGCGTTATTAAGATCCTCAAGCCCGTCAAGAAGAAAAAGATAAAGAGGGAAATAGAGATACTTCAAAACTTATATGGCGGACCGAATATTGTAAAGCTACTTGATGTTGTCAGGGATGATGAATCGAAGACACCTAGTTTGATCTTTGAATATGTCAACAATACTGATTTCAAAGTACTCTACCCAACACTATTGGATTACGATATCAGATA-CTACATTTACGAATTATTAAAGGCACTAGATTATTGTCATTCACGAGGCATCATGCATCGAGATGTCAAACCTCACAATATCATGATTGATCATGAGAAACGCCAGC-TTTGTCTTATTGATTGGGGTCTAGCAGAGTTCTATCATCCCAAGATGGAATATAATGCTAGAGTTGCTTCAAGATCTTATAAGGGCCCTGAACTTCTTGTGGATTTGCTAGATTATGATTACTCGTTGGATTTGTGGAGCCTTGGTTGCATGTTTGCCGCAATGATATTCCGAGTCGACCCTTTCTTTAATGGTCAGGATAACTACGACCAATTAGTCAAAATTACCGAGGTTCTTGGAACAGAAGATTTCTACAATTACCTTGAAAAGTATGGTCTTGAGCTTGACCCGCAGCTTGAAAGACTTGTTGGAAGACATAATAGGAAGCCATGGTCAATGTTTGTTAACTCGGGGAACAGACACCTAGCAAGCCCTGAGGCTATTGATTTTGTAGACAGGTTGCTTCGCTACGATCACCAGGAAAGGCCTACAGCAAAGGAAGCCATGGCTCATCCATATTTCAATCCAGTGAGAAGCACTTAAAACGGCAGGAAGAGTGCCCAATAGTGGTATGCGGCATATTTGACAATTTTTGCTACGGTGTCAAATATATAGAGGGAATTTAATTTTCAAGGCTGTATGGTTTATCCAGAATAAATCCTTGACCAACATGTAACCGTCACATCATTTGTGTGAATTAATTCATTCCTCTCTGCTAACTTGTTTTATGATCAGTTTTTATCAATAATAATTCATCTCTGCACTTTCATCCCCAAAAAAAAAAGGAG]

[+] EMBL AK120812             [CGTAGGTCGCGGAGACCAACCCACCCATCCCTCGCGCCGGAAGAGAGGTACATGGCCTGGTGCGCCGCGCGCAGCCGCCTCCTCCCCCTCGCCACCGCGCCGCAGCTGCTCCGCCGCCTCCTCCTCTCCTCCGCTGCGGCCCCGCGCTACGCGCACCCCCACCACCACCACAGCAACAGCCGCCGCCGCCGCCGCCCCCTCGCCCCCACCGTCTACGCCGCTGCCGCGGCAGCCGCAGCCGAGGCGCCGCTCCCCATGCCGCCGCGCATCGGCCGCGCCACGCGGCACCCCGGGGGCGCCGCCTCCGTGGCGCGCGTCTACGCCGACGCCAACTCCCAGCGGCCCAAGGAGTACTGGGACTACGAGTCGCTCGACATCGAATGGGGGGAGCAGGATGGGTACGAGGTGCTGCGCAAGCTTGGGAGGGGGAAGTACAGCGAGGTGTTCGAGGGATTCCGGCCCGGGGGTGACGAGAGGTGCGTTATTAAGATCCTCAAGCCCGTCAAGAAGAAAAAGATAAAGAGGGAAATAAAGATACTTCAAAACTTATATGGCGGACCGAATATTGTAAAGCTACTTGATGTTGTCAGGGATGATGAATCGAAGACACCTAGTTTGATCTTTGAATATGTCAACAATACTGATTTCAAAGTACTCTACCCAACACTATTGGATTACGATATCAGATA CTACATTTACGAATTATTAAAGGCACTAGATTATTGTCATTCACGAGGCATCATGCATCGAGATGTCAAACCTCACAATATCATGATTGATCATGAGAAACGCCAGC TTTGTCTTATTGATTGGGGTCTAGCAGAGTTCTATCATCCCAAGATGGAATATAATGCTAGAGTTGCTTCAAGATCTTATAAGGGCCCTGAACTTCTTGTGGATTTGCTAGATTATGATTACTCGTTGGATTTGTGGAGCCTTGGTTGCATGTTTGCCGCAATGATATTCCGAGTCGACCCTTTCTTTAATGGTCAGGATAACTACGACCAATTAGTCAAAATTACCGAGGTTCTTGGAACAGAAGATTTCTACAATTACCTTGAAAAGTATGGTCTTGAGCTTGACCCGCAGCTTGAAAGACTTGTTGGAAGACATAATAGGAAGCCATGGTCAATGTTTGTTAACTCGGGGAACAGACACCTAGCAAGCCCTGAGGCTATTGATTTTGTAGACAGGTTGCTTCGCTACGATCACCAGGAAAGGCCTACAGCAAAGGAAGCCATGGCTCATCCATATTTCAATCCAGTGAGAAGCACTTAAAACGGCAGGAAGAGTGCCCAATAGTGGTATGCGGCATATTTGACAATTTTTGCTACGGTGTCAAATATATAGAGGGAATTTAATTTTCAAGGCTGTATGGTTTATCCAGAATAAATCCTTGACCAACATGTAACCGTCACATCATTTGTGTGAATTAATTCATTCCTCTCTGCTAACTTGTTTTATGATCAGTTTTTATCAATAATAATTCATCTCTGCAC                        ]
[+] EMBL CB649837             [                 AACCCACCCATCCCTCGCGCCGGAAGAGAGGTACATGGCCTGGTGCGCCGCGCGCAGCCGCCTCCTCCCCCTCGCCACCGCGCCGCAGCTGCTCCGCCGCCTCCTCCTCTCCTCCGCTGCGGCCCCGCGCTACGCGCACCCCCACCACCACCACAGCAACAGCCGCCGCCGCCGCCGCCCCCTCGCCCCCACCGTCTACGCCGCTGCCGCGGCAGCCGCAGCCGAGGCGCCGCTCCCCATGCCGCCGCGCATCGGCCGCGCCACGCGGCACCCCGGGGGCGCCGCCTCCGTGGCGCGCGTCTACGCCGACGCCAACTCCCAGCGGCCCAAGGAGTACTGGGACTACGAGTCGCTCGACATCGAATGGGGGGAGCATGATGGGTACGAGGTGCTGCTCAAGCTTGGGAGGGGGAAGTACAGCGAGGTGTTCGAGGGATTCCGGCCCGGGGGTGACGAGAGGAGCGTTATTAAGATCCTCAAGCCCGTCAAGAAGAAAAAGATAAAGAGGGAAATAGAGATACTTCGAAACTTATATGGCGGACCGAATATTGTAAAGCTACTTGATGTTGTCAGGGATGATGAATCGAAGACACCTAGTTTGATCTTTGAATATGTCAACAATACTGATTTCAAAGTACTCTACCCAACACTATTGGATTACGATATCAGATACCTACATTTACGAATTATTACAGGCACTAGATTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB648388             [                 AACCCACCCATCCCTCGCGCCGGAAGAGAGGTACATGGCCTGGTGCGCCGCGCGCAGCCGCCTCCTCCCCCTCGCCACCGCGCCGCAGCTGCTCCGCCGCCTCCTCCTCTCCTCCGCTGCGGCCCCGCGCTACGCGCACCCCCACCACCACCACAGCAACAGCCGCCGCCGCCGCCGCCCCCTCGCCCCCAGCGTCTACGCCGCTGCCGCGGCAGCCGCAGCCGAGGCGCCGCTCCCCATGCCGCCGCGCATCGGCCGCGCCACGCGGCACCCCGGGGGCGCCGCCTCCGTGGCGCGCGTCTACGCCGACGCCAACTCCCAGCGGCCCAAGGAGTACTGGGACTACGAGTCGCTCGACATCGAATGGGGGGAGCAGGATGGGTACGAGGTGCTGCGCAAGCTTGGGAGGGGGAAGTACAGCGAGGTGTTCGAGGGATTCCGGCCCGGGGGTGACGAGAGGAGCCTTATTAAGATCCTCAAGCCCGTCAAGAAGAAAACGATACAGAGGGAAATAGGGATACTTCAAAACTTATATGGCGGACCGAATATTGTAAAGCTACTTGATGTTGTCAGGGATGATGAATCGAAGACACCTAGTTTGATCTTTGAATATGTCAACAATACTGATTTCAAAGTACTCTACCCAACACTATTGGATTACGATATCAGATA CTACATTTACGAATTATTAAAGGCACTAGATTATTGTCATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB649838             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTGATCATGAGAAACGCCAGCTTTTGTCTTATTGATTGGGGTCTAGCAGAGTTCTATCATCCCAAGATGGAATATAATGCTAGAGTTGCTTCAAGATCTTATAAGGGCCCTGAACTTCTTGTGGATTTGCTAGATTATGATTACTCGTTGGATTTGTGGAGCCTTGGTTGCATGTTTGCCGCAATGATATTCCGAGTCGACCCTTTCTTTAATGGTCAGGATAACTACGACCAATTAGTCAAAATTACCGAGGTTCTTGGAACAGAAGATTTCTACAATTACCTTGAAAAGTATGGTCTTGAGCTTGACCCGCAGCTTGAAAGACTTGTTGGAAGACATAATAGGAAGCCATGGTCAATGTTTGTTAACTCGGGGAACAGACACCTAGCAAGCCCTGAGGCTATTGATTTTGTAGACAGGTTGCTTCGCTACGATCACCAGGAAAGGCCTACAGCAAAGGAAGCCATGGCTCATCCATATTTCAATCCAGTGAGAAGCACTTAAAACGGCAGGAAGAGTGCCCAATAGTGGTATGCGGCATATTTGACAATTTTTGCTACGGTGTCAAATATATAGAGGGAATTTAATTTTCAAGGCTGTATGGTTTATCCAGAATAAATCCTTGACCAACATGTAACCGTCACATCATTTGTGTGAATTAATTCATTCCTCTCTGCTAACTTGTTTTATGATCAGTTTTTTTCAAAGATAATTCATCT                              ]
[-] EMBL CB648389             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGAGCCTTGGTTGCATGTTTGCCGCAATGATATTCCGAGTCGACCCTTTCTTTAATGGTCAGGATAACTACGACCAATTAGTCAAAATTACCGAGGTTCTTGGAACAGAAGATTTCTACAATTACCTTGAAAAGTATGGTCTTGAGCTTGACCCGCAGCTTGAAAGACTTGTTGGAAGACATAATAGGAAGCCATGGTCAATGTTTGTTAACTCGGGGAACAGACACCTAGCAAGCCCTGAGGCTATTGATTTTGTAGACAGGTTGCTTCGCTACGATCACCAGGAAAGGCCTACAGCAAAGGAAGCCATGGCTCATCCATATTTCAATCCAGTGAGAAGCACTTAAAACGGCAGGAAGAGTGCCCAATAGTGGTATGCGGCATATTTGACAATTTTTGCTACGGTGTCAAATATATAGAGGGAATTTAATTTTCAAGGCTGTATGGTTTATCCAGAATAAATCCTTGACCAACATGTAACCGTCACATCATTTGTGTGAATTAATTCATTCCTCTCTGCTAACTTGTTTTATGATCAGTTTTTATCAATAATAATTCATCTCTGCACTTTCATCCCCAAAAAAAAAAGGAG]
[+] EMBL CB673752             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GGTTGCATGTTTGCCGCAATGATATTCCGAGTCGACCCTTTCTTTAATGGTCAGGATAACTACGACCAATTAGTCAAAATTACCGAGGTTCTTGGAACAGAAGATTTCTACAATTACCTTGAAAAGTATGGTCTTGAGCTTGACCCGCAGCTTGAAAGACTTGTTGGAAGACATAATAGGAAGCCATGGTCAATGTTTGTTAACTCGGGGAACAGACACCTAGCAAGCCCTGAGGCTATTGATTTTGTAGACAGGTTGCTTCGCTACGATCACCAGGAAAGGCCTACAGCAAAGGAAGCCATGGCTCATCCATATTTCAATCCAGTGAGAAGCACTTAAAACGGCAGGAAGAGTGCCCAATAGTGGTATGCGGCATATTTGACAATTTTTGCTACGGTGTCAAATATATAGAGGGAATTTAATTTTCAAGGCTGTATGGTTTATCCAGAATAAATCCTTGACCAACATGTAACCGTCACATCATTTGTGTGAATTAATTCATTCCTCTCTGCTAACTTGTTTTATGATCAGTTTTTATCAATAATAATTCATCTCTG                           ]
[+] EMBL AA749690             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TATGCGGCATATTTGACAATTTTTGCTACGGTGTCAAATATATAGAGGGAATTTAATTTTCAAGGCTGTATGGTTTATCCAGAATAAATCCTTGACCAACATGTAACCGTCACATCATTTGTGTGAATTGGTTCATTCCTCTCTGCTAACTTGTTTTATGATCAGTTTTTATCAATAATAATTCATCTCTG                           ]




>consensus_10176#0
CGTAGGTCGCGGAGACCAACCCACCCATCCCTCGCGCCGGAAGAGAGGTACATGGCCTGG
TGCGCCGCGCGCAGCCGCCTCCTCCCCCTCGCCACCGCGCCGCAGCTGCTCCGCCGCCTC
CTCCTCTCCTCCGCTGCGGCCCCGCGCTACGCGCACCCCCACCACCACCACAGCAACAGC
CGCCGCCGCCGCCGCCCCCTCGCCCCCACCGTCTACGCCGCTGCCGCGGCAGCCGCAGCC
GAGGCGCCGCTCCCCATGCCGCCGCGCATCGGCCGCGCCACGCGGCACCCCGGGGGCGCC
GCCTCCGTGGCGCGCGTCTACGCCGACGCCAACTCCCAGCGGCCCAAGGAGTACTGGGAC
TACGAGTCGCTCGACATCGAATGGGGGGAGCAGGATGGGTACGAGGTGCTGCGCAAGCTT
GGGAGGGGGAAGTACAGCGAGGTGTTCGAGGGATTCCGGCCCGGGGGTGACGAGAGGAGC
GTTATTAAGATCCTCAAGCCCGTCAAGAAGAAAAAGATAAAGAGGGAAATAGAGATACTT
CAAAACTTATATGGCGGACCGAATATTGTAAAGCTACTTGATGTTGTCAGGGATGATGAA
TCGAAGACACCTAGTTTGATCTTTGAATATGTCAACAATACTGATTTCAAAGTACTCTAC
CCAACACTATTGGATTACGATATCAGATACTACATTTACGAATTATTAAAGGCACTAGAT
TATTGTCATTCACGAGGCATCATGCATCGAGATGTCAAACCTCACAATATCATGATTGAT
CATGAGAAACGCCAGCTTTGTCTTATTGATTGGGGTCTAGCAGAGTTCTATCATCCCAAG
ATGGAATATAATGCTAGAGTTGCTTCAAGATCTTATAAGGGCCCTGAACTTCTTGTGGAT
TTGCTAGATTATGATTACTCGTTGGATTTGTGGAGCCTTGGTTGCATGTTTGCCGCAATG
ATATTCCGAGTCGACCCTTTCTTTAATGGTCAGGATAACTACGACCAATTAGTCAAAATT
ACCGAGGTTCTTGGAACAGAAGATTTCTACAATTACCTTGAAAAGTATGGTCTTGAGCTT
GACCCGCAGCTTGAAAGACTTGTTGGAAGACATAATAGGAAGCCATGGTCAATGTTTGTT
AACTCGGGGAACAGACACCTAGCAAGCCCTGAGGCTATTGATTTTGTAGACAGGTTGCTT
CGCTACGATCACCAGGAAAGGCCTACAGCAAAGGAAGCCATGGCTCATCCATATTTCAAT
CCAGTGAGAAGCACTTAAAACGGCAGGAAGAGTGCCCAATAGTGGTATGCGGCATATTTG
ACAATTTTTGCTACGGTGTCAAATATATAGAGGGAATTTAATTTTCAAGGCTGTATGGTT
TATCCAGAATAAATCCTTGACCAACATGTAACCGTCACATCATTTGTGTGAATTAATTCA
TTCCTCTCTGCTAACTTGTTTTATGATCAGTTTTTATCAATAATAATTCATCTCTGCACT
TTCATCCCCAAAAAAAAAAGGAG
clustalw multiple alignements is not computed in this case