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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10177#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2712 fasta sequence
[AGGCTTTAGCCCACCCGCACCGCCGCCGCAACCGCCTCCGGCGATCCCCATCCATCCCGCGCCGCGAGCGGAGCAGGGCGCCGCCGTTCGTTCGCCCTGCTGCTTCTCCCGCCGCATCCATCCCGGTTATATATCTATTTATTCAAGTGTGAGGTAGTTGGATAGAAAGCAAAAGTCCCTGGTGCAAACAACTTTAGGTGTCCTGTGTCCCGGTATTTGATTTTGTTTCATGCAACGGACATTGGGGGCAGGATAAGTCGAGTCATGGGAAAATCCGAGCATGGCAATCTACTGGTATCTCTCAGTGATGGGCTGCCCCATTATAGTCTTGCAGCAGCAGTTGGCCTGGCAATAGGAGTTGCTGGGTTGTGCAAGGCGCTGCATAGCAGCTTGGTGATACCACCAGTTTCTCAGAAGAAGTTACTTTCGAACTCAGATAGACTTTATTACACTGGAGGCCTGAAAAATCTTGGCAACAATTGCTTTCTTAATGTTATCCTGCAGGCACTTGCTAGCTGTGACGGGTTTGTTTCCTCTCTAGATAATTTGCTTGGAAGTGAGGATGTGCTACCTGAGGAAAAGTCCGAAAAAATGCCTCTTATTTTTGCTCTAAGTTCTCTTATAAAAGGTACACCGTTTACTCTTTCTAAAATGCACCTTTGGAAGGGAGTTGGTGTGGAATCAGTACTTAGCAACTTTTAAGTTCTTTTTTATTGATTTGTCTGTAATTATCTGTGCAATACATAATTTGAGTGGAAAATAAAGTGTTGGTTCCTGTGACCCTAGTGGTCTCAGGAATTACCGAGCAGTGGTGGTCTGGTGGAATCGTTACATACTGTAATACTGTAAACACGGTTCGTTTTTACAGGTATACTCTGATGCAGTGTTGACATTTATGAATCTATTTACATAAATTGCTGAACATCATATCATGTCATTGCATTGGTTGGTAAAATGAATTGCTTGCAGCTCACAGTTTGATGTTCTTGCTCCACTTCACACATCACGGTTTCTTCCTTCAATATGAAAGAAAAAGCATGTCTTTTTAACTGTTGTTTTATTTTTCTTAGAAAGAATATAACTTGTGATGCTCCCAGTTTCAAGTTCTATACTTGTAAAACTTCATTTAGTTGGTTACTCATAAAATTTCTTTTACTAGTTTATGAACTTTACTTAAATGTTGTAGACTTGAGCGTAGTTCGAGACAAAAGGACTGAACTGAGTCCACACAGAGTAATGGATGCTTTGAGCTTCTACGTCGGCCACTTTAATTTGACAAGAGAGCAGGATGCTTCGGAAGCCTTTCATCATCTTTTGACCTCACTGAGGGATGAATTTTCCCGTTGTTATGTACCAAATAGGAGTTCTCTGGCAGACATCACCATGTTTCCTTCCAAAGTATATAGTCAAAGGGAAGGTAACCAGCCTGAATGCAAGCGATGGAAACAAAACCTATTTGGTCCCTTTGATGGGACTATTGGCAGCATATTATCTTGCAGAAATTGTTCATCTGTGCTGTCATTGGACTTCGAAAATTTCTACTGCTTGCCTCTCTCACCTGTGGCTACTATAAATGGAGATATTATCAATGGATGTAGTTTGGTGGATTGCCTTGAGCACTTTACGGCGTTGGAGCATCTTGACAACTATCGTTGTGATCATTGTTGGCACAATGTTGCTGCCAAATA-TTTGTCTCTTAAATCCGAAGTTGATGAGGAAAAAATTAACAAACTAC-ACACCTGTGTCGACTATGGCAC-TTGCAG-TTG-CAGGCATATATTTACCCCGGAGGAAATGACATGTTCGATATCTTCTCAGGCAACAAAGCAGCTGGCTATCACTCATTTCCCAAAGATCTTGTGCATTCATTTGCTACGCGCTTCTGTTGGTCTAGATGGTGAATTTGTTAAGCGTGGGGGACACATTTCTTTCCCTTTACTTCTTGATCTTTCACCATTTGCTGGTGGTGCATTAATCCCTGGACAGGGACCTAAACCTTCAGCAATGAACAAGCAAAGACATGGCCAGCAAACTCTCCATCTGTGGCGACAGCTGAATGCAGAGATGCCTGTGAATATGTTCCCCGCTGCCACTGATGGGGACTCATCAAGTCATCATTGTGGTGATGAATCAATAAACACACTTGGACGCTCATTTTACGGATGCAGATAGTAGGTTCTTGTCTTCATCATCATTGACAGACAAGTTATATGGCCTCTCATCTGTCGTGGAACACTACGGCGTATGTGGAGGTGGGCATTATGCAGCTTACCGGAGAGTAACGCCAAATTCGGATTCTAATGAACCAGTGCAATCTCTTGCAAGTTTTAGAAAGGAGTGGCTTTACGTCTCGGATGATCATGTGTCCCATGTTTCAGAGTGTGAAGTTTTGGCAGCGGAGGCCACCCTGCTTTTCTACGAAAGGCTGTAGCAACCTGTTGAGTAGTAAATTAACTTCTTTTCTGGACAATGGAAGTATAACTTCCAGCCTCTGCAACAACTAAGAACACATACAACCATGTCTATGAACACTAGGATTTGAACCTTGGTGGGTGGATCCACGACTCCACCACCACATCAACGGGAAGCACGCTTCCCTAGTAAATTTACTTAGGGACAACACATTTTTTAGGGAGATCTCCAAAAAAGTTTATGAATAATTGATACTCTTTTGTTTGAGAACTTAATCTTGAATAAAGAATCATCAACTCATTC]
[+] EMBL CF306443 [AGGCTTTAGCCCACCCGCACCGCCGCCGCAACCGCCTCCGGCGATCCCCATCCATCCCGCGCCGCGAGCGGAGCAGGGCGCCGCCGTTCGTTCGCCCTGCTGCTTCTCCCGCCGCATCCATCCCGGTTATATATCTATTTATTCAAGTGTGAGGTAGTTGGATAGAAAGCAAAAGTCCCTGGTGCAAACAACTTTAGGTGTCCTGTGTCCCGGTATTTGATTTTGTTTCATGCAACGGACATTGGGGGCAGGATAAGTCGAGTCATGGGAAAATCCGAGCATGGCAATCTACTGGTATCTCTCAGTGATGGGCTGCCCCATTATAGTCTTGCAGCAGCAGTTGGCCTGGCAATAGGAGTTGCTGGGTTGTGCAAGGCGCTGCATAGCAGCTTGGTGATACCACCAGTTTCTCAGAAGAAGTTACTTTCGAACTCAGATAGACTT ]
[+] EMBL AK070730 [ CGCAACCGCCTCCGGCGATCCCCATCCATCCCGCGCCGCGAGCGGAGCAGGGCGCCGCCGTTCGTTCGCCCTGCTGCTTCTCCCGCCGCATCCATCCCGGTTATATATCTATTTATTCAAGTGTGAGGTAGTTGGATAGAAAGCAAAAGTCCCTGGTGCAAACAACTTTAGGTGTCCTGTGTCCCGGTATTTGATTTTGTTTCATGCAACGGACATTGGGGGCAGGATAAGTCGAGTCATGGGAAAATCCGAGCATGGCAATCTACTGGTATCTCTCAGTGATGGGCTGCCCCATTATAGTCTTGCAGCAGCAGTTGGCCTGGCAATAGGAGTTGCTGGGTTGTGCAAGGCGCTGCATAGCAGCTTGGTGATACCACCAGTTTCTCAGAAGAAGTTACTTTCGAACTCAGATAGACTTTATTACACTGGAGGCCTGAAAAATCTTGGCAACAATTGCTTTCTTAATGTTATCCTGCAGGCACTTGCTAGCTGTGACGGGTTTGTTTCCTCTCTAGATAATTTGCTTGGAAGTGAGGATGTGCTACCTGAGGAAAAGTCCGAAAAAATGCCTCTTATTTTTGCTCTAAGTTCTCTTATAAAAGGTACACCGTTTACTCTTTCTAAAATGCACCTTTGGAAGGGAGTTGGTGTGGAATCAGTACTTAGCAACTTTTAAGTTCTTTTTTATTGATTTGTCTGTAATTATCTGTGCAATACATAATTTGAGTGGAAAATAAAGTGTTGGTTCCTGTGACCCTAGTGGTCTCAGGAATTACCGAGCAGTGGTGGTCTGGTGGAATCGTTACATACTGTAATACTGTAAACACGGTTCGTTTTTACAGGTATACTCTGATGCAGTGTTGACATTTATGAATCTATTTACATAAATTGCTGAACATCATATCATGTCATTGCATTGGTTGGTAAAATGAATTGCTTGCAGCTCACAGTTTGATGTTCTTGCTCCACTTCACACATCACGGTTTCTTCCTTCAATATGAAAGAAAAAGCATGTCTTTTTAACTGTTGTTTTATTTTTCTTAGAAAGAATATAACTTGTGATGCTCCCAGTTTCAAGTTCTATACTTGTAAAACTTCATTTAGTTGGTTACTCATAAAATTTCTTTTACTAGTTTATGAACTTTACTTAAATGTTGTAGACTTGAGCGTAGTTCGAGACAAAAGGACTGAACTGAGTCCACACAGAGTAATGGATGCTTTGAGCTTCTACGTCGGCCACTTTAATTTGACAAGAGAGCAGGATGCTTCGGAAGCCTTTCATCATCTTTTGACCTCACTGAGGGATGAATTTTCCCGTTGTTATGTACCAAATAGGAGTTCTCTGGCAGACATCACCATGTTTCCTTCCAAAGTATATAGTCAAAGGGAAGGTAACCAGCCTGAATGCAAGCGATGGAAACAAAACCTATTTGGTCCCTTTGATGGGACTATTGGCAGCATATTATCTTGCAGAAATTGTTCATCTGTGCTGTCATTGGACTTCGAAAATTTCTACTGCTTGCCTCTCTCACCTGTGGCTACTATAAATGGAGATATTATCAATGGATGTAGTTTGGTGGATTGCCTTGAGCACTTTACGGCGTTGGAGCATCTTGACAACTATCGTTGTGATCATTGTTGGCACAATGTTGCTGCCAAATA TTTGTCTCTTAAATCCGAAGTTGATGAGGAAAAAATTAACAAACTAC ACACCTGTGTCGACTATGGCAC TTGCAG TTG CAGGCATATATTTACCCCGGAGGAAATGACATGTTCGATATCTTCTCAGGCAACAAAGCAGCTGGCTATCACTCATTTCCCAAAGATCTTGTGCATTCATTTGCTACGCGCTTCTGTTGGTCTAGATGGTGAATTTGTTAAGCGTGGGGGACACATTTCTTTCCCTTTACTTCTTGATCTTTCACCATTTGCTGGTGGTGCATTAATCCCTGGACAGGGACCTAAACCTTCAGCAATGAACAAGCAAAGACATGGCCAGCAAACTCTCCATCTGTGGCGACAGCTGAATGCAGAGATGCCTGTGAATATGTTCCCCGCTGCCACTGATGGGGACTCATCAAGTCATCATTGTGGTGATGAATCAATAAACACACTTGGACGCTCATTTTACGGATGCAGATAGTAGGTTCTTGTCTTCATCATCATTGACAGACAAGTTATATGGCCTCTCATCTGTCGTGGAACACTACGGCGTATGTGGAGGTGGGCATTATGCAGCTTACCGGAGAGTAACGCCAAATTCGGATTCTAATGAACCAGTGCAATCTCTTGCAAGTTTTAGAAAGGAGTGGCTTTACGTCTCGGATGATCATGTGTCCCATGTTTCAGAGTGTGAAGTTTTGGCAGCGGAGGCCACCCTGCTTTTCTACGAAAGGCTGTAGCAACCTGTTGAGTAGTAAATTAACTTCTTTTCTGGACAATGGAAGTATAACTTCCAGCCTCTGCAACAACTAAGAACACATACAACCATGTCTATGAACACTAGGATTTGAACCTTGGTGGGTGGATCCACGACTCCACCACCACATCAACGGGAAGCACGCTTCCCTAGTAAATTTACTTAGGGACAACACATTTTTTAGGGAGATCTCCAAAAAAGTTTATGAATAATTGATACTCTTTTGTTTGAGAACTTAATCTTGAATAAAGAATCATCAACTCATTC]
[+] EMBL CB097026 [ CGAGACAAGGGGACTGAACTGAGTCC CACAGAGTAATGGATGCTTTGAGCTTCTACGTCGGCCACTTTAATTTGACAAGAGAGCAGGATGCTTCGGAAGCCTTTCATCATCTTTTGACCTCACTGAGGGATGAATTTTCCCGTTGTTATGTACCAAATAGGAGTTCTCTGGCAGACATCACCATGTTTCCTTCCAAAGTATATAGTCAAAGGGAAGGTAACCAGCCTGAATGCAAGCGATGGAAACAAAACCTATTTGGTCCCTTTGATGGGACTATTGGCAGCATATTATCTTGCAGAAATTGTTCATCTGTGCTGTCATTGGACTTCGAAAATTTCTACTGCTTGCCTCTCTCACCTGTGGCTACTATAAATGGAGATATTATCAATGGATGTAGTTTGGTGGATTGCCTTGAGCACTTTACGGCGTTGGAGCATCTTGACAACTATCGTTGTGATCATTGTTGGCACAATGNTGCTGCCAAATATTTTGTCTCTTAAATCCGAAGTTGATGANGAAAAAATTAACAAACTACGCCACCTGTGTCGACTATGGCACTTTGCAGNTTGCCAGGCATA ]
consensusID : consensus_10177#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 616 fasta sequence
[GGCATCATTGTGGTGATGAATCAATAAACACACTTGGACGCTCATTTGACGTGGGAAATAGGGATGCAGATAGTAGGTTCTTGTCTTCATCATCATTGACAGACAAGTTATATGGCCTCTCATCTGTCGTGGAACACTACGGCGTATGTGGAGGTGGGCATTATGCAGCTTACCGGAGAGTAACGCCAAATTCGGATTCTAATGAACCAGTGCAATCTCTTGCAAGTTTTAGAAAGGAGTGGCTTTACGTCTCGGATGATCATGTGTCCCATGTTTCAGAGTGTGAAGTTTTGGCAGCGGAGGCCACCCTGCTTTTCTACGAAAGGCTGTAGCAACCTGTTGAGTAGTAAATTAACTTCTTTTCTGGACAATGGAAGTATAACTTCCAGCCTCTGCAACAACTAAGAACACATACAACCATGTCTATGAACACTAGGATTTGAACCTTGGTGGGTGGATCCACGACTCCACCACCACATCAACGGGAAGCACGCTTCCCTAGTAAATTTACTTAGGGACAACACATTTTTTAGGGAGATCTCCAAAAAAGTTTATGAATAATTGATACTCTTTTGTTTGAGAACTTAATCTTGAATAAAGAATCATCAACTCATTC]
[-] EMBL CB966386 [GGCATCATTGTGGTGATGAATCAATAAACACACTTGGACGCTCATTTGACGTGGGAAATAGGGATGCAGATAGTAGGTTCTTGTCTTCATCATCATTGACAGACAAGTTATATGGCCTCTCATCTGTCGTGGAACACTACGGCGTATGTGGAGGTGGGCATTATGCAGCTTACCGGAGAGTAACGCCAAATTCGGATTCTAATGAACCAGTGCAATCTCTTGCAAGTTTTAGAAAGGAGTGGCTTTACGTCTCGGATGATCATGTGTCCCATGTTTCAGAGTGTGAAGTTTTGGCAGCGGAGGCCACCCTGCTTTTCTACGAAAGGCTGTAGCAACCTGTTGAGTAGTAAATTAACTTCTTTTCTGGACAATGGAAGTATAACTTCCAGCCTCTGCAACAACTAAGAACACATACAACCATGTCTATGAACACTAGGATTTGAACCTTGGTGGGTGGATCCACGACTCCACCACCACATCAACGGGAAGCACGCTTCCCTAGTAAATTTACTTAGGGACAACACATTTTTTAGGGAGATCTCCAAAAAAGTTTATGAATAATTGATACTCTTTTGTTTGAGAACTTAATCTTGAATAAAGAATCATCAACTCATTC]
[-] EMBL CB966566 [ GTGATGAATCAATAAACACACTTGGACGCTCATTTTACGTGGGAAATAGGGATGCAGATAGTAGGTTCTTGTCTTCATCATCATTGACAGACAAGTTATATGGCCTCTCATCTGTCGTGGAACACTACGGCGTATGTGGAGGTGGGCATTATGCAGCTTACCGGAGAGTAACGCCAAATTCGGATTCTAATGAACCAGTGCAATCTCTTGCAAGTTTTAGAAAGGAGTGGCTTTACGTCTCGGATGATCATGTGTCCCATGTTTCAGAGTGTGAAGTTTTGGCAGCGGAGGCCACCCTGCTTTTCTACGAAAGGCTGTAGCAACCTGTTGAGTAGTAAATTAACTTCTTTTCTGGACAATGGAAGTATAACTTCCAGCCTCTGCAACAACTAAGAACACATACAACCATGTCTATGAACACTAGGATTTGAACCTTGGTGGGTGGATCCACGACTCCACCACCACATCAACGGGAAGCACGCTTCCCTAGTAAATTTACTTAGGGACAACACATTTTTTAGGGAGATCTCC AAAAAGTTTATGAATAATTGATACTCTTTTGTTTGAGAACTTAATCTTGAATAAAGAATCATCAACT ]
consensusID : consensus_10177#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 611 fasta sequence
[GCTGATGACTCCATTGACACACTTGGACGCTCATTTTACCTGGGAAATAGGGATCCAGACTAGTAGGTTCTTGTCTTCATCATCATTGACAGACAAGTTATATGGCCTCTCATCTGTCGTGGAACACTACGGCGTACTCGTGCGAGGTGGGCATTATGCAGCTTACCGGAGAGTAACCCCCAATTCGGATTCTAATGAACCCGTGCAATCTCTAGCAAGTTTTAGAAAGGACTGGCTTTACGTCTCCGGATGATCATCGTGTCCCACGTTTCCAGAGTGTGAAGTCTTGGCAGCGGAGGCCACCCTAGCTTTTGTGACGAAAGCCACTAGCAACCTGTTGAGTTAGTAAATTAACTTCTTTGTCTGGCACAATGGAAGTATAACTTCCAGCCTCTGCAACAACTAAGAACACATACAACCATGTCTAATGAACCCTAGGATTTGAACCTTGGTGGCATGGATCCACGACTCCACCACCACATCTACGGGAAGCACGCTTCCCTAGTAAATTTACTTAGGGACAACACATTCTTTAGGGAGATCTCCACGAAGTTTATGTATAATTGATACTCTTTTGTCTGAGAACTTAATCTTGCTTACAGATCATCACT]
[-] EMBL CB964518 [GCTGATGACTCCATTGACACACTTGGACGCTCATTTTACCTGGGAAATAGGGATCCAGACTAGTAGGTTCTTGTCTTCATCATCATTGACAGACAAGTTATATGGCCTCTCATCTGTCGTGGAACACTACGGCGTACTCGTGCGAGGTGGGCATTATGCAGCTTACCGGAGAGTAACCCCCAATTCGGATTCTAATGAACCCGTGCAATCTCTAGCAAGTTTTAGAAAGGACTGGCTTTACGTCTCCGGATGATCATCGTGTCCCACGTTTCCAGAGTGTGAAGTCTTGGCAGCGGAGGCCACCCTAGCTTTTGTGACGAAAGCCACTAGCAACCTGTTGAGTTAGTAAATTAACTTCTTTGTCTGGCACAATGGAAGTATAACTTCCAGCCTCTGCAACAACTAAGAACACATACAACCATGTCTAATGAACCCTAGGATTTGAACCTTGGTGGCATGGATCCACGACTCCACCACCACATCTACGGGAAGCACGCTTCCCTAGTAAATTTACTTAGGGACAACACATTCTTTAGGGAGATCTCCACGAAGTTTATGTATAATTGATACTCTTTTGTCTGAGAACTTAATCTTGCTTACAGATCATCACT]
consensusID : consensus_10177#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 496 fasta sequence
[GGAGTGCTTTACGTCTCGGATGATCATGTGTCCCATGTTTCAGAGTGTGAAGTTTTGCAGCGGAGGCCACCCTGCTTTTCTACGAAAGGCTGTAGCAACCTGTTGAGTACATGAAAGGCCCAAAATACACAATTCCACAGGCACAAGGGCCTTTGCAGAAGGGGAAGCAGCATGAAGGGCTAAATTCTGTTCTACTGCTGCCAAGGATGTTATTTTAGCTGAATGGACACCTTGGCATAGCNAATAGAGGAGTTATGTGTGTCAGCGTGTGTGCTTTCGGTTTTTTTTTTCAATTTCTTCTCTTTTTTTTTTCCTCTCTTTCTCTTTTCTTCTTCTTTATTTCTTATTTCTTTTTCTTTTTTGGCTTGGCTCCTCTGATCTTCTCTTTTGCTAGACAAGACAGATACACTTGCAGCTAAAGCTGGCTCTACCAGAATTTACCTTTTTAGCTGGAATTTATACAAGGCAAGTCAGTATATNCCATCGAAAAAAAAAA]
[+] EMBL BM420301 [GGAGTGCTTTACGTCTCGGATGATCATGTGTCCCATGTTTCAGAGTGTGAAGTTTTGCAGCGGAGGCCACCCTGCTTTTCTACGAAAGGCTGTAGCAACCTGTTGAGTACATGAAAGGCCCAAAATACACAATTCCACAGGCACAAGGGCCTTTGCAGAAGGGGAAGCAGCATGAAGGGCTAAATTCTGTTCTACTGCTGCCAAGGATGTTATTTTAGCTGAATGGACACCTTGGCATAGCNAATAGAGGAGTTATGTGTGTCAGCGTGTGTGCTTTCGGTTTTTTTTTTCAATTTCTTCTCTTTTTTTTTTCCTCTCTTTCTCTTTTCTTCTTCTTTATTTCTTATTTCTTTTTCTTTTTTGGCTTGGCTCCTCTGATCTTCTCTTTTGCTAGACAAGACAGATACACTTGCAGCTAAAGCTGGCTCTACCAGAATTTACCTTTTTAGCTGGAATTTATACAAGGCAAGTCAGTATATNCCATCGAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10177#0 AGGCTTTAGCCCACCCGCACCGCCGCCGCAACCGCCTCCGGCGATCCCCATCCATCCCGC 60
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 GCCGCGAGCGGAGCAGGGCGCCGCCGTTCGTTCGCCCTGCTGCTTCTCCCGCCGCATCCA 120
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 TCCCGGTTATATATCTATTTATTCAAGTGTGAGGTAGTTGGATAGAAAGCAAAAGTCCCT 180
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 GGTGCAAACAACTTTAGGTGTCCTGTGTCCCGGTATTTGATTTTGTTTCATGCAACGGAC 240
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 ATTGGGGGCAGGATAAGTCGAGTCATGGGAAAATCCGAGCATGGCAATCTACTGGTATCT 300
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 CTCAGTGATGGGCTGCCCCATTATAGTCTTGCAGCAGCAGTTGGCCTGGCAATAGGAGTT 360
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 GCTGGGTTGTGCAAGGCGCTGCATAGCAGCTTGGTGATACCACCAGTTTCTCAGAAGAAG 420
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 TTACTTTCGAACTCAGATAGACTTTATTACACTGGAGGCCTGAAAAATCTTGGCAACAAT 480
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 TGCTTTCTTAATGTTATCCTGCAGGCACTTGCTAGCTGTGACGGGTTTGTTTCCTCTCTA 540
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 GATAATTTGCTTGGAAGTGAGGATGTGCTACCTGAGGAAAAGTCCGAAAAAATGCCTCTT 600
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 ATTTTTGCTCTAAGTTCTCTTATAAAAGGTACACCGTTTACTCTTTCTAAAATGCACCTT 660
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 TGGAAGGGAGTTGGTGTGGAATCAGTACTTAGCAACTTTTAAGTTCTTTTTTATTGATTT 720
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 GTCTGTAATTATCTGTGCAATACATAATTTGAGTGGAAAATAAAGTGTTGGTTCCTGTGA 780
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 CCCTAGTGGTCTCAGGAATTACCGAGCAGTGGTGGTCTGGTGGAATCGTTACATACTGTA 840
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 ATACTGTAAACACGGTTCGTTTTTACAGGTATACTCTGATGCAGTGTTGACATTTATGAA 900
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 TCTATTTACATAAATTGCTGAACATCATATCATGTCATTGCATTGGTTGGTAAAATGAAT 960
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 TGCTTGCAGCTCACAGTTTGATGTTCTTGCTCCACTTCACACATCACGGTTTCTTCCTTC 1020
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 AATATGAAAGAAAAAGCATGTCTTTTTAACTGTTGTTTTATTTTTCTTAGAAAGAATATA 1080
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 ACTTGTGATGCTCCCAGTTTCAAGTTCTATACTTGTAAAACTTCATTTAGTTGGTTACTC 1140
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 ATAAAATTTCTTTTACTAGTTTATGAACTTTACTTAAATGTTGTAGACTTGAGCGTAGTT 1200
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 CGAGACAAAAGGACTGAACTGAGTCCACACAGAGTAATGGATGCTTTGAGCTTCTACGTC 1260
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 GGCCACTTTAATTTGACAAGAGAGCAGGATGCTTCGGAAGCCTTTCATCATCTTTTGACC 1320
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 TCACTGAGGGATGAATTTTCCCGTTGTTATGTACCAAATAGGAGTTCTCTGGCAGACATC 1380
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 ACCATGTTTCCTTCCAAAGTATATAGTCAAAGGGAAGGTAACCAGCCTGAATGCAAGCGA 1440
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 TGGAAACAAAACCTATTTGGTCCCTTTGATGGGACTATTGGCAGCATATTATCTTGCAGA 1500
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 AATTGTTCATCTGTGCTGTCATTGGACTTCGAAAATTTCTACTGCTTGCCTCTCTCACCT 1560
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 GTGGCTACTATAAATGGAGATATTATCAATGGATGTAGTTTGGTGGATTGCCTTGAGCAC 1620
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 TTTACGGCGTTGGAGCATCTTGACAACTATCGTTGTGATCATTGTTGGCACAATGTTGCT 1680
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 GCCAAATATTTGTCTCTTAAATCCGAAGTTGATGAGGAAAAAATTAACAAACTACACACC 1740
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 TGTGTCGACTATGGCACTTGCAGTTGCAGGCATATATTTACCCCGGAGGAAATGACATGT 1800
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 TCGATATCTTCTCAGGCAACAAAGCAGCTGGCTATCACTCATTTCCCAAAGATCTTGTGC 1860
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 ATTCATTTGCTACGCGCTTCTGTTGGTCTAGATGGTGAATTTGTTAAGCGTGGGGGACAC 1920
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 ATTTCTTTCCCTTTACTTCTTGATCTTTCACCATTTGCTGGTGGTGCATTAATCCCTGGA 1980
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 CAGGGACCTAAACCTTCAGCAATGAACAAGCAAAGACATGGCCAGCAAACTCTCCATCTG 2040
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 TGGCGACAGCTGAATGCAGAGATGCCTGTGAATATGTTCCCCGCTGCCACTGATGGGGAC 2100
consensus_10177#1 ------------------------------------------------------------
consensus_10177#2 ------------------------------------------------------------
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 TCATCAAGTCATCATTGTGGTGATGAATCAATAAACACACTTGGACGCTCATTTTACG-- 2158
consensus_10177#1 -------GGCATCATTGTGGTGATGAATCAATAAACACACTTGGACGCTCATTTGACGTG 53
consensus_10177#2 ------------------GCTGATGACTCCATTGACACACTTGGACGCTCATTTTACCTG 42
consensus_10177#3 ------------------------------------------------------------
consensus_10177#0 ---------GATGCAGA-TAGTAGGTTCTTGTCTTC-ATCATCATTGACAGACAAGTTAT 2207
consensus_10177#1 GGAAATAGGGATGCAGA-TAGTAGGTTCTTGTCTTC-ATCATCATTGACAGACAAGTTAT 111
consensus_10177#2 GGAAATAGGGATCCAGACTAGTAGGTTCTTGTCTTC-ATCATCATTGACAGACAAGTTAT 101
consensus_10177#3 -----------------GGAGT-GCTTTACGTCTCGGATGATCAT-GTGTCCCATGTTTC 41
*** * ** **** ** ***** * ** ***
consensus_10177#0 ATGGCCTCTCATCTGTCGTGGAACACTACGGCGTATGTG---GAGGTGGGCATTATGCAG 2264
consensus_10177#1 ATGGCCTCTCATCTGTCGTGGAACACTACGGCGTATGTG---GAGGTGGGCATTATGCAG 168
consensus_10177#2 ATGGCCTCTCATCTGTCGTGGAACACTACGGCGTACTCGTGCGAGGTGGGCATTATGCAG 161
consensus_10177#3 AGAGTGTGAAGTTTTGCAGCGGAGGCCACCCTGCTTTTCT--ACGAAAGGC----TGTAG 95
* * * * * * * * * ** * * *** ** **
consensus_10177#0 CTTACCGGAGAGTAACGCCAAATTCGGATTCTAATGAACCAGTGCAATCTCTTGCAAGTT 2324
consensus_10177#1 CTTACCGGAGAGTAACGCCAAATTCGGATTCTAATGAACCAGTGCAATCTCTTGCAAGTT 228
consensus_10177#2 CTTACCGGAGAGTAACCCCCAATTCGGATTCTAATGAACCCGTGCAATCTCTAGCAAGTT 221
consensus_10177#3 CAACCTGTTGAGTA-CATGAAA---GGCCCAAAATACACAATTCCACAGGCACAAGGGCC 151
* * * ***** * ** ** *** ** * ** * *
consensus_10177#0 TTAGAAAGGAGTGGCTTTACGTCTC-GGATGATCAT-GTGTCCCATGTTTC-AGAGTGTG 2381
consensus_10177#1 TTAGAAAGGAGTGGCTTTACGTCTC-GGATGATCAT-GTGTCCCATGTTTC-AGAGTGTG 285
consensus_10177#2 TTAGAAAGGACTGGCTTTACGTCTCCGGATGATCATCGTGTCCCACGTTTCCAGAGTGTG 281
consensus_10177#3 TTTGCAGAAGGGGAAGCAGCATGAAGGGCTAA--ATTCTGTTCTACTGCTGCCAAGGATG 209
** * * * * * ** * * ** *** * * * ** **
consensus_10177#0 AAGTTTTGGCAGCGGAGGCCACCCT-GCTTTTCT-ACGAAAGGCTGTAGCAACCTGTTGA 2439
consensus_10177#1 AAGTTTTGGCAGCGGAGGCCACCCT-GCTTTTCT-ACGAAAGGCTGTAGCAACCTGTTGA 343
consensus_10177#2 AAGTCTTGGCAGCGGAGGCCACCCTAGCTTTTGTGACGAAAGCCACTAGCAACCTGTTGA 341
consensus_10177#3 TTATTTTAGCTG-AATGGACACCTTGGCATAGCNAATAGAGGAGTTATGTGTGTCAGCGT 268
* ** ** * ** **** * ** * * * * * *
consensus_10177#0 GT-AGTAAATTAACTTCTTT-TCTGG-ACAATGGAAGTATAACTTCCAGCCTCTGCAACA 2496
consensus_10177#1 GT-AGTAAATTAACTTCTTT-TCTGG-ACAATGGAAGTATAACTTCCAGCCTCTGCAACA 400
consensus_10177#2 GTTAGTAAATTAACTTCTTTGTCTGGCACAATGGAAGTATAACTTCCAGCCTCTGCAACA 401
consensus_10177#3 GT--GTGCTTTCGGTTTTTT---------------TTTTCAATTTCTTCTCTTTTTTTTT 311
** ** ** ** *** * ** *** ** *
consensus_10177#0 ACTAAGAACACATACAACCATGTCTA-TGAACACTAGGATTTGAACCTTGGTGG-GTGGA 2554
consensus_10177#1 ACTAAGAACACATACAACCATGTCTA-TGAACACTAGGATTTGAACCTTGGTGG-GTGGA 458
consensus_10177#2 ACTAAGAACACATACAACCATGTCTAATGAACCCTAGGATTTGAACCTTGGTGGCATGGA 461
consensus_10177#3 TCCTCTCTTTCTCTTTTCTTCTTCTT-TATTTCTTATTTCTTTTTCTTTTTTGGCTTGGC 370
* * * *** * ** ** * ** *** ***
consensus_10177#0 TCCACGACTCCACCACCACATCA---ACGGGAAGCACGCTTCCCTAGTAAATTTACTTAG 2611
consensus_10177#1 TCCACGACTCCACCACCACATCA---ACGGGAAGCACGCTTCCCTAGTAAATTTACTTAG 515
consensus_10177#2 TCCACGACTCCACCACCACATCT---ACGGGAAGCACGCTTCCCTAGTAAATTTACTTAG 518
consensus_10177#3 TCCTCTGATCTTCTCTTTTGCTAGACAAGACAGATACACTTGCAGCTAAAGCTGGCTCTA 430
*** * ** * * * * ** *** * ** * **
consensus_10177#0 GGACAACACATTTTTTAGGGAGATCTCCAAAAAAGTTTATGAATAATTGATACTCTTTTG 2671
consensus_10177#1 GGACAACACATTTTTTAGGGAGATCTCCAAAAAAGTTTATGAATAATTGATACTCTTTTG 575
consensus_10177#2 GGACAACACATTCTTTAGGGAGATCTCCACGAA-GTTTATGTATAATTGATACTCTTTTG 577
consensus_10177#3 CCAGAATTTACCTTTTTAGCTGGAATTTATACAAG---GCAAGTCAGT-ATATNCCATCG 486
* ** * *** * * * * * * * * * *** * * *
consensus_10177#0 TTTGAGAACTTAATCTTGAATAAAGAATCATCAACTCATTC 2712
consensus_10177#1 TTTGAGAACTTAATCTTGAATAAAGAATCATCAACTCATTC 616
consensus_10177#2 TCTGAGAACTTAATCTTGCTTACAGA-TCATCACT------ 611
consensus_10177#3 AAAAAAAAAA------------------------------- 496
* **
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||