These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10213#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2518 fasta sequence [TACAACAGAATCGAAATACAGAATACTGGGATAACGACACACTGGGAGTCACTTGCAACCTTTAGGGTTGAATCTCCGGAGATGGAAATGAATCAACAGCATAATGAGGGCAACGAATCTTTCGTGGCCTTGATGAACGGTTTTGCTGGTGACGGGACGGCAACACTACCGAATGATGGGGAGCAGAGAATGAGTATTCCAGCAAGAGAATTATTTGCAGCAATTGAGGCCGACTCAGGCTTGTTGCCTGTGAACAGTAGCAACACTAATGAAAAAAGGAAGAGGCGTCTACAGAGGCTCACTGGCAAACAGTCGGAGGTACTTGAGGGGTTTTTCAGCATCTGTGGGCATCCCGATGATGGACAAAAGAGGCATCTGAGTGAGACAACAGGTCTTGGTTTAGATCAAGTGAAGTTTTGGTTTCAGAATAAAAGAACACAAGTAAAGACTATGTGCTGGAAGGAAGAGAACTATAAGTTGTCGGTGGAGAATGAAATTCTGAGGGATGAGAACAGGAGAGTTAAGATAGCTCACTGCACTGCTGTATGCCTCACTTGCTGTAATTCATCAGTACAGAACCAGCTTGCCGTTGAGATGGAAAGGTTAATGGGGCAGAGTGAGTGGCTGCAACAAGAGATTGCACGGTCGAATGGAACACCCCCGGCTGCAAACCTTGCCTTTCAACTTAATTCATCAGCAGACTATGTATTTTCAGGGCAACATGACCAACAAATGATTGCTGAACTAGCCAAAAACGCAATGCACGCATTGATTATTTTGGCCGAATCCCATGTCGCTCTATGGTTTCCCGTCCCTGGCTGTTCTTATGAAGTATTGAACAAGATGGCTTATGACCAAGCATATCCTGGGGATAACAGTGCAAACGCCATTGGATTCAAGACAGAGGCTACTCGTGCAGTTTCTATGGTGATGATGGACTACAAAAGCGTTGTGGATTTCCTCATGGATCCTTACAACTACCGAACTTTCTTTCCTGAAGTTATTTCCGGGGCAGTAACCAACAGGATCTACACGTGGCCTACCAGTGATGGTTATAATGGGGTTATACAACTGATGACTGTCGAGATGATGTTCCCATCGCCCCTGGTACCGGCTAGGAAATGCACATTCCTGCGCTATTGTAATGTGCTGAACGAAGGATTAGTGGTCGTCATTGATGTGTCATTGGACGATGGCAGTATCTTCTCCAAATGCCGTAAAATGCCATCAGGGTTTCTGATCCAATCCATAAGGCCAAACAGCTGCAAGGTCACTGCCATAGAGCACGTCCTTGCGGATGACACCGGTGTTCATGAGCTCTACCAGCCTCGTGTGAATGGACTCGTCTTCGGAGCTCGGCGCTGGGTGGCGACCATGGCGCGGCAGTCTGCACGCATGAGAGATGTTCATCACAACAAGACAGCTCCGCAAGTCAGCACGAAGGGGAGGAAGAATCTAATGAAGCTAGCGGACGACCTGCTCGCGAGCTTCGCCGGCGGCATCGCCGCCACTGGCGGAGGAACGTGGACCGTCGTGATCGGCGCCGGCACGGAGAAGGACATCAGGGTCGCGTACAGGAGGACCACCGAGGGCAGCAGCAGCTACAACGCGATCCTGTCCGTCACCGCGTCCCTGCGTCTGCCGCTGCCCATGAGGAAAACCTTCGATCTGCTCAGGAACCTTACTCACCGCTGCAAGTGGGACGTCCTGGTGCACGGCAGCGTGGTGAAGGAGGAGGTCACCATCGCCAGAGGCGTCGGGAACGACGACACTGTCACCGTCCTCCACTGCAAGCGCGCCGGCAGGGAGGACAGGGGAAGGACCATGATCCTGCAGAACAACGGGTACGACGCGTCGGGCTCGTTCATGGTCTACTCCCAGATCGACAGCGAGCTGATGAACACCATGGTCCTGAGCCCCAGCGACCTGCCGCCCGGGCGGGGCGGGCCGTCCCTCTACCCCACCGGCTTCTCCCTTCTCCCTGACGTCGAGGCTGCCCAGGACAGCAGCGGCATCGCCCTCGGCGAGGTTGGGGGAACTCTCATGACCATGGGCTTCCAGATTCCGGTGAAGCTCGCCAGTGGGGATCGCATGTATTCCCGGTCTGCGGCATCGGCAATCAGGCTCATGACTGACACCATTGCCCTCGTCAAGAAGACGCTGATGAACGAGCATTCTGGTATCTACGGGGTTAGCCCGTTCCACCCCTAGATTCAGAAAAACACCAGAGGGAGAAAAGGGAGGTCCGTGTGCAGATAAAAATCAAGAACATGCGAAGGGGATTCATCGGCTCCGATCACCCTGCATCTCCCAGAATTTGCTGAATTAATTAGAACTTTAAGGTTGTGTTAACAACCTGTAATAATGTTTTTAAGGCCAAACTTATATCGTGTCTTTGCTGTAATAATGTAGTATGCGCCTGATGGATGTCGACTGCCGTGTACCGATGCAGTTTGCTTCGCAGAGACGCGGATACATTTGCTATCGTATGGATGCTCCTTTAGAAGCAAAAAAAAAA] [+] EMBL AF317882 [TACAACAGAATCGAAATACAGAATACTGGGATAACGACACACTGGGAGTCACTTGCAACCTTTAGGGTTGAATCTCCGGAGATGGAAATGAATCAACAGCATAATGAGGGCAACGAATCTTTCGTGGCCTTGATGAACGGTTTTGCTGGTGACGGGACGGCAACACTACCGAATGATGGGGAGCAGAGAATGAGTATTCCAGCAAGAGAATTATTTGCAGCAATTGAGGCCGACTCAGGCTTGTTGCCTGTGAACAGTAGCAACACTAATGAAAAAAGGAAGAGGCGTCTACAGAGGCTCACTGGCAAACAGTCGGAGGTACTTGAGGGGTTTTTCAGCATCTGTGGGCATCCCGATGATGGACAAAAGAGGCATCTGAGTGAGACAACAGGTCTTGGTTTAGATCAAGTGAAGTTTTGGTTTCAGAATAAAAGAACACAAGTAAAGACTATGTGCTGGAAGGAAGAGAACTATAAGTTGTCGGTGGAGAATGAAATTCTGAGGGATGAGAACAGGAGAGTTAAGATAGCTCACTGCACTGCTGTATGCCTCACTTGCTGTAATTCATCAGTACAGAACCAGCTTGCCGTTGAGATGGAAAGGTTAATGGGGCAGAGTGAGTGGCTGCAACAAGAGATTGCACGGTCGAATGGAACACCCCCGGCTGCAAACCTTGCCTTTCAACTTAATTCATCAGCAGACTATGTATTTTCAGGGCAACATGACCAACAAATGATTGCTGAACTAGCCAAAAACGCAATGCACGCATTGATTATTTTGGCCGAATCCCATGTCGCTCTATGGTTTCCCGTCCCTGGCTGTTCTTATGAAGTATTGAACAAGATGGCTTATGACCAAGCATATCCTGGGGATAACAGTGCAAACGCCATTGGATTCAAGACAGAGGCTACTCGTGCAGTTTCTATGGTGATGATGGACTACAAAAGCGTTGTGGATTTCCTCATGGATCCTTACAACTACCGAACTTTCTTTCCTGAAGTTATTTCCGGGGCAGTAACCAACAGGATCTACACGTGGCCTACCAGTGATGGTTATAATGGGGTTATACAACTGATGACTGTCGAGATGATGTTCCCATCGCCCCTGGTACCGGCTAGGAAATGCACATTCCTGCGCTATTGTAATGTGCTGAACGAAGGATTAGTGGTCGTCATTGATGTGTCATTGGACGATGGCAGTATCTTCTCCAAATGCCGTAAAATGCCATCAGGGTTTCTGATCCAATCCATAAGGCCAAACAGCTGCAAGGTCACTGCCATAGAGCACGTCCTTGCGGATGACACCGGTGTTCATGAGCTCTACCAGCCTCGTGTGAATGGACTCGTCTTCGGAGCTCGGCGCTGGGTGGCGACCATGGCGCGGCAGTCTGCACGCATGAGAGATGTTCATCACAACAAGACAGCTCCGCAAGTCAGCACGAAGGGGAGGAAGAATCTAATGAAGCTAGCGGACGACCTGCTCGCGAGCTTCGCCGGCGGCATCGCCGCCACTGGCGGAGGAACGTGGACCGTCGTGATCGGCGCCGGCACGGAGAAGGACATCAGGGTCGCGTACAGGAGGACCACCGAGGGCAGCAGCAGCTACAACGCGATCCTGTCCGTCACCGCGTCCCTGCGTCTGCCGCTGCCCATGAGGAAAACCTTCGATCTGCTCAGGAACCTTACTCACCGCTGCAAGTGGGACGTCCTGGTGCACGGCAGCGTGGTGAAGGAGGAGGTCACCATCGCCAGAGGCGTCGGGAACGACGACACTGTCACCGTCCTCCACTGCAAGCGCGCCGGCAGGGAGGACAGGGGAAGGACCATGATCCTGCAGAACAACGGGTACGACGCGTCGGGCTCGTTCATGGTCTACTCCCAGATCGACAGCGAGCTGATGAACACCATGGTCCTGAGCCCCAGCGACCTGCCGCCCGGGCGGGGCGGGCCGTCCCTCTACCCCACCGGCTTCTCCCTTCTCCCTGACGTCGAGGCTGCCCAGGACAGCAGCGGCATCGCCCTCGGCGAGGTTGGGGGAACTCTCATGACCATGGGCTTCCAGATTCCGGTGAAGCTCGCCAGTGGGGATCGCATGTATTCCCGGTCTGCGGCATCGGCAATCAGGCTCATGACTGACACCATTGCCCTCGTCAAGAAGACGCTGATGAACGAGCATTCTGGTATCTACGGGGTTAGCCCGTTCCACCCCTAGATTCAGAAAAACACCAGAGGGAGAAAAGGGAGGTCCGTGTGCAGATAAAAATCAAGAACATGCGAAGGGGATTCATCGGCTCCGATCACCCTGCATCTCCCAGAATTTGCTGAATTAATTAGAACTTTAAGGTTGTGTTAACAACCTGTAATAATGTTTTTAAGGCCAAACTTATATCGTGTCTTTGCTGTAATAATGTAGTATGCGCCTGATGGATGTCGACTGCCGTGTACCGATGCAGTTTGCTTCGCAGAGACGCGGATACATTTGCTATCGTATGGATGCTCCTTTAGAAGCAAAAAAAAAA] [+] EMBL BI799693 [ CCCAGAATTTGCTGAATTAATAAGAACTTTAAGGTTGTGTTAACAACCTGTAATAATGTTTTTAAGGCC AACTTATATCGTGTCTTTGCTGTAATAATGTAGTATGCGCCTGCTGGATGTCGACTGCCATGTACCCATGCAGTTTGCTTCGCAGAGACGCCGATACATTTGCTATCGTATGGATGCTACTTTAGAACCAAAA ] consensusID : consensus_10213#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2383 fasta sequence [AGTGAGAATTAGCTTTATAAAAATGTTTAGTGGGTATTAGCTTTATAAAAAGAAAGGATTCTATCCTGGTTGAATATATTGTGTATGTTGCAGTATGGTACTCCTTTCTGAGGAGAATTTCATCATGTGGGTTATCTTCATTTTTCTTGGATGAACAGGTTTTTCAGCATCTGTGGGCATCCCGATGATGGACAAAAGAGGCATCTGAGTGAGACAACAGGTCTTGGTTTAGATCAAGTGAAGTTTTGGTTTCAGAATAAAAGAACACAAGTAAAGACTATGTGCTGGAAGGAAGAGAACTATAAGTTGTCGGTGGAGAATGAAATTCTGAGGGATGAGAACAGGAGAGTTAAGATAGCTCACTGCACTGCTGTATGCCTCACTTGCTGTAATTCATCAGTACAGAACCAGCTTGCCGTTGAGATGGAAAGGTTAATGGGGCAGAGTGAGTGGCTGCAACAAGAGATTGCACGGTCGAATGGAACACCCCCGGCTGCAAACCTTGCCTTTCAACTTAATTCATCAGCAGACTATGTATTTTCAGGGCAACATGACCAACAAATGATTGCTGAACTAGCCAAAAACGCAATGCACGCATTGATTATTTTGGCCGAATCCCATGTCGCTCTATGGTTTCCCGTCCCTGGGCTGTTCTTATGAAGTATTGAACAAGATGGCTTATGACCAAGCATATCCTGGGGATAACAGTGCAAACGCCATTGGATTCAAGACAGAGGCTACTCGTGCAGTTTCTATGGTGATGATGGACTACAAAAGCGTTGTGGATTTCCTCATGGATCCTTACAACTACCGAACTTTCTTTCCTGAAGTTATTTCCGGGGCAGTAACCAACAGGATCTACACGTGGCCTACCAGTGATGGTTATAATGGGGTTATACAACTGATGACTGTCGAGATGATGTTCCCATCGCCCCTGGTACCGGCTAGGAAATGCACATTCCTGCGCTATTGTAATGTGCTGAACGAAGGATTAGTGGTCGTCATTGATGTGTCATTGGACGATGGCAGTATCTTCTCCAAATGCCGTAAAATGCCATCAGGGTTTCTGATCCAATCCATAAGGCCAAACAGCTGCAAGGTCACTGCCATAGAGCACGTCCTTGCGGATGACACCGGTGTTCATGAGCTCTACCAGCCTTGTATGAATGGACTCGTCTTCGGAGCTCGGCGCTGGGTGGCGACCATGGCGCGGCAGTCTGCACGCATGAGAGATGTTCATCACAACAAGACAGCTCCGCAAGTCAGCACGAAGGGGAGGAAGAATCTAATGAAGCTAGCGGACGACCTGCTCGCGAGCTTCGCCGGCGGCATCGCCGCCACTGGCGGAGGAACGTGGACCGTCGTGATCGGCGCCGGCACGGAGAAGGACATCAGGGTCGCGTACAGGAGGACCACCGAGGGCAGCAGCAGCTACAACGCGATCCTGTCCGTCACCGCGTCCCTGCGTCTGCCGCTGCCCATGAGGAAAACCTTCGATCTGCTCAGGAACCTTACTCACCGCTGCAAGTGGGACGTCCTGGTGCACGGCAGCGTGGTGAAGGAGGAGGTCACCATCGCCAGAGGCGTCGGGAACGACGACACTGTCACCGTCCTCCACTGCAAGCGCGCCGGCAGGGAGGACAGGGGAAGGACCATGATCCTGCAGAACAACGGGTACGACGCGTCGGGCTCGTTCATGGTCTACTCCCAGATCGACAGCGAGCTGATGAACACCATGGTCCTGAGCCCCAGCGACCTGCCGCCCGGGCGGGGCGGGCCGTCCCTCTACCCCACCGGCTTCTCCCTTCTCCCTGACGTCGAGGCTGCCCAGGACAGCAGCGGCATCGCCCTCGGCGAGGTTGGGGGAACTCTCATGACCATGGGCTTCCAGATTCCGGTGAAGCTCGCCAGTGGGGATCGCATGTATTCCCGGTCTGCGGCATCGGCAATCAGGCTCATGACTGACACCATTGCCCTCGTCAAGAAGACGCTGATGAACGAGCATTCTGGTATCTACGGGGTTAGCCCGTTCCACCCCTAGATTCAGAAAAACACCAGAGGGAGAAAAGGGAGGTCCGTGTGCAGATAAAAATCAAGAACATGCGAAGGGGATTCATCGGCTCCGATCACCCTGCATCTCCCAGAATTTGCTGAATTAATTAGAACTTTAAGGTTGTGTTAACAACCTGTAATAATGTTTTTAAGGCCAAACTTATATCGTGTCTTTGCTGTAATAATGTAGTATGCGCCTGATGGATGTCGACTGCCGTGTACCGATGCAGTTTGCTTCGCAGAGACGCGGATACATTTGCTATCGTATGGATGCTCCTTTAGAACCTATGTTGCCTCTTAATTTCTATGGGTGCTATTTTAGAAAAAAAAA] [+] EMBL AK121338 [AGTGAGAATTAGCTTTATAAAAATGTTTAGTGGGTATTAGCTTTATAAAAAGAAAGGATTCTATCCTGGTTGAATATATTGTGTATGTTGCAGTATGGTACTCCTTTCTGAGGAGAATTTCATCATGTGGGTTATCTTCATTTTTCTTGGATGAACAGGTTTTTCAGCATCTGTGGGCATCCCGATGATGGACAAAAGAGGCATCTGAGTGAGACAACAGGTCTTGGTTTAGATCAAGTGAAGTTTTGGTTTCAGAATAAAAGAACACAAGTAAAGACTATGTGCTGGAAGGAAGAGAACTATAAGTTGTCGGTGGAGAATGAAATTCTGAGGGATGAGAACAGGAGAGTTAAGATAGCTCACTGCACTGCTGTATGCCTCACTTGCTGTAATTCATCAGTACAGAACCAGCTTGCCGTTGAGATGGAAAGGTTAATGGGGCAGAGTGAGTGGCTGCAACAAGAGATTGCACGGTCGAATGGAACACCCCCGGCTGCAAACCTTGCCTTTCAACTTAATTCATCAGCAGACTATGTATTTTCAGGGCAACATGACCAACAAATGATTGCTGAACTAGCCAAAAACGCAATGCACGCATTGATTATTTTGGCCGAATCCCATGTCGCTCTATGGTTTCCCGTCCCTGGGCTGTTCTTATGAAGTATTGAACAAGATGGCTTATGACCAAGCATATCCTGGGGATAACAGTGCAAACGCCATTGGATTCAAGACAGAGGCTACTCGTGCAGTTTCTATGGTGATGATGGACTACAAAAGCGTTGTGGATTTCCTCATGGATCCTTACAACTACCGAACTTTCTTTCCTGAAGTTATTTCCGGGGCAGTAACCAACAGGATCTACACGTGGCCTACCAGTGATGGTTATAATGGGGTTATACAACTGATGACTGTCGAGATGATGTTCCCATCGCCCCTGGTACCGGCTAGGAAATGCACATTCCTGCGCTATTGTAATGTGCTGAACGAAGGATTAGTGGTCGTCATTGATGTGTCATTGGACGATGGCAGTATCTTCTCCAAATGCCGTAAAATGCCATCAGGGTTTCTGATCCAATCCATAAGGCCAAACAGCTGCAAGGTCACTGCCATAGAGCACGTCCTTGCGGATGACACCGGTGTTCATGAGCTCTACCAGCCTTGTATGAATGGACTCGTCTTCGGAGCTCGGCGCTGGGTGGCGACCATGGCGCGGCAGTCTGCACGCATGAGAGATGTTCATCACAACAAGACAGCTCCGCAAGTCAGCACGAAGGGGAGGAAGAATCTAATGAAGCTAGCGGACGACCTGCTCGCGAGCTTCGCCGGCGGCATCGCCGCCACTGGCGGAGGAACGTGGACCGTCGTGATCGGCGCCGGCACGGAGAAGGACATCAGGGTCGCGTACAGGAGGACCACCGAGGGCAGCAGCAGCTACAACGCGATCCTGTCCGTCACCGCGTCCCTGCGTCTGCCGCTGCCCATGAGGAAAACCTTCGATCTGCTCAGGAACCTTACTCACCGCTGCAAGTGGGACGTCCTGGTGCACGGCAGCGTGGTGAAGGAGGAGGTCACCATCGCCAGAGGCGTCGGGAACGACGACACTGTCACCGTCCTCCACTGCAAGCGCGCCGGCAGGGAGGACAGGGGAAGGACCATGATCCTGCAGAACAACGGGTACGACGCGTCGGGCTCGTTCATGGTCTACTCCCAGATCGACAGCGAGCTGATGAACACCATGGTCCTGAGCCCCAGCGACCTGCCGCCCGGGCGGGGCGGGCCGTCCCTCTACCCCACCGGCTTCTCCCTTCTCCCTGACGTCGAGGCTG CCAGGACAGCAGCGGCATCGCCCTCGGCGAGGTTGGGGGAACTCTCATGACCATGGGCTTCCAGATTCCGGTGAAGCTCGCCAGTGGGGATCGCATGTATTCCCGGTCTGCGGCATCGGCAATCAGGCTCATGACTGACACCATTGCCCTCGTCAAGAAGACGCTGATGAACGAGCATTCTGGTATCTACGGGGTTAGCCCGTTCCACCCCTAGATTCAGAAAAACACCAGAGGGAGAAAAGGGAGGTCCGTGTGCAGATAAAAATCAAGAACATGCGAAGGGGATTCATCGGCTCCGATCACCCTGCATCTCCCAGAATTTGCTGAATTAATTAGAACTTTAAGGTTGTGTTAACAACCTGTAATAATGTTTTTAAGGCCAAACTTATATCGTGTCTTTGCTGTAATAATGTAGTATGCGCCTGATGGATGTCGACTGCCGTGTACCGATGCAGTTTGCTTCGCAGAGACGCGGATACATTTGCTATCGTATGGATGCTC ] [+] EMBL AK059864 [ TCAGCACGAAGGGGAGGAAGAATCTAATGAAGCTAGCGGACGACCTGCTCGCGAGCTTCGCCGGCGGCATCGCCGCCACTGGCGGAGGAACGTGGACCGTCGTGATCGGCGCCGGCACGGAGAAGGACATCAGGGTCGCGTACAGGAGGACCACCGAGGGCAGCAGCAGCTACAACGCGATCCTGTCCGTCACCGCGTCCCTGCGTCTGCCGCTGCCCATGAGGAAAACCTTCGATCTGCTCAGGAACCTTACTCACCGCTGCAAGTGGGACGTCCTGGTGCACGGCAGCGTGGTGAAGGAGGAGGTCACCATCGCCAGAGGCGTCGGGAACGACGACACTGTCACCGTCCTCCACTGCAAGCGCGCCGGCAGGGAGGACAGGGGAAGGACCATGATCCTGCAGAACAACGGGTACGACGCGTCGGGCTCGTTCATGGTCTACTCCCAGATCGACAGCGAGCTGATGAACACCATGGTCCTGAGCCCCAGCGACCTGCCGCCCGGGCGGGGCGGGCCGTCCCTCTACCCCACCGGCTTCTCCCTTCTCCCTGACGTCGAGGCTGCCCAGGACAGCAGCGGCATCGCCCTCGGCGAGGTTGGGGGAACTCTCATGACCATGGGCTTCCAGATTCCGGTGAAGCTCGCCAGTGGGGATCGCATGTATTCCCGGTCTGCGGCATCGGCAATCAGGCTCATGACTGACACCATTGCCCTCGTCAAGAAGACGCTGATGAACGAGCATTCTGGTATCTACGGGGTTAGCCCGTTCCACCCCTAGATTCAGAAAAACACCAGAGGGAGAAAAGGGAGGTCCGTGTGCAGATAAAAATCAAGAACATGCGAAGGGGATTCATCGGCTCCGATCACCCTGCATCTCCCAGAATTTGCTGAATTAATTAGAACTTTAAGGTTGTGTTAACAACCTGTAATAATGTTTTTAAGGCCAAACTTATATCGTGTCTTTGCTGTAATAATGTAGTATGCGCCTGATGGATGTCGACTGCCGTGTACCGATGCAGTTTGCTTCGCAGAGACGCGGATACATTTGCTATCGTATGGATGCTCCTTTAGAACCTATGTTGCCTCTTAATTTCTATGGGT ] [+] EMBL C74009 [ CACCGTCCTCCACTGCAAGCGCGCCGGCAGGGAGGACAGGGGAAGGACCATGATCCTGCAGAACAACGGGTACGACGCGTCGGGCTCGTTCATGGTCTACTCCCAGATCGACAGCGAGCTGATGAACACCATGGTCCTGAGCCCCAGCGACCTGCCGNCCGGGCGGGGCGGGCCGTCCCTCTACCCCACCGGCTTCTCCCTTCTCCCTGACGTCGAGGCTGCCCAGGACAGCAGCGGCATCG CCTCGG GAGGTTGGGGGAACTCTCATGACCATGGGCTTCCAGATTCCGGTGAAGCTCGCCAGTGGGGATCGCATGTATTCCCGGTCTGCGGNATCGGNAATCAGGCTCATGACTGACAACATTGNCCTCGTCAAGAAGACGNTGATGAACGAGCATTCTGGTATCTACGGGGTTAAGCCGTTTCACCCTTAGATTAAG ] [+] EMBL AU029314 [ cCCCAGGACAGCAGCGGNATCGCCTTCGGCGAGGTTGGGGGAACTCTCATGACCATGGGCTTCCAGATTCCGGTGAAGCTCGCCAGTGGGGATCGCATGTATTCCCGGTCTGCGGCATCGGCAATCAGGCTCATGACTGACACCATTGCCCTCGTCAAGAAGACGCTGATGAACGAGCATTCTGGTATCTACGGGGTTAGCCCGTTCCACCCCTAGATTCAGAAAAACACCAGAGGGAGAAAAGGGAGGTCCGTGTGCAGATAAAAATCAAGAACATGCGAAGGGGATTCATCGGCTCCGATCACCCTGCATCTCCCAGAATTTGCTGAATTAATTAGAACTTTAAGGTTGTGTTAACAACCTGTAATAATGTTTTTAAGGCCAAACTTATATCGTGTCTTTGCTGTAATAATGTAGTATGCGCCTGATGGATGTCGACTGCCGTGTACCGATGCAGTNTTNTTCGCAGAGACGCGGATACATTTGCTATCGTATGGATGCTCCTTTAGAACCTATGTTGCCTCTTAATTTCTATGGGTGCTATTTTAGAAAAAAAAA] consensusID : consensus_10213#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 735 fasta sequence [TGACTCCGACAATATGTGCGGTGTTGATCAGCGCGCCGGCAGGGAGGACAGGGGAAGGACCATGATCCTGCAGAACAACGGGTACGACGCGTCGGGCTCGTTCATGGTCTACTCCCAGATCGACAGCGAGCTGATGAACACCATGGTCCTGAGCCCCAGCGACCTGCCGCCCGGGCGGGGCGGGCCGTCCCTCTACCCCACCGGCTTCTCCCTTCTCCCTGACGTCGAGGCTGCCCAGGACAGCAGCGGCATCGCCCTCGGCGAGGTTGGGGGAACTCTCATGACCATGGGCTTCCAGATTCCGGTGAAGCTCGCCAGTGGGGATCGCATGTATTCCCGGTCTGCGGCATCGGCAATCAGGCTCATGACTGACACCATTGCCCTCGTCAAGAAGACGCTGATGAACGAGCATTCTGGTATCTACGGGGTTAGCCCGTTCCACCCCTAGATTCAGAAAAACACCAGAGGGAGAAAAGGGAGGTCCGTGTGCAGATAAAAATCAAGAACATGCGAAGGGGATTCATCGGCTCCGATCACCCTGCATCTCCCAGAATTTGCTGAATTAATTAGAACTTTAAGGTTGTGTTAACAACCTGTAATAATGTTTTTAAGGCCAAACTTATATCGTGTCTTTGCTGTAATAATGTAGTATGCGCCTGATGGATGTCGACTGCCGTGTACCGATGCAGTTTGCTTCGCAGAGACGCGGATACATTTGCTATCGTATGGATGCTC] [+] EMBL AK071723 [TGACTCCGACAATATGTGCGGTGTTGATCAGCGCGCCGGCAGGGAGGACAGGGGAAGGACCATGATCCTGCAGAACAACGGGTACGACGCGTCGGGCTCGTTCATGGTCTACTCCCAGATCGACAGCGAGCTGATGAACACCATGGTCCTGAGCCCCAGCGACCTGCCGCCCGGGCGGGGCGGGCCGTCCCTCTACCCCACCGGCTTCTCCCTTCTCCCTGACGTCGAGGCTGCCCAGGACAGCAGCGGCATCGCCCTCGGCGAGGTTGGGGGAACTCTCATGACCATGGGCTTCCAGATTCCGGTGAAGCTCGCCAGTGGGGATCGCATGTATTCCCGGTCTGCGGCATCGGCAATCAGGCTCATGACTGACACCATTGCCCTCGTCAAGAAGACGCTGATGAACGAGCATTCTGGTATCTACGGGGTTAGCCCGTTCCACCCCTAGATTCAGAAAAACACCAGAGGGAGAAAAGGGAGGTCCGTGTGCAGATAAAAATCAAGAACATGCGAAGGGGATTCATCGGCTCCGATCACCCTGCATCTCCCAGAATTTGCTGAATTAATTAGAACTTTAAGGTTGTGTTAACAACCTGTAATAATGTTTTTAAGGCCAAACTTATATCGTGTCTTTGCTGTAATAATGTAGTATGCGCCTGATGGATGTCGACTGCCGTGTACCGATGCAGTTTGCTTCGCAGAGACGCGGATACATTTGCTATCGTATGGATGCTC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10213#1 ------------------------------------------------------------ consensus_10213#2 ------------------------------------------------------------ consensus_10213#0 TACAACAGAATCGAAATACAGAATACTGGGATAACGACACACTGGGAGTCACTTGCAACC 60 consensus_10213#1 ------------------------------------------------------------ consensus_10213#2 ------------------------------------------------------------ consensus_10213#0 TTTAGGGTTGAATCTCCGGAGATGGAAATGAATCAACAGCATAATGAGGGCAACGAATCT 120 consensus_10213#1 ------------------------------AGTGAGA-ATTAGCTTTATAAAA--ATGTT 27 consensus_10213#2 ------------------------------------------------------------ consensus_10213#0 TTCGTGGCCTTGATGAACGGTTTTGCTGGTGACGGGACGGCAACACTACCGAATGATGGG 180 consensus_10213#1 TAGTGG-GTATTAGCTTTATAAAAAGAAAGGATTCTATCCTGGTTGAATATA--TTGTGT 84 consensus_10213#2 ------------------------------------------------------------ consensus_10213#0 GAGCAGAGAATGAGTATTCCAGCAAGAGAATTATTTGCAGCAATTGAGGCCGACTCAGGC 240 consensus_10213#1 ATGTTGC--------AGTA-TGGTACTCCTTTCTGAGGAGAATTTCATC-ATGTGGGTTA 134 consensus_10213#2 ------------------------------------------------------------ consensus_10213#0 TTGTTGCCTGTGAACAGTAGCAACACTAATGAAAAAAGGAAGAGGCGTCTACAGAGGCTC 300 consensus_10213#1 TCTTCATTTTTCTTGGATGAAC-----AGGTTTTTCAGCATCTGTGGGCATCCCGATGAT 189 consensus_10213#2 ------------------------------------------------------------ consensus_10213#0 ACTGGCAAACAGTCGGAGGTACTTGAGGGGTTTTTCAGCATCTGTGGGCATCCCGATGAT 360 consensus_10213#1 GGACAAAAGAGGCATCTGAGTGAGACAACAGGTCTTGGTTTAGATCAAGTGAAGTTTTGG 249 consensus_10213#2 ------------------------------------------------------------ consensus_10213#0 GGACAAAAGAGGCATCTGAGTGAGACAACAGGTCTTGGTTTAGATCAAGTGAAGTTTTGG 420 consensus_10213#1 TTTCAGAATAAAAGAACACAAGTAAAGACTATGTGCTGGAAGGAAGAGAACTATAAGTTG 309 consensus_10213#2 ------------------------------------------------------------ consensus_10213#0 TTTCAGAATAAAAGAACACAAGTAAAGACTATGTGCTGGAAGGAAGAGAACTATAAGTTG 480 consensus_10213#1 TCGGTGGAGAATGAAATTCTGAGGGATGAGAACAGGAGAGTTAAGATAGCTCACTGCACT 369 consensus_10213#2 ------------------------------------------------------------ consensus_10213#0 TCGGTGGAGAATGAAATTCTGAGGGATGAGAACAGGAGAGTTAAGATAGCTCACTGCACT 540 consensus_10213#1 GCTGTATGCCTCACTTGCTGTAATTCATCAGTACAGAACCAGCTTGCCGTTGAGATGGAA 429 consensus_10213#2 ------------------------------------------------------------ consensus_10213#0 GCTGTATGCCTCACTTGCTGTAATTCATCAGTACAGAACCAGCTTGCCGTTGAGATGGAA 600 consensus_10213#1 AGGTTAATGGGGCAGAGTGAGTGGCTGCAACAAGAGATTGCACGGTCGAATGGAACACCC 489 consensus_10213#2 ------------------------------------------------------------ consensus_10213#0 AGGTTAATGGGGCAGAGTGAGTGGCTGCAACAAGAGATTGCACGGTCGAATGGAACACCC 660 consensus_10213#1 CCGGCTGCAAACCTTGCCTTTCAACTTAATTCATCAGCAGACTATGTATTTTCAGGGCAA 549 consensus_10213#2 ------------------------------------------------------------ consensus_10213#0 CCGGCTGCAAACCTTGCCTTTCAACTTAATTCATCAGCAGACTATGTATTTTCAGGGCAA 720 consensus_10213#1 CATGACCAACAAATGATTGCTGAACTAGCCAAAAACGCAATGCACGCATTGATTATTTTG 609 consensus_10213#2 ------------------------------------------------------------ consensus_10213#0 CATGACCAACAAATGATTGCTGAACTAGCCAAAAACGCAATGCACGCATTGATTATTTTG 780 consensus_10213#1 GCCGAATCCCATGTCGCTCTATGGTTTCCCGTCCCTGGGCTGTTCTTATGAAGTATTGAA 669 consensus_10213#2 ------------------------------------------------------------ consensus_10213#0 GCCGAATCCCATGTCGCTCTATGGTTTCCCGTCCCTGG-CTGTTCTTATGAAGTATTGAA 839 consensus_10213#1 CAAGATGGCTTATGACCAAGCATATCCTGGGGATAACAGTGCAAACGCCATTGGATTCAA 729 consensus_10213#2 ------------------------------------------------------------ consensus_10213#0 CAAGATGGCTTATGACCAAGCATATCCTGGGGATAACAGTGCAAACGCCATTGGATTCAA 899 consensus_10213#1 GACAGAGGCTACTCGTGCAGTTTCTATGGTGATGATGGACTACAAAAGCGTTGTGGATTT 789 consensus_10213#2 ------------------------------------------------------------ consensus_10213#0 GACAGAGGCTACTCGTGCAGTTTCTATGGTGATGATGGACTACAAAAGCGTTGTGGATTT 959 consensus_10213#1 CCTCATGGATCCTTACAACTACCGAACTTTCTTTCCTGAAGTTATTTCCGGGGCAGTAAC 849 consensus_10213#2 ------------------------------------------------------------ consensus_10213#0 CCTCATGGATCCTTACAACTACCGAACTTTCTTTCCTGAAGTTATTTCCGGGGCAGTAAC 1019 consensus_10213#1 CAACAGGATCTACACGTGGCCTACCAGTGATGGTTATAATGGGGTTATACAACTGATGAC 909 consensus_10213#2 ------------------------------------------------------------ consensus_10213#0 CAACAGGATCTACACGTGGCCTACCAGTGATGGTTATAATGGGGTTATACAACTGATGAC 1079 consensus_10213#1 TGTCGAGATGATGTTCCCATCGCCCCTGGTACCGGCTAGGAAATGCACATTCCTGCGCTA 969 consensus_10213#2 ------------------------------------------------------------ consensus_10213#0 TGTCGAGATGATGTTCCCATCGCCCCTGGTACCGGCTAGGAAATGCACATTCCTGCGCTA 1139 consensus_10213#1 TTGTAATGTGCTGAACGAAGGATTAGTGGTCGTCATTGATGTGTCATTGGACGATGGCAG 1029 consensus_10213#2 ------------------------------------------------------------ consensus_10213#0 TTGTAATGTGCTGAACGAAGGATTAGTGGTCGTCATTGATGTGTCATTGGACGATGGCAG 1199 consensus_10213#1 TATCTTCTCCAAATGCCGTAAAATGCCATCAGGGTTTCTGATCCAATCCATAAGGCCAAA 1089 consensus_10213#2 ------------------------------------------------------------ consensus_10213#0 TATCTTCTCCAAATGCCGTAAAATGCCATCAGGGTTTCTGATCCAATCCATAAGGCCAAA 1259 consensus_10213#1 CAGCTGCAAGGTCACTGCCATAGAGCACGTCCTTGCGGATGACACCGGTGTTCATGAGCT 1149 consensus_10213#2 ------------------------------------------------------------ consensus_10213#0 CAGCTGCAAGGTCACTGCCATAGAGCACGTCCTTGCGGATGACACCGGTGTTCATGAGCT 1319 consensus_10213#1 CTACCAGCCTTGTATGAATGGACTCGTCTTCGGAGCTCGGCGCTGGGTGGCGACCATGGC 1209 consensus_10213#2 ------------------------------------------------------------ consensus_10213#0 CTACCAGCCTCGTGTGAATGGACTCGTCTTCGGAGCTCGGCGCTGGGTGGCGACCATGGC 1379 consensus_10213#1 GCGGCAGTCTGCACGCATGAGAGATGTTCATCACAACAAGACAGCTCCGCAAGTCAGCAC 1269 consensus_10213#2 ------------------------------------------------------------ consensus_10213#0 GCGGCAGTCTGCACGCATGAGAGATGTTCATCACAACAAGACAGCTCCGCAAGTCAGCAC 1439 consensus_10213#1 GAAGGGGAGGAAGAATCTAATGAAGCTAGCGGACGACCTGCTCGCGAGCTTCGCCGGCGG 1329 consensus_10213#2 ------------------------------------------------------------ consensus_10213#0 GAAGGGGAGGAAGAATCTAATGAAGCTAGCGGACGACCTGCTCGCGAGCTTCGCCGGCGG 1499 consensus_10213#1 CATCGCCGCCACTGGCGGAGGAACGTGGACCGTCGTGATCGGCGCCGGCACGGAGAAGGA 1389 consensus_10213#2 ------------------------------------------------------------ consensus_10213#0 CATCGCCGCCACTGGCGGAGGAACGTGGACCGTCGTGATCGGCGCCGGCACGGAGAAGGA 1559 consensus_10213#1 CATCAGGGTCGCGTACAGGAGGACCACCGAGGGCAGCAGCAGCTACAACGCGATCCTGTC 1449 consensus_10213#2 ------------------------------------------------------------ consensus_10213#0 CATCAGGGTCGCGTACAGGAGGACCACCGAGGGCAGCAGCAGCTACAACGCGATCCTGTC 1619 consensus_10213#1 CGTCACCGCGTCCCTGCGTCTGCCGCTGCCCATGAGGAAAACCTTCGATCTGCTCAGGAA 1509 consensus_10213#2 ------------------------------------------------------------ consensus_10213#0 CGTCACCGCGTCCCTGCGTCTGCCGCTGCCCATGAGGAAAACCTTCGATCTGCTCAGGAA 1679 consensus_10213#1 CCTTACTCACCGCTGCAAGTGGGACGTCCTGGTGCACGGCAGCGTGGTGAAGGAGGAGGT 1569 consensus_10213#2 ------------------------------------------------------------ consensus_10213#0 CCTTACTCACCGCTGCAAGTGGGACGTCCTGGTGCACGGCAGCGTGGTGAAGGAGGAGGT 1739 consensus_10213#1 CACCATCGCCAGAGGCGTCGGGAACGACGACACTGTCACCGTCCTCCACTGCAAGCGCGC 1629 consensus_10213#2 ---------------------TGACTCCGACAATATGTGCGGTGTTGATC---AGCGCGC 36 consensus_10213#0 CACCATCGCCAGAGGCGTCGGGAACGACGACACTGTCACCGTCCTCCACTGCAAGCGCGC 1799 ** ***** * * ** * * ******* consensus_10213#1 CGGCAGGGAGGACAGGGGAAGGACCATGATCCTGCAGAACAACGGGTACGACGCGTCGGG 1689 consensus_10213#2 CGGCAGGGAGGACAGGGGAAGGACCATGATCCTGCAGAACAACGGGTACGACGCGTCGGG 96 consensus_10213#0 CGGCAGGGAGGACAGGGGAAGGACCATGATCCTGCAGAACAACGGGTACGACGCGTCGGG 1859 ************************************************************ consensus_10213#1 CTCGTTCATGGTCTACTCCCAGATCGACAGCGAGCTGATGAACACCATGGTCCTGAGCCC 1749 consensus_10213#2 CTCGTTCATGGTCTACTCCCAGATCGACAGCGAGCTGATGAACACCATGGTCCTGAGCCC 156 consensus_10213#0 CTCGTTCATGGTCTACTCCCAGATCGACAGCGAGCTGATGAACACCATGGTCCTGAGCCC 1919 ************************************************************ consensus_10213#1 CAGCGACCTGCCGCCCGGGCGGGGCGGGCCGTCCCTCTACCCCACCGGCTTCTCCCTTCT 1809 consensus_10213#2 CAGCGACCTGCCGCCCGGGCGGGGCGGGCCGTCCCTCTACCCCACCGGCTTCTCCCTTCT 216 consensus_10213#0 CAGCGACCTGCCGCCCGGGCGGGGCGGGCCGTCCCTCTACCCCACCGGCTTCTCCCTTCT 1979 ************************************************************ consensus_10213#1 CCCTGACGTCGAGGCTGCCCAGGACAGCAGCGGCATCGCCCTCGGCGAGGTTGGGGGAAC 1869 consensus_10213#2 CCCTGACGTCGAGGCTGCCCAGGACAGCAGCGGCATCGCCCTCGGCGAGGTTGGGGGAAC 276 consensus_10213#0 CCCTGACGTCGAGGCTGCCCAGGACAGCAGCGGCATCGCCCTCGGCGAGGTTGGGGGAAC 2039 ************************************************************ consensus_10213#1 TCTCATGACCATGGGCTTCCAGATTCCGGTGAAGCTCGCCAGTGGGGATCGCATGTATTC 1929 consensus_10213#2 TCTCATGACCATGGGCTTCCAGATTCCGGTGAAGCTCGCCAGTGGGGATCGCATGTATTC 336 consensus_10213#0 TCTCATGACCATGGGCTTCCAGATTCCGGTGAAGCTCGCCAGTGGGGATCGCATGTATTC 2099 ************************************************************ consensus_10213#1 CCGGTCTGCGGCATCGGCAATCAGGCTCATGACTGACACCATTGCCCTCGTCAAGAAGAC 1989 consensus_10213#2 CCGGTCTGCGGCATCGGCAATCAGGCTCATGACTGACACCATTGCCCTCGTCAAGAAGAC 396 consensus_10213#0 CCGGTCTGCGGCATCGGCAATCAGGCTCATGACTGACACCATTGCCCTCGTCAAGAAGAC 2159 ************************************************************ consensus_10213#1 GCTGATGAACGAGCATTCTGGTATCTACGGGGTTAGCCCGTTCCACCCCTAGATTCAGAA 2049 consensus_10213#2 GCTGATGAACGAGCATTCTGGTATCTACGGGGTTAGCCCGTTCCACCCCTAGATTCAGAA 456 consensus_10213#0 GCTGATGAACGAGCATTCTGGTATCTACGGGGTTAGCCCGTTCCACCCCTAGATTCAGAA 2219 ************************************************************ consensus_10213#1 AAACACCAGAGGGAGAAAAGGGAGGTCCGTGTGCAGATAAAAATCAAGAACATGCGAAGG 2109 consensus_10213#2 AAACACCAGAGGGAGAAAAGGGAGGTCCGTGTGCAGATAAAAATCAAGAACATGCGAAGG 516 consensus_10213#0 AAACACCAGAGGGAGAAAAGGGAGGTCCGTGTGCAGATAAAAATCAAGAACATGCGAAGG 2279 ************************************************************ consensus_10213#1 GGATTCATCGGCTCCGATCACCCTGCATCTCCCAGAATTTGCTGAATTAATTAGAACTTT 2169 consensus_10213#2 GGATTCATCGGCTCCGATCACCCTGCATCTCCCAGAATTTGCTGAATTAATTAGAACTTT 576 consensus_10213#0 GGATTCATCGGCTCCGATCACCCTGCATCTCCCAGAATTTGCTGAATTAATTAGAACTTT 2339 ************************************************************ consensus_10213#1 AAGGTTGTGTTAACAACCTGTAATAATGTTTTTAAGGCCAAACTTATATCGTGTCTTTGC 2229 consensus_10213#2 AAGGTTGTGTTAACAACCTGTAATAATGTTTTTAAGGCCAAACTTATATCGTGTCTTTGC 636 consensus_10213#0 AAGGTTGTGTTAACAACCTGTAATAATGTTTTTAAGGCCAAACTTATATCGTGTCTTTGC 2399 ************************************************************ consensus_10213#1 TGTAATAATGTAGTATGCGCCTGATGGATGTCGACTGCCGTGTACCGATGCAGTTTGCTT 2289 consensus_10213#2 TGTAATAATGTAGTATGCGCCTGATGGATGTCGACTGCCGTGTACCGATGCAGTTTGCTT 696 consensus_10213#0 TGTAATAATGTAGTATGCGCCTGATGGATGTCGACTGCCGTGTACCGATGCAGTTTGCTT 2459 ************************************************************ consensus_10213#1 CGCAGAGACGCGGATACATTTGCTATCGTATGGATGCTCCTTTAGAACCTATGTTGCCTC 2349 consensus_10213#2 CGCAGAGACGCGGATACATTTGCTATCGTATGGATGCTC--------------------- 735 consensus_10213#0 CGCAGAGACGCGGATACATTTGCTATCGTATGGATGCTCCTTTAGAAGCAAAAAAAAAA- 2518 *************************************** consensus_10213#1 TTAATTTCTATGGGTGCTATTTTAGAAAAAAAAA 2383 consensus_10213#2 ---------------------------------- consensus_10213#0 ---------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||