These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10219#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 889 fasta sequence [TGTTTGTGTCACGTTCGATTCTCCCAAGCTGATCTTGTGTCGCCGGAATTGAGCAGGGGGGGACGTGCCGCGACGGATCGAGGCGATGCGGCAGGCGGTCGGCTTGTGCAAGGCCCATCAACTTCGGCCGGCCGCGCTGCTGTCCCCGCGGCCGTTGCTCCGGCGAGCGTCCCCCTGCCTCCCTGCAGCGGGAGCGGGTGGGGAGCTCAGGAGGGCCAGCGCCGCGTCGCGG-TTGGTGGTCAGGAGGAGATGCCAAGAAGAGGAGCAGCAGCAACAGCAGGAGGAGGAAGAGCGGAGCAATGGCGGTGGTGGTGATGGGGAGCAAGAGCAGAGAACATTTCTCAGCTTGGAGGAGGCCGGGCTGGTGGAGATGTCCGGCCTCAGCACACACGAGCGATTCCTC-TGCCGCCTCA-CCATA-TCGTCGTTGAATCTCTTGAGAGTGATTTCGGAGCAAGAAGGCGTCCCCATTGAGGAGCTCAACGCAGGCCTTGTTTGCGACTGGTTCGTCAAGGACAAGCTCAAGAGGGAGCAGAACGTGGGCTCAGCTGTCCTGCAGTGGGACGACCCTGGTTTCTAGCTCCATCATCCGTTTATGGATGATGGTGATTTGGTGGTCTTGCCGGCGTCTCCACCGAGAAACAGGGTT-CATCAAGTCAACATTTTTC-TC-GGTTGATAGAG-CTCACTGATCACTTTCTTTGAATTAAAGAGGGTTCCTTTGTCTTGCGACACTCGTTGTGCCTAATTGGGCTTTTTACATGTCAGTACATGACGACCTGTATCACTTCCTTTGTATGCCAGAGACCAAAGCCAGAAACACAGCTTAATTACGAAGAATCAGTTTCAAGAATATATGGATCAGAAATTGCTGTCGGATTGTTTTCAAAAAAAA] [+] EMBL AK098916 [TGTTTGTGTCACGTTCGATTCTCCCAAGCTGATCTTGTGTCGCCGGAATTGAGCAGGGGGGGACGTGCCGCGACGGATCGAGGCGATGCGGCAGGCGGTCGGCTTGTGCAAGGCCCATCAACTTCGGCCGGCCGCGCTGCTGTCCCCGCGGCCGTTGCTCCGGCGAGCGTCCCCCTGCCTCCCTGCAGCGGGAGCGGGTGGGGAGCTCAGGAGGGCCAGCGCCGCGTCGCGG TTGGTGGTCAGGAGGAGATGCCAAGAAGAGGAGCAGCAGCAACAGCAGGAGGAGGAAGAGCGGAGCAATGGCGGTGGTGGTGATGGGGAGCAAGAGCAGAGAACATTTCTCAGCTTGGAGGAGGCCGGGCTGGTGGAGATGTCCGGCCTCAGCACACACGAGCGATTCCTC TGCCGCCTCA CCATA TCGTCGTTGAATCTCTTGAGAGTGATTTCGGAGCAAGAAGGCGTCCCCATTGAGGAGCTCAACGCAGGCCTTGTTTGCGACTGGTTCGTCAAGGACAAGCTCAAGAGGGAGCAGAACGTGGGCTCAGCTGTCCTGCAGTGGGACGACCCTGGTTTCTAGCTCCATCATCCGTTTATGGATGATGGTGATTTGGTGGTCTTGCCGGCGTCTCCACCGAGAAACAGGGTT CATCAAGTCAACATTTTTC TC GGTTGATAGAG CTCACTGATCGCTTTCTTTGAATTAAAGAGGGTTCCTTTGTCTTGCGACACTCGTTGTGCCTAATTGGGCTTTTTACATGTCAGTACATGACGACCTGTATCACTTCCTTTGTATGCCAGAGACCAAAGCCAGAAACACAG ] [+] EMBL AK062025 [ GTTTGTGTCACGTTCGATTCTCCCAAGCTGATCTTGTGTCGCCGGAATTGAGCAGGGGGGGACGTGCCGCGACGGATCGAGGCGATGCGGCAGGCGGTCGGCTTGTGCAAGGCCCATCAACTTCGGCCGGCCGCGCTGCTGTCCCCGCGGCCGTTGCTCCGGCGAGCGTCCCCCTGCCTCCCTGCAGCGGGAGCGGGTGGGGAGCTCAGGAGGGCCAGCGCCGCGTCGCGG TTGGTGGTCAGGAGGAGATGCCAAGAAGAGGAGCAGCAGCAACAGCAGGAGGAGGAAGAGCGGAGCAATGGCGGTGGTGGTGATGGGGAGCAAGAGCAGAGAACATTTCTCAGCTTGGAGGAGGCCGGGCTGGTGGAGATGTCCGGCCTCAGCACACACGAGCGATTCCTC TGCCGCCTCA CCATA TCGTCGTTGAATCTCTTGAGAGTGATTTCGGAGCAAGAAGGCGTCCCCATTGAGGAGCTCAACGCAGGCCTTGTTTGCGACTGGTTCGTCAAGGACAAGCTCAAGAGGGAGCAGAACGTGGGCTCAGCTGTCCTGCAGTGGGACGACCCTGGTTTCTAGCTCCATCATCCGTTTATGGATGATGGTGATTTGGTGGTCTTGCCGGCGTCTCCACCGAGAAACAGGGTT CATCAAGTCAACATTTTTC TC GGTTGATAGAG CTCACTGATCACTTTCTTTGAATTAAAGAGGGTTCCTTTGTCTTGCGACACTCGTTGTGCCTAATTGGGCTTTTTACATGTCAGTACATGACGACCTGTATCACTTCCTTTGTATGCCAGAGACCAAAGCCAGAAACACAGCTTAATTACGAAGAATCAGTTTCAAGAATATATGGATCAGAAATTGCTGTCG ] [+] EMBL OSS16346A [ TGAGCAGGGGGGGACGTGCCGCGACGGATCGAGGCGATGCGGCAGGCGGTCGGCTTGTNCAAGGCCCATCAACTTCGGCCGGCCGCGCTGCTGTCCCCGCGGCCGTTGCTCCGGCGAGCNTCCCCCTGCCTCCCTGCAGCGGGAGCGNGTGGGGAGCTCAGGAGGGCCAGCNCCGCGTCGCGGTTTGGTGGTCAGGAGGAGATGCCAAGAAGAGGAGCAGCAGCAACAGCAGGAGGAGGAAGAGCGGANAATTGGCGGTGGTGGTGATGGGGAGCAAGANCAGAGAACATTTCTCAGCTTNGAGGAGGCCGGGCTGGTGGAGATGTCCGGCCTCAGCACACACGAGCNATTCCTCTTGCCGCCTTACCCATATTCGTCGTTG ] [-] EMBL CB657825 [ GTGCCGCGACGGATCGAGGCGATGCGGCAGGCGGTCGGCTTGTGCAAGGCCCATCAACTTCGGCCGGCCGCGCTGCTGTCCCCGCGGCCGTTGCTCCGGCGAGCGTCCCCCTGCCTCCCTGCAGCGGGAGCGGGTGGGGAGCTCAGGAGGGCCAGCGCCGCGTCGCGG TTGGTGGTCAGGAGGAGATGCCAAGAAGAGGAGCAGCAGCAACAGCAGGAGGAGGAAGAGCGGAGCAATGGCGGTGGTGGTGATGGGGAGCAAGAGCAGAGAACATTTCTCAGCTTGGAGGAGGCCGGGCTGGTGGAGATGTCCGGCCTCAGCACACACGAGCGATTCCTT TGCCGCCTCA CCATA TCGTCGTTGAATCTCTTGAGAGTGATTTCGGAGCAAGAAGGCGTCCCCATTGAGGAGCTCAACGCAGGCCTTGTTTGCGACTGGTTCGTCAAGGACAAGCTCAAGAGGGAGCAGAACGTGGGCTCAGCTGTCCTGCAGTGGGACGACCCTGGTTTCTAGCTCCATCATCCGTTTATGGATGATGGTGATTTGGTGGTCTTGCCGGCGTCTCCACCGAGAAACAGGGTT CATCAAGTCAACATTTTTT TC GGTTGATAGAG CTCACTGATCACTTTCTTTGAATTAAAGAGGGTTCCTTTGTCTTGCGACACTCGTTGTGCCTAATTGGGCTTTTTACATGTCAGTACATGACGACCTGTATCACTTCCTTTGTATGCCAGAGACCAAAGCCAGAAACACAGCTTAATTACGAAGAATC ] [+] EMBL BQ908060 [ ccgGTCCTGCAGTGGGACGA CCTGGTTTCTAGCTCCATCATCCGTTTATGGATGATGGTGATTTGGTGGTCTTGCCGGCGTCTCCACCGAGAAACAGGGTT CATCAAGTCAACATTTTTC TC GGTTGAT GAG CTCACTGATCACTTTCTTTGAATTAAAGAGGGTTCCTTTGTCTTGCGACACTCGTTGTGCCTAATTGGGCTTTTTACATGTCAGTACATGACGACCTGTATCACTTCCTTTGTATGCCAGAGACCAAAGCCAGAAACACAGCTTAATTACGAAGAATCAGTTTCAAGAATATATGGATCAGAAATTGCTGTCGGATTGTTTTCAAAAAAAA] [+] EMBL AU101861 [ acCAGGGTTCCATCAAGTCAACATTTTTCNTCNGGTTGATAGAGCCTCACTGATCACTTTCTTTGAATTAAAGAGGG TCC TTG CTTGCGACACTCGTTGTGCCTAATTGGGCTTTTTACATGTCAGTACATGACGACCTGTATCACTTCCTTTGTATGCCAGAGACCAAAGCCAGAAACACAGCTTAATTACGAAGAATCAGTTTCAAGAATATATGGATCAGAAAaaaaaaaaa ] [+] EMBL BQ906065 [ CGACACTCGTTGTGCCTAATTGGGCTTTTTACATGTCAGTACATGACGACCTGTATCACTTCCTTTGTATGCCAGAGACC AAGCCAGAAACACAGCTTAATTACGCAGAATCAGTTTCAAGAAaaaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||