These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10230#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 3204 fasta sequence [CTCCTCCCCACCTTACTCCCCCCCGCTTCCACTCCCCCGAACCTTCCAGAACCTTCTCCCGCTCCCCCGCCGAGATGGATGACTCGGAGAACAACGCGCCGTCGACGCCGGGGTCGCCGGGGTTCAGCACAGACAGGCTGCCGCCGAACACCACCACCAGCCGCGGCGCCACCGACCCGTCCTCCTACTCGGACGACGACGACGACGACGTGGTTGGCGCGGAGGAGGCGGAGGTCGACCCCAACGTGCTCCCCGAGGACGACGGCGTCGTCGCCGCCGAGGAGGAGGAGGACGGGGAGGACCTCTTCAACGACAACTACCTCGATGATTACCGGAGGATGGATGAGCAGGACCAGTATGAATCGG-TTGGGTTAGATGACTCGATAGAGGATGAAAGGAACCTGGATGAGATCATGGCAGATAGAAGGGCTGCTGAAGCAGAACTTGATGCAAGGGATGTGAGGACTGGTGCAGCACCTGATAGGAAATTGCCACGGATGCTACATGATCAAGACACAGATGAGGATATGAGCTTCAGGCGTCCTAAAAGGCACAGAGCTAATTTTAGACCACCAAGGGAACCAAGAACACCAAGAAGTGATGATGACGGTGAT-GGTGCCACGCCTAG-TTCACCTGGAAGATCTCAGCGTGGAATGTATTCTGGAGGGGATGTACCTATGACTGACCAGACTGATGATGATCCGTATGAGGATGAATTTGATGAAGAAGATGAGATGAACATGTACCGTGTACAAGGAACTCTTAGAGAGTGGGTCACAAGAGATGAAGTCCGCCGCTTTATCGCAAAGAAGTTCAAAGAATTCCTTCTAACATATGTAAACCCAAAGAATGAACAAGGAGAGTTTGAGTATGTTCGACTAATCAATGAGATGGTTCTAGCTAACAAATGCAGCTTAGAGATAGATTACAAGCAATTTATTTATATACATCCAAACATTGCTATATGGTTGGCTGATGCACCTCAATCGGTGCTAGAAGTTATGGAGGAAGTTGCCAAAAATGTTGTTTTTGATCTCCATAAGAACTATAGGAACATTCATCAAAAAATCTATGTCCGAATAACCAATCTTCCTGTCTACGACCAAATACGCAATATCAGGCAAATCCATCTGAACACAATGATTCGAATTGGTGGTGTTGTTACTCGGAGATCAGGTGTTTTTCCTCAGCTACAACAGGTCAAGTTTGACTGCAGCAAATGTGGGACTGTCCTGGGCCCCTTCTTCCAGAACTCTTACACTGAAGTCAAGGTTGGATCCTGCCCTGAGTGCCAATCCAAAGGGCCATTCACCATCAATGTTGAGCAAACCATATATAGGAACTACCAGAAACTCACTCTTCAGGAAAGCCCAGGAATTGTTCCTGCTGGCAGGCTTCCAAGATACAAGGAAGTGATACTTCTGAATGATTTGATTGACTGTGCTCGACCAGGAGAGGAAATTGAGGTCACTGGGATATACACCAACAATTTTGACTTGTCTTTGAATACAAAGAATGGTTTCCCAGTTTTTGCCACAGTAGTGGAGGCAAACTATGTGGCAAAAAAACAGGATCTGTTCTCTGCTTACAAATTAACTGATGAGGACAAGGCGGAGATTGAGAAGTTGGCAAAAGATCCACGGATCGGTGAAAGGATTGTCAAATCAATTGCACCATCCATATATGGTCATGAAGATATCAAGACTGCCATTGCACTAGCTATGTTTGGGGGGCAAGAGAAGAATGTCAAGGGAAAGCATCGCTTGAGAGGAGATATCAATGTACTCCTCTTAGGTGATCCAGGCACTGCAAAATCCCAATTTCTCAAGTATGTTGAGAAAACTGGACACAGAGCAGTGTACACAACTGGAAAAGGAGCTTCTGCTGTTGGACTCACCGCAGCAGTTCACAAGGATCCAGTAACACGGGAATGGACACTTGAGGGTGGTGCACTAGTGCTTGCTGATAGAGGCATATGCCTTATTGATGAATTTGATAAGATGAACGATCAAGATAGGGTGAGTATTCATGAGGCCATGGAGCAACAAAGTATCAGTATATCAAAGGCCGGAATTGTCACATCCCTTCAAGCTCGGTGCAGTGTTATTGCTGCAGCAAACCCAATAGGAGGAAGATATGATTCATCGAAGACATTCACCCAGAATGTTGAACTGACGGATCCAATTATTTCACGTTTTGATGTCCTTTGTGTTGTGAAGGACATTGTTGACCCATTTACAGATGAAATGCTTGCAAGGTTTGTTGTAGATAGTCATGCAAGATCTCAACCCAAGGGTGCTAACCTTGAAGATAGGGTTCCAACTGATGTTGAGGATGATCCATTGGCTGCTGCCAGACAAGCTGACCCAGATATCCTTT--CTCAAGACATGCTGAAGAAG-TACATAACTTATGCCAAGTTGAA-CGTGTTTCCC-AAAATT-CATGA-TGCTGACC--TGGACAAGA-TTAG-CCATGTTTA-CG-CAGAACTTCGTCGTGAGT-CATC-TCATGGT-CAAGGAGTCCCTATTGCCGTAAGG-CATATCGAATCCATTATT-CGGATGTCAGAGGCACATGCAAGGATGCATTTGAGGAGCTACGTGTCTCAGGAAGATGTCGACATGGCTATCCGCGTCCTGCTTGACTCATTTATTTCAACTCAGAAGTTTGGTGTACAGAAAGCACTTCAAAAGAATTTCAGGAAATACATGACCTATAAGAAGGATTACAATGAGCTGCTCTTGCTTCTTCTGCGCACCCTGGTCAAGGATGTGCTGCACTTCGAAGAAATCGTTTCAGGACCAACGACGCGCCTGACTCACATCGAGGTTAAAGTAGAGGACCTGAAGAACAAGGCCCAGGAGTACGAAATCTATGACCTGAGACCGTTCTTCTCCAGCGCCCACTTCAGGGACAACAACTTCGTCCTCGACGAAGGGCGGGGGATCATCAGGCACCCTCTTGCTGCCTAACTACAGAAGA---TCATCTGTGACCCATCTGACAATGAACAATTTGAGCTACCTCATGGGATTATCAGACATAGTGTAATCATCAAATGGCAACTCCTTTGTGCTTTTTAGAGACTGTTGCATGTTATCCAGCTGCATTTGGATAGGGTGTACCGTGTGTACTTTCTTAACATTGTAATTCTGCAAGTATGGTAGAAAATGATAAATCTGTGTCAATCAATGTATCATTGTTTTGCATTAAAAAAAA] [+] EMBL AK121422 [CTCCTCCCCACCTTACTCCCCCCCGCTTCCACTCCCCCGAACCTTCCAGAACCTTCTCCCGCTCCCCCGCCGAGATGGATGACTCGGAGAACAACGCGCCGTCGACGCCGGGGTCGCCGGGGTTCAGCACAGACAGGCTGCCGCCGAACACCACCACCAGCCGCGGCGCCACCGACCCGTCCTCCTACTCGGACGACGACGACGACGACGTGGTTGGCGCGGAGGAGGCGGAGGTCGACCCCAACGTGCTCCCCGAGGACGACGGCGTCGTCGCCGCCGAGGAGGAGGAGGACGGGGAGGACCTCTTCAACGACAACTACCTCGATGATTACCGGAGGATGGATGAGCAGGACCAGTATGAATCGG TTGGGTTAGATGACTCGATAGAGGATGAAAGGAACCTGGATGAGATCATGGCAGATAGAAGGGCTGCTGAAGCAGAACTTGATGCAAGGGATGTGAGGACTGGTGCAGCACCTGATAGGAAATTGCCACGGATGCTACATGATCAAGACACAGATGAGGATATGAGCTTCAGGCGTCCTAAAAGGCACAGAGCTAATTTTAGACCACCAAGGGAACCAAGAACACCAAGAAGTGATGATGACGGTGAT GGTGCCACGCCTAG TTCACCTGGAAGATCTCAGCGTGGAATGTATTCTGGAGGGGATGTACCTATGACTGACCAGACTGATGATGATCCGTATGAGGATGAATTTGATGAAGAAGATGAGATGAACATGTACCGTGTACAAGGAACTCTTAGAGAGTGGGTCACAAGAGATGAAGTCCGCCGCTTTATCGCAAAGAAGTTCAAAGAATTCCTTCTAACATATGTAAACCCAAAGAATGAACAAGGAGAGTTTGAGTATGTTCGACTAATCAATGAGATGGTTCTAGCTAACAAATGCAGCTTAGAGATAGATTACAAGCAATTTATTTATATACATCCAAACATTGCTATATGGTTGGCTGATGCACCTCAATCGGTGCTAGAAGTTATGGAGGAAGTTGCCAAAAATGTTGTTTTTGATCTCCATAAGAACTATAGGAACATTCATCAAAAAATCTATGTCCGAATAACCAATCTTCCTGTCTACGACCAAATACGCAATATCAGGCAAATCCATCTGAACACAATGATTCGAATTGGTGGTGTTGTTACTCGGAGATCAGGTGTTTTTCCTCAGCTACAACAGGTCAAGTTTGACTGCAGCAAATGTGGGACTGTCCTGGGCCCCTTCTTCCAGAACTCTTACACTGAAGTCAAGGTTGGATCCTGCCCTGAGTGCCAATCCAAAGGGCCATTCACCATCAATGTTGAGCAAACCATATATAGGAACTACCAGAAACTCACTCTTCAGGAAAGCCCAGGAATTGTTCCTGCTGGCAGGCTTCCAAGATACAAGGAAGTGATACTTCTGAATGATTTGATTGACTGTGCTCGACCAGGAGAGGAAATTGAGGTCACTGGGATATACACCAACAATTTTGACTTGTCTTTGAATACAAAGAATGGTTTCCCAGTTTTTGCCACAGTAGTGGAGGCAAACTATGTGGCAAAAAAACAGGATCTGTTCTCTGCTTACAAATTAACTGATGAGGACAAGGCGGAGATTGAGAAGTTGGCAAAAGATCCACGGATCGGTGAAAGGATTGTCAAATCAATTGCACCATCCATATATGGTCATGAAGATATCAAGACTGCCATTGCACTAGCTATGTTTGGGGGGCAAGAGAAGAATGTCAAGGGAAAGCATCGCTTGAGAGGAGATATCAATGTACTCCTCTTAGGTGATCCAGGCACTGCAAAATCCCAATTTCTCAAGTATGTTGAGAAAACTGGACACAGAGCAGTGTACACAACTGGAAAAGGAGCTTCTGCTGTTGGACTCACCGCAGCAGTTCACAAGGATCCAGTAACACGGGAATGGACACTTGAGGGTGGTGCACTAGTGCTTGCTGATAGAGGCATATGCCTTATTGATGAATTTGATAAGATGAACGATCAAGATAGGGTGAGTATTCATGAGGCCATGGAGCAACAAAGTATCAGTATATCAAAGGCCGGAATTGTCACATCCCTTCAAGCTCGGTGCAGTGTTATTGCTGCAGCAAACCCAATAGGAGGAAGATATGATTCATCGAAGACATTCACCCAGAATGTTGAACTGACGGATCCAATTATTTCACGTTTTGATGTCCTTTGTGTTGTGAAGGACATTGTTGACCCATTTACAGATGAAATGCTTGCAAGGTTTGTTGTAGATAGTCATGCAAGATCTCAACCCAAGGGTGCTAACCTTGAAGATAGGGTTCCAACTGATGTTGAGGATGATCCATTGGCTGCTGCCAGACAAGCTGACCCAGATATCCTTT CTCAAGACATGCTGAAGAAG TACATAACTTATGCCAAGTTGAA CGTGTTTCCC AAAATT CATGA TGCTGACC TGGACAAGA TTAG CCATGTTTA CG CAGAACTTCGTCGTGAGT CATC TCATGGT CAAGGAGTCCCTATTGCCGTAAGG CATATCGAATCCATTATT CGGATGTCAGAGGCACATGCAAGGATGCATTTGAGGAGCTACGTGTCTCAGGAAGATGTCGACATGGCTATCCGCGTCCTGCTTGACTCATTTATTTCAACTCAGAAGTTTGGTGTACAGAAAGCACTTCAAAAGAATTTCAGGAAATACATGACCTATAAGAAGGATTACAATGAGCTGCTCTTGCTTCTTCTGCGCACCCTGGTCAAGGATGTGCTGCACTTCGAAGAAATCGTTTCAGGACCAACGACGCGCCTGACTCACATCGAGGTTAAAGTAGAGGACCTGAAGAACAAGGCCCAGGAGTACGAAATCTATGACCTGAGACCGTTCTTCTCCAGCGCCCACTTCAGGGACAACAACTTCGTCCTCGACGAAGGGCGGGGGATCATCAGGCACCCTCTTGCTGCCTAACTACAGAAGA TCATCTGTGACCCATCTGACAATGAACAATTTGAGCTACCTCATGGGATTATCAGACATAGTGTAATCATCAAATGGCAACTCCTTTGTGCTTTTTAGAGACTGTTGCATGTTATCCAGCTGCATTTGGATAGGGTGTACCGTGTGTACTTTCTTAACATTGTAATTCTGCAAGTATGGTAGAAAATGATAAATCTGTGTCAATCAATGTATCATTGTTTTGCAT ] [+] EMBL C97557 [ cCCCCACCTTACTCCCCCCCGCTTCCACTCCCCCGAACCTTCCAGAACCTTCTCCCGCTCCCCCGCCGAGATGGATGACTCGGAGAACAACGCGCCGTCGACGCCGGGGTCGCCGGGGTTCAGCACAGACAGGCTGCCGCCGAACACCACCACCAGCCGCGGCGCCACCGACCCGTCCTCCTACTCGGACGACGACGACGACGACGTGGTTGGCGCGGAGGAGGCGGAGGTCGACCCCAACGTGCTCCCCGAGGACGACGGCGTCGTCGCCGCCGAGGAGGAGGAGGACGGGGAGGACCTCTTCAACGACAACTACCTCGATGATTACCGGAGGATGGATGAGCAGGACCAGTATGAATCGG TTGGGTTAGATGACTCGATAGAGGATGAAAGGAACCTGGATGAGATCATGGCAGATAGAANGGCTGCTGAAGCAGAACTTGATGCAAGGGATGTTAGGACTGGTGCAGCACCTGATANGAAATTGCCACGGATGCTACATGATCAAGACACAGATGAGGATATGAGCTTCAGGCGTCCTAAAAGGCACAGAGCTAATTTTAGACCACCAAGGGAACCAAGAACACCAAGAAGTGATGATGACGGTGATGGGTGCCACGCCTAGTTTCACCTGG ] [+] EMBL CB635156 [ TACTACTCTTCGCTTCCACTCCCCCGAACCTTCCAGAACCTTCTCCCGCTCCCCCGCCGAGATGGATGACTCGGAGAACAACGCGCCGTCGACGCCGGGGTCGCCGGGGTTCAGCACAGACAGGCTGCCGCCGAACACCACCACCAGCCGCGGCGCCACCGACCCGTCCTCCTACTCGGACGACGACGACGACGACGTGGTTGGCGCGGAGGAGGCGGAGGTCGACCCCAACGTGCTCCCCGAGGACGACGGCGTCGTCGCCGCCGAGGAGGAGGAGGACGGGGAGGACCTCTTCAACGACAACTACCTCGATGATTACCGGAGGATGGATGAGCAGGACCAGTATGAATCGG TTGGGTTAGATGACTCGATAGAGGATGAAAGGAACCTGGATGAGATCATGGCAGATAGAAGGGCTGCTGAAGCAGAACTTGATGCAAGGGATGTGAGGACTGGTGCAGCACCTGATAGGAAATTGCCACGGATGCTACATGATCAAGACACAGATGAGGATATGAGCTTCAGGCGTCCTAAAAGGCACAGAGCTAATTTTAGACCACCAAGGGAACCAAGAACACCAAGAAGTGATGATGACGGTGAT GGTGCCATGCCTAG TTCACCTGGAAGATCTCAGCGTGGAATGTATTCTGGAGGGGATGTACCTATGACTGACCAGACTGATGATGATCCATATGAGGATGAATTTGATGAAGAAGATGAGATGAA ] [+] EMBL AU222855 [ ACTCCCCCGAACCTTCCAGAACCTTCTCCCGCTCCCCCGCCGAGATGGATGACTCGGAGAACAACGCGCCGTCGACGCCGGGGTCGCCGGGGTTCAGCACAGACAGGCTGCCGCCGAACACCACCACCAGCCGCGGCGCCACCGACCCGTCCTCCTACTCGGACGACGACGACGACGACGTGGTTGGCGCGGAGGAGGCGGAGGTCGACCCCAACGTGCTCCCCGAGGACGACGGCGTCGTCGCCGCCGAGGAGGAGGAGGACGGGGAGGACCTCTTCAACGACAACTACCTCGATGATTACCGGAGGATGGATGAGCAGGACCAGTATGAATCGGTTTGGGTTAGATGACTCGATAGAGGATGAAAGGAACCTGGATGAGATCATGGCAGATAGAAGGGCTGCTGAAGCAGAACTTGATGCAAGGGATGTGAGGACTGGTGCAGCACCTGATAGGAAA ] [+] EMBL C97558 [ tgnccCCAAGAT TCCTTTTCCNCAAGACATGCTGAAGAAGTTCCNTTACTTATGCCAAGTTGAACCGTGTTCCCCAAAAATTNCATGATTGCTGGCCCTTGGACAAGATTTAGCCCATTTTTACCGCCAGAA TTCGTCGTGAGTCCATCNCCATGGTCCAAGGAGTCCCTATTGCCGTAAGGNCTTATCGAACCCATTATTCCGGATGTCAGAGGCACATGCAAGGATCCATTTGAGGAGCTACGTGTCTCAGGAAGATGTCGACATGGCTATCCGCGTCCTGCTTGACTCATTTATTTCAACTCAGAAGTTTGGTGTACAGAAAGCACTTCAAAAGAATTTCAGGAAATACATGACCTATAAGAAGGATTACAATGAGCTGCTCTTGCTTCTTCTGCGCACCCTGGTCAAGGATGTGCTGCACTTCGAAGAAATCGTTTCAGGACCAACGACGCGCCTGACTCACATCGAGGTTAAAGTAGAGGACCTGAAGAACAAGGCCCAGGAGTACGAAATCTATGACCTGAGACCGTTCTTCTCCAGCGCCCACTTCAGGGACAACAA TTCGTCCTCGACGAAGGGCGGGGGATCATCAGGCACCCTCTTGCTGCCTAACTACAGAAGA TCATCTGTGACCCATCTGACAATGAACAATTTGAGCTACCTCATGGGATTATCAGACATAGTGTAATCATCAAATGGCAACTCCTTTGTGCTTTTTAGAGACTGTTGCATGTTATCCAGCTGCATTTGGATAGGGTGTACCGTGTGTACTTTCTTAACATTGTAATTCTGCAAGTATGGTAGAAAATGATAAATCTGTGTCAATCAATGTATCATTGTTTTGCATTAAAAAAAA] [-] EMBL CB635157 [ AATT CATGA TGCTGACC TGGACAAGA TTAG CCATGTTTA TG CAGAACTTCGTCGCGAGT CATC TCATGGT CAAGGAGTCCCTATTGCTGTAAGG CATATCGAATCCATTATT CGGATGTCAGAGGCACATGCAAGGATGCATTTGAGGAGCTACGTGTCTCAGGAAGATGTCGACATGGCTATCCGCGTCCTGCTTGACTCATTTATTTCAACTCAGAAGTTTGGTGTACAGAAAGCACTTCAAAAGAATTTCAGGAAATACATGACCTATAAGAAGGATTACAATGAGCTGCTCTTGCTTCTTCTGCGCACCCTGGTCAAGGATGTGCTGCACTTCGAAGAAATCGTTTCAGGACCAACGACGCGCCTGACTCACATCGAGGTTAAAGTAGAGGACCTGAAGAACAAGGCCCAGGAGTACGAAATCTATGACCTGAGACCGTTCTTCTCCAGCGCCCACTTCAGGGACGACAACTTCGTCCTCGACGAAGGGCGGGGGATCATCAGGCACCCTCTTGCTGCCTAACTACAGAAGATCGTCATCTGTGACCCATCTGACAATGAACAATTTGAGCTACCTCATGGGATTATCAGACATAGTGTAATCATCAAATGGCAACTCCTTTGTGCTTTTTAGAGACTGTTGCATGTTATCCAGCTGCATTTGGATAGGGTGTACCGTGTGTACTTTCTTAACATTGTAATTCTGCAAGGATGGTAGAAAATGATAAATCTGTGTCAATCAAACTATatgga ] [+] EMBL AU222856 [ CAAGGATGTGCTGCACTTCGAAGAAATCGTTTCAGGACCAACGACGCGCCTGACTCACATCGAGGTTAAAGTAGAGGACCTGAAGAACAAGGCCCAGGAGTACGAAATCTATGACCTGAGACCGTTCTTCTCCAGCGCCCACTTCAGGGACAACAACTTCGTCCTCGACGAAGGGCGGGGGATCATCAGGCACCCTCTTGCTGCCTAACTACAGAAGA TCATCTGTGACCCATCTGACAATGAACAATTTGAGCTACCTCATGGGATTATCAGACATAGTGTAATCATCAAATGGCAACTCCTTTGTGCTTTTTAGAGACTGTTGCATGTTATCCAGCTGCATTTGGATAGGGTGTACCGTGTGTACTTTCTTAACATTGTAATTCTGCAAGTATGGTAGAAAATGATAAATCTGTGTCAATCAATGTATCAaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||