These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10250#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1113 fasta sequence [GTGAGTACAGCATGCCTAAAGAAAAAGGAGGTGCAAACAAAAAGCTCAAAGCGGAAAAGAAATTGGCTTGATAAGATGCACAAGTCCACAGAGAAAGGAAGTAAGAAGGGAGGTAAGAAAAAGGAAAAAGGATCAAAGGAACAAGGAACTATAAAGAAGGGAGGGAAAAAAAAGGAAAAAGAAGCAACGGTACAAGACAGTGCAGCGGTGCAAAATATTTATCCTAATACTTC-TTTGCCCATGGAAGAATTGTCTGAACCATACATGGCCATCAATACCTTCTCTCAGATATTGACGGGGCCAATTACAGATGATGTTTTGGCTGATTTCTAGTAGCATGGACAGTTGCTGCAATCTGAAATATAACAGATTGTTTAGGGGGATAGCTTTTGCTTTTGTCGAAGTGTAAAGTTCAGGGAATTGCAGAATTGCATTTCTGAATAGCAGAGCATTTTGTGCATCTCTGAACTTGCAACATTCAGAATTACCTTTTATTCAATTCCAAACAATTTACAACACAATGACAATCACAAGTTACAGTCTTGCTAGCTCTAGCACAAATGTCACTTCACAAGCAAGACAACCTTCCTCTGTTACTCACTGAAAATTTCAGACATAGCACACGATGAATAAAACACACTGGAAATTTCAGATATATCGACTCCAATCACTGCTATCCTACAGACATCATTTTCAGATATGTCGACTCCAATCCCTGCTATCGTACAGACATCTTCTAGCTTAATTGGAATCACGGCTGTGGCAACCCTCCAGCGGGTCCTATCCATTCTGAGACATGCTACAATTGTTGCGCTGCCTGACGAGGCCATGCTGCTGCAGCAGAAGCTGTACCGCGGCGTGCGGGGCAGCCGCAGTGGGGCAAGTGGGTGGCGTAGATCCGGCTGCCGCAGAACCGGGTGCGCGTCTGGCTCGGCACCTACGACTCGGCGACGGAGTAGCGCTCGGCGAGGACGGCGACGGAGCAGCGCTCGGCGGGATGGCGCGGCGCTGCTCTCGGCGAGGACGGCGCCGCTCTAGGTGACGACGGCGACGGGACGGTCCTCCATCCTCGACTGCAAGTCCGGATGACGTGGTGGCAGTGAACCCTTTCCT] [+] EMBL AU085729 [GTGAGTCCAGCNTGCCTAAAGAAAAAGGAGNTGCAAACAAAAAGCTCAAAGCGGAAAAGAAATTGGCTTGATAAGATGCACAAGTCCACAGAGAAAGGAAGTAAGAAGGGAGGTAAGAAAAAGGAAAAAGGATCAAAGGAACAAGGAACTATAAAGAAGGGAGGGAAAAAAAAGGAAAAAGAAGCAACGGTACAAGACAGTGCAGCGGTGCAAAATATTTATCCTAATACTTC TTTGCCCATGGAAGAATTGTCTGAACCATACATGGCCATCAATACCTTCTCTCAGATATTGACGGGGCC ATTACAGATGATGTTTTGGCTGATTTCTAGTAGCATGGACAGTTGCTGCAATCTGAAATATAACAGATTGTTTAGGGGGATAGCTTTTGCTTTTGTCGAAGTGTAAAGTTCAGGGAATTGCAGAATTGCATTTCTGAATAGCAGAGCATTTTGTGCATCTCTGAACTTGCAACATTCAGAATTACCTTTTATTCAATTCCAAACAATTTACAACACAATGACAATCACAAGTTACAGTCTTGCTAGCTCTAGCACAAATGTCACTTCACAAGCAAGACAACCTTCCTCTGTTACTCACTGAAAATTTCAGACATAGCACACGATGAATAAAACACACTGGAAATTTCAGATAaaaaaa ] [+] EMBL AU077517 [GTGAGTACAGCATGCCTAAAGAAAAAGGAGGTGCAAACAAAAAGCTCAAAGCGGAAAAGAAATTGGCTTGATAAGATGCACAAGTCCACAGAGAAAGGAAGTAAGAAGGGAGGTAAGAAAAAGGAAAAAGGATCAAAGGAACAAGGAACTATAAAGAAGGGAGGGAAAAAAAAGGAAAAAGAAGCAACGGTACAAGACAGTGCAGCGGTGCAAAATATTTATCCTAATACTTC TTTGCCCATGGAAGAATTGTCTGAACCATACATGGCCATCAATACCTTCTCTCAGATATTGACGGGGCCAATTACAGATGATGTTTTGGCTGATTTCTAGTAGCATGGACAGTTGCTGCAATCTGAAATATAACAGATTGTTTAGGGGGATAGCTTTTGCTTTTGTCGAAG ] [+] EMBL C27508 [GTGAGTACAGCATGCCTAAAGAAAAAGGAGGTGCAAACAAAAAGCTCAAAGCGGAAAAGAAATTGGCTTGATAAGATGCACAAGTCCACAGAGAAAGGAAGTAAGAAGGGAGGTAAGAAAAAGGAAAAAGGATCAAAGGAACAAGGAACTATAAAGAAGGGAGGGAAAAAAAAGGAAAANGAAGCAACGGTACANGACAGTGCAGCGGTGCAAAATATTTATCCTAATACTTCTTTTGCCCATGGANGATTTGTCTG ACCNTACATGGCC TCATTTCCTTCT ] [+] EMBL AU077518 [ GAAAAAAAAGGAAAAAGAAGCAACGGTACAAGACAGTGCAGCGGTGCAAAATATTTATCCTAATACTTC TTTGCCCATGGAAGAATTGTCTGAACCATACATGGCCATCAATACCTTCTCTCAGATATTGACGGGGCCAATTNCAGATGATGTTTTGGCTGATTTCTAGTAGCATGGACAGTTGCTGCAATCTGAAATATANCAGATTGTTTAGGGGGATAGCTTTTGCTTTTGTCGAAGTGTAAAGTTCAGGGAATTGCAGAATTGCATTTCTGAATAGCAGAGCATTTTGTGCATCTCTGAACTTGCAACATTCAGAATTACCTTTTATTCAATTCCAAACAATTTACAACACAATGACAATCACAAGTTACAGTCTTGCTAGCTCTAGCACAAATGTCACTTCACAAGCAAGACAACCTTCCTCTGTTACTCACTGAAAATTTCAGACATAGCACACGATGAATAAAACACACTGGAAATTTCAGATAaaaaaa ] [-] EMBL CB676920 [ CATTCAGAATTACCTTTTATTCAATTCCAAACAATTTACAACACAATGACAATCACAAGTTACAGTCTTGCTAGCTCTAGCACAAATGTCACTTCACAAGCAAGACAACCTTCCTCTGTTACTCACTGAAAATTTCAGACATAGCACACGATGAATAAAACACACTGGAAATTTCAGATATATCGACTCCAATCACTGCTATCCTACAGACATCATTTTCAGATATGTCGACTCCAATCCCTGCTATCGTACAGACATCTTCTAGCTTAATTGGAATCACGGCTGTGGCAACCCTCCAGCGGGTCCTATCCATTCTGAGACATGCTACAATTGTTGCGCTGCCTGACGAGGCCATGCTGCTGCAGCAGAAGCTGTACCGCGGCGTGCGGGGCAGCCGCAGTGGGGCAAGTGGGTGGCGTAGATCCGGCTGCCGCAGAACCGGGTGCGCGTCTGGCTCGGCACCTACGACTCGGCGACGGAGTAGCGCTCGGCGAGGACGGCGACGGAGCAGCGCTCGGCGGGATGGCGCGGCGCTGCTCTCGGCGAGGACGGCGCCGCTCTAGGTGACGACGGCGACGGGACGGTCCTCCATCCTCGACTGCAAGTCCGGATGACGTGGTGGCAGTGAAC ] [-] EMBL AK121698 [ CATTCAGAATTACCTTTTATTCAATTCCAAACAATTTACAACACAATGACAATCACAAGTTACAGTCTTGCTAGCTCTAGCACAAATGTCACTTCACAAGCAAGACAACCTTCCTCTGTTACTCACTGAAAATTTCAGACATAGCACACGATGAATAAAACACACTGGAAATTTCAGATATATCGACTCCAATCACTGCTATCCTACAGACATCATTTTCAGATATGTCGACTCCAATCCCTGCTATCGTACAGACATCTTCTAGCTTAATTGGAATCACGGCTGTGGCAACCCTCCAGCGGGTCCTATCCATTCTGAGACATGCTACAATTGTTGCGCTGCCTGACGAGGCCATGCTGCTGCAGCAGAAGCTGTACCGCGGCGTGCGGGGCAGCCGCAGTGGGGCAAGTGGGTGGCGTAGATCCGGCTGCCGCAGAACCGGGTGCGCGTCTGGCTCGGCACCTACGACTCGGCGACGGAGTAGCGCTCGGCGAGGACGGCGACGGAGCAGCGCTCGGCGGGATGGCGCGGCGCTGCTCTCGGCGAGGACGGCGCCGCTCTAGGTGACGACGGCGACGGGACGGTCCTCCATCCTCGACTGCAA ] [+] EMBL CB676921 [ TTTATTCCCCTTCAAAGAATTTACAACACAATGACAATCACAAGTTACAGTCTTGCTAGCTCTAGCACAAATGTCACTTCACCAGCAAGACAACCTTCCTCTGTTACTCACTGAAAATTTCAGACATAGCACACGATGAATAAAACACACTGGAAATTTCAGATATATCGACTCCAATCACTGCTATCCTACAGACATCATTTTCAGATATGTCGACTCCAATCCCTGCTATCGTACAGACATCTTCTAGCTTAATTGGAATCACGGCTGTGGCAACCCTCCAGCGGGTCCTATCCATTCTGAGACATGCTACAATTGTTGCGCTGCCTGACGAGGCCATGCTGCTGCAGCAGAAGCTGTACCGCGGCGTGCGGGGCAGCCGCAGTGGGGCAAGTGGGTGGCGTAGATCCGGCTGCCGCAGAACCGGGTGCGCGTCTGGCTCGGCACCTACGACTCGGCGACGGAGTAGCGCTCGGCGAGGACGGCGACGGAGCAGCGCTCGGCGGGATGGCGCGGCGCTGCTCTCGGCGAGGACGGCGCCGCTCTAGGTGACGACGGCGACGGGACGGTCCTCCATCCTCGACTGCAAGTCCGGATGACGTGGTGGCAGTGAACCCTTTCCT] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||