These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10256#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1081 fasta sequence [ACCGCGAACACGGTAAGCCATCTGATCAGTGGCTCGCCGTCGCCGCTGCTCCTCTCCAACTCCAACCTCGCATCACTCCATGCGCGAGCTCGAGCTCAGCTGAGTGGACGATGGAATGAGGCTCGTGGCTGCCAAACCTTGCTGCCTCTTCCGAATCTCAAGCGTCGCCGCCGTTGCAGCCGGTCGCCGCCGGCCATGGCGAGCCGCGGCGGCGAGCGGCAATGCGCACGCCGAAGCCGAAGGCGATGAGGACGGCCAATCGCTGTCGGCGAGGGCGAGGGGCAGGCGGGCGCGGCTGTCGGCGAGGCGGCGGGAGAGGATCGTGGTGGTGGAGGGCGGCGGCGTTGGGGGCATCGGCGAGTTCCTGCGTCAGCCCGCCGGCGT-GGAGTCGCTGCTGAACACGAGGGCGCTGCAGAGCTTCGCGGCGGTGGACGAGGCGCCGGGGGCGAACACGTTCCGGTGCACGCTGCAGAGCATCGGCTTCCTCGGGTTCCAGGTCGCCCCCGTCCTCGACCTCCGCGTCGCCCCGACATGCCACGACTGCACCGTCGAGATGCTCTCCTGCAGGTTTGAGGGTTCAGGCTCAGTTGAGCAGCAGAATGAGCTCTTTTCAGCTTTTATGAGCAACCATATAACTTGGAAAGACGATGGTGAGGAACCATGCTTGGACATTGATGTCAATTTGGAGGTCACTCTGGAGGTTTACACGAAGCCATTCAGCATGCTTCCATTGTCAGCAGTGGAGACACCAGGCAACCTGCTGATGCAAGGCCTCCTGGACAGGCTCGTGCCCTTGCTGGGGGAGCAGCTGCTGAGAGACTACCATTCGTGGGTTCAGCTTCAGCAGCAGCAGCCTGAAATTTCCTCATTAGAAA-CTGCTGAAATCGATGCTTCATAGTCGGATGGCTTCATCGAATTCAGAGATTTTTAGCGAGACGAAAGAATTCTGAGAAAATATGTTGGATGGTTTGGAGAAAAATTGGTTGCCGATGTAACTAAAAATTGCAGTTTGTAATATAGTTCCATTATGACTGCTTCAGTGAAACTCA-GGCATCAAACTGCACAG-CTTAACAAAAAAAAA] [+] EMBL AK067267 [ACCGCGAACACGGTAAGCCATCTGATCAGTGGCTCGCCGTCGCCGCTGCTCCTCTCCAACTCCAACCTCGCATCACTCCATGCGCGAGCTCGAGCTCAGCTGAGTGGACGATGGAATGAGGCTCGTGGCTGCCAAACCTTGCTGCCTCTTCCGAATCTCAAGCGTCGCCGCCGTTGCAGCCGGTCGCCGCCGGCCATGGCGAGCCGCGGCGGCGAGCGGCAATGCGCACGCCGAAGCCGAAGGCGATGAGGACGGCCAATCGCTGTCGGCGAGGGCGAGGGGCAGGCGGGCGCGGCTGTCGGCGAGGCGGCGGGAGAGGATCGTGGTGGTGGAGGGCGGCGGCGTTGGGGGCATCGGCGAGTTCCTGCGTCAGCCCGCCGGCGT GGAGTCGCTGCTGAACACGAGGGCGCTGCAGAGCTTCGCGGCGGTGGACGAGGCGCCGGGGGCGAACACGTTCCGGTGCACGCTGCAGAGCATCGGCTTCCTCGGGTTCCAGGTCGCCCCCGTCCTCGACCTCCGCGTCGCCCCGACATGCCACGACTGCACCGTCGAGATGCTCTCCTGCAGGTTTGAGGGTTCAGGCTCAGTTGAGCAGCAGAATGAGCTCTTTTCAGCTTTTATGAGCAACCATATAACTTGGAAAGACGATGGTGAGGAACCATGCTTGGACATTGATGTCAATTTGGAGGTCACTCTGGAGGTTTACACGAAGCCATTCAGCATGCTTCCATTGTCAGCAGTGGAGACACCAGGCAACCTGCTGATGCAAGGCCTCCTGGGCAGGCTCGTGCCCTTGCTGGGGGAGCAGCTGCTGAGAGACTACCATTCGTGGGTTCAGCTTCAGCAGCAGCAGCCTGAAATTTCCTCATTAGAAA CTGCTGAAATCGATGCTTCATAGTCGGATGGCTTCATCGAATTCAGAGATTTTTAGCGAGACGAAAGAATTCTGAGAAAATATGTTGGATGGTTTGGAGAAAAATTGGTTGCCGATGTAACTAAAAATTGCAGTTTGTAATATAGTTCCATTATGACTGCTTCAGTGAAACTCA GGCATCAAAC ] [+] EMBL AK104809 [ CCGTCGCCGCTGCTCCTCTCCAACTCCAACCTCGCATCACTCCATGCGCGAGCTCGAGCTCAGCTGAGTGGACGATGGAATGAGGCTCGTGGCTGCCAAACCTTGCTGCCTCTTCCGAATCTCAAGCGTCGCCGCCGTTGCAGCCGGTCGCCGCCGGCCATGGCGAGCCGCGGCGGCGAGCGGCAATGCGCACGCCGAAGCCGAAGGCGATGAGGACGGCCAATCGCTGTCGGCGAGGGCGAGGGGCAGGCGGGCGCGGCTGTCGGCGAGGCGGCGGGAGAGGATCGTGGTGGTGGAGGGCGGCGGCGTTGGGGGCATCGGCGAGTTCCTGCGTCAGCCCGCCGGCGT GGAGTCGCTGCTGAACACGAGGGCGCTGCAGAGCTTCGCGGCGGTGGACGAGGCGCCGGGGGCGAACACGTTCCGGTGCACGCTGCAGAGCATCGGCTTCCTCGGGTTCCAGGTCGCCCCCGTCCTCGACCTCCGCGTCGCCCCGACATGCCACGACTGCACCGTCGAGATGCTCTCCTGCAGGTTTGAGGGTTCAGGCTCAGTTGAGCAGCAGAATGAGCTCTTTTCAGCTTTTATGAGCAACCATATAACTTGGAAAGACGATGGTGAGGAACCATGCTTGGACATTGATGTCAATTTGGAGGTCACTCTGGAGGTTTACACGAAGCCATTCAGCATGCTTCCATTGTCAGCAGTGGAGACACCAGGCAACCTGCTGATGCAAGGCCTCCTGGACAGGCTCGTGCCCTTGCTGGGGGAGCAGCTGCTGAGAGACTACCATTCGTGGGTTCAGCTTCAGCAGCAGCAGCCTGAAATTTCCTCATTAGAAA CTGCTGAAATCGATGCTTCATAGTCGGATGGCTTCATCGAATTCAGAGATTTTTAGCGAGACGAAAGAATTCTGAGAAAATATGTTGGATGGTTTGGAGAAAAATTGGTTGCCGATGTAACTAAAAATTGCAGTTTGTAATATAGTTCCATTATGAC ] [+] EMBL CB685322 [ cccttcatAGCTGAGTGGACGATGGAATGAGGCTCGTGGCTGCCAAACCTTGCTGCCTCTTCCGAATCTCAAGCGTCGCCGCCGTTGCAGCCGGTCGCCGCCGGCCATGGCGAGCCGCGGCGGCGAGCGGCAATGCGCACGCCGAAGCCGAAGGCGATGAGGACGGCCAATCGCTGTCGGCGAGGGCGAGGGGCAGGCGGGCGCGGCTGTCGGCGAGGCGGCGGGAGAGGATCGTGGTGGTGGAGGGCGGCGGCGTTGGGGGCATCGGCGAGTTCCTGCGTCAGCCCGCCGGCGT GGAGTCGCTGCTGAACACGAGGGCGCTGCAGAGCTTCGCGGCGGTGGACGAGGCGCCGGGGGCGAACACGTTCCGGTGCACGCTGCAGAGCATCGGCTTCCTCGGGTTCCAGGTCGCCCCCGTCCTCGACCTCCGCGTCGCCCCGACATGCCACGACTGCACCGTCGAGATGCTCTCCTGCAGGTTTGAGGGTTCAGGCTCAGTTGAGCAGCAGAATGAGCTCTTTTCAGCTTTTATGAGCAACCATATAACTTGGAAAGACGATGGTGAGGAACCATGCTTGGACATTGATGTCAATTTGGAGGTCACTCTGGAGGTTTACACGAAGCCATTCAGCATGCTTCCATTGTCAGCAGTGGAGACACCAGGCAACCTGCTGATGCAAGGCCTCCTGGACAGGCTCGTGCCCTTG ] [+] EMBL OSS14484A [ CTCGTGGCTGCCAAACCTTGCTGCCTCTTCCGAATCTCAAGCGTCGCCGCCGTTGCAGCCGGTCGCCGCC GCCATGGCGAGCCGCGGCGGCGAGCGGCAATGCGCACG CGAAGCCGAA NAGTNGAGGAC GNCAATCGCTGTCGGCGAGGGCGAGGGGCAGGCGGGCGCGGCTGTCGGCGAGGCGGC GNAGAGGATCGTG ] [-] EMBL CB685323 [ CCGGCGTGGGAGTCGCTGCTGAACACGAGGGCGCTGCAGAGCTTCGCGGCGGTGGACGAGGCGCCGGGGGCGAACACGTTCCGGTGCACGCTGCAGAGCATCGGCTTCCTCGGGTTCCAGGTCGCCCCCGTCCTCGACCTCCGCGTCGCCCCGACATGCCACGACTGCACCGTCGAGATGCTCTCCTGCAGGTTTGAGGGTTCAGGCTCAGTTGAGCAGCAGAATGAGCTCTTTTCAGCTTTTATGAGCAACCATATATCTTGGAAAGACGATGGTGAGGAACCATGCTTGGACATTGATGTCAATTTGGAGGTCACTTTGGAGGTTTACACGAAGCCATTCAGCATGCTTCCATTGTCAGCAGTGGAGACACCAGGCAACCTGCTGATGCAAGGCCTCCTGGACAGGCTCGTGCCCTTGCTGGGGGAGCAGCTGCTGAGAGACTACCATTCGTGGGTTCAGCTTCAGCAGCAGCAGCCTGAAATTTCCTCATTAGAAA CTGCTGAAATCGATGCTTCATAGTCGGATGGCTTCATCGAATTCAGAGATTTTTAGCGAGACGAAAGAATTCTGAGAAAATATGTTGGATGGTTTGGAGAAAAATTGGTTGCCGATGTAACTAAAAATTGCAGTTTGTAATATAGTTCCATTATGTCTGCAGGAGTGAAACTCA GGCATCAA ] [+] EMBL CF197291 [ CAGCAGAATGAGCTCTTTTCAGCTTTTATGAGCAACCATATAACTTGGAAAGACGATGGTGAGGAACCATGCTTGGACATTGATGTCAATTTGGAGGTCACTCTGGAGGTTTACACGAAGCCATTCAGCATGCTTCCATTGTCAGCAGTGGAGACACCAGGCAACCTGCTGATGCAAGGCCTCCTGGACAGGCTCGTGCCCTTGCTGGGGGAGCAGCTGCTGAGAGACTACCATTCGTGGGTTCAGCTTCAGCAGCAGCAGCCTGAAATTTCCTCATTAGAAA CTGCTGAAATCGATGCTTCATAGTCGGATGGCTTCATCGAATTCAGAGATTTTTAGCGAGACGAAAGAATTCTGAGAAAATATGATGGATGGTTTGGAGAAAAATTGGTTGCCGATGTAACTAAAAATTGCAGTTTGTAATATAGTTCCATTATGACTGCTTCAGTGAAACTCA GGCATCAAACTGCACAG CTTAA ] [+] EMBL BI812145 [ GCTTCAGCAGCAGCAGCCTGAAATTTCCTCATTAGAAACCTGCTGAAATCGATGCTTCATAGTCGGATGGCTTCATCGAATTCAGAGATTTTTAGCGAGACGAAAGAATTCTGAGAAAATATGTTGGATGGTTTGGAGAAAAATTGGTTGCCGATGTAACTAAAAATT CAGTTTGTAATATAGTTCCATTATGACTGCTTCAGTGAAACTCAGGGCATTCAACTGCCCAGCCTTACCAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||