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Oryza sativa
cluster # 10256 cluster # 10256       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10256#0 length = 1081 sequences # 7  

consensusID : consensus_10256#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1081
fasta sequence
                              [ACCGCGAACACGGTAAGCCATCTGATCAGTGGCTCGCCGTCGCCGCTGCTCCTCTCCAACTCCAACCTCGCATCACTCCATGCGCGAGCTCGAGCTCAGCTGAGTGGACGATGGAATGAGGCTCGTGGCTGCCAAACCTTGCTGCCTCTTCCGAATCTCAAGCGTCGCCGCCGTTGCAGCCGGTCGCCGCCGGCCATGGCGAGCCGCGGCGGCGAGCGGCAATGCGCACGCCGAAGCCGAAGGCGATGAGGACGGCCAATCGCTGTCGGCGAGGGCGAGGGGCAGGCGGGCGCGGCTGTCGGCGAGGCGGCGGGAGAGGATCGTGGTGGTGGAGGGCGGCGGCGTTGGGGGCATCGGCGAGTTCCTGCGTCAGCCCGCCGGCGT-GGAGTCGCTGCTGAACACGAGGGCGCTGCAGAGCTTCGCGGCGGTGGACGAGGCGCCGGGGGCGAACACGTTCCGGTGCACGCTGCAGAGCATCGGCTTCCTCGGGTTCCAGGTCGCCCCCGTCCTCGACCTCCGCGTCGCCCCGACATGCCACGACTGCACCGTCGAGATGCTCTCCTGCAGGTTTGAGGGTTCAGGCTCAGTTGAGCAGCAGAATGAGCTCTTTTCAGCTTTTATGAGCAACCATATAACTTGGAAAGACGATGGTGAGGAACCATGCTTGGACATTGATGTCAATTTGGAGGTCACTCTGGAGGTTTACACGAAGCCATTCAGCATGCTTCCATTGTCAGCAGTGGAGACACCAGGCAACCTGCTGATGCAAGGCCTCCTGGACAGGCTCGTGCCCTTGCTGGGGGAGCAGCTGCTGAGAGACTACCATTCGTGGGTTCAGCTTCAGCAGCAGCAGCCTGAAATTTCCTCATTAGAAA-CTGCTGAAATCGATGCTTCATAGTCGGATGGCTTCATCGAATTCAGAGATTTTTAGCGAGACGAAAGAATTCTGAGAAAATATGTTGGATGGTTTGGAGAAAAATTGGTTGCCGATGTAACTAAAAATTGCAGTTTGTAATATAGTTCCATTATGACTGCTTCAGTGAAACTCA-GGCATCAAACTGCACAG-CTTAACAAAAAAAAA]

[+] EMBL AK067267             [ACCGCGAACACGGTAAGCCATCTGATCAGTGGCTCGCCGTCGCCGCTGCTCCTCTCCAACTCCAACCTCGCATCACTCCATGCGCGAGCTCGAGCTCAGCTGAGTGGACGATGGAATGAGGCTCGTGGCTGCCAAACCTTGCTGCCTCTTCCGAATCTCAAGCGTCGCCGCCGTTGCAGCCGGTCGCCGCCGGCCATGGCGAGCCGCGGCGGCGAGCGGCAATGCGCACGCCGAAGCCGAAGGCGATGAGGACGGCCAATCGCTGTCGGCGAGGGCGAGGGGCAGGCGGGCGCGGCTGTCGGCGAGGCGGCGGGAGAGGATCGTGGTGGTGGAGGGCGGCGGCGTTGGGGGCATCGGCGAGTTCCTGCGTCAGCCCGCCGGCGT GGAGTCGCTGCTGAACACGAGGGCGCTGCAGAGCTTCGCGGCGGTGGACGAGGCGCCGGGGGCGAACACGTTCCGGTGCACGCTGCAGAGCATCGGCTTCCTCGGGTTCCAGGTCGCCCCCGTCCTCGACCTCCGCGTCGCCCCGACATGCCACGACTGCACCGTCGAGATGCTCTCCTGCAGGTTTGAGGGTTCAGGCTCAGTTGAGCAGCAGAATGAGCTCTTTTCAGCTTTTATGAGCAACCATATAACTTGGAAAGACGATGGTGAGGAACCATGCTTGGACATTGATGTCAATTTGGAGGTCACTCTGGAGGTTTACACGAAGCCATTCAGCATGCTTCCATTGTCAGCAGTGGAGACACCAGGCAACCTGCTGATGCAAGGCCTCCTGGGCAGGCTCGTGCCCTTGCTGGGGGAGCAGCTGCTGAGAGACTACCATTCGTGGGTTCAGCTTCAGCAGCAGCAGCCTGAAATTTCCTCATTAGAAA CTGCTGAAATCGATGCTTCATAGTCGGATGGCTTCATCGAATTCAGAGATTTTTAGCGAGACGAAAGAATTCTGAGAAAATATGTTGGATGGTTTGGAGAAAAATTGGTTGCCGATGTAACTAAAAATTGCAGTTTGTAATATAGTTCCATTATGACTGCTTCAGTGAAACTCA GGCATCAAAC                       ]
[+] EMBL AK104809             [                                    CCGTCGCCGCTGCTCCTCTCCAACTCCAACCTCGCATCACTCCATGCGCGAGCTCGAGCTCAGCTGAGTGGACGATGGAATGAGGCTCGTGGCTGCCAAACCTTGCTGCCTCTTCCGAATCTCAAGCGTCGCCGCCGTTGCAGCCGGTCGCCGCCGGCCATGGCGAGCCGCGGCGGCGAGCGGCAATGCGCACGCCGAAGCCGAAGGCGATGAGGACGGCCAATCGCTGTCGGCGAGGGCGAGGGGCAGGCGGGCGCGGCTGTCGGCGAGGCGGCGGGAGAGGATCGTGGTGGTGGAGGGCGGCGGCGTTGGGGGCATCGGCGAGTTCCTGCGTCAGCCCGCCGGCGT GGAGTCGCTGCTGAACACGAGGGCGCTGCAGAGCTTCGCGGCGGTGGACGAGGCGCCGGGGGCGAACACGTTCCGGTGCACGCTGCAGAGCATCGGCTTCCTCGGGTTCCAGGTCGCCCCCGTCCTCGACCTCCGCGTCGCCCCGACATGCCACGACTGCACCGTCGAGATGCTCTCCTGCAGGTTTGAGGGTTCAGGCTCAGTTGAGCAGCAGAATGAGCTCTTTTCAGCTTTTATGAGCAACCATATAACTTGGAAAGACGATGGTGAGGAACCATGCTTGGACATTGATGTCAATTTGGAGGTCACTCTGGAGGTTTACACGAAGCCATTCAGCATGCTTCCATTGTCAGCAGTGGAGACACCAGGCAACCTGCTGATGCAAGGCCTCCTGGACAGGCTCGTGCCCTTGCTGGGGGAGCAGCTGCTGAGAGACTACCATTCGTGGGTTCAGCTTCAGCAGCAGCAGCCTGAAATTTCCTCATTAGAAA CTGCTGAAATCGATGCTTCATAGTCGGATGGCTTCATCGAATTCAGAGATTTTTAGCGAGACGAAAGAATTCTGAGAAAATATGTTGGATGGTTTGGAGAAAAATTGGTTGCCGATGTAACTAAAAATTGCAGTTTGTAATATAGTTCCATTATGAC                                                   ]
[+] EMBL CB685322             [                                                                                         cccttcatAGCTGAGTGGACGATGGAATGAGGCTCGTGGCTGCCAAACCTTGCTGCCTCTTCCGAATCTCAAGCGTCGCCGCCGTTGCAGCCGGTCGCCGCCGGCCATGGCGAGCCGCGGCGGCGAGCGGCAATGCGCACGCCGAAGCCGAAGGCGATGAGGACGGCCAATCGCTGTCGGCGAGGGCGAGGGGCAGGCGGGCGCGGCTGTCGGCGAGGCGGCGGGAGAGGATCGTGGTGGTGGAGGGCGGCGGCGTTGGGGGCATCGGCGAGTTCCTGCGTCAGCCCGCCGGCGT GGAGTCGCTGCTGAACACGAGGGCGCTGCAGAGCTTCGCGGCGGTGGACGAGGCGCCGGGGGCGAACACGTTCCGGTGCACGCTGCAGAGCATCGGCTTCCTCGGGTTCCAGGTCGCCCCCGTCCTCGACCTCCGCGTCGCCCCGACATGCCACGACTGCACCGTCGAGATGCTCTCCTGCAGGTTTGAGGGTTCAGGCTCAGTTGAGCAGCAGAATGAGCTCTTTTCAGCTTTTATGAGCAACCATATAACTTGGAAAGACGATGGTGAGGAACCATGCTTGGACATTGATGTCAATTTGGAGGTCACTCTGGAGGTTTACACGAAGCCATTCAGCATGCTTCCATTGTCAGCAGTGGAGACACCAGGCAACCTGCTGATGCAAGGCCTCCTGGACAGGCTCGTGCCCTTG                                                                                                                                                                                                                                                                                                ]
[+] EMBL OSS14484A            [                                                                                                                         CTCGTGGCTGCCAAACCTTGCTGCCTCTTCCGAATCTCAAGCGTCGCCGCCGTTGCAGCCGGTCGCCGCC GCCATGGCGAGCCGCGGCGGCGAGCGGCAATGCGCACG CGAAGCCGAA NAGTNGAGGAC GNCAATCGCTGTCGGCGAGGGCGAGGGGCAGGCGGGCGCGGCTGTCGGCGAGGCGGC GNAGAGGATCGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB685323             [                                                                                                                                                                                                                                                                                                                                                                                         CCGGCGTGGGAGTCGCTGCTGAACACGAGGGCGCTGCAGAGCTTCGCGGCGGTGGACGAGGCGCCGGGGGCGAACACGTTCCGGTGCACGCTGCAGAGCATCGGCTTCCTCGGGTTCCAGGTCGCCCCCGTCCTCGACCTCCGCGTCGCCCCGACATGCCACGACTGCACCGTCGAGATGCTCTCCTGCAGGTTTGAGGGTTCAGGCTCAGTTGAGCAGCAGAATGAGCTCTTTTCAGCTTTTATGAGCAACCATATATCTTGGAAAGACGATGGTGAGGAACCATGCTTGGACATTGATGTCAATTTGGAGGTCACTTTGGAGGTTTACACGAAGCCATTCAGCATGCTTCCATTGTCAGCAGTGGAGACACCAGGCAACCTGCTGATGCAAGGCCTCCTGGACAGGCTCGTGCCCTTGCTGGGGGAGCAGCTGCTGAGAGACTACCATTCGTGGGTTCAGCTTCAGCAGCAGCAGCCTGAAATTTCCTCATTAGAAA CTGCTGAAATCGATGCTTCATAGTCGGATGGCTTCATCGAATTCAGAGATTTTTAGCGAGACGAAAGAATTCTGAGAAAATATGTTGGATGGTTTGGAGAAAAATTGGTTGCCGATGTAACTAAAAATTGCAGTTTGTAATATAGTTCCATTATGTCTGCAGGAGTGAAACTCA GGCATCAA                         ]
[+] EMBL CF197291             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CAGCAGAATGAGCTCTTTTCAGCTTTTATGAGCAACCATATAACTTGGAAAGACGATGGTGAGGAACCATGCTTGGACATTGATGTCAATTTGGAGGTCACTCTGGAGGTTTACACGAAGCCATTCAGCATGCTTCCATTGTCAGCAGTGGAGACACCAGGCAACCTGCTGATGCAAGGCCTCCTGGACAGGCTCGTGCCCTTGCTGGGGGAGCAGCTGCTGAGAGACTACCATTCGTGGGTTCAGCTTCAGCAGCAGCAGCCTGAAATTTCCTCATTAGAAA CTGCTGAAATCGATGCTTCATAGTCGGATGGCTTCATCGAATTCAGAGATTTTTAGCGAGACGAAAGAATTCTGAGAAAATATGATGGATGGTTTGGAGAAAAATTGGTTGCCGATGTAACTAAAAATTGCAGTTTGTAATATAGTTCCATTATGACTGCTTCAGTGAAACTCA GGCATCAAACTGCACAG CTTAA          ]
[+] EMBL BI812145             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCTTCAGCAGCAGCAGCCTGAAATTTCCTCATTAGAAACCTGCTGAAATCGATGCTTCATAGTCGGATGGCTTCATCGAATTCAGAGATTTTTAGCGAGACGAAAGAATTCTGAGAAAATATGTTGGATGGTTTGGAGAAAAATTGGTTGCCGATGTAACTAAAAATT CAGTTTGTAATATAGTTCCATTATGACTGCTTCAGTGAAACTCAGGGCATTCAACTGCCCAGCCTTACCAAAAAAAAA]


>consensus_10256#0 ACCGCGAACACGGTAAGCCATCTGATCAGTGGCTCGCCGTCGCCGCTGCTCCTCTCCAAC TCCAACCTCGCATCACTCCATGCGCGAGCTCGAGCTCAGCTGAGTGGACGATGGAATGAG GCTCGTGGCTGCCAAACCTTGCTGCCTCTTCCGAATCTCAAGCGTCGCCGCCGTTGCAGC CGGTCGCCGCCGGCCATGGCGAGCCGCGGCGGCGAGCGGCAATGCGCACGCCGAAGCCGA AGGCGATGAGGACGGCCAATCGCTGTCGGCGAGGGCGAGGGGCAGGCGGGCGCGGCTGTC GGCGAGGCGGCGGGAGAGGATCGTGGTGGTGGAGGGCGGCGGCGTTGGGGGCATCGGCGA GTTCCTGCGTCAGCCCGCCGGCGTGGAGTCGCTGCTGAACACGAGGGCGCTGCAGAGCTT CGCGGCGGTGGACGAGGCGCCGGGGGCGAACACGTTCCGGTGCACGCTGCAGAGCATCGG CTTCCTCGGGTTCCAGGTCGCCCCCGTCCTCGACCTCCGCGTCGCCCCGACATGCCACGA CTGCACCGTCGAGATGCTCTCCTGCAGGTTTGAGGGTTCAGGCTCAGTTGAGCAGCAGAA TGAGCTCTTTTCAGCTTTTATGAGCAACCATATAACTTGGAAAGACGATGGTGAGGAACC ATGCTTGGACATTGATGTCAATTTGGAGGTCACTCTGGAGGTTTACACGAAGCCATTCAG CATGCTTCCATTGTCAGCAGTGGAGACACCAGGCAACCTGCTGATGCAAGGCCTCCTGGA CAGGCTCGTGCCCTTGCTGGGGGAGCAGCTGCTGAGAGACTACCATTCGTGGGTTCAGCT TCAGCAGCAGCAGCCTGAAATTTCCTCATTAGAAACTGCTGAAATCGATGCTTCATAGTC GGATGGCTTCATCGAATTCAGAGATTTTTAGCGAGACGAAAGAATTCTGAGAAAATATGT TGGATGGTTTGGAGAAAAATTGGTTGCCGATGTAACTAAAAATTGCAGTTTGTAATATAG TTCCATTATGACTGCTTCAGTGAAACTCAGGCATCAAACTGCACAGCTTAACAAAAAAAA A



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)