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Oryza sativa
cluster # 10277 cluster # 10277       Sequences # 7       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10277#0 length = 2389 sequences # 6  
consensus_10277#1 length = 238 sequences # 1  

consensusID : consensus_10277#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2389
fasta sequence
                              [TCCGCTCCTCCTCTCCCTGCCCTGCGCTGCGCGGGGCGTGGTCGAGGCTCGACATGGTGCTGTGGGAGCTGACGGCGATCACGGCCTACTTCCTGGGGCTCAGGCGGACCTACCGCCTCGCGCTCCGCATCCAGCGCCGCCTCATCGGCCCCAACCACCCCAGGATCCGCCACTTCGTCTACAGGTCCCTCTCCTCTCCTTCCCCTCCCCACGCCCCGCGCGCGCTCTGATCCGAGCAATCGGTACGGATTCGCGGCGCGGGGACGCCCAAATCGATACGGATTCGTCCTTGATTTCATCTTTGTTGGGGGAAAATCACTGGGGCGAATCGCGTGTACTACAGTACCATGCCACTGGGTAGAAATTGCGGGCGCGCCTTCCCTGAAATCTGTGATAAACCTGTCGTATTGTGATGTTGACCAGCTTCAGTTAGCTCAGAAATGTCGCTGGCACAATACGGGGCGCTAGGTTGGGACATTGCCAGCATTTCGTTTGGGTTGTCCAAACCACAGCTTTGCTGCTACATCCTCACAGCTGCAATTCGATTTGTCATGTTCATTCCGATGTGACCGTGTCAACCTTGAAACTTACTTGCACTATACCCGGTGTTATACACAAGTCCCGTAATGAAATCTTGTCAAATGCTCCTATTTTTGTGATAGATTGCTCAACATGGAAATATCCCTCAATCCTCATATATTCATTTTCCTTTACTTTGCAATAAAAGAGATTATACCTGAATCTCACACTCCATTTATGCCTTCCATCCGCACTTTGGTTTGTACTCATTTGAGATACAGATACCTGTAATACTAATACGTTACCTTATATTACTAACTATGCCTCCGCTTTTGCCTAATGTTACTGAACCATGTAGGCGTATTGTCCAAATAAAAGTTCTTGTTATGTCTCTCGAAAAGGAGTATAGTATTGTAGTTTTTTGGTGTATTATATAACCTGGAAGTTCCATAGCTTGATGATCCAGTGTTTCTAGCATGAAATTGAATTTTTGATATGCTGACATTTTTAAAATGTACACATTGTACTTTATGCTTTCCGGCTTGTCCATTGTTGTTCAGCTGGACTTGAGCAAAGTAACTGTGATGATGGATCTGCATATTGCGTACACAATCCTGACTCCCCATCCATGTAATTTTTCTGGCTAATTTTTTGGTTTTATGCCATACCTCACACGCTGATGGTTTCAACCTTGTCCATATGTGGATCTAACAATAATCCTGTCCAGTCTACTAAATCTGTCCAATTGCCTTTGTAAAAACTAAGGATTGAAATGATTCAGATAAGCAGTTCCTTAAATGGAGTTTCATCTTCAGTTCTTTTGTTGATCCCTGAATAGTTCTAGCTAATTAATTACTATAGTACACAATATTACATAGTCATTTCAATTGATTTTACGTGACCAAACAATTCTTCTCTGCAGGCGAACACGGGATGTTTTCAATGTTGCGGTTTCAGTGCACAAGAACATTCAGCAGAGAGACCTAGAAGTTGGTCGGAACCTTGGTAACATGATCCTTCGCTGGCTTGACCGCATGAAGCCCTCAGCACAGATTCGTCCCCATCCTCCAGGCCCACCAAATGGCAGCTCAGAGCAATTCAGGCATCTTTCGAGTACAAGCAAGAGCACAGGAGCTCAGAAGCCTACATCCAAAACTTTACCGTGCGATGGTGGAAAGGTGTTGTTTTCACCTCTGAACATTCGACCCAAGTCCTTCCCTGTTCTACCGACAATGATGCAGCCCACCAGAATTAGTGCTAGCAG-CCAGTGTAGGCGGATTTCCTACTCATCATTCCCATCGGCCACCGCTAAGAGGAATGATTT-CATGCAGGG-TGTGTTCCGCAAGGACA-TTGCACAGCTCATGGTGTGATGATCTGTACTGTCCTGG-AATTCAAA-GTTCAATTGACTTAGTTTCGCGTAGAACA-GAAGTCTCATGACTCATGGGT-GATGGATCCTGCAATAAT-AAAGGGCTGAACAAG-TTTTTTGTTGCTCAACCAGTTTAGCAAATAGATTTTCTAACCAATGATCATAAG-ACAGTATGTGGTATTCCATAATGGATATGTTTACTCCATTCGTCCTTGAAATGCGCAAAAGGAACTATGTAGGATTGAAACATTATCTCAGATTCTCACTACTTCCTCTTCACTTCTCTTTTTTTAATTGTCAGATTTCCATTTCAGAAATGGCACTACTTTAGAGATATCTCCTTTCTCCAAACTGGGAGATTTCTTTTTCCTAGGAGGAATTCACCTTTAATTTTACTGTTGTATGACCCACATATGGAAATGGTTGAATCTGTTGCTGTTGCAGACCACAATTCCTGGAATTTTTTTTGGGAAGATAAAATATTTACTTGTTTCTCCACAAAAA]

[+] EMBL AK102783             [TCCGCTCCTCCTCTCCCTGCCCTGCGCTGCGCGGGGCGTGGTCGAGGCTCGACATGGTGCTGTGGGAGCTGACGGCGATCACGGCCTACTTCCTGGGGCTCAGGCGGACCTACCGCCTCGCGCTCCGCATCCAGCGCCGCCTCATCGGCCCCAACCACCCCAGGATCCGCCACTTCGTCTACAGGTCCCTCTCCTCTCCTTCCCCTCCCCACGCCCCGCGCGCGCTCTGATCCGAGCAATCGGTACGGATTCGCGGCGCGGGGACGCCCAAATCGATACGGATTCGTCCTTGATTTCATCTTTGTTGGGGGAAAATCACTGGGGCGAATCGCGTGTACTACAGTACCATGCCACTGGGTAGAAATTGCGGGCGCGCCTTCCCTGAAATCTGTGATAAACCTGTCGTATTGTGATGTTGACCAGCTTCAGTTAGCTCAGAAATGTCGCTGGCACAATACGGGGCGCTAGGTTGGGACATTGCCAGCATTTCGTTTGGGTTGTCCAAACCACAGCTTTGCTGCTACATCCTCACAGCTGCAATTCGATTTGTCATGTTCATTCCGATGTGACCGTGTCAACCTTGAAACTTACTTGCACTATACCCGGTGTTATACACAAGTCCCGTAATGAAATCTTGTCAAATGCTCCTATTTTTGTGATAGATTGCTCAACATGGAAATATCCCTCAATCCTCATATATTCATTTTCCTTTACTTTGCAATAAAAGAGATTATACCTGAATCTCACACTCCATTTATGCCTTCCATCCGCACTTTGGTTTGTACTCATTTGAGATACAGATACCTGTAATACTAATACGTTACCTTATATTACTAACTATGCCTCCGCTTTTGCCTAATGTTACTGAACCATGTAGGCGTATTGTCCAAATAAAAGTTCTTGTTATGTCTCTCGAAAAGGAGTATAGTATTGTAGTTTTTTGGTGTATTATATAACCTGGAAGTTCCATAGCTTGATGATCCAGTGTTTCTAGCATGAAATTGAATTTTTGATATGCTGACATTTTTAAAATGTACACATTGTACTTTATGCTTTCCGGCTTGTCCATTGTTGTTCAGCTGGACTTGAGCAAAGTAACTGTGATGATGGATCTGCATATTGCGTACACAATCCTGACTCCCCATCCATGTAATTTTTCTGGCTAATTTTTTGGTTTTATGCCATACCTCACACGCTGATGGTTTCAACCTTGTCCATATGTGGATCTAACAATAATCCTGTCCAGTCTACTAAATCTGTCCAATTGCCTTTGTAAAAACTAAGGATTGAAATGATTCAGATAAGCAGTTCCTTAAATGGAGTTTCATCTTCAGTTCTTTTGTTGATCCCTGAATAGTTCTAGCTAATTAATTACTATAGTACACAATATTACATAGTCATTTCAATTGATTTTACGTGACCAAACAATTCTTCTCTGCAGGCGAACACGGGATGTTTTCAATGTTGCGGTTTCAGTGCACAAGAACATTCAGCAGAGAGACCTAGAAGTTGGTCGGAACCTTGGTAACATGATCCTTCGCTGGCTTGACCGCATGAAGCCCTCAGCACAGATTCGTCCCCATCCTCCAGGCCCACCAAATGGCAGCTCAGAGCAATTCAGGCATCTTTCGAGTACAAGCAAGAGCACAGGAGCTCAGAAGCCTACATCCAAAACTTTACCGTGCGATGGTGGAAAGGTGTTGTTTTCACCTCTGAACATTCGACCCAAGTCCTTCCCTGTTCTACCGACAATGATGCAGCCCACCAGAATTAGTGCTAGCAG CCAGTGTAGGCGGATTTCCTACTCATCATTCCCATCGGCCACCGCTAAGAGGAATGATTT CATGCAGGG TGTGTTCCGCAAGGACA TTGCACAGCTCATGGTGTGATGATCTGTACTGTCCTGG AATTCAAA GTTCAATTGACTTAGTTTCGCGTAGAACA GAAGTCTCATGACTCATGGGT GATGGATCCTGCAATAAT AAAGGGCTGAACAAG TTTTTTGTTGCTCAACCAGTTTAGCAAATAGATTTTCTAACCAATGATCATAAG ACAGTATGTGGTATTCCATAATGGATATGTTTACTCCATTCGTCCTTGAAATGCGCAAAAGGAACTATGTAGGATTGAAACATTATCTCAGATTCTCACTACTTCCTCTTCACTTCTCTTTTTTTAATTGTCAGATTTCCATTTCAGAAATGGCACTACTTTAGAGATATCTCCTTTCTCCAAACTGGGAGATTTCTTTTTCCTAGGAGGAATTCACCTTTAATTTTACTGTTGTATGACCCACATATGGAAATGGTTGAATCTGTTGCTGT                                                                 ]
[+] EMBL CA765170             [                                                                                                                                                                                                                           GCGCGCTCTGATCCGAGCAATCGGTACGGATTCGCGGCGCGGGGACGCCCAAATCGATACGGATTCGTCCTTGATTT ATCTTTGTTGGGGGAAAATCACTGGGGCGAATCGCGTGTACTACAGTACCATGCCACTGGGTAGAAATTGCGGGCGCGCCTTCCCTGAAATCTGTGATAAACCTGTCGTATTGTGATGTTGACCAGCTTCAGTTAGCTCAGAAATGTCGCTGGCACAATACGGGGCGCTAGGTTGGGACATTGCCAGCATTTCGTTTGGGTTGTCCAAACCACAGCTTTGCTGCTACATCCTCACAGCTGCAATTCGATTTGTCATGTTCATTCCGATGTGACCGTGTCAACCATGAAACTTACTTGCACTATACCCGGTGTTATACACAAGTCCCGTAATGAAATCTTGTCAAATGCTCCTATTTTTGTGATAGATTGCTCAACATGGAAATATCCCTCAATCCTCATATATTCATTTTCCTTTACTTTGCAATAAAAGAGATTATACCTGAATCTCACACTCCATTTATGCCTTCCATCCGCACTTTGGTTTGTACTCATTTGAGATACAGATACCTGTAATACTAATACGTTACCTTATATTACTAACTATGCCTCCGCTTTTGCCTAATGTTACTGAACCATGTAGGCGTATTGTCCAAATAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL C96788               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATGTTTTCAATGTTGCGGTTTCAGTGCACAAGAACATTCAGCAGAGAGACCTAGAAGTTGGTCGGAACCTTGGTAACATGATCCTTCGCTGGCTTGACCGCATGAAGCCCTCAGCACAGATTCGTCCCCATCCTCCAGGCCCACCAAATGGCAGCTCAGAGCAATTCAGGCATCTTTCGAGTACAAGCAAGAGCACAGGAGCTCAGAAGCCTACATCCAAAACTTTACCGTGCGATGGTGGAAAGGTGTTGTTTTCACCTCTGAACATTCGACCCAAGTCCTTCCCTGTTCTACCGACAATGATGCAGCCCACCAGAATTAGTGCTAGCAG CCAGTGTAGGCGGATTTCCTACTCATCATTCCCATCGGCCACCGCTAAGAGGAATGATTT CATGCAGGG TGTGTTCCGCAAGGACA TTGCACAGCTCATGGTGTGATGATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BI796975             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     acCCCTCAGCACAGATTCGTCCCCATCCTCCAGGCCCACCAAAT GCAGCTCAGACCAATTCAGCCATCTTTCGAGTACAAGCAAGAGCACAGGAGCTCAGAA CCTACATCC AAACTTTACCGTGCGATGGTGGAAAGGTGTTGTTTTCACCTCTGAACATTCGACCCAAGTCCTTCCCTGTTCTACCGACAATGATGCAGCCCACCAGAATTAGTGCTA CAG CCAGTGTAGGCGGATTTCCTACTCATCATTCCCATCGGCCACCGCTAAGAGGAATGATTT AATGCAGGG TGTGTTCCGCAAGGACA TTGCACAGCTCATGGTGTGATGATCTATACTGTCCTGG AATTCAAA GTTCAATTGACTTAGTTTCGCGTAGAACA GAAGTCTCATGACTCATGGGT GATGGATCCTCCAATAAT AAAGGGCTGAACAAG TTTTTTGTTGCTCAACCAGTTTA CCAATAGATTTTCTAACC ATGATCATAAGCAC GTATGTGGTATTCCATAATGGATATGTTTACTCCAaaaaa                                                                                                                                                                                                                                                                                                      ]
[+] EMBL OSC27671             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGCAATTCAGGCATCTTTCGAGTACAAGCAAGAGCACAGGAGCTCAGAAGCCTACATCCAAAACTTTACCGTGCGATGGTGGAAAGGTGTTGTTTTCACCTCTGAACATTCGACCCAAGTNCTTCCCTGTTCTACCGACAATGATGCAGCCCACCAGAATTAGTGCTAGCAG CCAGTGTAGGCGGATTTCCTACTCATCATTCCCATCGGCCACCGNTAAGAGGAATGATTT CATGCAGGGTTGTGTTCCGCAAGNACANTTGNACANCTCATGGTGTGATGATCTGTACTGTNCTGGNATTTNAAATGTTCAATTGACTTAGTTTCGCGTAGAACACGAAGTCTCATGACTCATGGGTGGNTGGATCCTGNANTAATNAATGGGCTGNACAAGTTTTTTTGTTGCT                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL C96789               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGGTGTTG TTTCACCTCTGACCATTCGACCCAGNCCCTTCCCTGTTCTACC NCAATGATGCAGCCCCCCAGAATTAGTGCTAGCAGCCCAGTGTAGGCGGATTCCCTACTCATCA TCCCATCGGCCACCGCTAAGAGGAATGATTTCCATGCAGGG TGTGTTCCGCAAGGACA TTGCACAGCTCATGGTGTGATGATCTGTACTGTCCTGG AATTCAAA GTTCAATTGACTTAGTTTCGCGTAGAACA GAAGTCTCATGACTCATGGGT GATGGATCCTGCAATAAT AAAGGGCTGAACAAG TTTTTTGTTGCTCAACCAGTTTAGCAAATAGATTTTCTAACCAATGATCATAAG ACAGTATGTGGTATTCCATAATGGATATGTTTACTCCATTCGTCCTTGAAATGCGCAAAAGGAACTATGTAGGATTGAAACATTATCTCAGATTCTCACTACTTCCTCTTCACTTCTCTTTTTTTAATTGTCAGATTTCCATTTCAGAAATGGCACTACTTTAGAGATATCTCCTTTCTCCAAACTGGGAGATTTCTTTTTCCTAGGAGGAATTCACCTTTAATTTTACTGTTGTATGACCCACATATGGAAATGGTTGAATCTGTTGCTGTTGCAGACCACAATTCCTGGAATTTTTTTTGGGAAGATAAAATATTTACTTGTTTCTCCACAAAAA]


>consensus_10277#0 TCCGCTCCTCCTCTCCCTGCCCTGCGCTGCGCGGGGCGTGGTCGAGGCTCGACATGGTGC TGTGGGAGCTGACGGCGATCACGGCCTACTTCCTGGGGCTCAGGCGGACCTACCGCCTCG CGCTCCGCATCCAGCGCCGCCTCATCGGCCCCAACCACCCCAGGATCCGCCACTTCGTCT ACAGGTCCCTCTCCTCTCCTTCCCCTCCCCACGCCCCGCGCGCGCTCTGATCCGAGCAAT CGGTACGGATTCGCGGCGCGGGGACGCCCAAATCGATACGGATTCGTCCTTGATTTCATC TTTGTTGGGGGAAAATCACTGGGGCGAATCGCGTGTACTACAGTACCATGCCACTGGGTA GAAATTGCGGGCGCGCCTTCCCTGAAATCTGTGATAAACCTGTCGTATTGTGATGTTGAC CAGCTTCAGTTAGCTCAGAAATGTCGCTGGCACAATACGGGGCGCTAGGTTGGGACATTG CCAGCATTTCGTTTGGGTTGTCCAAACCACAGCTTTGCTGCTACATCCTCACAGCTGCAA TTCGATTTGTCATGTTCATTCCGATGTGACCGTGTCAACCTTGAAACTTACTTGCACTAT ACCCGGTGTTATACACAAGTCCCGTAATGAAATCTTGTCAAATGCTCCTATTTTTGTGAT AGATTGCTCAACATGGAAATATCCCTCAATCCTCATATATTCATTTTCCTTTACTTTGCA ATAAAAGAGATTATACCTGAATCTCACACTCCATTTATGCCTTCCATCCGCACTTTGGTT TGTACTCATTTGAGATACAGATACCTGTAATACTAATACGTTACCTTATATTACTAACTA TGCCTCCGCTTTTGCCTAATGTTACTGAACCATGTAGGCGTATTGTCCAAATAAAAGTTC TTGTTATGTCTCTCGAAAAGGAGTATAGTATTGTAGTTTTTTGGTGTATTATATAACCTG GAAGTTCCATAGCTTGATGATCCAGTGTTTCTAGCATGAAATTGAATTTTTGATATGCTG ACATTTTTAAAATGTACACATTGTACTTTATGCTTTCCGGCTTGTCCATTGTTGTTCAGC TGGACTTGAGCAAAGTAACTGTGATGATGGATCTGCATATTGCGTACACAATCCTGACTC CCCATCCATGTAATTTTTCTGGCTAATTTTTTGGTTTTATGCCATACCTCACACGCTGAT GGTTTCAACCTTGTCCATATGTGGATCTAACAATAATCCTGTCCAGTCTACTAAATCTGT CCAATTGCCTTTGTAAAAACTAAGGATTGAAATGATTCAGATAAGCAGTTCCTTAAATGG AGTTTCATCTTCAGTTCTTTTGTTGATCCCTGAATAGTTCTAGCTAATTAATTACTATAG TACACAATATTACATAGTCATTTCAATTGATTTTACGTGACCAAACAATTCTTCTCTGCA GGCGAACACGGGATGTTTTCAATGTTGCGGTTTCAGTGCACAAGAACATTCAGCAGAGAG ACCTAGAAGTTGGTCGGAACCTTGGTAACATGATCCTTCGCTGGCTTGACCGCATGAAGC CCTCAGCACAGATTCGTCCCCATCCTCCAGGCCCACCAAATGGCAGCTCAGAGCAATTCA GGCATCTTTCGAGTACAAGCAAGAGCACAGGAGCTCAGAAGCCTACATCCAAAACTTTAC CGTGCGATGGTGGAAAGGTGTTGTTTTCACCTCTGAACATTCGACCCAAGTCCTTCCCTG TTCTACCGACAATGATGCAGCCCACCAGAATTAGTGCTAGCAGCCAGTGTAGGCGGATTT CCTACTCATCATTCCCATCGGCCACCGCTAAGAGGAATGATTTCATGCAGGGTGTGTTCC GCAAGGACATTGCACAGCTCATGGTGTGATGATCTGTACTGTCCTGGAATTCAAAGTTCA ATTGACTTAGTTTCGCGTAGAACAGAAGTCTCATGACTCATGGGTGATGGATCCTGCAAT AATAAAGGGCTGAACAAGTTTTTTGTTGCTCAACCAGTTTAGCAAATAGATTTTCTAACC AATGATCATAAGACAGTATGTGGTATTCCATAATGGATATGTTTACTCCATTCGTCCTTG AAATGCGCAAAAGGAACTATGTAGGATTGAAACATTATCTCAGATTCTCACTACTTCCTC TTCACTTCTCTTTTTTTAATTGTCAGATTTCCATTTCAGAAATGGCACTACTTTAGAGAT ATCTCCTTTCTCCAAACTGGGAGATTTCTTTTTCCTAGGAGGAATTCACCTTTAATTTTA CTGTTGTATGACCCACATATGGAAATGGTTGAATCTGTTGCTGTTGCAGACCACAATTCC TGGAATTTTTTTTGGGAAGATAAAATATTTACTTGTTTCTCCACAAAAA



consensusID : consensus_10277#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 238
fasta sequence
                              [CTCGCCGCCACCGCCACCGNCTCCGCCGNCGNGGCGANTCCGCTCCTCCTCTCCCTGCCCTGCGCTGCGCGGGGCGTGGTCGAGGCTCGANATGGTGCTGTGGGAGCTGACGGNGATCACGGNCTACTTCCTGGGGCTCAGGCGGACCTACCGCCTNGNGCTCCGCATCCAGCGTCGTCTCATCGGCCCCAACCACCCCAGGATCCGTCANTTNGTCTACAGGCGAACACGGGATNTT]

[+] EMBL AU068796             [CTCGCCGCCACCGCCACCGNCTCCGCCGNCGNGGCGANTCCGCTCCTCCTCTCCCTGCCCTGCGCTGCGCGGGGCGTGGTCGAGGCTCGANATGGTGCTGTGGGAGCTGACGGNGATCACGGNCTACTTCCTGGGGCTCAGGCGGACCTACCGCCTNGNGCTCCGCATCCAGCGTCGTCTCATCGGCCCCAACCACCCCAGGATCCGTCANTTNGTCTACAGGCGAACACGGGATNTT]


>consensus_10277#1 CTCGCCGCCACCGCCACCGNCTCCGCCGNCGNGGCGANTCCGCTCCTCCTCTCCCTGCCC TGCGCTGCGCGGGGCGTGGTCGAGGCTCGANATGGTGCTGTGGGAGCTGACGGNGATCAC GGNCTACTTCCTGGGGCTCAGGCGGACCTACCGCCTNGNGCTCCGCATCCAGCGTCGTCT CATCGGCCCCAACCACCCCAGGATCCGTCANTTNGTCTACAGGCGAACACGGGATNTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10277#0      --------------------------------------TCCGCTCCTCCTCTCCCTGCCC 22
consensus_10277#1      CTCGCCGCCACCGCCACCGNCTCCGCCGNCGNGGCGANTCCGCTCCTCCTCTCCCTGCCC 60
                                                             **********************

consensus_10277#0      TGCGCTGCGCGGGGCGTGGTCGAGGCTCGACATGGTGCTGTGGGAGCTGACGGCGATCAC 82
consensus_10277#1      TGCGCTGCGCGGGGCGTGGTCGAGGCTCGANATGGTGCTGTGGGAGCTGACGGNGATCAC 120
                       ****************************** ********************** ******

consensus_10277#0      GGCCTACTTCCTGGGGCTCAGGCGGACCTACCGCCTCGCGCTCCGCATCCAGCGCCGCCT 142
consensus_10277#1      GGNCTACTTCCTGGGGCTCAGGCGGACCTACCGCCTNGNGCTCCGCATCCAGCGTCGTCT 180
                       ** ********************************* * *************** ** **

consensus_10277#0      CATCGGCCCCAACCACCCCAGGATCCGCCACTTCGTCTACAGGTCCCTCTCCTCTCCTTC 202
consensus_10277#1      CATCGGCCCCAACCACCCCAGGATCCGTCANTTNGTCTACAGGCGAACACGGGATNTT-- 238
                       *************************** ** ** *********           *  *  

consensus_10277#0      CCCTCCCCACGCCCCGCGCGCGCTCTGATCCGAGCAATCGGTACGGATTCGCGGCGCGGG 262
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      GACGCCCAAATCGATACGGATTCGTCCTTGATTTCATCTTTGTTGGGGGAAAATCACTGG 322
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      GGCGAATCGCGTGTACTACAGTACCATGCCACTGGGTAGAAATTGCGGGCGCGCCTTCCC 382
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      TGAAATCTGTGATAAACCTGTCGTATTGTGATGTTGACCAGCTTCAGTTAGCTCAGAAAT 442
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      GTCGCTGGCACAATACGGGGCGCTAGGTTGGGACATTGCCAGCATTTCGTTTGGGTTGTC 502
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      CAAACCACAGCTTTGCTGCTACATCCTCACAGCTGCAATTCGATTTGTCATGTTCATTCC 562
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      GATGTGACCGTGTCAACCTTGAAACTTACTTGCACTATACCCGGTGTTATACACAAGTCC 622
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      CGTAATGAAATCTTGTCAAATGCTCCTATTTTTGTGATAGATTGCTCAACATGGAAATAT 682
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      CCCTCAATCCTCATATATTCATTTTCCTTTACTTTGCAATAAAAGAGATTATACCTGAAT 742
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      CTCACACTCCATTTATGCCTTCCATCCGCACTTTGGTTTGTACTCATTTGAGATACAGAT 802
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      ACCTGTAATACTAATACGTTACCTTATATTACTAACTATGCCTCCGCTTTTGCCTAATGT 862
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      TACTGAACCATGTAGGCGTATTGTCCAAATAAAAGTTCTTGTTATGTCTCTCGAAAAGGA 922
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      GTATAGTATTGTAGTTTTTTGGTGTATTATATAACCTGGAAGTTCCATAGCTTGATGATC 982
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      CAGTGTTTCTAGCATGAAATTGAATTTTTGATATGCTGACATTTTTAAAATGTACACATT 1042
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      GTACTTTATGCTTTCCGGCTTGTCCATTGTTGTTCAGCTGGACTTGAGCAAAGTAACTGT 1102
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      GATGATGGATCTGCATATTGCGTACACAATCCTGACTCCCCATCCATGTAATTTTTCTGG 1162
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      CTAATTTTTTGGTTTTATGCCATACCTCACACGCTGATGGTTTCAACCTTGTCCATATGT 1222
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      GGATCTAACAATAATCCTGTCCAGTCTACTAAATCTGTCCAATTGCCTTTGTAAAAACTA 1282
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      AGGATTGAAATGATTCAGATAAGCAGTTCCTTAAATGGAGTTTCATCTTCAGTTCTTTTG 1342
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      TTGATCCCTGAATAGTTCTAGCTAATTAATTACTATAGTACACAATATTACATAGTCATT 1402
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      TCAATTGATTTTACGTGACCAAACAATTCTTCTCTGCAGGCGAACACGGGATGTTTTCAA 1462
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      TGTTGCGGTTTCAGTGCACAAGAACATTCAGCAGAGAGACCTAGAAGTTGGTCGGAACCT 1522
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      TGGTAACATGATCCTTCGCTGGCTTGACCGCATGAAGCCCTCAGCACAGATTCGTCCCCA 1582
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      TCCTCCAGGCCCACCAAATGGCAGCTCAGAGCAATTCAGGCATCTTTCGAGTACAAGCAA 1642
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      GAGCACAGGAGCTCAGAAGCCTACATCCAAAACTTTACCGTGCGATGGTGGAAAGGTGTT 1702
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      GTTTTCACCTCTGAACATTCGACCCAAGTCCTTCCCTGTTCTACCGACAATGATGCAGCC 1762
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      CACCAGAATTAGTGCTAGCAGCCAGTGTAGGCGGATTTCCTACTCATCATTCCCATCGGC 1822
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      CACCGCTAAGAGGAATGATTTCATGCAGGGTGTGTTCCGCAAGGACATTGCACAGCTCAT 1882
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      GGTGTGATGATCTGTACTGTCCTGGAATTCAAAGTTCAATTGACTTAGTTTCGCGTAGAA 1942
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      CAGAAGTCTCATGACTCATGGGTGATGGATCCTGCAATAATAAAGGGCTGAACAAGTTTT 2002
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      TTGTTGCTCAACCAGTTTAGCAAATAGATTTTCTAACCAATGATCATAAGACAGTATGTG 2062
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      GTATTCCATAATGGATATGTTTACTCCATTCGTCCTTGAAATGCGCAAAAGGAACTATGT 2122
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      AGGATTGAAACATTATCTCAGATTCTCACTACTTCCTCTTCACTTCTCTTTTTTTAATTG 2182
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      TCAGATTTCCATTTCAGAAATGGCACTACTTTAGAGATATCTCCTTTCTCCAAACTGGGA 2242
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      GATTTCTTTTTCCTAGGAGGAATTCACCTTTAATTTTACTGTTGTATGACCCACATATGG 2302
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      AAATGGTTGAATCTGTTGCTGTTGCAGACCACAATTCCTGGAATTTTTTTTGGGAAGATA 2362
consensus_10277#1      ------------------------------------------------------------
                                                                                   

consensus_10277#0      AAATATTTACTTGTTTCTCCACAAAAA 2389
consensus_10277#1      ---------------------------
                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)