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Oryza sativa
cluster # 10291 cluster # 10291       Sequences # 7       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10291#0 length = 2339 sequences # 6  
consensus_10291#1 length = 249 sequences # 1  

consensusID : consensus_10291#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2339
fasta sequence
                              [CTGCTGCCACTGCACTACATTACGACGGGACGTTGACATTGGCGATGGCACCTCCCCTCCTCCTCCCCCTCCACGCGGCAGAGTCCTCCTGACCCACACGGCCGCGCCGCGCGCGCTGCGCCTGCTGAGGCGGGAGGGAGCGGGCCCGCCCGCGATGGCGGCGGAGGCCGCGGCGGAGATCGTGCGGGAGATCGCGGCGGTGGGCGCCGCCGATTTGGCTGCGGCCGCCGAGCCGCTGCGCGCGG-ACTGCCTCCGCCTCGCTCGGAAGGTCTCGCTGCTGTCGCACCTCGTCGCGGAGGTCGCCGAGGCGGGGGCCGGGGGTGGGGACGCGGACGCGGCGGATTCGTGGTTGGGGGATCTGGTCAGGGCGCTGCAGGCCGCCAGGAGGTTCGTCGAGCTCGGGCGCGCGCCGGCGCGACCGTCGAGGGCGTCGGATCAGGATGCCGTCTGCAACAATGTTGCTGTTCAGTTCAAGTTTGTGACTTGGCAGTTGCAAACAGTTCTAGCAAGACTTCCACAGAGCTGTTTTCAAATATCAGATGAAGTTCAAGAAGAGGTTGATTTAGTGCGAGCTCAGCTTCGAAGAGAAATGGAGAAGAAAGGAGACATTGATGTAAACATTTTTTCAAAATTCCATGATATCTTAGCTCTTCATGTTAGTACTGTTGGATCGCAGTCTGAGCAATCACATGGCCAGCCAGACACACCACAGATGGAAAACTTATGCAACGGTCATCTGGAGTTGCAAAATATCATTATGCTAGTTTCAGAAATAAGTGGGGTGCCCAAGTCTGACGCAGAGAGAATAACTTCTCAGCTAATTGAAGGACTTGAAAACATGAGAGTTACAGACTCTAAAAAACCTGTCAGTGTTAGCCAATCAAGTGATGAAACAAAAGCATCTCCTGAGACACATAAGAAGTCTGACGCCGTGGCTATTCCTGAAGATTTTCGATGCCCAATATCTCTTGAGCTGATGAGAGATCCTGTCATTGTTTCCACAGGACAGACCTACGAGCGTGCCTTCATCCAAAGGTGGATAGACTGTGGAAACCGGACCTGTCCTAAAACTCAACTGAAGCTACAAAACATTACTCTGACCCCAAATTATGTTCTGCGAAGTTTGATATTGCAGTGGTGTGAGGAAAAAGGGATCGAACCACCTACCAGATCTAAGAACGATGGTGCATATCTTGAGGTTGGTGGGGAGAGAGTAGCTATTGAAACATTAGTTCGTAATCTCTCTAGTAGCTCATTAGATGAACGGAAATCGGCTGCTGCCGAAATAAGATCTTTGGCCAAGAAAAGCACTGACAATCGTATACTTCTAGCGGAATCTGGTGCAATATCCGCTCTAGTGAAACTTTTGTCCTCCAAAGACCTGAAAACCCAAGAACATGCAGTTACAGCTCTTCTGAATCTCTCCATATATGATCAGAACAAGGAACTGATAGTAGTTGCGGGTGCCATTGTCCCAATCATACAGGTGTTGAGGAAGGGGGGCATGGAGGCAAGAGAAAATGCAGCTGCAGCTATTTTCAGCTTGTCACTTATTGATGATAACAAGATAACTATTGGAAGCACTCCAGGGGCAATTGAAGCATTAGTTGAGTTGCTGCAGAGTGGCAGTCCAAGGGGTAGAAAAGATGCAGCAACAGCACTGTTCAACTTATGCATATACCAAGCAAACAAGGTCCGTGCAGTTCGAGCAGGAATCCTCGCACCACTGATTCAGATGCTGCAGGATTCATCCAGAAATGGAGCTATTGACGAAGCACTAACAATCTTGTCAGTTCTTGTGAGCCACCATGAGTGTAAAATTGCCATAGCGAAGGCTCATGCTATACCCTTTTTGATAGACTTGTTGAGGTCAAGTCAGGCCCGTAACAAGGAGAATGCTGCAGCCATCTTGCTTGCCCTTTGCAAGAAGGATGCTGAGAACCTCGCTTGTATAGGGAGGTTGGGTGCTCAAATACCACTAACTGAGCTGTCCAAGACCGGCACAGACAGAGCCAAGCGCAAGGCAACCTCTCTCCTGGAGCATCTCAGTAAGTTGCAGGTGCTCTAATTCCACTGTCCATCGCATACCATTTTGCGTGTGTGCGTGTTCTACATGTACGTATACATACGAAAAGCTGTAACCTCATCTCTTATAGAGTGTGAATTTGGTGGGCCGGTAATGGGTTATTTCAGTTACCGGCTTACCCTCAACCTCAAGTGTGCGTTCATTGATTGCTACATAAAAAAGGGTTGGTGTTACAGACTTGTGTATTGTTGCTCATGGGCATGAAGTTTCTTTGAAGATCAAAAATGCAAAATTATTACGGTCAAAAAAAAGA]

[+] EMBL AK102091             [CTGCTGCCACTGCACTACATTACGACGGGACGTTGACATTGGCGATGGCACCTCCCCTCCTCCTCCCCCTCCACGCGGCAGAGTCCTCCTGACCCACACGGCCGCGCCGCGCGCGCTGCGCCTGCTGAGGCGGGAGGGAGCGGGCCCGCCCGCGATGGCGGCGGAGGCCGCGGCGGAGATCGTGCGGGAGATCGCGGCGGTGGGCGCCGCCGATTTGGCTGCGGCCGCCGAGCCGCTGCGCGCGG ACTGCCTCCGCCTCGCTCGGAAGGTCTCGCTGCTGTCGCACCTCGTCGCGGAGGTCGCCGAGGCGGGGGCCGGGGGTGGGGACGCGGACGCGGCGGATTCGTGGTTGGGGGATCTGGTCAGGGCGCTGCAGGCCGCCAGGAGGTTCGTCGAGCTCGGGCGCGCGCCGGCGCGACCGTCGAGGGCGTCGGATCAGGATGCCGTCTGCAACAATGTTGCTGTTCAGTTCAAGTTTGTGACTTGGCAGTTGCAAACAGTTCTAGCAAGACTTCCACAGAGCTGTTTTCAAATATCAGATGAAGTTCAAGAAGAGGTTGATTTAGTGCGAGCTCAGCTTCGAAGAGAAATGGAGAAGAAAGGAGACATTGATGTAAACATTTTTTCAAAATTCCATGATATCTTAGCTCTTCATGTTAGTACTGTTGGATCGCAGTCTGAGCAATCACATGGCCAGCCAGACACACCACAGATGGAAAACTTATGCAACGGTCATCTGGAGTTGCAAAATATCATTATGCTAGTTTCAGAAATAAGTGGGGTGCCCAAGTCTGACGCAGAGAGAATAACTTCTCAGCTAATTGAAGGACTTGAAAACATGAGAGTTACAGACTCTAAAAAACCTGTCAGTGTTAGCCAATCAAGTGATGAAACAAAAGCATCTCCTGAGACACATAAGAAGTCTGACGCCGTGGCTATTCCTGAAGATTTTCGATGCCCAATATCTCTTGAGCTGATGAGAGATCCTGTCATTGTTTCCACAGGACAGACCTACGAGCGTGCCTTCATCCAAAGGTGGATAGACTGTGGAAACCGGACCTGTCCTAAAACTCAACTGAAGCTACAAAACATTACTCTGACCCCAAATTATGTTCTGCGAAGTTTGATATTGCAGTGGTGTGAGGAAAAAGGGATCGAACCACCTACCAGATCTAAGAACGATGGTGCATATCTTGAGGTTGGTGGGGAGAGAGTAGCTATTGAAACATTAGTTCGTAATCTCTCTAGTAGCTCATTAGATGAACGGAAATCGGCTGCTGCCGAAATAAGATCTTTGGCCAAGAAAAGCACTGACAATCGTATACTTCTAGCGGAATCTGGTGCAATATCCGCTCTAGTGAAACTTTTGTCCTCCAAAGACCTGAAAACCCAAGAACATGCAGTTACAGCTCTTCTGAATCTCTCCATATATGATCAGAACAAGGAACTGATAGTAGTTGCGGGTGCCATTGTCCCAATCATACAGGTGTTGAGGAAGGGGGGCATGGAGGCAAGAGAAAATGCAGCTGCAGCTATTTTCAGCTTGTCACTTATTGATGATAACAAGATAACTATTGGAAGCACTCCAGGGGCAATTGAAGCATTAGTTGAGTTGCTGCAGAGTGGCAGTCCAAGGGGTAGAAAAGATGCAGCAACAGCACTGTTCAACTTATGCATATACCAAGCAAACAAGGTCCGTGCAGTTCGAGCAGGAATCCTCGCACCACTGATTCAGATGCTGCAGGATTCATCCAGAAATGGAGCTATTGACGAAGCACTAACAATCTTGTCAGTTCTTGTGAGCCACCATGAGTGTAAAATTGCCATAGCGAAGGCTCATGCTATACCCTTTTTGATAGACTTGTTGAGGTCAAGTCAGGCCCGTAACAAGGAGAATGCTGCAGCCATCTTGCTTGCCCTTTGCAAGAAGGATGCTGAGAACCTCGCTTGTATAGGGAGGTTGGGTGCTCAAATACCACTAACTGAGCTGTCCAAGACCGGCACAGACAGAGCCAAGCGCAAGGCAACCTCTCTCCTGGAGCATCTCAGTAAGTTGCAGGTGCTCTAATTCCACTGTCCATCGCATACCATTTTGCGTGTGTGCGTGTTCTACATGTACGTATACATACGAAAAGCTGTAACCTCATCTCTTATAGAGTGTGAATTTGGTGGGCCGGTAATGGGTTATTTCAGTTACCGGCTTACCCTCAACCTCAAGTGTGCGTTCATTGATTGCTACATAAAAAAGGGTTGGTGTTACAGACTTGTGTATTGTTGCTCATGGGCATGAAGTTTCTTTGAAGATCAAAAATGCAAAATT                   ]
[+] EMBL CB672091             [                                        GGCGACCCTACCTCCCCTCCTCCTCCCCCTCCACGCGGCAGAGTCCTCCTGACCCACACGGCCGCGCCGCGCGCGCTGCGCCTGCTGAGGCGGGAGGGAGCGGGCCCGCCCGCGATGGCGGCGGAGGCCGCGGCGGAGATCGTGCGGGAGATCGCGGCGGTGGGCGCCGTCGATTTGGCTGCGGCCGCCGAGCCGCTGCGCGCGG ACTGCCTCCGCCTCGCTCGGAAGGTCTCGCTGCTGTCGCACCTCGTCGCGGAGGTCGCCGAGGCGGGGGCCGGGGGTGGGGACGCGGACGCGGCGGATTCGTGGTTGGGGGATCTGGTCAGGGCGCTGCAGGCCGCCAGGAGGTTCGTCGAGCTCGGGCGCGCGCCGGCGCGACCGTCGAGGGCGTCGGATCAGGATGCCGTCTGCAACAATGTTGCTGTTCAGTTCAAGTTTGTGACTTGGCAGTTGCAAACAGTTCTAGCAAGACTTCCACAGAGCTGTTTTCAAATATCAGATGAAGTTCAAGAAGAGGTTGATTTAGTGCGAGCTCAGCTTCGAAGAGAAATGGAGAAGAAAGGAGACATTGATGTAAACATTTTTTCAAAATTCCATGATATCTTAGCTCTTCATGTTAGTACTGTTGGATCGCAGTCTGAGCAATCACATGGCCAGCCAGACACACCACAGATGGAAAACTTATGCAACGGTCATCTGGAGTTGCAAAATATCATTATGCTAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB634863             [                                                                                           ACCCACACGGCCGCGCCGCGCGCGCTGCGCCTGCTGAGGCGGGAGGGAGCGGGCCCGCCCGCGATGGCGGCGGAGGCCGCGGCGGAGATCGTGCGGGAGATCGCGGCGGTGGGCGCCGCCGATTTGGCTGCGGCCGCCGAGCCGCTGCGCGCGG ACTGCCTCCGCCTCGCTCGGAAGGTCTCGCTGCTGTCGCACCTCGTCGCGGAGGTCGCCGAGGCGGGGGCCGGGGGTGGGGACGCGGACGCGGCGGATTCGTGGTTGGGGGATCTGGTCAGGGCGCTGCAGGCCGCCAGGAGGTTCGTCGAGCTCGGGCGCGCGCCGGCGCGACCGTCGAGGGCGTCGGATCAGGATGCCGTCTGCAACAATGTTGCTGTTCAGTTCAAGTTTGTGACTTGGCAGTTGCAAACAGTTCTAGCAAGACTTCCACAGAGCTGTTTTCAAATATCAGATGAAGTTCAAGAAGAGGTTGATTTAGTGCGAGCTCAGCTTCAAAGAGAAATGGAGAAGAAAGGAGACATTGATGTAAACATTTTTTCAAAATTCCATGATATCTTAGCTCTTCATGTTAGTACTGTTGGATCGCAGTCTGAGCAATCACATGGCCAGCCAGACACACCACAGATGGAAAACTTATGCAACGGTCATCTGGAGTTGCAAAATATCATTATGCTAGTTTCAGAAATAAGTGGGGTGCCCAAGTCTGACGCAGAGAGAATAACTTCTCAGCTAATTGAAGGACTTGAACACATGAGAGTTACAGATTCT AAAAACCTGTCAGTGTTAGCCAATCg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU097467             [                                                                                                                                                                                                                                             GCGCGCGGTACTGCCTCCGCCTCGCTCGGAAGGTCTCGCTGCTGTCGCACCTCGTCGCGGAGGTCGCCGAGGNGGGGGCCGGGGGTGGGGACGCGGACGCGGCGGATTCGTGGTTGGGGGATCTGGTCAGGGCGCTGCAGGCCGCCAGGAGGTTCGTCGAGCTCGGGCGCGCGCCGGCGCGACCGTCGAGGGCGTCGGATCAGGATGCCGTCTGCAACAATGTTGCTGTTCAGTTCAAGTTTGTGACTTGGCAGTTGCAAACAGTTCTAGCAAGACTTCCACAGAGCTGTTTTCAAATATCAGATGAAGTTCAAGAAGAGGTTGATTTAGTGCGAGCTCAGCTTCGAAGAGAAATGGAGAAGAAAGGAGACATTGATGTAAACATTTTTTCAAAATTCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB634864             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGCTGCAGCTATTTTCAGCTTGTCACTTATTGATGATAACAAGATAACTATTGGAAGCACTCCAGGGGCAATTGAAGCATTAGTTGAGTTGCTGCAGAGTGGCAGTCCAAGGGGTAGAAAAGATGCAGCAACAGCACTGTTCAACTTATGCATATACCAAGCAAACAAGGTCCGTGCAGTTCGAGCAGGAATCCTCGCACCACTGATTCAGATGCTGCAGGATTCATCCAGAAATGGAGCTATTGACGAAGCACTAACAATCTTGTCAGTTCTTGTGAGCCACCATGAGTGTAAAATTGCCATAGCGAAGGCTCATGCTATACCCTTTTTGATAGACTTGTTGAGGTCAAGTCAGGCCCGTAACAAGGAGAATGCTGCAGCCATCTTGCTTGCCCTTTGCAAGAAGGATGCTGAGAACCTCGCTTGTATAGGGAGGTTGGGTGCTCAAATACCACTAACTGAGCTGTCCAAGACCGGCACAGACAGAGCCAAGCGCAAGGCAACCTCTCTCCTGGAGCATCTCAGTAAGTTGCAGGTGCTCTAATTCCACTGTCCATCGCATACCATTTTGCGTGTGTGCGTGTTCTACATGTACGTATACATACGAAAAGCTGTAACCTCATCTCTTATAGAGTGTGAATTTGGTGGGCCGGTAATGGGTTATTTCAGTTACCGGCTTACCCTCAACCTCAAGTGTGCGTTCATTGATTGCTACATAAAAAAGGGTTGGTGTTACAGACTTGTGTATTGTTGCTCATGGGCATGAAGTTTCTTTGAAGATCAAAAATGCAAAATT                   ]
[-] EMBL CB672092             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TCCCTTATTGATGATAACAAGATAACTATTGGAAGCACTCCAGGGGCAATTGAAGCATTAGTTGAGTTGCTGCAGAGTGGCAGTCCAAGGGGTAGAAAAGATGCAGCAACAGCACTGTTCAACTTATGCATATACCAAGCAAACAAGGTCCGTGCAGTTCGAGCAGGAATCCTCGCACCACTGATTCAGATGCTGCAGGATTCATCCAGAAATGGAGCTATTGACGAAGCACTAACAATCTTGTCAGTTCTTGTGAGCCACCATGAGTGTAAAATTGCCATAGCGAAGGCTCATGCTATACCCTTTTTGATAGACTTGTTGAGGTCAAGTCAGGCCCGTAACAAGGAGAATGCTGCAGCCATCTTGCTTGCCCTTTGCAAGAAGGATGCTGAGAACCTCGCTTGTATAGGGAGGTTGGGTGCTCAAATACCACTAACTGAGCTGTCCAAGACCGGCACAGACAGAGCCAAGCGCAAGGCAACCTCTCTCCTGGAGCATCTCAGTAAGTTGCAGGTGCTCTAATTCCACTGTCCATCGCATACCATTTTGCGTGTGTGCGTGTTCTACATGTACGTATACATACGAAAAGCTGTAACCTCATCTCTTATAGAGTGTGAATTTGGTGGGCCGGTAATGGGTTATTTCAGTTACCGGCTTACCCTCAACCTCAAGTGTGCGTTCATTGATTGCTACATAAAAAAGGGTTGGTGTTACAGACTTGTGTATTGTTGCTCATGGGCATGAAGTTTCTTTGAAGATCAAAAATGCAAAATTATTACGGTCAAAAAAAAGA]


>consensus_10291#0 CTGCTGCCACTGCACTACATTACGACGGGACGTTGACATTGGCGATGGCACCTCCCCTCC TCCTCCCCCTCCACGCGGCAGAGTCCTCCTGACCCACACGGCCGCGCCGCGCGCGCTGCG CCTGCTGAGGCGGGAGGGAGCGGGCCCGCCCGCGATGGCGGCGGAGGCCGCGGCGGAGAT CGTGCGGGAGATCGCGGCGGTGGGCGCCGCCGATTTGGCTGCGGCCGCCGAGCCGCTGCG CGCGGACTGCCTCCGCCTCGCTCGGAAGGTCTCGCTGCTGTCGCACCTCGTCGCGGAGGT CGCCGAGGCGGGGGCCGGGGGTGGGGACGCGGACGCGGCGGATTCGTGGTTGGGGGATCT GGTCAGGGCGCTGCAGGCCGCCAGGAGGTTCGTCGAGCTCGGGCGCGCGCCGGCGCGACC GTCGAGGGCGTCGGATCAGGATGCCGTCTGCAACAATGTTGCTGTTCAGTTCAAGTTTGT GACTTGGCAGTTGCAAACAGTTCTAGCAAGACTTCCACAGAGCTGTTTTCAAATATCAGA TGAAGTTCAAGAAGAGGTTGATTTAGTGCGAGCTCAGCTTCGAAGAGAAATGGAGAAGAA AGGAGACATTGATGTAAACATTTTTTCAAAATTCCATGATATCTTAGCTCTTCATGTTAG TACTGTTGGATCGCAGTCTGAGCAATCACATGGCCAGCCAGACACACCACAGATGGAAAA CTTATGCAACGGTCATCTGGAGTTGCAAAATATCATTATGCTAGTTTCAGAAATAAGTGG GGTGCCCAAGTCTGACGCAGAGAGAATAACTTCTCAGCTAATTGAAGGACTTGAAAACAT GAGAGTTACAGACTCTAAAAAACCTGTCAGTGTTAGCCAATCAAGTGATGAAACAAAAGC ATCTCCTGAGACACATAAGAAGTCTGACGCCGTGGCTATTCCTGAAGATTTTCGATGCCC AATATCTCTTGAGCTGATGAGAGATCCTGTCATTGTTTCCACAGGACAGACCTACGAGCG TGCCTTCATCCAAAGGTGGATAGACTGTGGAAACCGGACCTGTCCTAAAACTCAACTGAA GCTACAAAACATTACTCTGACCCCAAATTATGTTCTGCGAAGTTTGATATTGCAGTGGTG TGAGGAAAAAGGGATCGAACCACCTACCAGATCTAAGAACGATGGTGCATATCTTGAGGT TGGTGGGGAGAGAGTAGCTATTGAAACATTAGTTCGTAATCTCTCTAGTAGCTCATTAGA TGAACGGAAATCGGCTGCTGCCGAAATAAGATCTTTGGCCAAGAAAAGCACTGACAATCG TATACTTCTAGCGGAATCTGGTGCAATATCCGCTCTAGTGAAACTTTTGTCCTCCAAAGA CCTGAAAACCCAAGAACATGCAGTTACAGCTCTTCTGAATCTCTCCATATATGATCAGAA CAAGGAACTGATAGTAGTTGCGGGTGCCATTGTCCCAATCATACAGGTGTTGAGGAAGGG GGGCATGGAGGCAAGAGAAAATGCAGCTGCAGCTATTTTCAGCTTGTCACTTATTGATGA TAACAAGATAACTATTGGAAGCACTCCAGGGGCAATTGAAGCATTAGTTGAGTTGCTGCA GAGTGGCAGTCCAAGGGGTAGAAAAGATGCAGCAACAGCACTGTTCAACTTATGCATATA CCAAGCAAACAAGGTCCGTGCAGTTCGAGCAGGAATCCTCGCACCACTGATTCAGATGCT GCAGGATTCATCCAGAAATGGAGCTATTGACGAAGCACTAACAATCTTGTCAGTTCTTGT GAGCCACCATGAGTGTAAAATTGCCATAGCGAAGGCTCATGCTATACCCTTTTTGATAGA CTTGTTGAGGTCAAGTCAGGCCCGTAACAAGGAGAATGCTGCAGCCATCTTGCTTGCCCT TTGCAAGAAGGATGCTGAGAACCTCGCTTGTATAGGGAGGTTGGGTGCTCAAATACCACT AACTGAGCTGTCCAAGACCGGCACAGACAGAGCCAAGCGCAAGGCAACCTCTCTCCTGGA GCATCTCAGTAAGTTGCAGGTGCTCTAATTCCACTGTCCATCGCATACCATTTTGCGTGT GTGCGTGTTCTACATGTACGTATACATACGAAAAGCTGTAACCTCATCTCTTATAGAGTG TGAATTTGGTGGGCCGGTAATGGGTTATTTCAGTTACCGGCTTACCCTCAACCTCAAGTG TGCGTTCATTGATTGCTACATAAAAAAGGGTTGGTGTTACAGACTTGTGTATTGTTGCTC ATGGGCATGAAGTTTCTTTGAAGATCAAAAATGCAAAATTATTACGGTCAAAAAAAAGA



consensusID : consensus_10291#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 249
fasta sequence
                              [GGAGCATCNCAGTAAGTTGCAGNTGCTCTAAATCCACTGTCCATCGCATACCAATTTGCGTGTGTGCGTGTTCTACATGTACGTATACATACGAAAAGCTGTAACCTCANCTCTTATAGAGTGTGAANTTGGTGGNCCGGTAATGGGTTANTTCAGTTANCGGCTTACCCTCAACCTCAAGTGTGCGTNCATTGATTGCTACATAAAAAAGGGTTGGTGTTACAGNCTTGTGAAAANAAAAAAAAAAAA]

[+] EMBL AU033197             [GGAGCATCNCAGTAAGTTGCAGNTGCTCTAAATCCACTGTCCATCGCATACCAATTTGCGTGTGTGCGTGTTCTACATGTACGTATACATACGAAAAGCTGTAACCTCANCTCTTATAGAGTGTGAANTTGGTGGNCCGGTAATGGGTTANTTCAGTTANCGGCTTACCCTCAACCTCAAGTGTGCGTNCATTGATTGCTACATAAAAAAGGGTTGGTGTTACAGNCTTGTGAAAANAAAAAAAAAAAA]


>consensus_10291#1 GGAGCATCNCAGTAAGTTGCAGNTGCTCTAAATCCACTGTCCATCGCATACCAATTTGCG TGTGTGCGTGTTCTACATGTACGTATACATACGAAAAGCTGTAACCTCANCTCTTATAGA GTGTGAANTTGGTGGNCCGGTAATGGGTTANTTCAGTTANCGGCTTACCCTCAACCTCAA GTGTGCGTNCATTGATTGCTACATAAAAAAGGGTTGGTGTTACAGNCTTGTGAAAANAAA AAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10291#0      CTGCTGCCACTGCACTACATTACGACGGGACGTTGACATTGGCGATGGCACCTCCCCTCC 60
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      TCCTCCCCCTCCACGCGGCAGAGTCCTCCTGACCCACACGGCCGCGCCGCGCGCGCTGCG 120
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      CCTGCTGAGGCGGGAGGGAGCGGGCCCGCCCGCGATGGCGGCGGAGGCCGCGGCGGAGAT 180
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      CGTGCGGGAGATCGCGGCGGTGGGCGCCGCCGATTTGGCTGCGGCCGCCGAGCCGCTGCG 240
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      CGCGGACTGCCTCCGCCTCGCTCGGAAGGTCTCGCTGCTGTCGCACCTCGTCGCGGAGGT 300
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      CGCCGAGGCGGGGGCCGGGGGTGGGGACGCGGACGCGGCGGATTCGTGGTTGGGGGATCT 360
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      GGTCAGGGCGCTGCAGGCCGCCAGGAGGTTCGTCGAGCTCGGGCGCGCGCCGGCGCGACC 420
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      GTCGAGGGCGTCGGATCAGGATGCCGTCTGCAACAATGTTGCTGTTCAGTTCAAGTTTGT 480
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      GACTTGGCAGTTGCAAACAGTTCTAGCAAGACTTCCACAGAGCTGTTTTCAAATATCAGA 540
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      TGAAGTTCAAGAAGAGGTTGATTTAGTGCGAGCTCAGCTTCGAAGAGAAATGGAGAAGAA 600
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      AGGAGACATTGATGTAAACATTTTTTCAAAATTCCATGATATCTTAGCTCTTCATGTTAG 660
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      TACTGTTGGATCGCAGTCTGAGCAATCACATGGCCAGCCAGACACACCACAGATGGAAAA 720
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      CTTATGCAACGGTCATCTGGAGTTGCAAAATATCATTATGCTAGTTTCAGAAATAAGTGG 780
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      GGTGCCCAAGTCTGACGCAGAGAGAATAACTTCTCAGCTAATTGAAGGACTTGAAAACAT 840
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      GAGAGTTACAGACTCTAAAAAACCTGTCAGTGTTAGCCAATCAAGTGATGAAACAAAAGC 900
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      ATCTCCTGAGACACATAAGAAGTCTGACGCCGTGGCTATTCCTGAAGATTTTCGATGCCC 960
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      AATATCTCTTGAGCTGATGAGAGATCCTGTCATTGTTTCCACAGGACAGACCTACGAGCG 1020
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      TGCCTTCATCCAAAGGTGGATAGACTGTGGAAACCGGACCTGTCCTAAAACTCAACTGAA 1080
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      GCTACAAAACATTACTCTGACCCCAAATTATGTTCTGCGAAGTTTGATATTGCAGTGGTG 1140
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      TGAGGAAAAAGGGATCGAACCACCTACCAGATCTAAGAACGATGGTGCATATCTTGAGGT 1200
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      TGGTGGGGAGAGAGTAGCTATTGAAACATTAGTTCGTAATCTCTCTAGTAGCTCATTAGA 1260
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      TGAACGGAAATCGGCTGCTGCCGAAATAAGATCTTTGGCCAAGAAAAGCACTGACAATCG 1320
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      TATACTTCTAGCGGAATCTGGTGCAATATCCGCTCTAGTGAAACTTTTGTCCTCCAAAGA 1380
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      CCTGAAAACCCAAGAACATGCAGTTACAGCTCTTCTGAATCTCTCCATATATGATCAGAA 1440
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      CAAGGAACTGATAGTAGTTGCGGGTGCCATTGTCCCAATCATACAGGTGTTGAGGAAGGG 1500
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      GGGCATGGAGGCAAGAGAAAATGCAGCTGCAGCTATTTTCAGCTTGTCACTTATTGATGA 1560
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      TAACAAGATAACTATTGGAAGCACTCCAGGGGCAATTGAAGCATTAGTTGAGTTGCTGCA 1620
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      GAGTGGCAGTCCAAGGGGTAGAAAAGATGCAGCAACAGCACTGTTCAACTTATGCATATA 1680
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      CCAAGCAAACAAGGTCCGTGCAGTTCGAGCAGGAATCCTCGCACCACTGATTCAGATGCT 1740
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      GCAGGATTCATCCAGAAATGGAGCTATTGACGAAGCACTAACAATCTTGTCAGTTCTTGT 1800
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      GAGCCACCATGAGTGTAAAATTGCCATAGCGAAGGCTCATGCTATACCCTTTTTGATAGA 1860
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      CTTGTTGAGGTCAAGTCAGGCCCGTAACAAGGAGAATGCTGCAGCCATCTTGCTTGCCCT 1920
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      TTGCAAGAAGGATGCTGAGAACCTCGCTTGTATAGGGAGGTTGGGTGCTCAAATACCACT 1980
consensus_10291#1      ------------------------------------------------------------
                                                                                   

consensus_10291#0      AACTGAGCTGTCCAAGACCGGCACAGACAGAGCCAAGCGCAAGGCAACCTCTCTCCTGGA 2040
consensus_10291#1      ---------------------------------------------------------GGA 3
                                                                                ***

consensus_10291#0      GCATCTCAGTAAGTTGCAGGTGCTCTAATTCCACTGTCCATCGCATACCATTTTGCGTGT 2100
consensus_10291#1      GCATCNCAGTAAGTTGCAGNTGCTCTAAATCCACTGTCCATCGCATACCAATTTGCGTGT 63
                       ***** ************* ******** ********************* *********

consensus_10291#0      GTGCGTGTTCTACATGTACGTATACATACGAAAAGCTGTAACCTCATCTCTTATAGAGTG 2160
consensus_10291#1      GTGCGTGTTCTACATGTACGTATACATACGAAAAGCTGTAACCTCANCTCTTATAGAGTG 123
                       ********************************************** *************

consensus_10291#0      TGAATTTGGTGGGCCGGTAATGGGTTATTTCAGTTACCGGCTTACCCTCAACCTCAAGTG 2220
consensus_10291#1      TGAANTTGGTGGNCCGGTAATGGGTTANTTCAGTTANCGGCTTACCCTCAACCTCAAGTG 183
                       **** ******* ************** ******** ***********************

consensus_10291#0      TGCGTTCATTGATTGCTACATAAAAAAGGGTTGGTGTTACAGACTTGTGTATTGTTGCTC 2280
consensus_10291#1      TGCGTNCATTGATTGCTACATAAAAAAGGGTTGGTGTTACAGNCTTGTGAA-----AANA 238
                       ***** ************************************ ****** *         

consensus_10291#0      ATGGGCATGAAGTTTCTTTGAAGATCAAAAATGCAAAATTATTACGGTCAAAAAAAAGA 2339
consensus_10291#1      AAAAAAAAAAA------------------------------------------------ 249
                       *     *  **                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)