These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10302#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1843 fasta sequence [TGCAGAGGAGGACGAAGTGAGCCCCGGCCACCGCCCGCCGCCGCCGCCGCCATGGCGCTCCGCCGCATCAACCTCCGGAAGAAGCCGCTCCTCCTCTTCCCGCGGCCCTTCTCCTCGTCCTCCTCACCCAACCCTCCCTTCCCTCCTCCCCCGCCACCGCCCAACGACCGCGACGACGCCTCACCAAAGCCCAGCGAGGGGGAGGGGCGCAACCCGGCGGCCTCGCTCTTCCAGGACTTGCGCGACCGGCTCATGTCCACCCCCTCGCATCTGCCGTCGCGCCGGATCCCGACCGCTCCGCCGCCCCGCCCCTCGGGGAACGCCGAGCCGGTGGCCTCTATCGACGACATCCGCCGCCAGCTCGAGTCCTACCGCGGATCCCTCGCCGCGAGGGGCGCCCCTCCTGGCTCCTCCCCCGACGGCGCCGCCCCCTCCTTGCTCGACCTGGTGAGGAGCACCTCGTCCCCGACCTCACCTCAGGGCCCCAACTCCGGGCACTTCTCATCCCTCGCCGAGAGCTTGCGCAATCTCCCCTCTGGACGGCAGCCGCAACAGCGGAGGCAGCCTCGTTCGACAACCCCGTTTTTGTCCCCCACTGCGCATCCCATCTTCGGGAGGGAGCTCGGGGAGAACGCGAGAAAGGCGGAGGGGAAAGAGGAGAATTCTGCCATTGAGCTTAAGAAGGAATACAGCTACGCAGAGCTCGGGAAGAAGCTCGGCCAACTGCGACCGTCCGGCGCAGGGAACGATGGAAAGGAGTGGTTCTCGCTTGAGGAGCTGCAGGGACGGATCGCCAAGCTCGCAAATTTGGACATTGCTGATGACATGCGGTTAGGCGGGCAGTATGTGGCACTCCGGAAGAGCCTCCTGGGAATCCAAGCCGATCAGAAAACAAAGGATGATATTAAGAAGACAAGATCCATGCAGGGATTGTCATTTTTGGCGAACATTGGTGGGCCGGCAACGCCGCAATACTTGCAGCATCCTCCACAGGAGGAGTTGCTAGAGAGGTATTTCCATCCAGACCACATGTCGTCGGAAGAGAAGATGAAGTTAGAGCTCCAGAGGGTGAGGGACGAGTTTAAGATGTCTGAAAATGACTGTGGCTCTGCGCGAGTTCAAATTGCCCAATTGACCGTGAAAATCAAGCATCT-GTCAACTGTTCTACACAAAAAGGATAAACATTCGAGAAAGGGGCTTCAGGATATGGTCCAAAGGAGGAAGAAGTACCTCAAGTACCTGCGTAGAACTGACTGGGATTCATATTGTCTTGTCCTGTCGAAGCTGGGTCTTCGTGATGTACCGGAGTACAAAGCTCCTGAT-TACAA-GA-ACAAATCCACCAGTAAAGCCAAATCTAAGAAGAGCAAGAGCAAGAAAAGAAAGATGAAAGCATAAATCTGTAACCAAGATCGTCTTCACCTCTCCCTCCCTGCGGCCTTGAACTGCATGGCCAGCAAGGTTGATGATCGAAAATACAGACGCTCTGCTCGAAATGGGTTTGATCCATTCTCTCAGTGTTGCTCGAAATGGGTTCGATCCAGTCTCTCAGTGCTGTATCTTTTGTAGTAATAACAACGGATTGTTAATCCCCTTCTCATTTTCCTTTTTGGTAGCAATGTT-TCTTATTTTTCATGAGAAGGTGCAGCCATCCTGTAACAGCTACATGTGTTTTTTTTATAGAGTTGAGTTCTCCCATTCTACTTCCTGGGAGAACGGGATTGATCATTGATGAATACTAATAACTTCTCTTAAAAAAAAAATCTGATTCCTTGTTATGGAGGTGATGCTGGGTGGCACCACCCAAGTTTTAATCCATAAGATTATAATTGTGTTTTTTAAAAAA] [+] EMBL AK063404 [TGCAGAGGAGGACGAAGTGAGCCCCGGCCACCGCCCGCCGCCGCCGCCGCCATGGCGCTCCGCCGCATCAACCTCCGGAAGAAGCCGCTCCTCCTCTTCCCGCGGCCCTTCTCCTCGTCCTCCTCACCCAACCCTCCCTTCCCTCCTCCCCCGCCACCGCCCAACGACCGCGACGACGCCTCACCAAAGCCCAGCGAGGGGGAGGGGCGCAACCCGGCGGCCTCGCTCTTCCAGGACTTGCGCGACCGGCTCATGTCCACCCCCTCGCATCTGCCGTCGCGCCGGATCCCGACCGCTCCGCCGCCCCGCCCCTCGGGGAACGCCGAGCCGGTGGCCTCTATCGACGACATCCGCCGCCAGCTCGAGTCCTACCGCGGATCCCTCGCCGCGAGGGGCGCCCCTCCTGGCTCCTCCCCCGACGGCGCCGCCCCCTCCTTGCTCGACCTGGTGAGGAGCACCTCGTCCCCGACCTCACCTCAGGGCCCCAACTCCGGGCACTTCTCATCCCTCGCCGAGAGCTTGCGCAATCTCCCCTCTGGACGGCAGCCGCAACAGCGGAGGCAGCCTCGTTCGACAACCCCGTTTTTGTCCCCCACTGCGCATCCCATCTTCGGGAGGGAGCTCGGGGAGAACGCGAGAAAGGCGGAGGGGAAAGAGGAGAATTCTGCCATTGAGCTTAAGAAGGAATACAGCTACGCAGAGCTCGGGAAGAAGCTCGGCCAACTGCGACCGTCCGGCGCAGGGAACGATGGAAAGGAGTGGTTCTCGCTTGAGGAGCTGCAGGGACGGATCGCCAAGCTCGCAAATTTGGACATTGCTGATGACATGCGGTTAGGCGGGCAGTATGTGGCACTCCGGAAGAGCCTCCTGGGAATCCAAGCCGATCAGAAAACAAAGGATGATATTAAGAAGACAAGATCCATGCAGGGATTGTCATTTTTGGCGAACATTGGTGGGCCGGCAACGCCGCAATACTTGCAGCATCCTCCACAGGAGGAGTTGCTAGAGAGGTATTTCCATCCAGACCACATGTCGTCGGAAGAGAAGATGAAGTTAGAGCTCCAGAGGGTGAGGGACGAGTTTAAGATGTCTGAAAATGACTGTGGCTCTGCGCGAGTTCAAATTGCCCAATTGACCGTGAAAATCAAGCATCT GTCAACTGTTCTACACAAAAAGGATAAACATTCGAGAAAGGGGCTTCAGGATATGGTCCAAAGGAGGAAGAAGTACCTCAAGTACCTGCGTAGAACTGACTGGGATTCATATTGTCTTGTCCTGTCGAAGCTGGGTCTTCGTGATGTACCGGAGTACAAAGCTCCTGAT TACAA GA ACAAATCCACCAGTAAAGCCAAATCTAAGAAGAGCAAGAGCAAGAAAAGAAAGATGAAAGCATAAATCTGTAACCAAGATCGTCTTCACCTCTCCCTCCCTGCGGCCTTGAACTGCATGGCCAGCAAGGTTGATGATCGAAAATACAGACGCTCTGCTCGAAATGGGTTTGATCCATTCTCTCAGTGTTGCTCGAAATGGGTTCGATCCAGTCTCTCAGTGCTGTATCTTTTGTAGTAATAACAACGGATTGTTAATCCCCTTCTCATTTTCCTTTTTGGTAGCAATGTT TCTTATTTTTCATGAGAAGGTGCAGCCATCCTGTAACAGCTACATGTGTTTTTTTTATAGAGTTGAGTTCTCCCATTCTACTTCCTGGGAGAACGGG ] [-] EMBL CB648117 [ CAAATTGCCCAATTGACCGTGAAAATCAAGCATCT GTCAACTGTTTTACACAAAAAGGATAAACATTCGAGAAAGGGGCTTCAGGATATGGTCCAAAGGAGGAAGAAGTCCCTCAAGTCCCTGGGTAGAACTGACTGGGATTCATATTGTTTTGTCCTGTAGAAGCTGGGTTTTTGTGATGTACCGGAGTACAAAGCTCCTGAT TACAA GA ACAAATCCCCCAGTAAAGCCAAATTTAAGAAGAGCAAGAGCAAGAAAAGAAAGATGAAAGCATAAATTTGTAACCAAGATGGTTTTCACCTTTCCCTCCCTGGGGCCTTGAACTGCATGGCCAGCAAGGTTGATGATCGAAAATACAGACGCTTTGCTCGAAATGGGTTTGATCCATTTTTTCAGTGTTGCTCGAAATGGGTTCGATCCAGTCTTTCAGTGCTGTATTTTTTGTAGTAATAACAACGGATTGTTAATCCCCTTCTCATTTTCCTTTTTGGTAGCAATGTT TTTTATTTTTCATGAGAAGGTGCAGCCATCCTGTAACAGCTACATGGGTTTTTTTTATAGAGTTGAGTTTTCCCATTTTACTTCCTGGGAGAACGGGATTGATCATTGATGAATACTAATA ] [+] EMBL AU082477 [ CAGGCATCTGGCCAACTGTTCTACNCAAAAAGGATAACCATTCGAGAAAGGGGCTTCAGGATATGGTCCAAAGNAGGAAGAAGTNCCTCAAGTACCTGCGTAGAACTGACTGGGATTCATATTGTCTTGTCCTGTCGAAGCTGGGTCTTCGTGATGTACCGGAGTACAAAGCTCCTGAT TACAA GA ACAAATCCACCAGTAAAGCCAAATCTAAGAAGAGCAAGAGCAAGAAAAGAAAGATGAAAGCATAAATCTGTAACCAAGATCGTCTTCACCTCTCCCTCCCTGCGGCCTTGAACTGCATGGCCAGCAAGGTTGATGATCGAAAATACAGACGCTCTGCTCGAAATGGGTTTGATCCATTCTCTCAGTGTTGCTCGAAATGGGTTCGATCCAGTCTCTCAGTGCTGTATCTTTTGTAGTAATAACAACGGATTGTTAATCCCCTTCTCATTTTCCTTTTTGGTAGCAATGTT TCTTATTTTTCATGAGAAGGTGCAGCCATCCTGTAACAGCTACATGTGTTTTTTTTATAGAGTTGAGTTCTCCCATTCTACTTCCTGGGAGAACGGGATTGATCATTGATGAATACTAATAACTTCTCTTAAAAAAAAAA ] [+] EMBL AU065518 [ TCT GTCAACTGTTCTACACAAAAAGGATAAACATTCGAGAAAGGGGCTTCAGGATATGGTCCAAAGGAGGAAGAAGTACCTCAAGTACCTGCGTAGAACTGACTGGGATTCATATTGTCTTGTCCTGTCGAAGCTGGGTCTTCGTGATGTACCGGAGTACAAAGCTCCTGAT TACAA GA ACAAATCCACCAGTAAAGCCAAATCTAAGAAGAGCAAGAGCAAGAAAAGAAAGATGAAAGCATAAATCTGTAACCAAGATCGTCTTCACCTCTCCCTCCCTGCGGCCTTGAACTGCATGGCCAGCAAGGTTGATGATCGAAAATACAGACGCTCTGCTCGAAATGGGTTTGATCCATTCTCTCAGTGTTGCTCGAAATGGGTTCGATCCAGTCTCTCAGTGCTGTATCTTTTGTAGTAATAACAACGGATTGNTAATCCCCTTCTCATTTTCCTTTTTGGTAGCAATGTTNTCTTATTTTTCATGAGAAGGTGCAGCCATCCTGTAACAGCTACATGTGTTTTTTTTATAGAGTTGAGTTCTCCCATTCTACTTCCTGGGAGAACGGGATTGATCATTGATGAAT CTAATAA ] [-] EMBL CB647460 [ AACATTCGAGAAAGGGGCTTCAGGATATGGTCCAAAGGAGGAAAAAGTCCCTCAAGTCCCTGGGTAGAACTGACTGGGATTCATATTGTTTTGTCCTGTCGAAGCTGGGTTTTCGTGATGTACCGGAGTACAAAGCTCCTGAT TCCAA GA ACAAATCCCCCCGTAAAGCCAAATTTAAGAAGAGCAAGAGCAAGAAAAGAAAGATGAAAGCATAAATTTGTAACCAAGATTGTTTTCCCCTTTCCCTCCCTGGGGCCTTGAATTGCATGGCCACCAAGGTTGATGATCGAAAATCCCGACGCTCTGCTCGAAAAGGGTTTGATCCATTTTTTCAGGGTTGCTCGAAAAGGGTTCGATCCAGTCTTTCAGTGCGGTATTTTTTGTAGTAATAACAACGGATTGTTAATCCCCTTCTCATTTTCCTTTTTGGTAGCAATGTT TTTTATTTTTCATGAGAAGGGGCAGCCATCCTGTAACAGCTACATGGGTTTTTTTTATAGAGTTGAGTTTTCCCATTTTACTTCCTGGGAGAACGGGATTGATCATTGATGAATACTAATA ] [+] EMBL AA752429 [ cgAGCTKGGTCTTCGTGATGTACCGGAGTACAAAGCTCCTGAT TACAA TA ACAAATCCACCAGTAAAGCCAAATCTAAGAAGAGCGAGAGCGAGAAAAGARAGATGAAAGCATAAATCTGTAACCAAGATCGTCTTCACCTCTCCCTCCCTGCGGCCTTGAACTGCATGGCCAGCAAGGTTGATGATCGAAAATACAGACGCTCTGCTCGAAATGGGTTTGATCCATTCTCTCAGTGTTGCTCGAAATGGGTTCGATCCAGTCTCTCAGTGCTGTATCTTTTGTAGTAATAACAACGGATT ] [+] EMBL BQ906000 [ AGTACAAAGCTCCTGATNTACAATGAGACGAATCCACCAGTAAAGCCCAATCTAAGAAGAGCAAGAGCAAGAAAAGAAAGATGAAAGCATAAATCTGTAACCAAGATCGTCTTCACCTCTCCCTCCCTGCGGCCTTGAACTGCATGGCCAGCAAGGTTGATGATCGAAAATACAGACGCTCTGCTCGAAATGGGTTTGATCCATTCTCTCAGTGTTGCTCGAAATGGGTTCGATCCAGTCTCTCAGTGCTGTATCTTTTGTAGTAATAACAACGGATTGTTAATCCCCTTCTCATTTTCTTTTTTGGTAGCAATGTT TCTTATTTTTCATGAGAAGGTGCAGCCATCCTGTAACAGCTACATGTGTTTTTTTTATAGAGTTGAGTTCTCCCATTCTACTTCCTGGGAGAACGGGATTGATCATTGATGAATACTAATAACTTCTCTTATTCACTGTGTCTGATTCCTTGTTATGGAGGTGATGCTGGGTGGCACCACCCAAGTTTTAATCCATAAGATTATAATTGTGTTTTTTAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||