These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10309#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2177 fasta sequence [AATAATTCTGCCCCTTGTCCGCACGCACGCGCCCAGCTCAGCTCGGCCCCCTCCCCTCCCCGCTCCCACCGCCTCCCGAATCCGGCCTCCAAATCTCGCCGGGATCCGCCGCGCGGCCGCACGGATTCGCCTCCCGGAGCCGCGGCTCTGTCGGCGCGGGGGCGGGAGAAGGGGGGCCTGCTCCGGCCCGGGGGACGCCGGATCTGGGTCGGGGGGTTTCTCTTCGGGCTCGGAGGAGGAAGGGCAAGTCACGGTGGCGTTAGTGGTGGTGGTGGTTGTTGCAGCGGCGGCGGTTGATTTGTGGGTGTGATTCGTGGGCTTCTTGGTGTCGGTGTGCCTGGTGCTGGTGACGCGCCATGGATTACAACCCCGTGGACAGCAGCGGAACTGATGATGATCTTCCACCGACATATCAGAACAGAGGTGTAAGAGGCAGTGGACGTGTTAGTGGTAATGGGAGAGATATTGTTAGCGCTGTTCCATATAATAGAACTAAGCCACAGACAGATATGGAAACACAAATTCATCAGCTTGAGCAAGATGCATATTGTTCTGTTCTTCGTGCATTTAAAGCACAATCTGATGCTATTTCATGGGAAAAGGAAGGTCTTATCACTGAACTTAGAAAGGAACTTAGAGTGTCTGACAAAGAGCACAGGGAGTTGTTAAACAGAGTGAACGGTGATGATATCATTCAAAGAATAAGGGAATGGAGAGAGACAAAAGGTGGGCTTCAGGCAGATATGGTGAATAATGCTCAACGTTCACATGATCGCGTGCCCAGCCCTACCACCTCCGCTCGCAAGAGGCAGAAGACGTCACAATCCATCCCTTCTGCTTCTGTACCTGTACCATCTCCTGCTGTGCATTCACAGACACTGACTGCCCCAATGCAACCATTGTCATCAGCAACAAAAAAAGTAGCTCCACCTGGTACAAAAGGCAAAAAGACTAAGCCAGGCCAGAAGATACCAGGTGGCTCTGCAATCAAGACCATGTCTTCTGCTGGCCCTAGTGGTAGGGGACCAATTATGAATAAGAACCTATCAGGTGGTCTTCCTACTGAACCAATATCAGTAAATCCATTAATCGGACGGAAGGTCATGACTCGGTGGCCTGATGATAATAGCTTTTATGAGGCTGTTATAACTGACTATGATCCACAGCTGGATCGTTATGCACTGGTTTATGACATAAATACAGCAGATGAAACCTGGGAGTGGGTTGACTTTAAAGAGATGGCACCTAAAGATATTAGATGGGAAGGTGGCGACCCTGGAATAATCCAGCAAGGCCGTGGCGCTACTGTTCATGGTGGTAAGAAGTCAAGCAGCCGTAATGGCCCCATGTCAGGTCCTGGAAGGGGGAGCAGAGGGCCGCAAAAGAACACATCCAGGAAAGAGTTTCCACCTTCACAAAATGGTGTTGGGAAGAAAAGCTCTGATTGCATAGAAATACTCCATACGGAGTCATTAATAAAGGAGGTGGAGCGGGTTTTCAGCGCAAGCAACCCTGATCCTCTTGAAATGGAGAAAGCAAAGAAAGTGCTCAAGGAGCATGAACAATCTTTGATTGATGCAATTGCAAGGCTTGCTGAGGCATCTGATGGCGAAAGT---GAAGAAAGGGCACAACCCTTGCAACACAACCGTGGATGGAGAAACCATCATGGTGGAAACTATGCAAATGATATGACTATCGATGGTCACATGGTTGGAGATGCTGATGCCCTGTAAACAATTACTGAACTGTATACAGAACCCTTTTTTTATCTATTGTATAACTTCAATGCTGATTTATTCTAGATTAGCACTAGGTTCAAAAGTATCCTCTAATTGTTTCAAATGAGTTTATCTGTTATGATGGGCCTCTCGAATTGTGGACTTTCGGAAAATCAATATTGGTGAGAGGAGAGCGTTTTGTAGAATTGTAGTCTAGCAGATCATGATGACACTGTAAATTTAGATGTGGAGATATTTTTGGTGTCGTACTACTTTCAGATGTGACTACTCACTGGAGATGTATGTTGTTTTGTACTCGCTAGCAAGCAGAACACGCATTTTTTTTGTTTTTTTTTGCAATGTTTCTTTGAGCCATGGTTGATACTTTTTAGAAAGGGTAATTTGGAACCATGCCATTATAATTTTTCAAAGTTTGAGATATGCCATCGGTATCTCAAT] [+] EMBL AK102227 [AATAATTCTGCCCCTTGTCCGCACGCACGCGCCCAGCTCAGCTCGGCCCCCTCCCCTCCCCGCTCCCACCGCCTCCCGAATCCGGCCTCCAAATCTCGCCGGGATCCGCCGCGCGGCCGCACGGATTCGCCTCCCGGAGCCGCGGCTCTGTCGGCGCGGGGGCGGGAGAAGGGGGGCCTGCTCCGGCCCGGGGGACGCCGGATCTGGGTCGGGGGGTTTCTCTTCGGGCTCGGAGGAGGAAGGGCAAGTCACGGTGGCGTTAGTGGTGGTGGTGGTTGTTGCAGCGGCGGCGGTTGATTTGTGGGTGTGATTCGTGGGCTTCTTGGTGTCGGTGTGCCTGGTGCTGGTGACGCGCCATGGATTACAACCCCGTGGACAGCAGCGGAACTGATGATGATCTTCCACCGACATATCAGAACAGAGGTGTAAGAGGCAGTGGACGTGTTAGTGGTAATGGGAGAGATATTGTTAGCGCTGTTCCATATAATAGAACTAAGCCACAGACAGATATGGAAACACAAATTCATCAGCTTGAGCAAGATGCATATTGTTCTGTTCTTCGTGCATTTAAAGCACAATCTGATGCTATTTCATGGGAAAAGGAAGGTCTTATCACTGAACTTAGAAAGGAACTTAGAGTGTCTGACAAAGAGCACAGGGAGTTGTTAAACAGAGTGAACGGTGATGATATCATTCAAAGAATAAGGGAATGGAGAGAGACAAAAGGTGGGCTTCAGGCAGATATGGTGAATAATGCTCAACGTTCACATGATCGCGTGCCCAGCCCTACCACCTCCGCTCGCAAGAGGCAGAAGACGTCACAATCCATCCCTTCTGCTTCTGTACCTGTACCATCTCCTGCTGTGCATTCACAGACACTGACTGCCCCAATGCAACCATTGTCATCAGCAACAAAAAAAGTAGCTCCACCTGGTACAAAAGGCAAAAAGACTAAGCCAGGCCAGAAGATACCAGGTGGCTCTGCAATCAAGACCATGTCTTCTGCTGGCCCTAGTGGTAGGGGACCAATTATGAATAAGAACCTATCAGGTGGTCTTCCTACTGAACCAATATCAGTAAATCCATTAATCGGACGGAAGGTCATGACTCGGTGGCCTGATGATAATAGCTTTTATGAGGCTGTTATAACTGACTATGATCCACAGCTGGATCGTTATGCACTGGTTTATGACATAAATACAGCAGATGAAACCTGGGAGTGGGTTGACTTTAAAGAGATGGCACCTAAAGATATTAGATGGGAAGGTGGCGACCCTGGAATAATCCAGCAAGGCCGTGGCGCTACTGTTCATGGTGGTAAGAAGTCAAGCAGCCGTAATGGCCCCATGTCAGGTCCTGGAAGGGGGAGCAGAGGGCCGCAAAAGAACACATCCAGGAAAGAGTTTCCACCTTCACAAAATGGTGTTGGGAAGAAAAGCTCTGATTGCATAGAAATACTCCATACGGAGTCATTAATAAAGGAGGTGGAGCGGGTTTTCAGCGCAAGCAACCCTGATCCTCTTGAAATGGAGAAAGCAAAGAAAGTGCTCAAGGAGCATGAACAATCTTTGATTGATGCAATTGCAAGGCTTGCTGAGGCATCTGATGGCGAAAGT GAAGAAAGGGCACAACCCTTGCAACACAACCGTGGATGGAGAAACCATCATGGTGGAAACTATGCAAATGATATGACTATCGATGGTCACATGGTTGGAGATGCTGATGCCCTGTAAACAATTACTGAACTGTATACAGAACCCTTTTTTTATCTATTGTATAACTTCAATGCTGATTTATTCTAGATTAGCACTAGGTTCAAAAGTATCCTCTAATTGTTTCAAATGAGTTTATCTGTTATGATGGGCCTCTCGAATTGTGGACTTTCGGAAAATCAATATTGGTGAGAGGAGAGCGTTTTGTAGAATTGTAGTCTAGCAGATCATGATGACACTGTAAATTTAGATGTGGAGATATTTTTGGTGTCGTACTACTTTCAGAT ] [+] EMBL AK105392 [ CGGCCCCCTCCCCTCCCCGCTCCCACCGCCTCCCGAATCCGGCCTCCAAATCTCGCCGGGATCCGCCGCGCGGCCGCACGGATTCGCCTCCCGGAGCCGCGGCTCTGTCGGCGCGGGGGCGGGAGAAGGGGGGCCTGCTCCGGCCCGGGGGACGCCGGATCTGGGTCGGGGGGTTTCTCTTCGGGCTCGGAGGAGGAAGGGCAAGTCACGGTGGCGTTAGTGGTGGTGGTGGTTGTTGCAGCGGCGGCGGTTGATTTGTGGGTGTGATTCGTGGGCTTCTTGGTGTCGGTGTGCCTGGTGCTGGTGACGCGCCATGGATTACAACCCCGTGGACAGCAGCGGAACTGATGATGATCTTCCACCGACATATCAGAACAGAGGTGTAAGAGGCAGTGGACGTGTTAGTGGTAATGGGAGAGATATTGTTAGCGCTGTTCCATATAATAGAACTAAGCCACAGACAGATATGGAAACACAAATTCATCAGCTTGAGCAAGATGCATATTGTTCTGTTCTTCGTGCATTTAAAGCACAATCTGATGCTATTTCATGGGAAAAGGAAGGTCTTATCACTGAACTTAGAAAGGAACTTAGAGTGTCTGACAAAGAGCACAGGGAGTTGTTAAACAGAGTGAACGGTGATGATATCATTCAAAGAATAAGGGAATGGAGAGAGACAAAAGGTGGGCTTCAGGCAGATATGGTGAATAATGCTCAACGTTCACATGATCGCGTGCCCAGCCCTACCACCTCCGCTCGCAAGAGGCAGAAGACGTCACAATCCATCCCTTCTGCTTCTGTACCTGTACCATCTCCTGCTGTGCATTCACAGACACTGACTGCCCCAATGCAACCATTGTCATCAGCAACAAAAAAAGTAGCTCCACCTGGTACAAAAGGCAAAAAGACTAAGCCAGGCCAGAAGATACCAGGTGGCTCTGCAATCAAGACCATGTCTTCTGCTGGCCCTAGTGGTAGGGGACCAATTATGAATAAGAACCTATCAGGTGGTCTTCCTACTGAACCAATATCAGTAAATCCATTAATCGGACGGAAGGTCATGACTCGGTGGCCTGATGATAATAGCTTTTATGAGGCTGTTATAACTGACTATGATCCACAGCTGGATCGTTATGCACTGGTTTATGACATAAATACAGCAGATGAAACCTGGGAGTGGGTTGACTTTAAAGAGATGGCACCTGAAGATATTAGATGGGAAGGTGGCGACCCTGGAATAATCCAGCAAGGCCGTGGCGCTACTGTTCATGGTGGTAAGAAGTCAAGCAGCCGTAATGGCCCCATGTCAGGTCCTGGAAGGGGGAGCAGAGGGCCGCAAAAGAACACATCCAGGAAAGAGTTTCCACCTTCACAAAATGGTGTTGGGAAGAAAAGCTCTGATTGCATAGAAATACTCCATACGGAGTCATTAATAAAGGAGGTGGAGCGGGTTTTCAGCGCAAGCAACCCTGATCCTCTTGAAATGGAGAAAGCAAAGAAAGTGCTCAAGGAGCATGAACAATCTTTGATTGATGCAATTGCAAGGCTTGCTGAGGCATCTGATGGCGAAAGT GAAGAAAGGGCACAACCCTTGCAACACAACCGTGGATGGAGAAACCATCATGGTGGAAACTATGCAAATGATATGACTATCGATGGTCACATGGTTGGAGATGCTGATGCCCTGTAAACAATTACTGAACTGTATACAGAACCCTTTTTTTATCTATTGTATAACTTCAATGCTGATTTATTCTAGATTAGCACTAGGTTCAAAAGTATCCTCTAATTGTTTCAAATGAGTTTATCTGTTATGATGGGCCTCTCGAATTGTGGACTTTCGGAAAATCAATATTGGTGAGAGGAGAGCGTTTTGTAGAATTGTAGTCTAGCAGATCATGATGACACTGTAAATTTAGATGTGGAGATATTTTTGGTGTCGTACTACTTTCAGATGTGACTACTCACTGGAGATGTATGTTGTTTTGTACTCGCTAGCAAGCAGAACACGCATTTTTTTTGTTTTTTTTTGCAATGTTTCTTTGAGCCATGGTTGATACTTTTTAGAAAGGGTAATTTGGAACCATGCCATTATAATTTTTCAAAGTTTGAGATATGCCATCGGTATCTCAAT] [+] EMBL CB665848 [ AAATCTCGCCGGGATCCGCCGCGCGGCCGCACGGATTCGCCTCCCGGAGCCGCGGCTCTGTCGGCGCGGGGGCGGGAGAAGGGGGGCCTGCTCCGGCCCGGGGGACGCCGGATCTGGGTCGGGGGGTTTCTCTTCGGGCTCGGAGGAGGAAGGGCAAGTCACGGTGGCGTTAGTGGTGGTGGTGGTTGTTGCAGCGGCGGCGGTTGATTTGTGGGTGTGATTCGTGGGCTTCTTGGTGTCGGTGTGCCTGGTGCTGGTGACGCGCCATGGATTACAACCCCGTGGACAGCAGCGGAACTGATGATGATCTTCCACCGACATATCAGAACAGAGGTGTAAGAGGCAGTGGACGTGTTAGTGGTAATGGGAGAGATATTGTTAGCGCTGTTCCATATAATAGAACTAAGCCACAGACAGATATGGAAACACAAATTCATCAGCTTGAGCAAGATGCATATTGTTCTGTTCTTCGTGCATTTAAAGCACAATCTGATGCTATTTCATGGGAAAAGGAAGGTCTTATCACTGAACTTAGAAAGGAACTTAGAGTGTCTGACAAAGAGCACAGGGAGTTGTTAAACAGAGTGAACGGTGATGATATCATTCAAAGAATAAGGGAATGGAGAGAGACAAAAGGTGGGCTTCAGGCAGATATGGTGAATAATGCTCAACGTTCACATGATCGCGTGCCCAGCCCTACCACCTCCGCTCGCAAGAGGCAGAAGACGTCACAATCCATCCCTTCTGCTTCTGTACCTGTACCATCTCCTGCTGTGCATTCACAGACA ] [+] EMBL CB632164 [ AGCCGCTGCTCTGTCGGCGCGGGGGCGGGAGAAGGGGGGCCTGCTCCGGCCCGGGGGACGCCGGATCTGGGTCGGGGGGTTTCTCTTCGGGCTCGGAGGAGGAAGGGCAAGTCACGGTGGCGTTAGTGGTGGTGGTGGTTGTTGCAGCGGCGGCGGTTGATTTGTGGGTGTGATTCGTGGGCTTCTTGGTGTCGGTGTGCCTGGTGCTGGTGACGCGCCATGGATTACAACCCCGTGGACAGCAGCGGAACTGATGATGATCTTCCACCGACATATCAGAACAGAGGTGTAAGAGGCAGTGGACGTGTTAGTGGTAATGGGAGAGATATTGTTAGCGCTGTTCCATATAATAGAACTAAGCCACAGACAGATATGGAAACACAAATTCATCAGCTTGAGCAAGATGCATATTGTTCTGTTCTTCGTGCATTTAAAGCACAATCTGATGCTATTTCATGGGAAAAGGAAGGTCTTATCACTGAACTTAGAAAGGAACTTAGAGTGTCTGACAAAGAGCACAGGGAGTTGTTAAACAGAGTGAACGGTGATGATATCATTCAAAGAATAAGGGAATGGAGAGAGACAAAAGGTGGGCTTCACGCAGATATGGTGAATAATGCTCAACGTTCACATGATCGCATGCCCAGCCCTACCACCTCCGCTCGCAAGAGGCAGAAGACGTCACAATCCATCCCTT ] [-] EMBL CB665849 [ ATGGGAAGGTGGCGACCCTGGAATAATCCAGCAAGGCCGTGGCGCTACTGTTCATGGTGGTAAGAAGTCAAGCAGCCGTAATGGCCCCATGTCAGGTCCTGGAAGGGGGAGCAGAGGGCCGCAAAAGAACACATCCAGGAAAGAGTTTCCACCTTCACAAAATGGTGTTGGGAAGAAAAGCTCTGATTGCATAGAAATACTCCATACGGAGTCATTAATAAAGGAGGTGGAGCGGGTTTTCAGCGCAAGCAACCCTGATCCTCTTGAAATGGAGAAAGCAAAGAAAGTGCTCAAGGAGCATGAACAATCTTTGATTGATGCAATTGCAAGGCTTGCTGAGGCATCTGATGGCGAAAGTGCAGAAGAAAGGGCACAACCCTTGCAACACAACCGTGGATGGAGAAACCATCATGGTGGAAACTATGCAAATGATATGACTATCGATGGTCACATGGTTGGAGATGCTGATGCCCTGTAAACAATTACTGAACTGTATACAGAACCCTTTTTTTATCTATTGTATAACTTCAATGCTGATTTATTCTAGATTAGCACTAGGTTCAAAAGTATCCTCTAATTGTTTCAAATGAGTTTATCTGTTATGATGGGCCTCTCGAATTGTGGACTTTCGGAAAATCAATATTGGTGAGAGGAGAGCGTTTTGTAGAATTGTAGTCTAGCAGATCATGATGACACTGTAAATTTAGATGTGGAGATATTTTTGGTGTCGTACTACTTTCAGATGTGAATGCTCACTGGAGATGTATGTTGTTTTGTACTCGC ] [-] EMBL CB632165 [ GTAAGAAGTCAAGCAGCCGTAATGGCCCCATGTCAGGTCCTGGAAGGGGGAGCAGAGGGCCGCAAAAGAACACATCCAGGAAAGAGTTTCCACCTTCACAAAATGGTGTTGGGAAGAAAAGCTCTGATTGCATAGAAATACTCCATACGGAGTCATTAATAAAGGAGGTGGAGCGGGTTTTCAGCGCAAGCAACCCTGATCCTCTTGAAATGGAGAAAGCAAAGAAAGTGCTCAAGGAGCATGAACAATCTTTGATTGATGCAATTGCAAGGCTTGCTGAGGCATCTGATGGCGAAAGT GAAGAAAGGGCACAACCCTTGCAACACACCCGTGGATGGAGAAACCATCATGGTGGAAACTATGCAAATGATATGACTATCGATGGTCACATGGTTGGAGATGCTGATGCCCTGTAAACAATTACTGAACTGTATACAGAACCCTTTTTTTATCTACTGTATAACTTCAATGCTGATTTATTTTAGATTAGCACTAGGTTCAAAAGTATCCTCTAATTGTTTCAAATGAGTTTATCTGTTATGATGGCCCTCTCGAATTGTGGACTTTCGGAAAATCAATATTGGTGAGAGGAGAGCGTTTTGTAGAATTGTAGTCTAGCAGATCATGATGCCCCTGTAAATTTAGATGTGGAGATATTTTTGGTGTCGTACTACTTTCAGATGTGACTACTCACTGGAGATGTATGTTGTTTTGTACTCG ] [-] EMBL C28553 [ TGAACTGTATACAGAACCCTTTTTTTATCTATTGTATAACTTCAATGCTGATTTATTCTAGATTAGCACTAGGTTCAAAAGTATCCTCTAATTGTTTCAAATGAGTTTATCTGTTATGATGGGCCTCTCGAATTGTGGACTTTCGGAAAATCAATATTGGTGAGAGGAGAGCGTTTTGTAGAATTGTAGTCTAGCAGATCATGATGACACTGTAAATTTAGATGTGGAGATATTTTTGGTGTCGTACTACTTTCAGATGTGACTACTCACTGGAGATGTATGTTGTTTTGTACTCGCTAGCAAGCAGAACACGCATTTTTTTT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||