cluster # 10312

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Oryza sativa
cluster # 10312 cluster # 10312 Sequences # 7 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10312#0 length = 2577 sequences # 6

consensus_10312#1 length = 778 sequences # 1

consensusID : consensus_10312#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2577
fasta sequence

                              [CCTCTGCTTCTCTTCTCCTCTCCTCTCCTCACCGGGAGAGTGGAGACCCTCGAGATGCCCGGCGGTCGCCGCGGCGGCGGCGGGCGTCCTGGCTCGGCAGCAGCAGCAACGGCGGAGGCTCCGGGTATAGTTGGGTTGAGAAGAAGTCGAAGAAATCGGAGAAATCAGTTGGAAAGGGACAATGCGCACCATGTACTTCTTCAAATGCTGCACCTAAACCTGCTATGGCGTGGCAAGCACGGAGTGGCAATGGATCTTTACACCCTCCTGGAAATGGTCGGGTTCAACATTCTGATCATAGGCCTGCTGCCAGAGGCAGTCCTAGGTCACTGCCACAAAATAAGCATACAGAAACAAAATTGCAAGCACCGTGTCCAGTTGTGACTGCACCTCTTGCAAATGGTTTGCAGTGGGTACCCAAGTCTCGCTCATCTGGTTCTGAGAGCAATATGGATGATGCTCCTACATCAGGTTCTGACCCTGAAATGGACAATGGTGCAACACACCCAGTTGTGACTGCAACTCTTGCAAATGGCTTGCAGTGGGTGCCCAGGTCTCGCTCATCTGACTCTCAAAGCAACAAGGATGATGCTCCTACAGCTAGTTCTGACCCTGAAACGGACAATGTTGCACCACACCCAGTTGTAAGTGCACCTGTTGCAAATGGCTTGCAGTGGGTACCCAGATCTCACTCATCTGGCTCTGAAATGGACAATGGTGAGGATTATGATTCATATGACGATGATTCTGATGATGATATGGTTGATGATACCAGTGGTGACTTTGATTCTAAGGCATCTGAGAAAAATTTTGAGACTCGAAAAAGGCACAAGCTGTTGAAAAGCATTTTTGAACTTCTGGAGAAGTTAAGTGTTGAACAGATAAATGAAAAGACTAGGCAATGGCATTGTCCAGCATGCAAAATGTACGTGGTGGAGTTACCTGGTACAAAGGGTTACAGCCTTTGATGAATCATGCTAGAACAAAGGGTTCTAAGAGGGTTAAGCTTCACAGAGAATTGGCTGCATTACTGGAAGAGGAGCTGTATCGTACGGGAATTTCAATGGCATCATCTGGCGAGTTCTTTGGAATCTGGAAAGGATTGCGAGAAAACACTGATCGTCCTATAGTATGGCCCCCAGTGGTTATTATTATGAACACTCGATTGGAACAAGATAAGGATGGCAAGTGGAAAGGTATGGGAAACAAAGAGCTCCTTAGTTATTTCAGTAAATATCACGTGAAGGAAGCATGCCATGCTTATGGCCCAGATGGGCACAGTGGCATGAGTGCGCTAATATTTGAAGGATCTGCCGTGGCCTATAAGGAGGCAGAACGGTTGCATAATCACTTTGTTGATCAAAGAACAGACAAGTATGCGTGGTTGAATCATAGGATCGTCATACCTGGTGGGAAAAGGCAACTGTATGGTTTCTTAGCTGAAAAAGAAGACCTGGAGGCGTTCAATAGACATCATGGAAAAGACTATTTGAAATACGAGATGAAATCTTATAACGAGATGGTGGTTACCCAATTGAAGCAGATGAGTGAAGACAACCAACAACTGAATTATGTGAAGAATGAGATGGTTAAGACAGAGCGACATTCTAAAGAAGTAGAAGAAGCCTTGGGTGTTGAGACCCAGAAACTTCAGGGAGCAATTGAAGATAATATTATTTTGAAGAGAAAAACCAAGGAGATGCTCTCAGAGTGCGTGGAACAGATGGAGTTTAATGCGAAATTTTATCATGAACAAATTGAAAGACTTCGCAAGGACACCGAGGAGAAAGAGAATGAGTTTGAGAGGTTGCTGCAGGAGGAGCTAGCAAGAGCTATAGAGTGTGATGTTGACTCTGAAACTACAGAAAATTGCAAGCTAAGGGAGGAACAGATA--CAAAGAATCATAGATTGCCAGGTGAAGGATGCGGAGGAGTTTGATGCTGAACAAGATGAATTGATCAAAACACACGAAGAGAAGAAGGCGAACGTCAAGATGGAGTATATGGCAAAGGATGTTGAGCTCGAGGAGGAGCTTTATGCCGCTCTCACAAGTCTGATGGAGAAACACAAGCCGGACATCTTCCAACCGTCCAGCCCTTGAAGAGCTGCAGGCTTGCAGCCCACCATATATATG-CCCTGCTCACAATAATCTCAAGAGGCCCCTCTCCCAAATGAACTTCAATTT-ACATGCCGATAAATTGCTTGAACTGCTCAGAAACTCTCCTGAGTCGCGTCTCTGGGCAATTGTGTTGCACCCGCAATTTGGTGTTTCGATCTGCAATTTTTATGCATCTGCAAA-GGTCAATTTGATTGAGTTGACA-AGAATACCTGTTGCTGAACTCAAAGATGATGTGCTATTCTTGTCAAACATATAACTCTACA-CGGTTTTGATTTCACTTGCAAGTTTGTGAAAATAAAAGTAAAACAGATGGTTTTACTTTGCA-AG-TAAAAGAATTTCGGAACTGCCAAGTCCGTCCCTA-A-TATTTCTAGAGATTCAGAAACATCACATGTTTTTGGGTTACTGCAAGCATGGTTTGAAGTTTGGACTTCAAAGGTGGAATGAAAAATCTGTTCGAT]

[+] EMBL AK100699             [CCTCTGCTTCTCTTCTCCTCTCCTCTCCTCACCGGGAGAGTGGAGACCCTCGAGATGCCCGGCGGTCGCCGCGGCGGCGGCGGGCGTCCTGGCTCGGCAGCAGCAGCAACGGCGGAGGCTCCGGGTATAGTTGGGTTGAGAAGAAGTCGAAGAAATCGGAGAAATCAGTTGGAAAGGGACAATGCGCACCATGTACTTCTTCAAATGCTGCACCTAAACCTGCTATGGCGTGGCAAGCACGGAGTGGCAATGGATCTTTACACCCTCCTGGAAATGGTCGGGTTCAACATTCTGATCATAGGCCTGCTGCCAGAGGCAGTCCTAGGTCACTGCCACAAAATAAGCATACAGAAACAAAATTGCAAGCACCGTGTCCAGTTGTGACTGCACCTCTTGCAAATGGTTTGCAGTGGGTACCCAAGTCTCGCTCATCTGGTTCTGAGAGCAATATGGATGATGCTCCTACATCAGGTTCTGACCCTGAAATGGACAATGGTGCAACACACCCAGTTGTGACTGCAACTCTTGCAAATGGCTTGCAGTGGGTGCCCAGGTCTCGCTCATCTGACTCTCAAAGCAACAAGGATGATGCTCCTACAGCTAGTTCTGACCCTGAAACGGACAATGTTGCACCACACCCAGTTGTAAGTGCACCTGTTGCAAATGGCTTGCAGTGGGTACCCAGATCTCACTCATCTGGCTCTGAAATGGACAATGGTGAGGATTATGATTCATATGACGATGATTCTGATGATGATATGGTTGATGATACCAGTGGTGACTTTGATTCTAAGGCATCTGAGAAAAATTTTGAGACTCGAAAAAGGCACAAGCTGTTGAAAAGCATTTTTGAACTTCTGGAGAAGTTAAGTGTTGAACAGATAAATGAAAAGACTAGGCAATGGCATTGTCCAGCATGCAAAATGTACGTGGTGGAGTTACCTGGTACAAAGGGTTACAGCCTTTGATGAATCATGCTAGAACAAAGGGTTCTAAGAGGGTTAAGCTTCACAGAGAATTGGCTGCATTACTGGAAGAGGAGCTGTATCGTACGGGAATTTCAATGGCATCATCTGGCGAGTTCTTTGGAATCTGGAAAGGATTGCGAGAAAACACTGATCGTCCTATAGTATGGCCCCCAGTGGTTATTATTATGAACACTCGATTGGAACAAGATAAGGATGGCAAGTGGAAAGGTATGGGAAACAAAGAGCTCCTTAGTTATTTCAGTAAATATCACGTGAAGGAAGCATGCCATGCTTATGGCCCAGATGGGCACAGTGGCATGAGTGCGCTAATATTTGAAGGATCTGCCGTGGCCTATAAGGAGGCAGAACGGTTGCATAATCACTTTGTTGATCAAAGAACAGACAAGTATGCGTGGTTGAATCATAGGATCGTCATACCTGGTGGGAAAAGGCAACTGTATGGTTTCTTAGCTGAAAAAGAAGACCTGGAGGCGTTCAATAGACATCATGGAAAAGACTATTTGAAATACGAGATGAAATCTTATAACGAGATGGTGGTTACCCAATTGAAGCAGATGAGTGAAGACAACCAACAACTGAATTATGTGAAGAATGAGATGGTTAAGACAGAGCGACATTCTAAAGAAGTAGAAGAAGCCTTGGGTGTTGAGACCCAGAAACTTCAGGGAGCAATTGAAGATAATATTATTTTGAAGAGAAAAACCAAGGAGATGCTCTCAGAGTGCGTGGAACAGATGGAGTTTAATGCGAAATTTTATCATGAACAAATTGAAAGACTTCGCAAGGACACCGAGGAGAAAGAGAATGAGTTTGAGAGGTTGCTGCAGGAGGAGCTAGCAAGAGCTATAGAGTGTGATGTTGACTCTGAAACTACAGAAAATTGCAAGCTAAGGGAGGAACAGATA  CAAAGAATCATAGATTGCCAGGTGAAGGATGCGGAGGAGTTTGATGCTGAACAAGATGAATTGATCAAAACACACGAAGAGAAGAAGGCGAACGTCAAGATGGAGTATATGGCAAAGGATGTTGAGCTCGAGGAGGAGCTTTATGCCGCTCTCACAAGTCTGATGGAGAAACACAAGCCGGACATCTTCCAACCGTCCAGCCCTTGAAGAGCTGCAGGCTTGCAGCTCACCATATATATG CCCTGCTCACAATAATCTCAAGAGGTCCCTCTCCCAAATGAACTTCAATTT ACATGCCGATAAATTGCTTGAAATGCTCAGAAACTCTCCCGAGTGGCGTCTCTGGGCAATTGTGTTGCACCCCCAATTTGGTGTTTTGATCTGCAATTTTTATGCATCTGCAAA GGTCAATTTGATTGAGTTGACA AGAATACCTGTTGCTCAACTCAAAGATGATGTGCTATTCTTGTCAAACATATAACTCTACA CGGTTTTGATTTCACTTGCAAGTTTGTGAAAATAAAAGTAAAACAGATGGTTTTACTTTGCA AG TAAAAGAATTTCGGAACTGCCAAGTCCGTCCCTA A TATTTCTAGAGATTCAGAAACATCACATGTTTTTGGGTTACTGCAAGCATGGTTTGAAGTTTGGACTTCA                          ]
[+] EMBL C25831               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ntnGTTGANTCATAGGATCGTNATACCTGGTGGGAAAAGGCAACTNTATGGTTTCTTAGCTGAAAAAGAAGACCTGGAGGCGTTCAATAGACATCATGGAAAAGACTATTTGAAATACGAGATGAAATCTTATAACGAGATGGTGGTTACCCAATTGAAGCAGATNAGTGAAGACAACCAACAACTGANTTATGTNAAGANTGAGATGGTTAAGACAGAGCGACATTCTAAAGANGTAGAAGAAGCCTTNGGTGTTGAGACCCAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BI812267             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         acCTCTGGAACTACAGGAAATTCCACTCTAAGGGAG  ACAGATACCCAAGGAATCATAGATTTCACGGTGAAGGAT CGGAGGAGTTTGATGCTGAACAAGATGAATTGATCAAAGCACACGAAGAGAAGAA GCGAACGTCAAGATGGAGTATAT GCAAAGGATGTTGAGCTCGAGGAGGAGCTTTATGCCGCTCTCACAAGTCTGATGGAGAAACACAAGCCGGACATCTTCCAACCGTCCAGCCCTTGAAGAGCTGCAGGCTTGCAGCCCACCATATATATGCCCCTGCTCACAATAATCTCAAGAGGCCCCTCTCCCAAATGAACTTCAATTTGACATGCCGATAAATTGCTTGAACTGCTCAGAAACTCTCCTGAGTCGCGTCTCTGGGCAATTGTGTTGCACCCGCAATTTGGTGTTTCGATCTGCAATTTTTATGCATCTGCAAACGGTC ATTTGATTGAGTTGACACAGAATACCTGTTGCTGAACTCAAAGATGATATGCTATTCTTGTCAAACATATAACTCTACACCGGTTTTGATTTCACTTGCAAGTTTGTGAAAATAAAAGTAAAACAGATGGTTTTACTTTGCACAGCTAAAAAAAaaa                                                                                                                          ]
[-] EMBL CB629457             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          gGGGCATTTTCCATCCGTCCAGCCCTTGAAGAGCTGCAGGCTTGCAGCCCGCCATATATATG CCCTGCTCACAATAATCTCAAGAGGCCCCTCTCCCAAATGAACTTCAATTT ACATGCCGATAAATTGCTTGAACTGCTCAGAAACTTTCCTGAGTCGCGTATATGGGCAATTGTGTTGCACCCGCAATTTGGTGTTTCGATCTGCAATTTTTATGCATCTGCAAA GGTCAATTTGATTGAGTTGACA AGAATACCTGTTGCTGAACTCAAAGATGATATGCTATTCTTGTCAAACATATAACTCTACA CGGTTTTGATTTCACTTGCAAGTTTGTGAAAATAAAAGTAAAACAGATGGTTTTACTTTGCA AG TAAAATAATTTTGAAACTG CAAGTAAGTCCCTAGAGTATTTCTAGAGATTCAGAAACATCCCTTGTTTTTGGGTTACTGCAAGCATGGTTTGAAGTTTGGACTTCAAAGGTGGAATGAAAAATCTGTTCGAT]
[+] EMBL CA754140             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AAGATGATGTGCTATTCTTGTCAAACATATAACTCTACA CGGTTTTGATTTCACTTGCAAGTTTGTGAAAATAAAAGTAAAACAGATGGTTTTACTTTGCA AG TAAAAGAATTTCGGAACTGCCAAGTCCGTCCCTA A TAaaaaaaaa                                                                                      ]
[+] EMBL CA754139             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AAGATGATGTGCTATTCTTGTCAAACATATAACTCTACA CGGTTTTGATTTCACTTGCAAGTTTGTGAAAATAAAAGTAAAACAGATGGTTTTACTTTGCA AG TAAAAGAATTTCGGAACTGCCAAGTCCGTCCCTA A TAaaaaaaaa                                                                                      ]




>consensus_10312#0
CCTCTGCTTCTCTTCTCCTCTCCTCTCCTCACCGGGAGAGTGGAGACCCTCGAGATGCCC
GGCGGTCGCCGCGGCGGCGGCGGGCGTCCTGGCTCGGCAGCAGCAGCAACGGCGGAGGCT
CCGGGTATAGTTGGGTTGAGAAGAAGTCGAAGAAATCGGAGAAATCAGTTGGAAAGGGAC
AATGCGCACCATGTACTTCTTCAAATGCTGCACCTAAACCTGCTATGGCGTGGCAAGCAC
GGAGTGGCAATGGATCTTTACACCCTCCTGGAAATGGTCGGGTTCAACATTCTGATCATA
GGCCTGCTGCCAGAGGCAGTCCTAGGTCACTGCCACAAAATAAGCATACAGAAACAAAAT
TGCAAGCACCGTGTCCAGTTGTGACTGCACCTCTTGCAAATGGTTTGCAGTGGGTACCCA
AGTCTCGCTCATCTGGTTCTGAGAGCAATATGGATGATGCTCCTACATCAGGTTCTGACC
CTGAAATGGACAATGGTGCAACACACCCAGTTGTGACTGCAACTCTTGCAAATGGCTTGC
AGTGGGTGCCCAGGTCTCGCTCATCTGACTCTCAAAGCAACAAGGATGATGCTCCTACAG
CTAGTTCTGACCCTGAAACGGACAATGTTGCACCACACCCAGTTGTAAGTGCACCTGTTG
CAAATGGCTTGCAGTGGGTACCCAGATCTCACTCATCTGGCTCTGAAATGGACAATGGTG
AGGATTATGATTCATATGACGATGATTCTGATGATGATATGGTTGATGATACCAGTGGTG
ACTTTGATTCTAAGGCATCTGAGAAAAATTTTGAGACTCGAAAAAGGCACAAGCTGTTGA
AAAGCATTTTTGAACTTCTGGAGAAGTTAAGTGTTGAACAGATAAATGAAAAGACTAGGC
AATGGCATTGTCCAGCATGCAAAATGTACGTGGTGGAGTTACCTGGTACAAAGGGTTACA
GCCTTTGATGAATCATGCTAGAACAAAGGGTTCTAAGAGGGTTAAGCTTCACAGAGAATT
GGCTGCATTACTGGAAGAGGAGCTGTATCGTACGGGAATTTCAATGGCATCATCTGGCGA
GTTCTTTGGAATCTGGAAAGGATTGCGAGAAAACACTGATCGTCCTATAGTATGGCCCCC
AGTGGTTATTATTATGAACACTCGATTGGAACAAGATAAGGATGGCAAGTGGAAAGGTAT
GGGAAACAAAGAGCTCCTTAGTTATTTCAGTAAATATCACGTGAAGGAAGCATGCCATGC
TTATGGCCCAGATGGGCACAGTGGCATGAGTGCGCTAATATTTGAAGGATCTGCCGTGGC
CTATAAGGAGGCAGAACGGTTGCATAATCACTTTGTTGATCAAAGAACAGACAAGTATGC
GTGGTTGAATCATAGGATCGTCATACCTGGTGGGAAAAGGCAACTGTATGGTTTCTTAGC
TGAAAAAGAAGACCTGGAGGCGTTCAATAGACATCATGGAAAAGACTATTTGAAATACGA
GATGAAATCTTATAACGAGATGGTGGTTACCCAATTGAAGCAGATGAGTGAAGACAACCA
ACAACTGAATTATGTGAAGAATGAGATGGTTAAGACAGAGCGACATTCTAAAGAAGTAGA
AGAAGCCTTGGGTGTTGAGACCCAGAAACTTCAGGGAGCAATTGAAGATAATATTATTTT
GAAGAGAAAAACCAAGGAGATGCTCTCAGAGTGCGTGGAACAGATGGAGTTTAATGCGAA
ATTTTATCATGAACAAATTGAAAGACTTCGCAAGGACACCGAGGAGAAAGAGAATGAGTT
TGAGAGGTTGCTGCAGGAGGAGCTAGCAAGAGCTATAGAGTGTGATGTTGACTCTGAAAC
TACAGAAAATTGCAAGCTAAGGGAGGAACAGATACAAAGAATCATAGATTGCCAGGTGAA
GGATGCGGAGGAGTTTGATGCTGAACAAGATGAATTGATCAAAACACACGAAGAGAAGAA
GGCGAACGTCAAGATGGAGTATATGGCAAAGGATGTTGAGCTCGAGGAGGAGCTTTATGC
CGCTCTCACAAGTCTGATGGAGAAACACAAGCCGGACATCTTCCAACCGTCCAGCCCTTG
AAGAGCTGCAGGCTTGCAGCCCACCATATATATGCCCTGCTCACAATAATCTCAAGAGGC
CCCTCTCCCAAATGAACTTCAATTTACATGCCGATAAATTGCTTGAACTGCTCAGAAACT
CTCCTGAGTCGCGTCTCTGGGCAATTGTGTTGCACCCGCAATTTGGTGTTTCGATCTGCA
ATTTTTATGCATCTGCAAAGGTCAATTTGATTGAGTTGACAAGAATACCTGTTGCTGAAC
TCAAAGATGATGTGCTATTCTTGTCAAACATATAACTCTACACGGTTTTGATTTCACTTG
CAAGTTTGTGAAAATAAAAGTAAAACAGATGGTTTTACTTTGCAAGTAAAAGAATTTCGG
AACTGCCAAGTCCGTCCCTAATATTTCTAGAGATTCAGAAACATCACATGTTTTTGGGTT
ACTGCAAGCATGGTTTGAAGTTTGGACTTCAAAGGTGGAATGAAAAATCTGTTCGAT

consensusID : consensus_10312#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 778
fasta sequence

                              [TCTCTCCTCCTCACCGGGAGAGCGGAGACCCTCGAGATGCCCGGCGATCGCCGCGGCGGCGGCGGCGGCGGGCGTCCTGGCTCCGGCAGCAGCAGCAACGGCGGAGGCTCCGGGTATAGTTGGGTTCAGAAGAAGTCGAAGAAATCGGAGAAATCAGTTGGGAAGGGACAATGCACACCATGTACTTCTTCAAATGCTGCACCTAAACCTGCTACAGCGTGGCAAGCACGGAGTGGCAATGGATCTTTACACCCTCCTGAAAATGGTCGGGTTCAACATTCTGATCATAGGCCTGCTGCCAGAGGCAGTCCTAGGTCACTGCCACAAAATAAGCATACAGAAACAAAATTGCAAGCACCGTGTCCAGTTATGACTGCACCTCTTGCAAATGGCTTGCAGTGGGTACCCAAGTCTCGCTCATCTAGCTCTGAGAGGGATGATGCCCCTACATCTGGTTCTGACCCTGAAATGGACAATGGTGCACCCTGCCCAGTTGTAACTGCACCTGTTGCAAATGGCTTGCAGTGGGTACCCAGATCTCACTCATCTGGCTCTGAAAGCAATAAGAATGATGCTCCTACATCTGGTTCTGACCCTGAAATGGACAATGGTGAAGATTATGATTCATATGACGATGATTCTGATGATGATATGGTTGATGATACCAGTGGTGACTTTGATTCTAAGGCAGCTGAGAAAAATTTTGAGACTCGAAAAAGGCACAAGCTGTTGAAAAGCATTTTTGAACTTCTGGAGAAAGTAAGTGTTGAACAGATAA]

[+] EMBL CB629456             [TCTCTCCTCCTCACCGGGAGAGCGGAGACCCTCGAGATGCCCGGCGATCGCCGCGGCGGCGGCGGCGGCGGGCGTCCTGGCTCCGGCAGCAGCAGCAACGGCGGAGGCTCCGGGTATAGTTGGGTTCAGAAGAAGTCGAAGAAATCGGAGAAATCAGTTGGGAAGGGACAATGCACACCATGTACTTCTTCAAATGCTGCACCTAAACCTGCTACAGCGTGGCAAGCACGGAGTGGCAATGGATCTTTACACCCTCCTGAAAATGGTCGGGTTCAACATTCTGATCATAGGCCTGCTGCCAGAGGCAGTCCTAGGTCACTGCCACAAAATAAGCATACAGAAACAAAATTGCAAGCACCGTGTCCAGTTATGACTGCACCTCTTGCAAATGGCTTGCAGTGGGTACCCAAGTCTCGCTCATCTAGCTCTGAGAGGGATGATGCCCCTACATCTGGTTCTGACCCTGAAATGGACAATGGTGCACCCTGCCCAGTTGTAACTGCACCTGTTGCAAATGGCTTGCAGTGGGTACCCAGATCTCACTCATCTGGCTCTGAAAGCAATAAGAATGATGCTCCTACATCTGGTTCTGACCCTGAAATGGACAATGGTGAAGATTATGATTCATATGACGATGATTCTGATGATGATATGGTTGATGATACCAGTGGTGACTTTGATTCTAAGGCAGCTGAGAAAAATTTTGAGACTCGAAAAAGGCACAAGCTGTTGAAAAGCATTTTTGAACTTCTGGAGAAAGTAAGTGTTGAACAGATAA]




>consensus_10312#1
TCTCTCCTCCTCACCGGGAGAGCGGAGACCCTCGAGATGCCCGGCGATCGCCGCGGCGGC
GGCGGCGGCGGGCGTCCTGGCTCCGGCAGCAGCAGCAACGGCGGAGGCTCCGGGTATAGT
TGGGTTCAGAAGAAGTCGAAGAAATCGGAGAAATCAGTTGGGAAGGGACAATGCACACCA
TGTACTTCTTCAAATGCTGCACCTAAACCTGCTACAGCGTGGCAAGCACGGAGTGGCAAT
GGATCTTTACACCCTCCTGAAAATGGTCGGGTTCAACATTCTGATCATAGGCCTGCTGCC
AGAGGCAGTCCTAGGTCACTGCCACAAAATAAGCATACAGAAACAAAATTGCAAGCACCG
TGTCCAGTTATGACTGCACCTCTTGCAAATGGCTTGCAGTGGGTACCCAAGTCTCGCTCA
TCTAGCTCTGAGAGGGATGATGCCCCTACATCTGGTTCTGACCCTGAAATGGACAATGGT
GCACCCTGCCCAGTTGTAACTGCACCTGTTGCAAATGGCTTGCAGTGGGTACCCAGATCT
CACTCATCTGGCTCTGAAAGCAATAAGAATGATGCTCCTACATCTGGTTCTGACCCTGAA
ATGGACAATGGTGAAGATTATGATTCATATGACGATGATTCTGATGATGATATGGTTGAT
GATACCAGTGGTGACTTTGATTCTAAGGCAGCTGAGAAAAATTTTGAGACTCGAAAAAGG
CACAAGCTGTTGAAAAGCATTTTTGAACTTCTGGAGAAAGTAAGTGTTGAACAGATAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10312#0      CCTCTGCTTCTCTTCTCCTCTCCTCTCCTCACCGGGAGAGTGGAGACCCTCGAGATGCCC 60
consensus_10312#1      ------------------TCTCTCCTCCTCACCGGGAGAGCGGAGACCCTCGAGATGCCC 42
                                         ****  **************** *******************

consensus_10312#0      GGCGGTCGCCGCGGCGGCGGCGG------GCGTCCTGGCTC-GGCAGCAGCAGCAACGGC 113
consensus_10312#1      GGCGATCGCCGCGGCGGCGGCGGCGGCGGGCGTCCTGGCTCCGGCAGCAGCAGCAACGGC 102
                       **** ******************      ************ ******************

consensus_10312#0      GGAGGCTCCGGGTATAGTTGGGTTGAGAAGAAGTCGAAGAAATCGGAGAAATCAGTTGGA 173
consensus_10312#1      GGAGGCTCCGGGTATAGTTGGGTTCAGAAGAAGTCGAAGAAATCGGAGAAATCAGTTGGG 162
                       ************************ ********************************** 

consensus_10312#0      AAGGGACAATGCGCACCATGTACTTCTTCAAATGCTGCACCTAAACCTGCTATGGCGTGG 233
consensus_10312#1      AAGGGACAATGCACACCATGTACTTCTTCAAATGCTGCACCTAAACCTGCTACAGCGTGG 222
                       ************ ***************************************  ******

consensus_10312#0      CAAGCACGGAGTGGCAATGGATCTTTACACCCTCCTGGAAATGGTCGGGTTCAACATTCT 293
consensus_10312#1      CAAGCACGGAGTGGCAATGGATCTTTACACCCTCCTGAAAATGGTCGGGTTCAACATTCT 282
                       ************************************* **********************

consensus_10312#0      GATCATAGGCCTGCTGCCAGAGGCAGTCCTAGGTCACTGCCACAAAATAAGCATACAGAA 353
consensus_10312#1      GATCATAGGCCTGCTGCCAGAGGCAGTCCTAGGTCACTGCCACAAAATAAGCATACAGAA 342
                       ************************************************************

consensus_10312#0      ACAAAATTGCAAGCACCGTGTCCAGTTGTGACTGCACCTCTTGCAAATGGTTTGCAGTGG 413
consensus_10312#1      ACAAAATTGCAAGCACCGTGTCCAGTTATGACTGCACCTCTTGCAAATGGCTTGCAGTGG 402
                       *************************** ********************** *********

consensus_10312#0      GTACCCAAGTCTCGCTCATCTGGTTCTGAGAGCAATATGGATGATGCTCCTACATCAGGT 473
consensus_10312#1      GTACCCAAGTCTCGCTCATCTAGCTCTGAGAG------GGATGATGCCCCTACATCTGGT 456
                       ********************* * ********      ********* ******** ***

consensus_10312#0      TCTGACCCTGAAATGGACAATGGTGCAACACACCCAGTTGTGACTGCAACTCTTGCAAAT 533
consensus_10312#1      TCTGACCCTGAAATGGACAATGGTGCACCCTGCCCAGTTGTAACTGCACCTGTTGCAAAT 516
                       *************************** *   ********* ****** ** ********

consensus_10312#0      GGCTTGCAGTGGGTGCCCAGGTCTCGCTCATCTGACTCTCAAAGCAACAAGGATGATGCT 593
consensus_10312#1      GGCTTGCAGTGGGTACCCAGATCTCACTCATCTGGCTCTGAAAGCAATAAGAATGATGCT 576
                       ************** ***** **** ******** **** ******* *** ********

consensus_10312#0      CCTACAGCTAGTTCTGACCCTGAAACGGACAATGTTGCACCACACCCAGTTGTAAGTGCA 653
consensus_10312#1      CCTACATCTGGTTCTGACCCTGAAA----------------------------------- 601
                       ****** ** ***************                                   

consensus_10312#0      CCTGTTGCAAATGGCTTGCAGTGGGTACCCAGATCTCACTCATCTGGCTCTGAAATGGAC 713
consensus_10312#1      -------------------------------------------------------TGGAC 606
                                                                              *****

consensus_10312#0      AATGGTGAGGATTATGATTCATATGACGATGATTCTGATGATGATATGGTTGATGATACC 773
consensus_10312#1      AATGGTGAAGATTATGATTCATATGACGATGATTCTGATGATGATATGGTTGATGATACC 666
                       ******** ***************************************************

consensus_10312#0      AGTGGTGACTTTGATTCTAAGGCATCTGAGAAAAATTTTGAGACTCGAAAAAGGCACAAG 833
consensus_10312#1      AGTGGTGACTTTGATTCTAAGGCAGCTGAGAAAAATTTTGAGACTCGAAAAAGGCACAAG 726
                       ************************ ***********************************

consensus_10312#0      CTGTTGAAAAGCATTTTTGAACTTCTGGAGAAGTTAAGTGTTGAACAGATAAATGAAAAG 893
consensus_10312#1      CTGTTGAAAAGCATTTTTGAACTTCTGGAGAAAGTAAGTGTTGAACAGATAA-------- 778
                       ********************************  ******************        

consensus_10312#0      ACTAGGCAATGGCATTGTCCAGCATGCAAAATGTACGTGGTGGAGTTACCTGGTACAAAG 953
consensus_10312#1      ------------------------------------------------------------
                                                                                   

consensus_10312#0      GGTTACAGCCTTTGATGAATCATGCTAGAACAAAGGGTTCTAAGAGGGTTAAGCTTCACA 1013
consensus_10312#1      ------------------------------------------------------------
                                                                                   

consensus_10312#0      GAGAATTGGCTGCATTACTGGAAGAGGAGCTGTATCGTACGGGAATTTCAATGGCATCAT 1073
consensus_10312#1      ------------------------------------------------------------
                                                                                   

consensus_10312#0      CTGGCGAGTTCTTTGGAATCTGGAAAGGATTGCGAGAAAACACTGATCGTCCTATAGTAT 1133
consensus_10312#1      ------------------------------------------------------------
                                                                                   

consensus_10312#0      GGCCCCCAGTGGTTATTATTATGAACACTCGATTGGAACAAGATAAGGATGGCAAGTGGA 1193
consensus_10312#1      ------------------------------------------------------------
                                                                                   

consensus_10312#0      AAGGTATGGGAAACAAAGAGCTCCTTAGTTATTTCAGTAAATATCACGTGAAGGAAGCAT 1253
consensus_10312#1      ------------------------------------------------------------
                                                                                   

consensus_10312#0      GCCATGCTTATGGCCCAGATGGGCACAGTGGCATGAGTGCGCTAATATTTGAAGGATCTG 1313
consensus_10312#1      ------------------------------------------------------------
                                                                                   

consensus_10312#0      CCGTGGCCTATAAGGAGGCAGAACGGTTGCATAATCACTTTGTTGATCAAAGAACAGACA 1373
consensus_10312#1      ------------------------------------------------------------
                                                                                   

consensus_10312#0      AGTATGCGTGGTTGAATCATAGGATCGTCATACCTGGTGGGAAAAGGCAACTGTATGGTT 1433
consensus_10312#1      ------------------------------------------------------------
                                                                                   

consensus_10312#0      TCTTAGCTGAAAAAGAAGACCTGGAGGCGTTCAATAGACATCATGGAAAAGACTATTTGA 1493
consensus_10312#1      ------------------------------------------------------------
                                                                                   

consensus_10312#0      AATACGAGATGAAATCTTATAACGAGATGGTGGTTACCCAATTGAAGCAGATGAGTGAAG 1553
consensus_10312#1      ------------------------------------------------------------
                                                                                   

consensus_10312#0      ACAACCAACAACTGAATTATGTGAAGAATGAGATGGTTAAGACAGAGCGACATTCTAAAG 1613
consensus_10312#1      ------------------------------------------------------------
                                                                                   

consensus_10312#0      AAGTAGAAGAAGCCTTGGGTGTTGAGACCCAGAAACTTCAGGGAGCAATTGAAGATAATA 1673
consensus_10312#1      ------------------------------------------------------------
                                                                                   

consensus_10312#0      TTATTTTGAAGAGAAAAACCAAGGAGATGCTCTCAGAGTGCGTGGAACAGATGGAGTTTA 1733
consensus_10312#1      ------------------------------------------------------------
                                                                                   

consensus_10312#0      ATGCGAAATTTTATCATGAACAAATTGAAAGACTTCGCAAGGACACCGAGGAGAAAGAGA 1793
consensus_10312#1      ------------------------------------------------------------
                                                                                   

consensus_10312#0      ATGAGTTTGAGAGGTTGCTGCAGGAGGAGCTAGCAAGAGCTATAGAGTGTGATGTTGACT 1853
consensus_10312#1      ------------------------------------------------------------
                                                                                   

consensus_10312#0      CTGAAACTACAGAAAATTGCAAGCTAAGGGAGGAACAGATACAAAGAATCATAGATTGCC 1913
consensus_10312#1      ------------------------------------------------------------
                                                                                   

consensus_10312#0      AGGTGAAGGATGCGGAGGAGTTTGATGCTGAACAAGATGAATTGATCAAAACACACGAAG 1973
consensus_10312#1      ------------------------------------------------------------
                                                                                   

consensus_10312#0      AGAAGAAGGCGAACGTCAAGATGGAGTATATGGCAAAGGATGTTGAGCTCGAGGAGGAGC 2033
consensus_10312#1      ------------------------------------------------------------
                                                                                   

consensus_10312#0      TTTATGCCGCTCTCACAAGTCTGATGGAGAAACACAAGCCGGACATCTTCCAACCGTCCA 2093
consensus_10312#1      ------------------------------------------------------------
                                                                                   

consensus_10312#0      GCCCTTGAAGAGCTGCAGGCTTGCAGCCCACCATATATATGCCCTGCTCACAATAATCTC 2153
consensus_10312#1      ------------------------------------------------------------
                                                                                   

consensus_10312#0      AAGAGGCCCCTCTCCCAAATGAACTTCAATTTACATGCCGATAAATTGCTTGAACTGCTC 2213
consensus_10312#1      ------------------------------------------------------------
                                                                                   

consensus_10312#0      AGAAACTCTCCTGAGTCGCGTCTCTGGGCAATTGTGTTGCACCCGCAATTTGGTGTTTCG 2273
consensus_10312#1      ------------------------------------------------------------
                                                                                   

consensus_10312#0      ATCTGCAATTTTTATGCATCTGCAAAGGTCAATTTGATTGAGTTGACAAGAATACCTGTT 2333
consensus_10312#1      ------------------------------------------------------------
                                                                                   

consensus_10312#0      GCTGAACTCAAAGATGATGTGCTATTCTTGTCAAACATATAACTCTACACGGTTTTGATT 2393
consensus_10312#1      ------------------------------------------------------------
                                                                                   

consensus_10312#0      TCACTTGCAAGTTTGTGAAAATAAAAGTAAAACAGATGGTTTTACTTTGCAAGTAAAAGA 2453
consensus_10312#1      ------------------------------------------------------------
                                                                                   

consensus_10312#0      ATTTCGGAACTGCCAAGTCCGTCCCTAATATTTCTAGAGATTCAGAAACATCACATGTTT 2513
consensus_10312#1      ------------------------------------------------------------
                                                                                   

consensus_10312#0      TTGGGTTACTGCAAGCATGGTTTGAAGTTTGGACTTCAAAGGTGGAATGAAAAATCTGTT 2573
consensus_10312#1      ------------------------------------------------------------
                                                                                   

consensus_10312#0      CGAT 2577
consensus_10312#1      ----