cluster # 10340

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Oryza sativa
cluster # 10340 cluster # 10340 Sequences # 7 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10340#0 length = 2461 sequences # 1
consensus_10340#1 length = 2281 sequences # 2

consensus_10340#2 length = 1757 sequences # 3
consensus_10340#3 length = 190 sequences # 1

consensusID : consensus_10340#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2461
fasta sequence

                              [CTCTCCTCCTCCCCGCACCGCCGCATCCCTTTCTTTCCCCCACCCCTTCCCGCTACGACAAACCATAGCATATCCTCGTCTCAACACTCTCCTCTGCCTGATCAAAAAAGAAAATCAAATGCGGTGAGATCTGCGGGGTCGTGATCCTCAAACCATTTGGCTCTGGTAACTGCAACTGCAAAACGGCACAGCCATGGAGCAGTACGAGGTACTGGAGCAGATCGGCAAAGGAGCATTTGGTTCTGCCCTGCTTGTCAGGCACAAGGTGGAGAAGAAGAAGTATGTGTTGAAAAAGATCCGGCTTGCCAGGCAGACAGACCGCACTCGCAGGTCTGCTCACCAGGAGATGCAGCTCATTGCCACAGTGAGGAACCCATTCATCGTGGAGTACAAGGATTCATGGGTGGAGAAGGGTTGCTATGTTTGCATCATTATAGGATACTGTGAAGGAGGAGACATGGCTGAAGCTATTAAAAGAGCTACAGGTGATCATTTCTCTGAGGAGAAGCTTTGCAAGTGGCTTGTGCAGCTCCTCATGGCCCTTGACTATTTGCATGCAAATCACATTCTTCACCGTGATGTGAAGGGATCAAAGTATAAGACTAGGTGACTTTGGGCTTGCAAAAATATTGACCTCTGATGATCTAGCATCCTCTGTGGTAGGAACACCAAGTTATATGTGCCCAGAACTACTTGCTGATATACCTTATGGTACCAAATCTGATATTTGGTCACTAGGATGTTGTATATATGAAATGACTGCTCTGAGGCCTGCATTTAAAGCTTTTGATATGCAAGCTCTTATCAGTAAGATCACCAAGTCAATTGTGTCGCCATTGCCAACTAGATATTCTGGTGCATTTAGAGGACTTATTAAGAGCATGCTACGAAAAAGTCCAGAACACAGGCCAAGTGCAGCTGAACTACTCAAGCATCCACATCTCCAACCCTATGTGCTGCAAGTCCATTTGAAATCTTCTCCTGCTCGCAACATAATTCCTTCCCATCAGTCTCCGATTGACAAGGTTAAGAAAATGACATTTCCCACTGAGTCCATGTGCAGAAGCAAGGGCAGGAGAAACTCTTTGGGTAATGAGAGAATCGTGACCTTCAGCAGACCTTCTCCTGAAAGGAAGTTTACTAGTTCTATTCAGAGTATCAAGGATTACTCAACTACTCGGAGTGTCAAAGATTTATCTATCGATGTTAGTTTGGTCGAGGAGGTTAGTAGTAAAACAACTTTTACCACAAGAACATCGAGTATTGTGAAGACTCCCAAGAGAACTCCAAGCAAAACAATCACAACTCCCCAGTTAGAACCTCCAAAGGTATCTTACAACAGAGTAAATCGGAGCGAGCTGCTTTCAAGAACACCGGTGAACAGAAGCGCTCGGGTAATCCGCAGAGCTTCCCTCCCACTCCCACTGCCATCATCCGAGACACCGAAGCGCGGCGTCAGCAGCATCAGCATCCTCGAGCAGCTGGAATCCCCCGACGTATCCGTGAATTCGCCTCGGATAGACCGGATCGCCGAGTTCCCGCTGGCCTCATCCGAAGATCCACCGTTCCTCAAGCTCCACGGACGCCGCTCTCCAACTCCAACGCCACAGCATTGCGTCATCGACCAGTCGATCACCAAGGACAAATGCATGGTCGAAGCGTTCCACATCATCGACGTCGATGACGACGACGGGAGGAGCGACTCGTCGTCGGGCCGTAACAACGCCGCGGCGGCTGCCTCGAGCCGCGACGGCTCGTCGGAGTCGACGAGGCAGCGGCGGTTCGACACGTCGTCGTACCAGCAGCGCGCGGAGGCGCTGGAGGGGCTGCTGGAGTTCAGCGCGCAGCTGCTGCAGCAGGAGAGGTACGACGAGCTGGGCGTCCTGCTCAAGCCATTCGGCCCGGAGAAGGTGTCCCCGAGGGAGACGGCCATCTGGCTCACCAAGAGCTTCAAGGAGACAGGGCTGTAAGCATATGCGATCACTCTCACCTTGCTCTAGAAAACAAATGAGCAGAAGCAAATTAAATTGTAGCTCAGGAAAGATTAGTTGCTGACAGTGTGACACCATCTCAGTGTTGCCTCCCCCAACTAGCTTATGAAAGATTATTCAGTGATCATCTATGGATTAACAAGGAAGTAGCGGTAGTTCTATACTTCTATGTGGTGTTGGTCTGAAGCAGGAAGTAGTAGTAGTTCATGTTTCTAACCATGTAGGAGTACTTGACAGGTAAACTGGGCATTCCAGCCCGGCTGAAGAATCATCCAGTTGATTGATTTTGTTTCTGTTTGAATAGCATTTCTCTTGTTCATGTAATCTTGAGTTATTGAAGGTTTAGAGAGAGAGAGAGAGAGAGCTGCTTGCCTTGTATTATCCAAAGTAGGAATTCAGACAATGGCCATATCTGATGGAGACAACAAGAAGAATTTGAGGAGCTTGTACTGTACTATGCACAAAGATAA]

[+] EMBL AK073129             [CTCTCCTCCTCCCCGCACCGCCGCATCCCTTTCTTTCCCCCACCCCTTCCCGCTACGACAAACCATAGCATATCCTCGTCTCAACACTCTCCTCTGCCTGATCAAAAAAGAAAATCAAATGCGGTGAGATCTGCGGGGTCGTGATCCTCAAACCATTTGGCTCTGGTAACTGCAACTGCAAAACGGCACAGCCATGGAGCAGTACGAGGTACTGGAGCAGATCGGCAAAGGAGCATTTGGTTCTGCCCTGCTTGTCAGGCACAAGGTGGAGAAGAAGAAGTATGTGTTGAAAAAGATCCGGCTTGCCAGGCAGACAGACCGCACTCGCAGGTCTGCTCACCAGGAGATGCAGCTCATTGCCACAGTGAGGAACCCATTCATCGTGGAGTACAAGGATTCATGGGTGGAGAAGGGTTGCTATGTTTGCATCATTATAGGATACTGTGAAGGAGGAGACATGGCTGAAGCTATTAAAAGAGCTACAGGTGATCATTTCTCTGAGGAGAAGCTTTGCAAGTGGCTTGTGCAGCTCCTCATGGCCCTTGACTATTTGCATGCAAATCACATTCTTCACCGTGATGTGAAGGGATCAAAGTATAAGACTAGGTGACTTTGGGCTTGCAAAAATATTGACCTCTGATGATCTAGCATCCTCTGTGGTAGGAACACCAAGTTATATGTGCCCAGAACTACTTGCTGATATACCTTATGGTACCAAATCTGATATTTGGTCACTAGGATGTTGTATATATGAAATGACTGCTCTGAGGCCTGCATTTAAAGCTTTTGATATGCAAGCTCTTATCAGTAAGATCACCAAGTCAATTGTGTCGCCATTGCCAACTAGATATTCTGGTGCATTTAGAGGACTTATTAAGAGCATGCTACGAAAAAGTCCAGAACACAGGCCAAGTGCAGCTGAACTACTCAAGCATCCACATCTCCAACCCTATGTGCTGCAAGTCCATTTGAAATCTTCTCCTGCTCGCAACATAATTCCTTCCCATCAGTCTCCGATTGACAAGGTTAAGAAAATGACATTTCCCACTGAGTCCATGTGCAGAAGCAAGGGCAGGAGAAACTCTTTGGGTAATGAGAGAATCGTGACCTTCAGCAGACCTTCTCCTGAAAGGAAGTTTACTAGTTCTATTCAGAGTATCAAGGATTACTCAACTACTCGGAGTGTCAAAGATTTATCTATCGATGTTAGTTTGGTCGAGGAGGTTAGTAGTAAAACAACTTTTACCACAAGAACATCGAGTATTGTGAAGACTCCCAAGAGAACTCCAAGCAAAACAATCACAACTCCCCAGTTAGAACCTCCAAAGGTATCTTACAACAGAGTAAATCGGAGCGAGCTGCTTTCAAGAACACCGGTGAACAGAAGCGCTCGGGTAATCCGCAGAGCTTCCCTCCCACTCCCACTGCCATCATCCGAGACACCGAAGCGCGGCGTCAGCAGCATCAGCATCCTCGAGCAGCTGGAATCCCCCGACGTATCCGTGAATTCGCCTCGGATAGACCGGATCGCCGAGTTCCCGCTGGCCTCATCCGAAGATCCACCGTTCCTCAAGCTCCACGGACGCCGCTCTCCAACTCCAACGCCACAGCATTGCGTCATCGACCAGTCGATCACCAAGGACAAATGCATGGTCGAAGCGTTCCACATCATCGACGTCGATGACGACGACGGGAGGAGCGACTCGTCGTCGGGCCGTAACAACGCCGCGGCGGCTGCCTCGAGCCGCGACGGCTCGTCGGAGTCGACGAGGCAGCGGCGGTTCGACACGTCGTCGTACCAGCAGCGCGCGGAGGCGCTGGAGGGGCTGCTGGAGTTCAGCGCGCAGCTGCTGCAGCAGGAGAGGTACGACGAGCTGGGCGTCCTGCTCAAGCCATTCGGCCCGGAGAAGGTGTCCCCGAGGGAGACGGCCATCTGGCTCACCAAGAGCTTCAAGGAGACAGGGCTGTAAGCATATGCGATCACTCTCACCTTGCTCTAGAAAACAAATGAGCAGAAGCAAATTAAATTGTAGCTCAGGAAAGATTAGTTGCTGACAGTGTGACACCATCTCAGTGTTGCCTCCCCCAACTAGCTTATGAAAGATTATTCAGTGATCATCTATGGATTAACAAGGAAGTAGCGGTAGTTCTATACTTCTATGTGGTGTTGGTCTGAAGCAGGAAGTAGTAGTAGTTCATGTTTCTAACCATGTAGGAGTACTTGACAGGTAAACTGGGCATTCCAGCCCGGCTGAAGAATCATCCAGTTGATTGATTTTGTTTCTGTTTGAATAGCATTTCTCTTGTTCATGTAATCTTGAGTTATTGAAGGTTTAGAGAGAGAGAGAGAGAGAGCTGCTTGCCTTGTATTATCCAAAGTAGGAATTCAGACAATGGCCATATCTGATGGAGACAACAAGAAGAATTTGAGGAGCTTGTACTGTACTATGCACAAAGATAA]




>consensus_10340#0
CTCTCCTCCTCCCCGCACCGCCGCATCCCTTTCTTTCCCCCACCCCTTCCCGCTACGACA
AACCATAGCATATCCTCGTCTCAACACTCTCCTCTGCCTGATCAAAAAAGAAAATCAAAT
GCGGTGAGATCTGCGGGGTCGTGATCCTCAAACCATTTGGCTCTGGTAACTGCAACTGCA
AAACGGCACAGCCATGGAGCAGTACGAGGTACTGGAGCAGATCGGCAAAGGAGCATTTGG
TTCTGCCCTGCTTGTCAGGCACAAGGTGGAGAAGAAGAAGTATGTGTTGAAAAAGATCCG
GCTTGCCAGGCAGACAGACCGCACTCGCAGGTCTGCTCACCAGGAGATGCAGCTCATTGC
CACAGTGAGGAACCCATTCATCGTGGAGTACAAGGATTCATGGGTGGAGAAGGGTTGCTA
TGTTTGCATCATTATAGGATACTGTGAAGGAGGAGACATGGCTGAAGCTATTAAAAGAGC
TACAGGTGATCATTTCTCTGAGGAGAAGCTTTGCAAGTGGCTTGTGCAGCTCCTCATGGC
CCTTGACTATTTGCATGCAAATCACATTCTTCACCGTGATGTGAAGGGATCAAAGTATAA
GACTAGGTGACTTTGGGCTTGCAAAAATATTGACCTCTGATGATCTAGCATCCTCTGTGG
TAGGAACACCAAGTTATATGTGCCCAGAACTACTTGCTGATATACCTTATGGTACCAAAT
CTGATATTTGGTCACTAGGATGTTGTATATATGAAATGACTGCTCTGAGGCCTGCATTTA
AAGCTTTTGATATGCAAGCTCTTATCAGTAAGATCACCAAGTCAATTGTGTCGCCATTGC
CAACTAGATATTCTGGTGCATTTAGAGGACTTATTAAGAGCATGCTACGAAAAAGTCCAG
AACACAGGCCAAGTGCAGCTGAACTACTCAAGCATCCACATCTCCAACCCTATGTGCTGC
AAGTCCATTTGAAATCTTCTCCTGCTCGCAACATAATTCCTTCCCATCAGTCTCCGATTG
ACAAGGTTAAGAAAATGACATTTCCCACTGAGTCCATGTGCAGAAGCAAGGGCAGGAGAA
ACTCTTTGGGTAATGAGAGAATCGTGACCTTCAGCAGACCTTCTCCTGAAAGGAAGTTTA
CTAGTTCTATTCAGAGTATCAAGGATTACTCAACTACTCGGAGTGTCAAAGATTTATCTA
TCGATGTTAGTTTGGTCGAGGAGGTTAGTAGTAAAACAACTTTTACCACAAGAACATCGA
GTATTGTGAAGACTCCCAAGAGAACTCCAAGCAAAACAATCACAACTCCCCAGTTAGAAC
CTCCAAAGGTATCTTACAACAGAGTAAATCGGAGCGAGCTGCTTTCAAGAACACCGGTGA
ACAGAAGCGCTCGGGTAATCCGCAGAGCTTCCCTCCCACTCCCACTGCCATCATCCGAGA
CACCGAAGCGCGGCGTCAGCAGCATCAGCATCCTCGAGCAGCTGGAATCCCCCGACGTAT
CCGTGAATTCGCCTCGGATAGACCGGATCGCCGAGTTCCCGCTGGCCTCATCCGAAGATC
CACCGTTCCTCAAGCTCCACGGACGCCGCTCTCCAACTCCAACGCCACAGCATTGCGTCA
TCGACCAGTCGATCACCAAGGACAAATGCATGGTCGAAGCGTTCCACATCATCGACGTCG
ATGACGACGACGGGAGGAGCGACTCGTCGTCGGGCCGTAACAACGCCGCGGCGGCTGCCT
CGAGCCGCGACGGCTCGTCGGAGTCGACGAGGCAGCGGCGGTTCGACACGTCGTCGTACC
AGCAGCGCGCGGAGGCGCTGGAGGGGCTGCTGGAGTTCAGCGCGCAGCTGCTGCAGCAGG
AGAGGTACGACGAGCTGGGCGTCCTGCTCAAGCCATTCGGCCCGGAGAAGGTGTCCCCGA
GGGAGACGGCCATCTGGCTCACCAAGAGCTTCAAGGAGACAGGGCTGTAAGCATATGCGA
TCACTCTCACCTTGCTCTAGAAAACAAATGAGCAGAAGCAAATTAAATTGTAGCTCAGGA
AAGATTAGTTGCTGACAGTGTGACACCATCTCAGTGTTGCCTCCCCCAACTAGCTTATGA
AAGATTATTCAGTGATCATCTATGGATTAACAAGGAAGTAGCGGTAGTTCTATACTTCTA
TGTGGTGTTGGTCTGAAGCAGGAAGTAGTAGTAGTTCATGTTTCTAACCATGTAGGAGTA
CTTGACAGGTAAACTGGGCATTCCAGCCCGGCTGAAGAATCATCCAGTTGATTGATTTTG
TTTCTGTTTGAATAGCATTTCTCTTGTTCATGTAATCTTGAGTTATTGAAGGTTTAGAGA
GAGAGAGAGAGAGAGCTGCTTGCCTTGTATTATCCAAAGTAGGAATTCAGACAATGGCCA
TATCTGATGGAGACAACAAGAAGAATTTGAGGAGCTTGTACTGTACTATGCACAAAGATA
A

consensusID : consensus_10340#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2281
fasta sequence

                              [CAAATACACAACTACTACTACCCCCTCTCTCTCTCTCCGTTCTCCTTTTCTCCTCCACGGCAGTTTTATATAAAATTCGCAGCTTTCAAAAGCAAACCAAAACGGCAAAGTTTGAACTTTGAACTCTCCTCCTCCCCGCACCGCCGCATCCCTTTCTTTCCCCCACCCCTTCCCGCTACGACAAACCATAGCATATCCTCGTCTCAACACTCTCCTCTGCCTGATCAAAAAAGAAAATCAAATGCGGTGAGATCTGCGGGGTCGTGATCCTCAAACCATTTGGCTCTGGTAACTGCAACTGCAAAACGGCACAGCCATGGAGCAGTACGAGGTACTGGAGCAGATCGGCAAAGGAGCATTTGGTTCTGCCCTGCTTGTCAGGCACAAGGTGGAGAAGAAGAAGTATGTGTTGAAAAAGATCCGGCTTGCCAGGCAGACAGACCGCACTCGCAGGTCTGCTCACCAGGAGATGCAGCTCATTGCCACAGTGAGGAACCCATTCATCGTGGAGTACAAGGATTCATGGGTGGAGAAGGGTTGCTATGTTTGCATCATTATAGGATACTGTGAAGGAGGAGACATGGCTGAAGCTATTAAAAGAGCTACAGGTGATCATTTCTCTGAGGAGAAGCTTTGCAAGTGGCTTGTGCAGCTCCTCATGGCCCTTGACTATTTGCATGCAAATCACATTCTTCACCGTGATGTGAAGTGCTCAAACATTTTTCTTACTAGGGATCAAAGTATAAGACTAGGTGACTTTGGGCTTGCAAAAATATTGACCTCTGATGATCTAGCATCCTCTGTGGTAGGAACACCAAGTTATATGTGCCCAGAACTACTTGCTGATATACCTTATGGTACCAAATCTGATATTTGGTCACTAGGATGTTGTATATATGAAATGACTGCTCTGAGGCCTGCATTTAAAGCTTTTGATATGCAAGCTCTTATCAGTAAGATCACCAAGTCAATTGTGTCGCCATTGCCAACTAGATATTCTGGTGCATTTAGGGGACTTATTAAGAGCATGCTACGAAAAAGTCCAGAACACAGGCCAAGTGCAGCTGAACTACTCAAGCATCCACATCTCCAACCCTATGTGCTGCAAGTCCATTTGAAATCTTCTCCTGCTCGCAACATAATTCCTTCCCATCAGTCTCCGATTGACAAGGTTAAGAAAATGACATTTCCCACTGAGTCCATGTGCAGAAGCAAGGGCAGGAGAAACTCTTTGGGTAATGAGAGAATCGTGACCTTCAGCAAACCTTCTCCTGAAAGGAAGTTTACTAGTTCTATTCAGAGTATCAAGGATTACTCAACTACTCGGAGTGTCAAAGATTTATCTATCGATGTTAGTTTGGTCGAGGAGGTTAGTAGTAAAACAACTTTTACCACAAGAACATCGAGTATTGTGAAGACTCCCAAGAGAACTCCAAGCAAAACAATCACAACTCCCCAGTTAGAACCTCCAAAGGTATCTTACAACAGAGTAAATCGGAGCGAGCTGCTTTCAAGAACACCGGTGAACAGAAGCGCTCGGGTAATCCGCAGAGCTTCCCTCCCACTCCCACTGCCATCATCCGAGACACCGAAGCGCGGCGTCAGCAGCATCAGCATCCTCGAGCAGCTGGAATCCCCCGACGTATCCGTGAATTCGCCTCGGATAGACCGGATCGCCGAGTTCCCGCTGGCCTCATCCGAAGATCCACCGTTCCTCAAGCTCCACGGACGCCGCTCTCCAACTCCAACGCCACAGCATTGCGTCATCGACCAGTCGATCACCAAGGACAAATGCATGGTCGAAGCGTTCCACATCATCGACGTCGATGACGACGACGGGAGGAGCGACTCGTCGTCGGGCCGTAACAACGCCGCGGCGGCTGCCTCGAGCCGCGCCGGCTCGTCGGAGTCGACGAGGCAGCGGCGGTTCGACACGTCGTCGTACCAGCAGCGCGCGGAGGCGCTGGAGGGGCTGCTGGAGTTCAGCGCGCAGCTGCTGCAGCAGGAGAGGTACGACGAGCTGGGCGTCCTGCTCAAGCCATTCGGCCCGGAGAAGGTGTCCCCGAGGGAGACGGCCATCTGGCTCACCAAGAGCTTCAAGGAGACAGGGCTGTAAGCATATGCGATCACTCTCACCTTGCTCTAGAAAACAAATGAGCAGAAGCAAATTAAATTGTAGCTCAGGAAAGATTAGTTGCTGACAGTGTGACACCATCTCAGTGTTGCCTCCCCCAACTAGCTTATGAAAGATTATTCAGTGATCATCTATGGATTAACAAGG]

[+] EMBL AK073903             [CAAATACACAACTACTACTACCCCCTCTCTCTCTCTCCGTTCTCCTTTTCTCCTCCACGGCAGTTTTATATAAAATTCGCAGCTTTCAAAAGCAAACCAAAACGGCAAAGTTTGAACTTTGAACTCTCCTCCTCCCCGCACCGCCGCATCCCTTTCTTTCCCCCACCCCTTCCCGCTACGACAAACCATAGCATATCCTCGTCTCAACACTCTCCTCTGCCTGATCAAAAAAGAAAATCAAATGCGGTGAGATCTGCGGGGTCGTGATCCTCAAACCATTTGGCTCTGGTAACTGCAACTGCAAAACGGCACAGCCATGGAGCAGTACGAGGTACTGGAGCAGATCGGCAAAGGAGCATTTGGTTCTGCCCTGCTTGTCAGGCACAAGGTGGAGAAGAAGAAGTATGTGTTGAAAAAGATCCGGCTTGCCAGGCAGACAGACCGCACTCGCAGGTCTGCTCACCAGGAGATGCAGCTCATTGCCACAGTGAGGAACCCATTCATCGTGGAGTACAAGGATTCATGGGTGGAGAAGGGTTGCTATGTTTGCATCATTATAGGATACTGTGAAGGAGGAGACATGGCTGAAGCTATTAAAAGAGCTACAGGTGATCATTTCTCTGAGGAGAAGCTTTGCAAGTGGCTTGTGCAGCTCCTCATGGCCCTTGACTATTTGCATGCAAATCACATTCTTCACCGTGATGTGAAGTGCTCAAACATTTTTCTTACTAGGGATCAAAGTATAAGACTAGGTGACTTTGGGCTTGCAAAAATATTGACCTCTGATGATCTAGCATCCTCTGTGGTAGGAACACCAAGTTATATGTGCCCAGAACTACTTGCTGATATACCTTATGGTACCAAATCTGATATTTGGTCACTAGGATGTTGTATATATGAAATGACTGCTCTGAGGCCTGCATTTAAAGCTTTTGATATGCAAGCTCTTATCAGTAAGATCACCAAGTCAATTGTGTCGCCATTGCCAACTAGATATTCTGGTGCATTTAGGGGACTTATTAAGAGCATGCTACGAAAAAGTCCAGAACACAGGCCAAGTGCAGCTGAACTACTCAAGCATCCACATCTCCAACCCTATGTGCTGCAAGTCCATTTGAAATCTTCTCCTGCTCGCAACATAATTCCTTCCCATCAGTCTCCGATTGACAAGGTTAAGAAAATGACATTTCCCACTGAGTCCATGTGCAGAAGCAAGGGCAGGAGAAACTCTTTGGGTAATGAGAGAATCGTGACCTTCAGCAAACCTTCTCCTGAAAGGAAGTTTACTAGTTCTATTCAGAGTATCAAGGATTACTCAACTACTCGGAGTGTCAAAGATTTATCTATCGATGTTAGTTTGGTCGAGGAGGTTAGTAGTAAAACAACTTTTACCACAAGAACATCGAGTATTGTGAAGACTCCCAAGAGAACTCCAAGCAAAACAATCACAACTCCCCAGTTAGAACCTCCAAAGGTATCTTACAACAGAGTAAATCGGAGCGAGCTGCTTTCAAGAACACCGGTGAACAGAAGCGCTCGGGTAATCCGCAGAGCTTCCCTCCCACTCCCACTGCCATCATCCGAGACACCGAAGCGCGGCGTCAGCAGCATCAGCATCCTCGAGCAGCTGGAATCCCCCGACGTATCCGTGAATTCGCCTCGGATAGACCGGATCGCCGAGTTCCCGCTGGCCTCATCCGAAGATCCACCGTTCCTCAAGCTCCACGGACGCCGCTCTCCAACTCCAACGCCACAGCATTGCGTCATCGACCAGTCGATCACCAAGGACAAATGCATGGTCGAAGCGTTCCACATCATCGACGTCGATGACGACGACGGGAGGAGCGACTCGTCGTCGGGCCGTAACAACGCCGCGGCGGCTGCCTCGAGCCGCGCCGGCTCGTCGGAGTCGACGAGGCAGCGGCGGTTCGACACGTCGTCGTACCAGCAGCGCGCGGAGGCGCTGGAGGGGCTGCTGGAGTTCAGCGCGCAGCTGCTGCAGCAGGAGAGGTACGACGAGCTGGGCGTCCTGCTCAAGCCATTCGGCCCGGAGAAGGTGTCCCCGAGGGAGACGGCCATCTGGCTCACCAAGAGCTTCAAGGAGACAGGGCTGTAAGCATATGCGATCACTCTCACCTTGCTCTAGAAAACAAATGAGCAGAAGCAAATTAAATTGTAGCTCAGGAAAGATTAGTTGCTGACAGTGTGACACCATCTCAGTGTTGCCTCCCCCAACTAGCTTATGAAAGATTATTCAGTGATCATCTATGGATTAACAAGG]
[+] EMBL AU067988             [                                                                                                                                                                                                                                                                                                                                                                            TCTGCCCTGCTTGTCAGGCACAAGGTGGAGAAGAAGAAGTATGTGTTGAAAAAGATCCGGCTTGCCAGGCAGACAGACCGCACTCGCAGGTCTGCTCACCAGGAGATGCAGCTCATTGCCACAGTGAGGAACCCATTCATCGTGGAGTACAAGGATTCATGGGTGGAGAAGGGTTGCTATGTTTGCATCATTATAGGATACTGTGAAGGAGGAGACATGGCTGAAGCTATTAAAAGAGCTACAGGTGATCATTTCTCTGAGGAGAAGCTTTGCAAGTGGCTTGTGCAGCTCCTCATGGCNCTTGACTATTTGCATGCAAATCACATTCTTCACCGNGATGTGAAGTGCTCACACATTTTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]




>consensus_10340#1
CAAATACACAACTACTACTACCCCCTCTCTCTCTCTCCGTTCTCCTTTTCTCCTCCACGG
CAGTTTTATATAAAATTCGCAGCTTTCAAAAGCAAACCAAAACGGCAAAGTTTGAACTTT
GAACTCTCCTCCTCCCCGCACCGCCGCATCCCTTTCTTTCCCCCACCCCTTCCCGCTACG
ACAAACCATAGCATATCCTCGTCTCAACACTCTCCTCTGCCTGATCAAAAAAGAAAATCA
AATGCGGTGAGATCTGCGGGGTCGTGATCCTCAAACCATTTGGCTCTGGTAACTGCAACT
GCAAAACGGCACAGCCATGGAGCAGTACGAGGTACTGGAGCAGATCGGCAAAGGAGCATT
TGGTTCTGCCCTGCTTGTCAGGCACAAGGTGGAGAAGAAGAAGTATGTGTTGAAAAAGAT
CCGGCTTGCCAGGCAGACAGACCGCACTCGCAGGTCTGCTCACCAGGAGATGCAGCTCAT
TGCCACAGTGAGGAACCCATTCATCGTGGAGTACAAGGATTCATGGGTGGAGAAGGGTTG
CTATGTTTGCATCATTATAGGATACTGTGAAGGAGGAGACATGGCTGAAGCTATTAAAAG
AGCTACAGGTGATCATTTCTCTGAGGAGAAGCTTTGCAAGTGGCTTGTGCAGCTCCTCAT
GGCCCTTGACTATTTGCATGCAAATCACATTCTTCACCGTGATGTGAAGTGCTCAAACAT
TTTTCTTACTAGGGATCAAAGTATAAGACTAGGTGACTTTGGGCTTGCAAAAATATTGAC
CTCTGATGATCTAGCATCCTCTGTGGTAGGAACACCAAGTTATATGTGCCCAGAACTACT
TGCTGATATACCTTATGGTACCAAATCTGATATTTGGTCACTAGGATGTTGTATATATGA
AATGACTGCTCTGAGGCCTGCATTTAAAGCTTTTGATATGCAAGCTCTTATCAGTAAGAT
CACCAAGTCAATTGTGTCGCCATTGCCAACTAGATATTCTGGTGCATTTAGGGGACTTAT
TAAGAGCATGCTACGAAAAAGTCCAGAACACAGGCCAAGTGCAGCTGAACTACTCAAGCA
TCCACATCTCCAACCCTATGTGCTGCAAGTCCATTTGAAATCTTCTCCTGCTCGCAACAT
AATTCCTTCCCATCAGTCTCCGATTGACAAGGTTAAGAAAATGACATTTCCCACTGAGTC
CATGTGCAGAAGCAAGGGCAGGAGAAACTCTTTGGGTAATGAGAGAATCGTGACCTTCAG
CAAACCTTCTCCTGAAAGGAAGTTTACTAGTTCTATTCAGAGTATCAAGGATTACTCAAC
TACTCGGAGTGTCAAAGATTTATCTATCGATGTTAGTTTGGTCGAGGAGGTTAGTAGTAA
AACAACTTTTACCACAAGAACATCGAGTATTGTGAAGACTCCCAAGAGAACTCCAAGCAA
AACAATCACAACTCCCCAGTTAGAACCTCCAAAGGTATCTTACAACAGAGTAAATCGGAG
CGAGCTGCTTTCAAGAACACCGGTGAACAGAAGCGCTCGGGTAATCCGCAGAGCTTCCCT
CCCACTCCCACTGCCATCATCCGAGACACCGAAGCGCGGCGTCAGCAGCATCAGCATCCT
CGAGCAGCTGGAATCCCCCGACGTATCCGTGAATTCGCCTCGGATAGACCGGATCGCCGA
GTTCCCGCTGGCCTCATCCGAAGATCCACCGTTCCTCAAGCTCCACGGACGCCGCTCTCC
AACTCCAACGCCACAGCATTGCGTCATCGACCAGTCGATCACCAAGGACAAATGCATGGT
CGAAGCGTTCCACATCATCGACGTCGATGACGACGACGGGAGGAGCGACTCGTCGTCGGG
CCGTAACAACGCCGCGGCGGCTGCCTCGAGCCGCGCCGGCTCGTCGGAGTCGACGAGGCA
GCGGCGGTTCGACACGTCGTCGTACCAGCAGCGCGCGGAGGCGCTGGAGGGGCTGCTGGA
GTTCAGCGCGCAGCTGCTGCAGCAGGAGAGGTACGACGAGCTGGGCGTCCTGCTCAAGCC
ATTCGGCCCGGAGAAGGTGTCCCCGAGGGAGACGGCCATCTGGCTCACCAAGAGCTTCAA
GGAGACAGGGCTGTAAGCATATGCGATCACTCTCACCTTGCTCTAGAAAACAAATGAGCA
GAAGCAAATTAAATTGTAGCTCAGGAAAGATTAGTTGCTGACAGTGTGACACCATCTCAG
TGTTGCCTCCCCCAACTAGCTTATGAAAGATTATTCAGTGATCATCTATGGATTAACAAG
G

consensusID : consensus_10340#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1757
fasta sequence

                              [TAGATTATTTACATGCAAACCACATTCTTCACCGAGATGTCAAGTGCTCCAATATTTTCATTGCCAGGGACCAAAGTATAAGACTTGGTGACTTTGGGCTTGCAAAAATATTGACTTCTGATGATCTGGCATCTTCTGTAGTAGGAACACCAAGTTACATGTGTCCAGAACTTCTTGCTGATATACCATATGGTACCAAGTCAGATATTTGGTCTCTAGGATGTTGTATATATGAAATGACCGCGCTCAGGCCTGCATTTAAAGCTTTTGACATGCAAGCGCTGATTAACAAGATCACGAAATCAATAGTCTCACCATTACCCACTAAATATTCTGGTGCCTTTAGGGGACTTATTAAGAGCATGCTGCGGAAAAGTCCAGAGCACAGACCTAGTGCTGCACAGCTACTCAAGCATCCACAACTTCAGCCTTATGTGCTGCAAGTCCAATTGAAATCTAGTCCTACTCGCAACATACTTCCAATCCATCAATCTTTGACTGACAAAGTTAAGAAGATGACATTTCCTAGTGACGTGGTTGATTCTGCACGCAGAAGAATGGCCAGGAGGAACTCTCTGGGAAATGAGAGGACTGTGACATTTAGCAAGCCATCTCCGGAACGGAATTCAGTTAGCTCTACACGGAGCATCAAAGAATACACAACCACCCAGAGTGTCAAAGGGCTCTCTGTTGACAGTAGTGAGGCTGGGGATGAGGTTACCAGTAAAGCCATCATAACAAAGACATCAAGCATCCTAAGGACGCCCAAGAGCTTGCCAGCCAAGACTTATACAGCTAGAAATCAGCTTGAACCTCCCAAAACATCGTATAACAGAACATACCGCTCTGAGCTGCCCTCAAAAACAACTCCAAACAAAATTGCCCGACCAGCAAGAAGAGCATCACTCCCGCTGTCAACATATGAAACACCCACCAAGCGCAGCATCAGCATTCTGGAACAACTAGACTCCCCTGACGTCTCTGTGAATGCCCCTCGAATCGACAGAATTGCGGAATTCCCACTGGCATCGTCTGAGGACCCCTTGCTCCCCATCCACAACAAGCTCTCTCCTGGCCATGGCTCATGTTCCACTCCTCCCTTTATCAACCGGTCAATCACCAAGGACAAATGCACGATCCAGGTGTTACGCACCGATGGGGACAACGGGAGCGACTCCTCAGGCCGCAACGCCACTGCTGCCTCGAGCCGCGGATCCAATGACTCCAGGCAGCAGCGGTTCGACACCTCGTCGTTCCAGCAGCGTGCCGAGGCATTGGAAGGGCTGCTGGAGTTCAGCGCGCAGCTGCTGCAGCAGGAGAGGTATGAGGAGCTGGGCATTCTGCTGAAGCCATTCGGACCGGAGAAAGCGTCTCCCAGGGAGACGGCCATCTGGCTCACAAAGAGCTTCAAGGAGACGGCATCATAGCGCCACCTTGTATCAGGCGCGTCTAAAATCGCCAGTTTTGTCATGTGCAATATTAGCTCAGGTAGTGGTAAACAATATTTAGGATTTGAGACTTTTAGCTGTTGGGAGGCAGCACCATCTCAGTGTTGCTGTTAACTCAAAATCTACTTCTAGCTCTAGCTAGTTTCCAGTTTTTTACTTTCTATTAGGAATCAGCAATCAGCAGCAGGAGTTGTAGTAGTAGAACTGTAAGTTAAGCTGAAGATCTTGCAAGATCTTAGAACCTTTGTAATCATGTGGCACCTGCAATCATGTAGTGATATAAATGTGGGGTTAAGGAAAAAAAAAAAA]

[+] EMBL AK072382             [TAGATTATTTACATGCAAACCACATTCTTCACCGAGATGTCAAGTGCTCCAATATTTTCATTGCCAGGGACCAAAGTATAAGACTTGGTGACTTTGGGCTTGCAAAAATATTGACTTCTGATGATCTGGCATCTTCTGTAGTAGGAACACCAAGTTACATGTGTCCAGAACTTCTTGCTGATATACCATATGGTACCAAGTCAGATATTTGGTCTCTAGGATGTTGTATATATGAAATGACCGCGCTCAGGCCTGCATTTAAAGCTTTTGACATGCAAGCGCTGATTAACAAGATCACGAAATCAATAGTCTCACCATTACCCACTAAATATTCTGGTGCCTTTAGGGGACTTATTAAGAGCATGCTGCGGAAAAGTCCAGAGCACAGACCTAGTGCTGCACAGCTACTCAAGCATCCACAACTTCAGCCTTATGTGCTGCAAGTCCAATTGAAATCTAGTCCTACTCGCAACATACTTCCAATCCATCAATCTTTGACTGACAAAGTTAAGAAGATGACATTTCCTAGTGACGTGGTTGATTCTGCACGCAGAAGAATGGCCAGGAGGAACTCTCTGGGAAATGAGAGGACTGTGACATTTAGCAAGCCATCTCCGGAACGGAATTCAGTTAGCTCTACACGGAGCATCAAAGAATACACAACCACCCAGAGTGTCAAAGGGCTCTCTGTTGACAGTAGTGAGGCTGGGGATGAGGTTACCAGTAAAGCCATCATAACAAAGACATCAAGCATCCTAAGGACGCCCAAGAGCTTGCCAGCCAAGACTTATACAGCTAGAAATCAGCTTGAACCTCCCAAAACATCGTATAACAGAACATACCGCTCTGAGCTGCCCTCAAAAACAACTCCAAACAAAATTGCCCGACCAGCAAGAAGAGCATCACTCCCGCTGTCAACATATGAAACACCCACCAAGCGCAGCATCAGCATTCTGGAACAACTAGACTCCCCTGACGTCTCTGTGAATGCCCCTCGAATCGACAGAATTGCGGAATTCCCACTGGCATCGTCTGAGGACCCCTTGCTCCCCATCCACAACAAGCTCTCTCCTGGCCATGGCTCATGTTCCACTCCTCCCTTTATCAACCGGTCAATCACCAAGGACAAATGCACGATCCAGGTGTTACGCACCGATGGGGACAACGGGAGCGACTCCTCAGGCCGCAACGCCACTGCTGCCTCGAGCCGCGGATCCAATGACTCCAGGCAGCAGCGGTTCGACACCTCGTCGTTCCAGCAGCGTGCCGAGGCATTGGAAGGGCTGCTGGAGTTCAGCGCGCAGCTGCTGCAGCAGGAGAGGTATGAGGAGCTGGGCATTCTGCTGAAGCCATTCGGACCGGAGAAAGCGTCTCCCAGGGAGACGGCCATCTGGCTCACAAAGAGCTTCAAGGAGACGGCATCATAGCGCCACCTTGTATCAGGCGCGTCTAAAATCGCCAGTTTTGTCATGTGCAATATTAGCTCAGGTAGTGGTAAACAATATTTAGGATTTGAGACTTTTAGCTGTTGGGAGGCAGCACCATCTCAGTGTTGCTGTTAACTCAAAATCTACTTCTAGCTCTAGCTAGTTTCCAGTTTTTTACTTTCTATTAGGAATCAGCAATCAGCAGCAGGAGTTGTAGTAGTAGAACTGTAAGTTAAGCTGAAGATCTTGCAAGATCTTAGAACCTTTGTAATCATGTGGCACCTGCAATCATGTAGTGATATAAATGTGGGGTT                ]
[+] EMBL AK101826             [                                                                                                                                                                                                                                                                                ATGCAAGCGCTGATTAACAAGATCACGAAATCAATAGTCTCACCATTACCCACTAAATATTCTGGTGCCTTTAGGGGACTTATTAAGAGCATGCTGCGGAAAAGTCCAGAGCACAGACCTAGTGCTGCACAGCTACTCAAGCATCCACAACTTCAGCCTTATGTGCTGCAAGTCCAATTGAAATCTAGTCCTACTCGCAACATACTTCCAATCCATCAATCTTTGACTGACAAAGTTAAGAAGATGACATTTCCTAGTGACGTGGTTGATTCTGCACGCAGAAGAATGGCCAGGAGGAACTCTCTGGGAAATGAGAGGACTGTGACATTTAGCAAGCCATCTCCGGAACGGAATTCAGTTAGCTCTACACGGAGCATCAAAGAATACACAACCACCCAGAGTGTCAAAGGGCTCTCTGTTGACAGTAGTGAGGCTGGGGATGAGGTTACCAGTAAAGCCATCATAACAAAGACATCAAGCATCCTAAGGACGCCCAAGAGCTTGCCAGCCAAGACTTATACAGCTAGAAATCAGCTTGAACCTCCCAAAACATCGTATAACAGAACATACCGCTCTGAGCTGCCCTCAAAAACAACTCCAAACAAAATTGCCCGACCAGCAAGAAGAGCATCACTCCCGCTGTCAACATATGAAACACCCACCAAGCGCAGCATCAGCATTCTGGAACAACTAGACTCCCCTGACGTCTCTGTGAATGCCCCTCGAATCGACAGAATTGCGGAATTCCCACTGGCATCGTCTGAGGACCCCTTGCTCCCCATCCACAACAAGCTCTCTCCTGGCCATGGCTCATGTTCCACTCCTCCCTTTATCAACCGGTCAATCACCAAGGACAAATGCACGATCCAGGTGTTACGCACCGATGGGGACAACGGGAGCGACTCCTCAGGCCGCAACGCCACTGCTGCCTCGAGCCGCGGATCCAATGACTCCAGGCAGCAGCGGTTCGACACCTCGTCGTTCCAGCAGCGTGCCGAGGCATTGGAAGGGCTGCTGGAGTTCAGCGCGCAGCTGCTGCAGCAGGAGAGGTATGAGGAGCTGGGCATTCTGCTGAAGCCATTCGGACCGGAGAAAGCGTCTCCCAGGGAGACGGCCATCTGGCTCACAAAGAGCTTCAAGGAGACGGCATCATAGCGCCACCTTGTATCAGGCGCGTCTAAAATCGCCAGTTTTGTCATGTGCAATATTAGCTCAGGTAGTGGTAAACAATATTTAGGATTTGAGACTTTTAGCTGTTGGGAGGCAGCACCATCTCAGT TTTCTGTTAACTCAAAATCTACTTCTAGCTCTAGCTAGTTTCCAGTTTTTTACTTTCTATTAGGAATCAGCAATCAGCAGCAGGAGTTGTAGTAGTAGAACTGTAAGTTAAGCTGAAGATCTTGCAAGATCTTAGAACCTTTGTAATCATGTGGCACCTGCAATCATGTAGTGATATAAATGT                      ]
[-] EMBL CA759510             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CTCTTTCCTGGCCATGGCTCATGTTCCACTCCTCCCTTTATCANCCGGTCAATCACCAAGGACAAATGCACGATCCAGGTGTTACGCACCGATGGGGACAACGGGAGCGACTCCTCAGGCCGCAACGCCACTGCTGCCTCGAGCCACGGATCCAATGACTCCAGGCAGCAGCGGTTCGACACCTCGTCGTTCCAGCAGCGTGCCGAGGCATTGGAAGGGCTGCTGGAGTTCAGCGCGCAGCTGCTGCAGCAGGAGAGGTATGAGGAGCTGGGCATTCTGCTGAAGCCATTCGGACCGGAGAAAGCGTCTCCCAGGGAGACGGCCATCTGGCTCACAAAGAGCTTCAAGGAGACGGCATCATAGCGCCACCTTGTATCAGGCGCGTCTAAAATCGCCAGTTTTGTCATGTGCAATATTAGCTCAGGTAGTGGTAAACAATATTTAGGATTTGAGACTTTTAGCTGTTGGGAGGCAGCACCATCTCAGTGTTGCTGTTAACTCAAAATCTACTTCTAGCTCTAGCTAGTTTCCAGTTTTTTACTTTCTATTAGGAATCAGCAATCAGCAGCAGGAGTTGTAGTAGTAGAACTGTAAGTTAAGCTGAAGATCTTGCAAGATCTTAGAACCTTTGTAATCATGTGGCACCTGCAATCATGTAGTGATATAAATGTGGGGTTAAGGAAAAAAAAAAAA]




>consensus_10340#2
TAGATTATTTACATGCAAACCACATTCTTCACCGAGATGTCAAGTGCTCCAATATTTTCA
TTGCCAGGGACCAAAGTATAAGACTTGGTGACTTTGGGCTTGCAAAAATATTGACTTCTG
ATGATCTGGCATCTTCTGTAGTAGGAACACCAAGTTACATGTGTCCAGAACTTCTTGCTG
ATATACCATATGGTACCAAGTCAGATATTTGGTCTCTAGGATGTTGTATATATGAAATGA
CCGCGCTCAGGCCTGCATTTAAAGCTTTTGACATGCAAGCGCTGATTAACAAGATCACGA
AATCAATAGTCTCACCATTACCCACTAAATATTCTGGTGCCTTTAGGGGACTTATTAAGA
GCATGCTGCGGAAAAGTCCAGAGCACAGACCTAGTGCTGCACAGCTACTCAAGCATCCAC
AACTTCAGCCTTATGTGCTGCAAGTCCAATTGAAATCTAGTCCTACTCGCAACATACTTC
CAATCCATCAATCTTTGACTGACAAAGTTAAGAAGATGACATTTCCTAGTGACGTGGTTG
ATTCTGCACGCAGAAGAATGGCCAGGAGGAACTCTCTGGGAAATGAGAGGACTGTGACAT
TTAGCAAGCCATCTCCGGAACGGAATTCAGTTAGCTCTACACGGAGCATCAAAGAATACA
CAACCACCCAGAGTGTCAAAGGGCTCTCTGTTGACAGTAGTGAGGCTGGGGATGAGGTTA
CCAGTAAAGCCATCATAACAAAGACATCAAGCATCCTAAGGACGCCCAAGAGCTTGCCAG
CCAAGACTTATACAGCTAGAAATCAGCTTGAACCTCCCAAAACATCGTATAACAGAACAT
ACCGCTCTGAGCTGCCCTCAAAAACAACTCCAAACAAAATTGCCCGACCAGCAAGAAGAG
CATCACTCCCGCTGTCAACATATGAAACACCCACCAAGCGCAGCATCAGCATTCTGGAAC
AACTAGACTCCCCTGACGTCTCTGTGAATGCCCCTCGAATCGACAGAATTGCGGAATTCC
CACTGGCATCGTCTGAGGACCCCTTGCTCCCCATCCACAACAAGCTCTCTCCTGGCCATG
GCTCATGTTCCACTCCTCCCTTTATCAACCGGTCAATCACCAAGGACAAATGCACGATCC
AGGTGTTACGCACCGATGGGGACAACGGGAGCGACTCCTCAGGCCGCAACGCCACTGCTG
CCTCGAGCCGCGGATCCAATGACTCCAGGCAGCAGCGGTTCGACACCTCGTCGTTCCAGC
AGCGTGCCGAGGCATTGGAAGGGCTGCTGGAGTTCAGCGCGCAGCTGCTGCAGCAGGAGA
GGTATGAGGAGCTGGGCATTCTGCTGAAGCCATTCGGACCGGAGAAAGCGTCTCCCAGGG
AGACGGCCATCTGGCTCACAAAGAGCTTCAAGGAGACGGCATCATAGCGCCACCTTGTAT
CAGGCGCGTCTAAAATCGCCAGTTTTGTCATGTGCAATATTAGCTCAGGTAGTGGTAAAC
AATATTTAGGATTTGAGACTTTTAGCTGTTGGGAGGCAGCACCATCTCAGTGTTGCTGTT
AACTCAAAATCTACTTCTAGCTCTAGCTAGTTTCCAGTTTTTTACTTTCTATTAGGAATC
AGCAATCAGCAGCAGGAGTTGTAGTAGTAGAACTGTAAGTTAAGCTGAAGATCTTGCAAG
ATCTTAGAACCTTTGTAATCATGTGGCACCTGCAATCATGTAGTGATATAAATGTGGGGT
TAAGGAAAAAAAAAAAA

consensusID : consensus_10340#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 190
fasta sequence

                              [AAGAGCTTCAAGGAGACAGGGCTGTANGCATATGCGNTNACTCTCCCCTTGCTCTAGAANACAAATGAGCAGAAGCAAATTAAATTGTAGCTCAGGAAAGATTAGTTGCTGACAGTGTGACACCATCTCAGTGTTGCCTCCCCNAACTAGCTTATGAAAGATTATTCAGTGATCAAAAAAAAAAAAAAAA]

[+] EMBL AU067989             [AAGAGCTTCAAGGAGACAGGGCTGTANGCATATGCGNTNACTCTCCCCTTGCTCTAGAANACAAATGAGCAGAAGCAAATTAAATTGTAGCTCAGGAAAGATTAGTTGCTGACAGTGTGACACCATCTCAGTGTTGCCTCCCCNAACTAGCTTATGAAAGATTATTCAGTGATCAAAAAAAAAAAAAAAA]




>consensus_10340#3
AAGAGCTTCAAGGAGACAGGGCTGTANGCATATGCGNTNACTCTCCCCTTGCTCTAGAAN
ACAAATGAGCAGAAGCAAATTAAATTGTAGCTCAGGAAAGATTAGTTGCTGACAGTGTGA
CACCATCTCAGTGTTGCCTCCCCNAACTAGCTTATGAAAGATTATTCAGTGATCAAAAAA
AAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10340#0      ------------------------------------------------------------
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      CAAATACACAACTACTACTACCCCCTCTCTCTCTCTCCGTTCTCCTTTTCTCCTCCACGG 60
consensus_10340#2      ------------------------------------------------------------
                                                                                   

consensus_10340#0      ------------------------------------------------------------
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      CAGTTTTATATAAAATTCGCAGCTTTCAAAAGCAAACCAAAACGGCAAAGTTTGAACTTT 120
consensus_10340#2      ------------------------------------------------------------
                                                                                   

consensus_10340#0      ---CTCTCCTCCTCCCCGCACCGCCGCATCCCTTTCTTTCCCCCACCCCTTCCCGCTACG 57
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      GAACTCTCCTCCTCCCCGCACCGCCGCATCCCTTTCTTTCCCCCACCCCTTCCCGCTACG 180
consensus_10340#2      ------------------------------------------------------------
                                                                                   

consensus_10340#0      ACAAACCATAGCATATCCTCGTCTCAACACTCTCCTCTGCCTGATCAAAAAAGAAAATCA 117
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      ACAAACCATAGCATATCCTCGTCTCAACACTCTCCTCTGCCTGATCAAAAAAGAAAATCA 240
consensus_10340#2      ------------------------------------------------------------
                                                                                   

consensus_10340#0      AATGCGGTGAGATCTGCGGGGTCGTGATCCTCAAACCATTTGGCTCTGGTAACTGCAACT 177
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      AATGCGGTGAGATCTGCGGGGTCGTGATCCTCAAACCATTTGGCTCTGGTAACTGCAACT 300
consensus_10340#2      ------------------------------------------------------------
                                                                                   

consensus_10340#0      GCAAAACGGCACAGCCATGGAGCAGTACGAGGTACTGGAGCAGATCGGCAAAGGAGCATT 237
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      GCAAAACGGCACAGCCATGGAGCAGTACGAGGTACTGGAGCAGATCGGCAAAGGAGCATT 360
consensus_10340#2      ------------------------------------------------------------
                                                                                   

consensus_10340#0      TGGTTCTGCCCTGCTTGTCAGGCACAAGGTGGAGAAGAAGAAGTATGTGTTGAAAAAGAT 297
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      TGGTTCTGCCCTGCTTGTCAGGCACAAGGTGGAGAAGAAGAAGTATGTGTTGAAAAAGAT 420
consensus_10340#2      ------------------------------------------------------------
                                                                                   

consensus_10340#0      CCGGCTTGCCAGGCAGACAGACCGCACTCGCAGGTCTGCTCACCAGGAGATGCAGCTCAT 357
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      CCGGCTTGCCAGGCAGACAGACCGCACTCGCAGGTCTGCTCACCAGGAGATGCAGCTCAT 480
consensus_10340#2      ------------------------------------------------------------
                                                                                   

consensus_10340#0      TGCCACAGTGAGGAACCCATTCATCGTGGAGTACAAGGATTCATGGGTGGAGAAGGGTTG 417
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      TGCCACAGTGAGGAACCCATTCATCGTGGAGTACAAGGATTCATGGGTGGAGAAGGGTTG 540
consensus_10340#2      ------------------------------------------------------------
                                                                                   

consensus_10340#0      CTATGTTTGCATCATTATAGGATACTGTGAAGGAGGAGACATGGCTGAAGCTATTAAAAG 477
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      CTATGTTTGCATCATTATAGGATACTGTGAAGGAGGAGACATGGCTGAAGCTATTAAAAG 600
consensus_10340#2      ------------------------------------------------------------
                                                                                   

consensus_10340#0      AGCTACAGGTGATCATTTCTCTGAGGAGAAGCTTTGCAAGTGGCTTGTGCAGCTCCTCAT 537
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      AGCTACAGGTGATCATTTCTCTGAGGAGAAGCTTTGCAAGTGGCTTGTGCAGCTCCTCAT 660
consensus_10340#2      ------------------------------------------------------------
                                                                                   

consensus_10340#0      GGCCCTTGACTATTTGCATGCAAATCACATTCTTCACCGTGATGTGAAG----------- 586
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      GGCCCTTGACTATTTGCATGCAAATCACATTCTTCACCGTGATGTGAAGTGCTCAAACAT 720
consensus_10340#2      -----TAGATTATTTACATGCAAACCACATTCTTCACCGAGATGTCAAGTGCTCCAATAT 55
                                                                                   

consensus_10340#0      ------------GGATCAAAGTATAAGACTAGGTGACTTTGGGCTTGCAAAAATATTGAC 634
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      TTTTCTTACTAGGGATCAAAGTATAAGACTAGGTGACTTTGGGCTTGCAAAAATATTGAC 780
consensus_10340#2      TTTCATTGCCAGGGACCAAAGTATAAGACTTGGTGACTTTGGGCTTGCAAAAATATTGAC 115
                                                                                   

consensus_10340#0      CTCTGATGATCTAGCATCCTCTGTGGTAGGAACACCAAGTTATATGTGCCCAGAACTACT 694
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      CTCTGATGATCTAGCATCCTCTGTGGTAGGAACACCAAGTTATATGTGCCCAGAACTACT 840
consensus_10340#2      TTCTGATGATCTGGCATCTTCTGTAGTAGGAACACCAAGTTACATGTGTCCAGAACTTCT 175
                                                                                   

consensus_10340#0      TGCTGATATACCTTATGGTACCAAATCTGATATTTGGTCACTAGGATGTTGTATATATGA 754
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      TGCTGATATACCTTATGGTACCAAATCTGATATTTGGTCACTAGGATGTTGTATATATGA 900
consensus_10340#2      TGCTGATATACCATATGGTACCAAGTCAGATATTTGGTCTCTAGGATGTTGTATATATGA 235
                                                                                   

consensus_10340#0      AATGACTGCTCTGAGGCCTGCATTTAAAGCTTTTGATATGCAAGCTCTTATCAGTAAGAT 814
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      AATGACTGCTCTGAGGCCTGCATTTAAAGCTTTTGATATGCAAGCTCTTATCAGTAAGAT 960
consensus_10340#2      AATGACCGCGCTCAGGCCTGCATTTAAAGCTTTTGACATGCAAGCGCTGATTAACAAGAT 295
                                                                                   

consensus_10340#0      CACCAAGTCAATTGTGTCGCCATTGCCAACTAGATATTCTGGTGCATTTAGAGGACTTAT 874
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      CACCAAGTCAATTGTGTCGCCATTGCCAACTAGATATTCTGGTGCATTTAGGGGACTTAT 1020
consensus_10340#2      CACGAAATCAATAGTCTCACCATTACCCACTAAATATTCTGGTGCCTTTAGGGGACTTAT 355
                                                                                   

consensus_10340#0      TAAGAGCATGCTACGAAAAAGTCCAGAACACAGGCCAAGTGCAGCTGAACTACTCAAGCA 934
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      TAAGAGCATGCTACGAAAAAGTCCAGAACACAGGCCAAGTGCAGCTGAACTACTCAAGCA 1080
consensus_10340#2      TAAGAGCATGCTGCGGAAAAGTCCAGAGCACAGACCTAGTGCTGCACAGCTACTCAAGCA 415
                                                                                   

consensus_10340#0      TCCACATCTCCAACCCTATGTGCTGCAAGTCCATTTGAAATCTTCTCCTGCTCGCAACAT 994
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      TCCACATCTCCAACCCTATGTGCTGCAAGTCCATTTGAAATCTTCTCCTGCTCGCAACAT 1140
consensus_10340#2      TCCACAACTTCAGCCTTATGTGCTGCAAGTCCAATTGAAATCTAGTCCTACTCGCAACAT 475
                                                                                   

consensus_10340#0      AATTCCTTCCCATCAGTCTCCGATTGACAAGGTTAAGAAAATGACATTTCCCA------- 1047
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      AATTCCTTCCCATCAGTCTCCGATTGACAAGGTTAAGAAAATGACATTTCCCA------- 1193
consensus_10340#2      ACTTCCAATCCATCAATCTTTGACTGACAAAGTTAAGAAGATGACATTTCCTAGTGACGT 535
                                                                                   

consensus_10340#0      --CTGAGTCCATGTGCAGAAGCAAGGGCAGGAGAAACTCTTTGGGTAATGAGAGAATCGT 1105
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      --CTGAGTCCATGTGCAGAAGCAAGGGCAGGAGAAACTCTTTGGGTAATGAGAGAATCGT 1251
consensus_10340#2      GGTTGATTCTGCACGCAGAAGAATGGCCAGGAGGAACTCTCTGGGAAATGAGAGGACTGT 595
                                                                                   

consensus_10340#0      GACCTTCAGCAGACCTTCTCCTGAAAGGAAGTTTACTAGTTCTATTCAGAGTATCAAGGA 1165
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      GACCTTCAGCAAACCTTCTCCTGAAAGGAAGTTTACTAGTTCTATTCAGAGTATCAAGGA 1311
consensus_10340#2      GACATTTAGCAAGCCATCTCCGGAACGGAATTCAGTTAGCTCTACACGGAGCATCAAAGA 655
                                                                                   

consensus_10340#0      TTACTCAACTACTCGGAGTGTCAAAGATTTATCTATCGATGTTAGTTTGGTCGAGGAGGT 1225
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      TTACTCAACTACTCGGAGTGTCAAAGATTTATCTATCGATGTTAGTTTGGTCGAGGAGGT 1371
consensus_10340#2      ATACACAACCACCCAGAGTGTCAAAGGGCTCTCTGTTGACAGTAGTGAGGCTGGGGATGA 715
                                                                                   

consensus_10340#0      TAGTAGTAAAACAACTTTTACCACAAGAACATCGAGTATTGTGAAGACTCCCAAGAGAAC 1285
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      TAGTAGTAAAACAACTTTTACCACAAGAACATCGAGTATTGTGAAGACTCCCAAGAGAAC 1431
consensus_10340#2      GGTTACCAGTAAAGCCATCATAACAAAGACATCAAGCATCCTAAGGACGCCCAAGAGCTT 775
                                                                                   

consensus_10340#0      TCCAAGCAAAACAATCACAACTCCCCAGTTAGAACCTCCAAAGGTATCTTACAACAGAGT 1345
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      TCCAAGCAAAACAATCACAACTCCCCAGTTAGAACCTCCAAAGGTATCTTACAACAGAGT 1491
consensus_10340#2      GCCAGCCAAGACTTATACAGCT---------AGAAATCAGCTTGAACCTCCCAAAACATC 826
                                                                                   

consensus_10340#0      AAATCGGAGCGAGCTGCTTTCAAGAACACCGGTGAACAGAAGCGCTCGGGTAATCCGCAG 1405
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      AAATCGGAGCGAGCTGCTTTCAAGAACACCGGTGAACAGAAGCGCTCGGGTAATCCGCAG 1551
consensus_10340#2      GTATAACAGAACATACCGCTCTGAGCTGCCCTCAAAAACAACTCCAAACAAAATTGCCCG 886
                                                                                   

consensus_10340#0      AGCTTCCCTCCCACTCCCACTGCCATCATCCGAGACACCGAAGCGCGGCGTCAGCAGCAT 1465
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      AGCTTCCCTCCCACTCCCACTGCCATCATCCGAGACACCGAAGCGCGGCGTCAGCAGCAT 1611
consensus_10340#2      ACCAGCAAGAAGAGCATCACTCCCGCTGTCAACATATGAAACACCCACCAAGCGCAGCAT 946
                                                                                   

consensus_10340#0      CAGCATCCTCGAGCAGCTGGAATCCCCCGACGTATCCGTGAATTCGCCTCGGATAGACCG 1525
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      CAGCATCCTCGAGCAGCTGGAATCCCCCGACGTATCCGTGAATTCGCCTCGGATAGACCG 1671
consensus_10340#2      CAGCATTCTGGAACAACTAGACTCCCCTGACGTCTCTGTGAATGCCCCTCGAATCGACAG 1006
                                                                                   

consensus_10340#0      GATCGCCGAGTTCCCGCTGGCCTCATCCGAAGATCCACCGTTCCTCAAGCTCCACGGACG 1585
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      GATCGCCGAGTTCCCGCTGGCCTCATCCGAAGATCCACCGTTCCTCAAGCTCCACGGACG 1731
consensus_10340#2      AATTGCGGAATTCCCACTGGCATCGTCTGAGGACCCCTTGCTCCCCATCCACAACAAGCT 1066
                                                                                   

consensus_10340#0      CCGCTCTCCAACTCCAACGCCACAGCATTGCGTCATCGACCAGTCGATCACCAAGGACAA 1645
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      CCGCTCTCCAACTCCAACGCCACAGCATTGCGTCATCGACCAGTCGATCACCAAGGACAA 1791
consensus_10340#2      CTCTCCTG------------GCCATGGCTCATGTTCCACTCCTCCCTTTATCAACCGGTC 1114
                                                                                   

consensus_10340#0      ATGCATGGTCGAAGCGTTCCACATCATCGACGTCGATGACGACGACGGGAGGAGCGACTC 1705
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      ATGCATGGTCGAAGCGTTCCACATCATCGACGTCGATGACGACGACGGGAGGAGCGACTC 1851
consensus_10340#2      AATCACCAAGGACAAATGCACGATCCAGGTGTTACGCACCGATGGGGACAACGGGAGCGA 1174
                                                                                   

consensus_10340#0      GTCGTCGGGCCGTAACAACGCCGCGGCGGCTGCCTCGAGCCGCGACGGCTCGTCGGAGTC 1765
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      GTCGTCGGGCCGTAACAACGCCGCGGCGGCTGCCTCGAGCCGCGCCGGCTCGTCGGAGTC 1911
consensus_10340#2      CTCCTCAGGCCGCAACGCCACTGCTGCCTCGAGCCGCGGATCCAATGACTC--------- 1225
                                                                                   

consensus_10340#0      GACGAGGCAGCGGCGGTTCGACACGTCGTCGTACCAGCAGCGCGCGGAGGCGCTGGAGGG 1825
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      GACGAGGCAGCGGCGGTTCGACACGTCGTCGTACCAGCAGCGCGCGGAGGCGCTGGAGGG 1971
consensus_10340#2      ---CAGGCAGCAGCGGTTCGACACCTCGTCGTTCCAGCAGCGTGCCGAGGCATTGGAAGG 1282
                                                                                   

consensus_10340#0      GCTGCTGGAGTTCAGCGCGCAGCTGCTGCAGCAGGAGAGGTACGACGAGCTGGGCGTCCT 1885
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      GCTGCTGGAGTTCAGCGCGCAGCTGCTGCAGCAGGAGAGGTACGACGAGCTGGGCGTCCT 2031
consensus_10340#2      GCTGCTGGAGTTCAGCGCGCAGCTGCTGCAGCAGGAGAGGTATGAGGAGCTGGGCATTCT 1342
                                                                                   

consensus_10340#0      GCTCAAGCCATTCGGCCCGGAGAAGGTGTCCCCGAGGGAGACGGCCATCTGGCTCACCAA 1945
consensus_10340#3      ----------------------------------------------------------AA 2
consensus_10340#1      GCTCAAGCCATTCGGCCCGGAGAAGGTGTCCCCGAGGGAGACGGCCATCTGGCTCACCAA 2091
consensus_10340#2      GCTGAAGCCATTCGGACCGGAGAAAGCGTCTCCCAGGGAGACGGCCATCTGGCTCACAAA 1402
                                                                                 **

consensus_10340#0      GAGCTTCAAGGAGACAGGGCTGTA------------AGCATATGCGATCACTCTCACC-- 1991
consensus_10340#3      GAGCTTCAAGGAGACAGGGCTGTA------------NGCATATGCGNTNACTCTCCCC-- 48
consensus_10340#1      GAGCTTCAAGGAGACAGGGCTGTA------------AGCATATGCGATCACTCTCACC-- 2137
consensus_10340#2      GAGCTTCAAGGAGACGGCATCATAGCGCCACCTTGTATCAGGCGCGTCTAAAATCGCCAG 1462
                       *************** *     **              **   ***   *   ** **  

consensus_10340#0      --TTGC--TCTAGAAAACAAAT--GAGCAGAAGCAAATTAAATTGTAGCTCAGGAAAGAT 2045
consensus_10340#3      --TTGC--TCTAGAANACAAAT--GAGCAGAAGCAAATTAAATTGTAGCTCAGGAAAGAT 102
consensus_10340#1      --TTGC--TCTAGAAAACAAAT--GAGCAGAAGCAAATTAAATTGTAGCTCAGGAAAGAT 2191
consensus_10340#2      TTTTGTCATGTGCAATATTAGCTCAGGTAGTGGTAAACAATATTTAGGATTTGAGACTTT 1522
                         ***   * *  ** *  *      * **  * ***  * ***   * *  *  *   *

consensus_10340#0      TAGTTGCTGACAGTGTGACACCATCTCAGTGTTGCCT----CCCCCAACTAGCTTATG-- 2099
consensus_10340#3      TAGTTGCTGACAGTGTGACACCATCTCAGTGTTGCCT----CCCCNAACTAGCTTATG-- 156
consensus_10340#1      TAGTTGCTGACAGTGTGACACCATCTCAGTGTTGCCT----CCCCCAACTAGCTTATG-- 2245
consensus_10340#2      TAGCTGTTGGGAG-GCAGCACCATCTCAGTGTTGCTGTTAACTCAAAATCTACTTCTAGC 1581
                       *** ** **  ** *   *****************      * *  **    *** *   

consensus_10340#0      ---AAAGATTATTCAGTGATCATCTATGGATTAACAAGGAAGTAGCGGTAGTTCTATACT 2156
consensus_10340#3      ---AAAGATTATTCAGTGATCAAAAAAAAAAAAAAAA----------------------- 190
consensus_10340#1      ---AAAGATTATTCAGTGATCATCTATGGATTAACAAGG--------------------- 2281
consensus_10340#2      TCTAGCTAGTTTCCAGTTTTTTACTTTCTATTAGGAATCAGCAATCAGCAGCAGGAGTTG 1641
                          *   * * * ****  *         *  *  **                       

consensus_10340#0      TCTATGTGGTGTTGGTCTGAAGCAGGAAGTAGTAGTAGTTCATGTTTCTAACCATGTAGG 2216
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      ------------------------------------------------------------
consensus_10340#2      TAGTAGTAGAACTGTAAGTTAAGCTGAAGATCTTGCAAGATCTTAGAACCTTTGTAATCA 1701
                                                                                   

consensus_10340#0      AGTACTTGACAGGTAAACTGGGCATTCCAGCCCGGCTGAAGAATCATCCAGTTGATTGAT 2276
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      ------------------------------------------------------------
consensus_10340#2      TGTGGCACCTGCAATCATGTAGTGATATAAATGTGGGGTTAAGGAAAAAAAAAAAA---- 1757
                                                                                   

consensus_10340#0      TTTGTTTCTGTTTGAATAGCATTTCTCTTGTTCATGTAATCTTGAGTTATTGAAGGTTTA 2336
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      ------------------------------------------------------------
consensus_10340#2      ------------------------------------------------------------
                                                                                   

consensus_10340#0      GAGAGAGAGAGAGAGAGAGCTGCTTGCCTTGTATTATCCAAAGTAGGAATTCAGACAATG 2396
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      ------------------------------------------------------------
consensus_10340#2      ------------------------------------------------------------
                                                                                   

consensus_10340#0      GCCATATCTGATGGAGACAACAAGAAGAATTTGAGGAGCTTGTACTGTACTATGCACAAA 2456
consensus_10340#3      ------------------------------------------------------------
consensus_10340#1      ------------------------------------------------------------
consensus_10340#2      ------------------------------------------------------------
                                                                                   

consensus_10340#0      GATAA 2461
consensus_10340#3      -----
consensus_10340#1      -----
consensus_10340#2      -----