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Oryza sativa
cluster # 10341 cluster # 10341       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10341#0 length = 1432 sequences # 5  
consensus_10341#1 length = 707 sequences # 1  
consensus_10341#2 length = 470 sequences # 1  

consensusID : consensus_10341#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1432
fasta sequence
                              [AAGTGGTATCCCTCATTAAGGATGAATCTGGAGAAAGGATTATTGGTGCACGGATCCGTGATACGCTATCAGGTAAAGAATTCGATGCATTTGCAAAGGTGGTTGTTAACGCAGCAGGACCGTTCTGTGACTCTGTGAGGAAGATGGCTAACAATGACGTAGTGCCCATGATCAGTCCAAGCAGTGGAGTGCACATTGTACTTCCTGATTATTATTCCCCTGATGGGATGGGGCTAATTGTCCCTAAAACCAAGGATGGTAGAGTTGTATTTATGCTGCCATGGTTAGGAAGGACAGTAGCTGGTACAACCGACTCTAGTACAGCAATAACAATGCTTCCTGAACCACATGAGGATGAGATACAGTTCATATTAGATGCTATCTGTGATTATCTTAACGTTCAGGTAAGGCGTTCAGATGTTCTTTCTGCCTGGAGTGGTATACGTCCACTGGCTATGGATCCATCGGCAAAAAATACTGAGAGCATTTCCAGAGATCATGTTGTATTTGAAGACTACCCAGGACTAATAACTATCACTGGTGGAAAATGGACAACTTATAGAAGCATGGCTGAAGATGCTGTTAATGCAGCCATAAGGTCAGGTAATTTGAAGCCTGCCAATGGCTGTGTGACTGATCATCTGCATATTCTTGGTGGATATGGTTGGGATCCTGCTTCGTTTACTGTCCTTGCACAGAACTATAAACGGATGAAAAGGACATATGGTGGGAAGATCATTCCAGGTGCAATGGACAGTGCTGTATCGAAGCATCTGTCACATGCATATGGAACTTTGGCTACACAAGTGGCTTCAATTGCCCAGAATGAAGGCTTGGGGAAGCGACTTGCTCATGGATACCCATTTTTGGAGGCTGAAGTAGCATACTGTGCTCGCCACGAGTACTGTGAATCTGCTGTGGACTTCATTGCAAGGAGATGCCGTCTTGCATTTCTTGACACAGATGCTGCTGGGAGAGCATTGCCTCGGATCATCGAGATTTTAGCTCTGGAACGCAAGTGGGACAAGGCAAGGCAGAAGCTTGAACTACAAAAGGGTAAAGATTTCCTGGAAACATTCAAGTCATCCAAGAATGCACAATTCAGGGATGGCAAACATAATGGTCAATGAGTGAAACATAATTTCTGTGAATAAGCGTGGGTCATACAATAAAAGCAAAGTATGAAACTTAGACAATCAGGCTAGTGCAAGAATAATTCGGTGCAAGAGGGCTGGGGTCCTAAAATGTTCTCAGTTGTCCTTTTGTGCACTTTATTACTTCTATCTGATTTGTGGTGAAATAACATCTCATCGGCATGATGTAGATCGATGGATGTACCACGGAAGATTACTCTTTCTAAAAAGTAATAGAATGGTAGGCCCCATTTTCATATTCATACAAAAAAGGGAATACAATCTTTAGGGAGGGGCCC]

[+] EMBL AK058569             [AAGTGGTATCCCTCATTAAGGATGAATCTGGAGAAAGGATTATTGGTGCACGGATCCGTGATACGCTATCAGGTAAAGAATTCGATGCATTTGCAAAGGTGGTTGTTAACGCAGCAGGACCGTTCTGTGACTCTGTGAGGAAGATGGCTAACAATGACGTAGTGCCCATGATCAGTCCAAGCAGTGGAGTGCACATTGTACTTCCTGATTATTATTCCCCTGATGGGATGGGGCTAATTGTCCCTAAAACCAAGGATGGTAGAGTTGTATTTATGCTGCCATGGTTAGGAAGGACAGTAGCTGGTACAACCGACTCTAGTACAGCAATAACAATGCTTCCTGAACCACATGAGGATGAGATACAGTTCATATTAGATGCTATCTGTGATTATCTTAACGTTCAGGTAAGGCGTTCAGATGTTCTTTCTGCCTGGAGTGGTATACGTCCACTGGCTATGGATCCATCGGCAAAAAATACTGAGAGCATTTCCAGAGATCATGTTGTATTTGAAGACTACCCAGGACTAATAACTATCACTGGTGGAAAATGGACAACTTATAGAAGCATGGCTGAAGATGCTGTTAATGCAGCCATAAGGTCAGGTAATTTGAAGCCTGCCAATGGCTGTGTGACTGATCATCTGCATATTCTTGGTGGATATGGTTGGGATCCTGCTTCGTTTACTGTCCTTGCACAGAACTATAAACGGATGAAAAGGACATATGGTGGGAAGATCATTCCAGGTGCAATGGACAGTGCTGTATCGAAGCATCTGTCACATGCATATGGAACTTTGGCTACACAAGTGGCTTCAATTGCCCAGAATGAAGGCTTGGGGAAGCGACTTGCTCATGGATACCCATTTTTGGAGGCTGAAGTAGCATACTGTGCTCGCCACGAGTACTGTGAATCTGCTGTGGACTTCATTGCAAGGAGATGCCGTCTTGCATTTCTTGACACAGATGCTGCTGGGAGAGCATTGCCTCGGATCATCGAGATTTTAGCTCTGGAACGCAAGTGGGACAAGGCAAGGCAGAAGCTTGAACTACAAAAGGGTAAAGATTTCCTGGAAACATTCAAGTCATCCAAGAATGCACAATTCAGGGATGGCAAACATAATGGTCAATGAGTGAAACATAATTTCTGTGAATAAGCGTGGGTCATACAATAAAAGCAAAGTATGAAACTTAGACAATCAGGCTAGTGCAAGAATAATTCGGTGCAAGAGGGCTGGGGTCCTAAAATGTTCTCAGTTGTCCTTTTGTGCACTTTATTACTTCTATCTGATTTGTGGTGAAATAACATCTCATCGGCATGATGTAGATCGATGGATGTACCACGGAAGATTACTCTTTCTAAAAAGTAATAGAATGGTAGG                                                     ]
[+] EMBL AK104305             [AAGTGGTATCCCTCATTAAGGATGAATCTGGAGAAAGGATTATTGGTGCACGGATCCGTGATACGCTATCAGGTAAAGAATTCGATGCATTTGCAAAGGTGGTTGTTAACGCAGCAGGACCGTTCTGTGACTCTGTGAGGAAGATGGCTAACAATGACGTAGTGCCCATGATCAGTCCAAGCAGTGGAGTGCACATTGTACTTCCTGATTATTATTCCCCTGATGGGATGGGGCTAATTGTCCCTAAAACCAAGGATGGTAGAGTTGTATTTATGCTGCCATGGTTAGGAAGGACAGTAGCTGGTACAACCGACTCTAGTACAGCAATAACAATGCTTCCTGAACCACATGAGGATGAGATACAGTTCATATTAGATGCTATCTGTGATTATCTTAACGTTCAGGTAAGGCGTTCAGATGTTCTTTCTGCCTGGAGTGGTATACGTCCACTGGCTATGGATCCATCGGCAAAAAATACTGAGAGCATTTCCAGAGATCATGTTGTATTTGAAGACTACCCAGGACTAATAACTATCACTGGTGGAAAATGGACAACTTATAGAAGCATGGCTGAAGATGCTGTTAATGCAGCCATAAGGTCAGGTAATTTGAAGCCTGCCAATGGCTGTGTGACTGATCATCTGCATATTCTTGGTGGATATGGTTGGGATCCTGCTTCGTTTACTGTCCTTGCACAGAACTATAAACGGATGAAAAGGACATATGGTGGGAAGATCATTCCAGGTGCAATGGACAGTGCTGTATCGAAGCATCTGTCACATGCATATGGAACTTTGGCTACACAAGTGGCTTCAATTGCCCAGAATGAAGGCTTGGGGAAGCGACTTGCTCATGGATACCCATTTTTGGAGGCTGAAGTAGCATACTGTGCTCGCCACGAGTACTGTGAATCTGCTGTGGACTTCATTGCAAGGAGATGCCGTCTTGCATTTCTTGACACAGATGCTGCTGGGAGAGCATTGCCTCGGATCATCGAGATTTTAGCTCTGGAACGCAAGTGGGACAAGGCAAGGCAGAAGCTTGAACTACAAAAGGGTAAAGATTTCCTGGAAACATTCAAGTCATCCAAGAATGCACAATTCAGGGATGGCAAACATAATGGTCAATGAGTGAAACATAATTTCTGTGAATAAGCGTGGGTCATACAATAAAAGCAAAGTATGAAACTTAGACAATCAGGCTAGTGCAAGAATAATTCGGTGCAAGAGGGCTGGGGTCCTAAAATGTTCTCAGTTGTCCTTTTGTGCACTTTATTACTTCTATCTGATTTGTGGTGAAATAACATCTCATCGGCATGATGTAGATCGATGGATGTACCACGGAAGATTACTCTTTCTAAAAAGTAATAGAATGGTAGG                                                     ]
[+] EMBL AU182715             [                                                                      AGGTAAAGAATTCGATGCATTTGCAAAGGTGGTTGTTAACGCAGCAGGACCGTTCTGTGACTCTGTGAGGAAGATGGCTAACAATGACGTAGTGCCCATGATCAGTCCAAGCAGTGGAGTGCACATTGTACTTCCTGATTATTATTCCCCTGATGGGATGGGGCTAATTGTCCCTAAAACCAAGGATGGTAGAGTTGTATTTATGCTGCCATGGTTAGGAAGGACAGTAGCTGGTACAACCGACTCTAGTACAGCAATAACAATGCTTCCTGAACCACATGAGGATGAGATACAGTTCATATTAGATGCTATCTGTGATTATCTTAACGTTCAGGTAAGGCGTTCAGATGTTCTTTCTGCCTGGAGTGGTATACGTCCACTGGCTATGGATCCATCGGCAAAAAATACTGAGAGCATTTCCAGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CB668700             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGCATATTCTTGGTGGATATGGTTGGGATCCTGCTTCGTTTACTGTCCTTGCACAGAACTATAAACGGATGAAAAGGACATATGGTGGGAAGATCATTCCAGGTGCAATGGACAGTGCTGTATCGAAGCATCTGTCACATGCATATGGAACTTTGGCTACACAAGTGGCTTCAATTGCCCAGAATGAAGGCTTGGGGAAGCGACTTGCTCATGGATACCCATTTTTGGAGGCTGAAGTAGCATACTGTGCTCGCCACGAGTACTGTGAATCTGCTGTGGACTTCATTGCAAGGAGATGCCGTCTTGCATTTCTTGACACAGATGCTGCTGGGAGAGCATTGCCTCGGATCATCGAGATTTTAGCTCTGGAACGCAAGTGGGACAAGGCAAGGCAGAAGCTTGAACTACAAAAGGGTAAAGATTTCCTGGAAACATTCAAGTCATCCAAGAATGCACAATTCAGGGATGGCAAACATAATGGTCAATGAGTGAAACATAATTTCTGTGAATAAGCGTGAGTCATACAATAAAAGCAAAGTATGAAACTTAGACAATCAGGCTAGTGCAAGAATAATTCGGTGCAAGAGGGCTGGGGTCCTAAAATGTTCTCAGTTGTCCTTTTGTGCACTTTATTACTTCTATCTGATTTGTGGTGAAATAACATCTCATCGGCATGATGTAGATCGATGGATGTTCCACGGAAGATTACTCTTTCTAAAAAGAAATAGAATGGTATCCCCCATTTTCATATTCATACAAAAAAGGGAATACAATCTTTAGGGAGGGGCCC]
[-] EMBL CB965095             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AAGATCATTCCAGGTGCAATGGACAGTGCTGTATCGAAGCATCTGTCACATGCATATGGAACTTTGGCTACACAAGTGGCTTCAATTGCCCAGAATGAAGGCTTGGGGAAGCGACTTGCTCATGGATACCCATTTTTGGAGGCTGAAGTAGCATACTGTGCTCGCCACGAGTACTGTGAATCTGCTGTGGACTTTATTGCAAGGAGATGCCGTCTTGCATTTCTTGACACAGATGCTGCTGGGAGAGCATTGCCTCGGATCATCGAGATTTTAGCTCTGGAACGCAAGTGGGACAAGGCAAGGCAGAAGCTTGAACTACAAAAGGGTAAAGATTTCCTGGAAACATTCAAATCATCCAAGAATGCACAATTCAGGGATGGCAAACATAATGGTCAATGAGTGAAACATAATTTCTGTGAATAAGCGTGAGTCATACAATAAAAGCAAAGTATGAAACTTAGACAATCAGGCTAGTGCAAGAATAATTCGGTGCAAGAGGGCTGGGGTCCTAAAATGTTCTCAGTTGTCCTTTTGTGCACTTTATTACTTCTATCTGATTTGTGGTGAAATAACATCTCATCGGCATGATGTAGATCGATGGATGTACCACGGAAGATTACTCTTTCTAAAAAGTAATActcc                                                           ]


>consensus_10341#0 AAGTGGTATCCCTCATTAAGGATGAATCTGGAGAAAGGATTATTGGTGCACGGATCCGTG ATACGCTATCAGGTAAAGAATTCGATGCATTTGCAAAGGTGGTTGTTAACGCAGCAGGAC CGTTCTGTGACTCTGTGAGGAAGATGGCTAACAATGACGTAGTGCCCATGATCAGTCCAA GCAGTGGAGTGCACATTGTACTTCCTGATTATTATTCCCCTGATGGGATGGGGCTAATTG TCCCTAAAACCAAGGATGGTAGAGTTGTATTTATGCTGCCATGGTTAGGAAGGACAGTAG CTGGTACAACCGACTCTAGTACAGCAATAACAATGCTTCCTGAACCACATGAGGATGAGA TACAGTTCATATTAGATGCTATCTGTGATTATCTTAACGTTCAGGTAAGGCGTTCAGATG TTCTTTCTGCCTGGAGTGGTATACGTCCACTGGCTATGGATCCATCGGCAAAAAATACTG AGAGCATTTCCAGAGATCATGTTGTATTTGAAGACTACCCAGGACTAATAACTATCACTG GTGGAAAATGGACAACTTATAGAAGCATGGCTGAAGATGCTGTTAATGCAGCCATAAGGT CAGGTAATTTGAAGCCTGCCAATGGCTGTGTGACTGATCATCTGCATATTCTTGGTGGAT ATGGTTGGGATCCTGCTTCGTTTACTGTCCTTGCACAGAACTATAAACGGATGAAAAGGA CATATGGTGGGAAGATCATTCCAGGTGCAATGGACAGTGCTGTATCGAAGCATCTGTCAC ATGCATATGGAACTTTGGCTACACAAGTGGCTTCAATTGCCCAGAATGAAGGCTTGGGGA AGCGACTTGCTCATGGATACCCATTTTTGGAGGCTGAAGTAGCATACTGTGCTCGCCACG AGTACTGTGAATCTGCTGTGGACTTCATTGCAAGGAGATGCCGTCTTGCATTTCTTGACA CAGATGCTGCTGGGAGAGCATTGCCTCGGATCATCGAGATTTTAGCTCTGGAACGCAAGT GGGACAAGGCAAGGCAGAAGCTTGAACTACAAAAGGGTAAAGATTTCCTGGAAACATTCA AGTCATCCAAGAATGCACAATTCAGGGATGGCAAACATAATGGTCAATGAGTGAAACATA ATTTCTGTGAATAAGCGTGGGTCATACAATAAAAGCAAAGTATGAAACTTAGACAATCAG GCTAGTGCAAGAATAATTCGGTGCAAGAGGGCTGGGGTCCTAAAATGTTCTCAGTTGTCC TTTTGTGCACTTTATTACTTCTATCTGATTTGTGGTGAAATAACATCTCATCGGCATGAT GTAGATCGATGGATGTACCACGGAAGATTACTCTTTCTAAAAAGTAATAGAATGGTAGGC CCCATTTTCATATTCATACAAAAAAGGGAATACAATCTTTAGGGAGGGGCCC



consensusID : consensus_10341#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 707
fasta sequence
                              [AATGAAGGCTTGGGGAAGCGACTTGCTCATGGATACCCATTTTTGGAGGCTGAAGTAGCATACTGTGCTCGCCACGAGTACTGTGAATCTGTTGTGGACTTCATTGCAAGGAGATGCCGTCTTGCATTTCTTGACACAGATGTTGTTGGGAGAGCATTGCCTCGGATCATAGAGATTTTAGCTCTGGAACGCAAGTGGGACAAGGCAAGGCAGAAGCTTGAATTACAAAAGGGTAAAGATTTCCTGGAAACATTCAAGTCATCCAAGAATGCACAATTCAGGGATGGCAAACATAATGGTCAATGAGTGAAACATAATTTCTGTGAATAAGCGTGAGTCATACAATAAAAGCAAAGTATGAAACTTAGACAATCAGGGTAGTGCAAGAATAATTCGGTGCAAGAGGGCTGGGGTCTTAAAATGTTGAGCAGTTGTGCCTTCTTGTGCACTTTATTACTTCTATCTGATTTGTGGTGAAATAACATCTCATGGGCATGATGTAGATCGATGGATTTACCACGGAAGATTACTGTTTGTACAAAAGTAATAGAATGGTAGACCACATTTTCATACTTCGATGGTAGTATTAATGTGCTCTGGGTATGTGTGTTTAGGTATTTGAGTGAATTATATGTAAATGAAGGAAACAAAATCATAGGGGATCATATGGCATGGTTATGGGCGACGTGCCTTATAAGGGTGGTTTC]

[-] EMBL CB678554             [AATGAAGGCTTGGGGAAGCGACTTGCTCATGGATACCCATTTTTGGAGGCTGAAGTAGCATACTGTGCTCGCCACGAGTACTGTGAATCTGTTGTGGACTTCATTGCAAGGAGATGCCGTCTTGCATTTCTTGACACAGATGTTGTTGGGAGAGCATTGCCTCGGATCATAGAGATTTTAGCTCTGGAACGCAAGTGGGACAAGGCAAGGCAGAAGCTTGAATTACAAAAGGGTAAAGATTTCCTGGAAACATTCAAGTCATCCAAGAATGCACAATTCAGGGATGGCAAACATAATGGTCAATGAGTGAAACATAATTTCTGTGAATAAGCGTGAGTCATACAATAAAAGCAAAGTATGAAACTTAGACAATCAGGGTAGTGCAAGAATAATTCGGTGCAAGAGGGCTGGGGTCTTAAAATGTTGAGCAGTTGTGCCTTCTTGTGCACTTTATTACTTCTATCTGATTTGTGGTGAAATAACATCTCATGGGCATGATGTAGATCGATGGATTTACCACGGAAGATTACTGTTTGTACAAAAGTAATAGAATGGTAGACCACATTTTCATACTTCGATGGTAGTATTAATGTGCTCTGGGTATGTGTGTTTAGGTATTTGAGTGAATTATATGTAAATGAAGGAAACAAAATCATAGGGGATCATATGGCATGGTTATGGGCGACGTGCCTTATAAGGGTGGTTTC]


>consensus_10341#1 AATGAAGGCTTGGGGAAGCGACTTGCTCATGGATACCCATTTTTGGAGGCTGAAGTAGCA TACTGTGCTCGCCACGAGTACTGTGAATCTGTTGTGGACTTCATTGCAAGGAGATGCCGT CTTGCATTTCTTGACACAGATGTTGTTGGGAGAGCATTGCCTCGGATCATAGAGATTTTA GCTCTGGAACGCAAGTGGGACAAGGCAAGGCAGAAGCTTGAATTACAAAAGGGTAAAGAT TTCCTGGAAACATTCAAGTCATCCAAGAATGCACAATTCAGGGATGGCAAACATAATGGT CAATGAGTGAAACATAATTTCTGTGAATAAGCGTGAGTCATACAATAAAAGCAAAGTATG AAACTTAGACAATCAGGGTAGTGCAAGAATAATTCGGTGCAAGAGGGCTGGGGTCTTAAA ATGTTGAGCAGTTGTGCCTTCTTGTGCACTTTATTACTTCTATCTGATTTGTGGTGAAAT AACATCTCATGGGCATGATGTAGATCGATGGATTTACCACGGAAGATTACTGTTTGTACA AAAGTAATAGAATGGTAGACCACATTTTCATACTTCGATGGTAGTATTAATGTGCTCTGG GTATGTGTGTTTAGGTATTTGAGTGAATTATATGTAAATGAAGGAAACAAAATCATAGGG GATCATATGGCATGGTTATGGGCGACGTGCCTTATAAGGGTGGTTTC



consensusID : consensus_10341#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 470
fasta sequence
                              [ATTTCTTGACACAGATGCTGCTGGGAGAGCATTGCCTCGGATCATCGAGATTTTAGCTCTGGAACGCAAGTGGGACAAGGCAAGGCAGAAGCTTGAACTACAAAAGGGTAAAGATTTCCTGGAAACATTCAAATCATCCAAGAATGCACAATTCAGGGATGGCAAACATAATGGTCAATGAGTGAAACATAATTTCTGTGAATAAGCGTGAGTCATACAATAAAAGCAAAGTATGAAACTTAGACAATCAGGCTAGTGCAAGAATAATTCGGTGCAAGAGGGCTGGGGTCCTAAAATGTTCTCAGTTGTCCTTTTGTGCACTTTATTACTTCTATCTGATTTGTGGTGAAATAACATCTCATCGGCATGATGTAGATCGATGGATGTACCACGGAAGATTACTCTTTCTAAAAAGTAATACTCCCTCCGTTCACAATGTAAGTCATTCTAGCATTTCCCATAANAAAAAA]

[+] EMBL CA756544             [ATTTCTTGACACAGATGCTGCTGGGAGAGCATTGCCTCGGATCATCGAGATTTTAGCTCTGGAACGCAAGTGGGACAAGGCAAGGCAGAAGCTTGAACTACAAAAGGGTAAAGATTTCCTGGAAACATTCAAATCATCCAAGAATGCACAATTCAGGGATGGCAAACATAATGGTCAATGAGTGAAACATAATTTCTGTGAATAAGCGTGAGTCATACAATAAAAGCAAAGTATGAAACTTAGACAATCAGGCTAGTGCAAGAATAATTCGGTGCAAGAGGGCTGGGGTCCTAAAATGTTCTCAGTTGTCCTTTTGTGCACTTTATTACTTCTATCTGATTTGTGGTGAAATAACATCTCATCGGCATGATGTAGATCGATGGATGTACCACGGAAGATTACTCTTTCTAAAAAGTAATACTCCCTCCGTTCACAATGTAAGTCATTCTAGCATTTCCCATAANAAAAAA]


>consensus_10341#2 ATTTCTTGACACAGATGCTGCTGGGAGAGCATTGCCTCGGATCATCGAGATTTTAGCTCT GGAACGCAAGTGGGACAAGGCAAGGCAGAAGCTTGAACTACAAAAGGGTAAAGATTTCCT GGAAACATTCAAATCATCCAAGAATGCACAATTCAGGGATGGCAAACATAATGGTCAATG AGTGAAACATAATTTCTGTGAATAAGCGTGAGTCATACAATAAAAGCAAAGTATGAAACT TAGACAATCAGGCTAGTGCAAGAATAATTCGGTGCAAGAGGGCTGGGGTCCTAAAATGTT CTCAGTTGTCCTTTTGTGCACTTTATTACTTCTATCTGATTTGTGGTGAAATAACATCTC ATCGGCATGATGTAGATCGATGGATGTACCACGGAAGATTACTCTTTCTAAAAAGTAATA CTCCCTCCGTTCACAATGTAAGTCATTCTAGCATTTCCCATAANAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10341#0      AAGTGGTATCCCTCATTAAGGATGAATCTGGAGAAAGGATTATTGGTGCACGGATCCGTG 60
consensus_10341#2      ------------------------------------------------------------
consensus_10341#1      ------------------------------------------------------------
                                                                                   

consensus_10341#0      ATACGCTATCAGGTAAAGAATTCGATGCATTTGCAAAGGTGGTTGTTAACGCAGCAGGAC 120
consensus_10341#2      ------------------------------------------------------------
consensus_10341#1      ------------------------------------------------------------
                                                                                   

consensus_10341#0      CGTTCTGTGACTCTGTGAGGAAGATGGCTAACAATGACGTAGTGCCCATGATCAGTCCAA 180
consensus_10341#2      ------------------------------------------------------------
consensus_10341#1      ------------------------------------------------------------
                                                                                   

consensus_10341#0      GCAGTGGAGTGCACATTGTACTTCCTGATTATTATTCCCCTGATGGGATGGGGCTAATTG 240
consensus_10341#2      ------------------------------------------------------------
consensus_10341#1      ------------------------------------------------------------
                                                                                   

consensus_10341#0      TCCCTAAAACCAAGGATGGTAGAGTTGTATTTATGCTGCCATGGTTAGGAAGGACAGTAG 300
consensus_10341#2      ------------------------------------------------------------
consensus_10341#1      ------------------------------------------------------------
                                                                                   

consensus_10341#0      CTGGTACAACCGACTCTAGTACAGCAATAACAATGCTTCCTGAACCACATGAGGATGAGA 360
consensus_10341#2      ------------------------------------------------------------
consensus_10341#1      ------------------------------------------------------------
                                                                                   

consensus_10341#0      TACAGTTCATATTAGATGCTATCTGTGATTATCTTAACGTTCAGGTAAGGCGTTCAGATG 420
consensus_10341#2      ------------------------------------------------------------
consensus_10341#1      ------------------------------------------------------------
                                                                                   

consensus_10341#0      TTCTTTCTGCCTGGAGTGGTATACGTCCACTGGCTATGGATCCATCGGCAAAAAATACTG 480
consensus_10341#2      ------------------------------------------------------------
consensus_10341#1      ------------------------------------------------------------
                                                                                   

consensus_10341#0      AGAGCATTTCCAGAGATCATGTTGTATTTGAAGACTACCCAGGACTAATAACTATCACTG 540
consensus_10341#2      ------------------------------------------------------------
consensus_10341#1      ------------------------------------------------------------
                                                                                   

consensus_10341#0      GTGGAAAATGGACAACTTATAGAAGCATGGCTGAAGATGCTGTTAATGCAGCCATAAGGT 600
consensus_10341#2      ------------------------------------------------------------
consensus_10341#1      ------------------------------------------------------------
                                                                                   

consensus_10341#0      CAGGTAATTTGAAGCCTGCCAATGGCTGTGTGACTGATCATCTGCATATTCTTGGTGGAT 660
consensus_10341#2      ------------------------------------------------------------
consensus_10341#1      ------------------------------------------------------------
                                                                                   

consensus_10341#0      ATGGTTGGGATCCTGCTTCGTTTACTGTCCTTGCACAGAACTATAAACGGATGAAAAGGA 720
consensus_10341#2      ------------------------------------------------------------
consensus_10341#1      ------------------------------------------------------------
                                                                                   

consensus_10341#0      CATATGGTGGGAAGATCATTCCAGGTGCAATGGACAGTGCTGTATCGAAGCATCTGTCAC 780
consensus_10341#2      ------------------------------------------------------------
consensus_10341#1      ------------------------------------------------------------
                                                                                   

consensus_10341#0      ATGCATATGGAACTTTGGCTACACAAGTGGCTTCAATTGCCCAGAATGAAGGCTTGGGGA 840
consensus_10341#2      ------------------------------------------------------------
consensus_10341#1      --------------------------------------------AATGAAGGCTTGGGGA 16
                                                                                   

consensus_10341#0      AGCGACTTGCTCATGGATACCCATTTTTGGAGGCTGAAGTAGCATACTGTGCTCGCCACG 900
consensus_10341#2      ------------------------------------------------------------
consensus_10341#1      AGCGACTTGCTCATGGATACCCATTTTTGGAGGCTGAAGTAGCATACTGTGCTCGCCACG 76
                                                                                   

consensus_10341#0      AGTACTGTGAATCTGCTGTGGACTTCATTGCAAGGAGATGCCGTCTTGCATTTCTTGACA 960
consensus_10341#2      -------------------------------------------------ATTTCTTGACA 11
consensus_10341#1      AGTACTGTGAATCTGTTGTGGACTTCATTGCAAGGAGATGCCGTCTTGCATTTCTTGACA 136
                                                                        ***********

consensus_10341#0      CAGATGCTGCTGGGAGAGCATTGCCTCGGATCATCGAGATTTTAGCTCTGGAACGCAAGT 1020
consensus_10341#2      CAGATGCTGCTGGGAGAGCATTGCCTCGGATCATCGAGATTTTAGCTCTGGAACGCAAGT 71
consensus_10341#1      CAGATGTTGTTGGGAGAGCATTGCCTCGGATCATAGAGATTTTAGCTCTGGAACGCAAGT 196
                       ****** ** ************************ *************************

consensus_10341#0      GGGACAAGGCAAGGCAGAAGCTTGAACTACAAAAGGGTAAAGATTTCCTGGAAACATTCA 1080
consensus_10341#2      GGGACAAGGCAAGGCAGAAGCTTGAACTACAAAAGGGTAAAGATTTCCTGGAAACATTCA 131
consensus_10341#1      GGGACAAGGCAAGGCAGAAGCTTGAATTACAAAAGGGTAAAGATTTCCTGGAAACATTCA 256
                       ************************** *********************************

consensus_10341#0      AGTCATCCAAGAATGCACAATTCAGGGATGGCAAACATAATGGTCAATGAGTGAAACATA 1140
consensus_10341#2      AATCATCCAAGAATGCACAATTCAGGGATGGCAAACATAATGGTCAATGAGTGAAACATA 191
consensus_10341#1      AGTCATCCAAGAATGCACAATTCAGGGATGGCAAACATAATGGTCAATGAGTGAAACATA 316
                       * **********************************************************

consensus_10341#0      ATTTCTGTGAATAAGCGTGGGTCATACAATAAAAGCAAAGTATGAAACTTAGACAATCAG 1200
consensus_10341#2      ATTTCTGTGAATAAGCGTGAGTCATACAATAAAAGCAAAGTATGAAACTTAGACAATCAG 251
consensus_10341#1      ATTTCTGTGAATAAGCGTGAGTCATACAATAAAAGCAAAGTATGAAACTTAGACAATCAG 376
                       ******************* ****************************************

consensus_10341#0      GCTAGTGCAAGAATAATTCGGTGCAAGAGGGCTGGGGTCCTAAAATGTTCT-CAGTTGT- 1258
consensus_10341#2      GCTAGTGCAAGAATAATTCGGTGCAAGAGGGCTGGGGTCCTAAAATGTTCT-CAGTTGT- 309
consensus_10341#1      GGTAGTGCAAGAATAATTCGGTGCAAGAGGGCTGGGGTCTTAAAATGTTGAGCAGTTGTG 436
                       * ************************************* *********   ******* 

consensus_10341#0      -CCTTTTGTGCACTTTATTACTTCTATCTGATTTGTGGTGAAATAACATCTCATCGGCAT 1317
consensus_10341#2      -CCTTTTGTGCACTTTATTACTTCTATCTGATTTGTGGTGAAATAACATCTCATCGGCAT 368
consensus_10341#1      CCTTCTTGTGCACTTTATTACTTCTATCTGATTTGTGGTGAAATAACATCTCATGGGCAT 496
                        * * ************************************************* *****

consensus_10341#0      GATGTAGATCGATGGATGTACCACGGAAGATTACTCTTTCTA-AAAAGTAATAGAATGGT 1376
consensus_10341#2      GATGTAGATCGATGGATGTACCACGGAAGATTACTCTTTCTA-AAAAGTAATA------C 421
consensus_10341#1      GATGTAGATCGATGGATTTACCACGGAAGATTACTGTTTGTACAAAAGTAATAGAATGGT 556
                       ***************** ***************** *** ** **********       

consensus_10341#0      AGGCCCCATTTTCATATTCATACAAAAAAGGGAATACAATCTTTAGGGAGGGGCCC---- 1432
consensus_10341#2      TCCCTCCGTTCACAATGTAAGTCATTCTAGCATTTCCCATAANAAAAAA----------- 470
consensus_10341#1      AGACCACATTTTCATACTTCGATGGTAGTATTAATGTGCTCTGGGTATGTGTGTTTAGGT 616
                          *  * **  **   *                *    *                    

consensus_10341#0      ------------------------------------------------------------
consensus_10341#2      ------------------------------------------------------------
consensus_10341#1      ATTTGAGTGAATTATATGTAAATGAAGGAAACAAAATCATAGGGGATCATATGGCATGGT 676
                                                                                   

consensus_10341#0      -------------------------------
consensus_10341#2      -------------------------------
consensus_10341#1      TATGGGCGACGTGCCTTATAAGGGTGGTTTC 707
                                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)