These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10343#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2892 fasta sequence [CTGAGCTCTCTCCGTTTCAACTCTTCTCCAAAGGAAAACCCAACATTTCTTCCCTTCTCTCTCTCCAGCTCCGCCTCCTTGTCCTACTCGTCGGCGGCGCTCCAGCTAAACCCTAGTCCCGTCGCCGCCGCCACCGCGGTTCTCCTGCCGGGCCCCGTGATGCCGCTTCTTGATCCAGGAAAGCTGCCTCTTTGGTCACCGAACTGCAGGCAACCACTGGTCCTAACCTGAGCTGCGTCAGCGGTTGGATGGCCTCCCCAGATGCGGTTGTTAGTTGTGAGGCCGCATGAGTTAATGCTCTACTAGGCGCAGCTCCGGAGGCAGCAGAGGGCTTTTGAGAAAGATGGGTTCTTCAGGTTGCTCAGAGATAGTCGAATTGGTGGATGAGTCGAAGGATGCCCGTCCTGGTGGTGTCACCCACCTGAGGGTGAGAGTGAAGCCGGTGGGTCAGGAGCATGGAGCGCGGTCGTGCTCCGTCGAGGATGATCTCGATAGGCTCATTAGATCGATTAATGTGCGCACATCCGCACGGGCTTCTGGGCAGACGAGCACGGATAGGAGGCTTATCGCGCTCGGGAAGTCGCCGATATCGAGCTCGGAGATTGTTGAGTCTGTGAGCCTGAAACAGGCCCTGAGGAAGATGTGCATCTCGCAGGCGTCGGAGATGGCCGCCATGAAGAGGATGCCGAAGCCGACGGCGGTGTCAAATACCCCAGAAGCTGGGGCAATTAAGAAGCTTTATACATCTGTTGTGGTTCAAACCAACAAGGAGCGGGATGAAAAGAATAAGTTTGGAAAAGTGTCCGTTTTGCCTGAGAAGGATGTAATAAGTTCATCGGTGAAGTCAACGGAAGCCAAGAACAAGGTACGGAACAAAAGCCCAGCTAAGAAAAATGTGCGTTCAGCATCTCCAACCACAACAAAGGTCCAGAAAACCAGAATCCAAGATGTGATCAGTAATAAGTCATCTGAGGCAAGTGAAGATTTGCCTGCAGGTCCTGCGGTGGCTAAACAGAGAAAGGGCAAAATGAAAACATCTAGCCCCCGTGCAGTTCCTGTGGGCGGTTCACGCCTGGTGTTCCGGAGTAAAACCTCCACCAAGAAGAAGGTCAAACCAGAACCAGCTGCTGCAGTGGTATCTCACAAGACTTGTGAGGCAAAAAGTTCCAATTCTCAAGCTAATAAGAAGCACGAGGCCCTACAGGATGAACCCAGAACTCCAACACCAATCAACAAGAAGGCTGCGGCTAGCTCTATCAGCACTGATGGAGCTAATTGTGGCACCAAAGGATGTGGTGTTGGTGAGATCCATGGTTCAAAGCCCAGTGAGTTGTCAAGATCGAAGGAAAAGGGTGAATGCTCCCAAAGCTCAAAGAGCAGCATGGGTGATTATAGCACCAGCACAAGCATAAGCGATGATAGTTATGGTAGTTTCAGTGGCAATGGCTGCAGGCCTCACATGTCAAAAGATGTGAGATGGGGGGCCATTAGGCGCATGGCAATCCAACAAGGGAGCCTGGGACTGAAGAACTTCAAGCTTCTCAAACAACTTGGTTGTGGAGATATTGGGACTGTTTATCTAGCTGAATTGGTGGGTTCTGAATGCATGTTCGCATTGAAAGTTATGGATATCGAGTACCTGATAAGTAGAAAGAAGATGCTTCGAGCACAAACTGAGAGGGAGATCCTGCAAATGCTCGACCACCCATTTCTTCCAACTCTGTATTCTTTTTTCACGACCGATAATCTGTCTTGCCTAGTCATGGAGTATTGCCCTGGCGGTGACCTGCATGTTCTACGACAGAAACAGCCTACCAGGACCTTTTCAGAAGCTGCTGCTAGGTTTTATGTTGCTGAAGTTCTCCTAGCATTGGAA-TATCTACATATGTTGGGGGTCATATATCGCGATCTGAAACCAGAAAACATACTTGTTCGTGAAGATGGGCACATTATGCTCTCTGATTTCGATCTGTCCCTGAGGTGCTCAGTAAATCCAATGCTTGTAAGGGCCTCATCAGTAGGAAGAGATGAACCTAGTAGACCTTCTGGCCCTTGTGCGGAAAGCTGCATTGATCCACTCTGTATCCAACCGTCATGGGCCAATTCTTCTTGCTTCACGCCTCGGCTAGTTTCCTCTACCCCTTCCAGGCCACGGCGGCCGAGGGGTGAGCCTCAGAAGAAACCATCACTGCCACAGCTTGTTGTTGAGCCAACTGATGCAAGGTCAAATTCGTTCGTCGGTACCCATGAATATCTTGCACCAGAGATTATCAGAGGAGATGGCCATGGTAGCTCGGTCGACTGGTGGACTCTTGGCATCTTTCTCTATGAATTACTCTATGGCAGGACACCGTTCAGGGGACCCGGCAATGAGGAGACACTGACAAATGTGGTCTCGCAGGGGCTGAAGTTCCCTGATAACCCTGCTGTCAGCTTCCATGCCCGGGATTTGATCAGAGGGTTGCTTGTGAAGGATCCGGAGTACCGGCTAGGCTCAACGAAAGGAGCTGCTGAGATCAAGCGGCATCCCTTC-TTCGAAGGCCTGAACTGGGCATTGATCCGATGGACTGCACCGCCTGAGACTCCGAAAAGCTTCG-ACGCGGCAAGCCTCACGACGGCACGGAAGAAGAAGGAAGGCAAGTGCCTGGAGTTC-AGGCTGAATGGAGACGACATTG-AGTTTGAGCTCTTCTAGTGGTGGTAATAATACTACTTTGTATTC-GGAAGAACATCCATAGCAT-GTAGCTAGAGGTAGT-TTCACTTCCCTGCAG-CTTTCTGTTGGAAATGAGTAAAATCTTGTGTCACCTGCCAATGTTGGGGAAGTGAAGTATGTTCGGCTGTTAAACATGCTACTACTTTATTCCTTGTTAATACCATCAAAATACCAGATTAGCA] [+] EMBL AK065005 [CTGAGCTCTCTCCGTTTCAACTCTTCTCCAAAGGAAAACCCAACATTTCTTCCCTTCTCTCTCTCCAGCTCCGCCTCCTTGTCCTACTCGTCGGCGGCGCTCCAGCTAAACCCTAGTCCCGTCGCCGCCGCCACCGCGGTTCTCCTGCCGGGCCCCGTGATGCCGCTTCTTGATCCAGGAAAGCTGCCTCTTTGGTCACCGAACTGCAGGCAACCACTGGTCCTAACCTGAGCTGCGTCAGCGGTTGGATGGCCTCCCCAGATGCGGTTGTTAGTTGTGAGGCCGCATGAGTTAATGCTCTACTAGGCGCAGCTCCGGAGGCAGCAGAGGGCTTTTGAGAAAGATGGGTTCTTCAGGTTGCTCAGAGATAGTCGAATTGGTGGATGAGTCGAAGGATGCCCGTCCTGGTGGTGTCACCCACCTGAGGGTGAGAGTGAAGCCGGTGGGTCAGGAGCATGGAGCGCGGTCGTGCTCCGTCGAGGATGATCTCGATAGGCTCATTAGATCGATTAATGTGCGCACATCCGCACGGGCTTCTGGGCAGACGAGCACGGATAGGAGGCTTATCGCGCTCGGGAAGTCGCCGATATCGAGCTCGGAGATTGTTGAGTCTGTGAGCCTGAAACAGGCCCTGAGGAAGATGTGCATCTCGCAGGCGTCGGAGATGGCCGCCATGAAGAGGATGCCGAAGCCGACGGCGGTGTCAAATACCCCAGAAGCTGGGGCAATTAAGAAGCTTTATACATCTGTTGTGGTTCAAACCAACAAGGAGCGGGATGAAAAGAATAAGTTTGGAAAAGTGTCCGTTTTGCCTGAGAAGGATGTAATAAGTTCATCGGTGAAGTCAACGGAAGCCAAGAACAAGGTACGGAACAAAAGCCCAGCTAAGAAAAATGTGCGTTCAGCATCTCCAACCACAACAAAGGTCCAGAAAACCAGAATCCAAGATGTGATCAGTAATAAGTCATCTGAGGCAAGTGAAGATTTGCCTGCAGGTCCTGCGGTGGCTAAACAGAGAAAGGGCAAAATGAAAACATCTAGCCCCCGTGCAGTTCCTGTGGGCGGTTCACGCCTGGTGTTCCGGAGTAAAACCTCCACCAAGAAGAAGGTCAAACCAGAACCAGCTGCTGCAGTGGTATCTCACAAGACTTGTGAGGCAAAAAGTTCCAATTCTCAAGCTAATAAGAAGCACGAGGCCCTACAGGATGAACCCAGAACTCCAACACCAATCAACAAGAAGGCTGCGGCTAGCTCTATCAGCACTGATGGAGCTAATTGTGGCACCAAAGGATGTGGTGTTGGTGAGATCCATGGTTCAAAGCCCAGTGAGTTGTCAAGATCGAAGGAAAAGGGTGAATGCTCCCAAAGCTCAAAGAGCAGCATGGGTGATTATAGCACCAGCACAAGCATAAGCGATGATAGTTATGGTAGTTTCAGTGGCAATGGCTGCAGGCCTCACATGTCAAAAGATGTGAGATGGGGGGCCATTAGGCGCATGGCAATCCAACAAGGGAGCCTGGGACTGAAGAACTTCAAGCTTCTCAAACAACTTGGTTGTGGAGATATTGGGACTGTTTATCTAGCTGAATTGGTGGGTTCTGAATGCATGTTCGCATTGAAAGTTATGGATATCGAGTACCTGATAAGTAGAAAGAAGATGCTTCGAGCACAAACTGAGAGGGAGATCCTGCAAATGCTCGACCACCCATTTCTTCCAACTCTGTATTCTTTTTTCACGACCGATAATCTGTCTTGCCTAGTCATGGAGTATTGCCCTGGCGGTGACCTGCATGTTCTACGACAGAAACAGCCTACCAGGACCTTTTCAGAAGCTGCTGCTAGGTTTTATGTTGCTGAAGTTCTCCTAGCATTGGAA TATCTACATATGTTGGGGGTCATATATCGCGATCTGAAACCAGAAAACATACTTGTTCGTGAAGATGGGCACATTATGCTCTCTGATTTCGATCTGTCCCTGAGGTGCTCAGTAAATCCAATGCTTGTAAGGGCCTCATCAGTAGGAAGAGATGAACCTAGTAGACCTTCTGGCCCTTGTGCGGAAAGCTGCATTGATCCACTCTGTATCCAACCGTCATGGGCCAATTCTTCTTGCTTCACGCCTCGGCTAGTTTCCTCTACCCCTTCCAGGCCACGGCGGCCGAGGGGTGAGCCTCAGAAGAAACCATCACTGCCACAGCTTGTTGTTGAGCCAACTGATGCAAGGTCAAATTCGTTCGTCGGTACCCATGAATATCTTGCACCAGAGATTATCAGAGGAGATGGCCATGGTAGCTCGGTCGACTGGTGGACTCTTGGCATCTTTCTCTATGAATTACTCTATGGCAGGACACCGTTCAGGGGACCCGGCAATGAGGAGACACTGACAAATGTGGTCTCGCAGGGGCTGAAGTTCCCTGATAACCCTGCTGTCAGCTTCCATGCCCGGGATTTGATCAGAGGGTTGCTTGTGAAGGATCCGGAGTACCGGCTAGGCTCAACGAAAGGAGCTGCTGAGATCAAGCGGCATCCCTTC TTCGAAGGCCTGAACTGGGCATTGATCCGATGGACTGCACCGCCTGAGACTCCGAAAAGCTTCG ACGCGGCAAGCCTCACGACGGCACGGAAGAAGAAGGAAGGCAAGTGCCTGGAGTTC AGGCTGAATGGAGACGACATTG AGTTTGAGCTCTTCTAGTGGTGGTAATAATACTACTTTGTATTC GGAAGAACATCCATAGCAT GTAGCTAGAGGTAGT TTCACTTCCCTGCAG CTTTCTGTTGGAAATGAGTAAAATCTTGTGTCACCTGCCAATGTTGGGGAAGTGAAGTATGTTCGGCTGTTAAACATGCTACTACTTTATTCCTTGTTAATACCATCAAAATACCAGATTAGCA] [+] EMBL CF196115 [ GAAAGATGGGTTCTTCAGGTTGCTCAGAGATAGTCGAATTGGTGGATGAGTCGAAGGATGCCCGTCCTGGTGGTGTCACCCACCTGAGGGTGAGAGTGAAGCCGGTGGGTCAGGAGCATGGAGCGCGGTCGTGCTCCGTCGAGGATGATCTCGATAGGCTCATTAGATCGATTAATGTGCGCACATCCGCACGGGCTTCTGGGCAGACGAGCACGGATAGGAGGCTTATCGCGCTCGGGAAGTCGCCGATATCGAGCTCGGAGATTGTTGAGTCTGTGAGCCTGAAACAGGCCCTGAGGAAGATGTGCATCTCGCAGGCGTCGGAGATGGCCGCCATGAAGAGGATGCCGAAGCCGACGGCGGTGTCAAATACCCCAGAAGCTGGGGCANTTNNGAAGCNNNATACATCTGTTG ] [+] EMBL CB628868 [ nTACGGAACAAAAGCCCAGCTAAGAAAAATGTGCGTTCAGCATCTCCAACCACAACAAAGGTCCAGAAAACCAGAATCCAAGATGTGATCAGTAATAAGTCATCTGAGGCAAGTGAAGATTTGCCTGCAGGTCCTGCGGTGGCTAAACAGAGAAAGGGCAAAATGAAAACATCTAGCCCCCGTGCAGTTCCTGTGGGCGGTTCACG ] [+] EMBL CF322986 [ AACTTCAAGCTTCTCAAACAACTTGGTTGTGGAGATATTGGGACTGTTTATCTAGCTGAATTGGTGGGTTCTGAATGCATGTTCTCATTGAAAGTTATGGATATCGAGTACCTGATAAGTAGAAAGAAGATGCTTCGAGCACAAACTGAGAGGGAGATCCTGCAAATGCTCGACCACCCATTTCTTCCAACTCTGTATTCTTTTTTCACGACCGATAATCTGTCTTGCCTAGTCATGGAGTATTGCCCTGGCGGTGACCTGCATGTTCTACGACAGAAACAGCCTACCAGGACCTTTTCAGAAGCTGCTGCTAGGTTTTATGTTGCTGAAGTTCTCCTAGCATTGGAANTATCTACATATGTTGGGGGTCATATATCGCGATCTGAAACCAGAAAACATACTTGTTCGTGAAGATGGGCACATTATGCTCTCTGATTTCGATCTGTCCCTGAGGTGCTCAGTAAATCCAATGCTTGTAAGGGCCTCATCAGTAGGAAGAGATGAACCTAGTAGACCTTCTGGCCCTTGTGCGGAAAGCTGCATTGATCCACTCTGTATCCAACCGTCATGGGCCAATTCTTCTTGCTTCACGCCTCGGCTAGTTTCC ] [+] EMBL CA756880 [ AAAACATACTTGTTCGTGAAGATGGGCACATTATGCTCTCTGATTTCGATCTGTCCCTGAGGTGCTCAGTAAATCCAATGCTTGTAAGGGCCTCATCAGTAGGAAGAGATGAACCTAGTAGACCTTCTGGCCCTTGTGCGGAAAGCTGCATTGATCCACTCTGTATCCAACCGTCATGGGCCAATTCTTCTTGCTTCACGCCTCGGCTAGTTTCCTCTACCCCTTCCAGGCCACGGCGGCCGAGGGGTGAGCCTCAGAAGAAACCATCACTGCCACAGCTTGTTGTTGAGCCAACTGATGCAAGGTCAAATTCGTTCGTCGGTACCCATGAATATCTTGCACCAGAGATTATCAGAGGAGATGGCCATGGTAGCTCGGTCGACTGGTGGACTCTTGGCATCTTTCTCTATGAATTACTCTATGGCAGGACACCGTTCAGGGGACCCGGCAATGAGGAGACACTGACAAATGTGGTCTCGCAGGGGCTGAAGTTCCCTGATAACCCTGCTGTCAGCTTCCATGCCCGGGATTTGATCAGAGGGTTGCTTGTGAAAGATTCGGAGTACCGGCTAGGCTCAACAAAAGGAGCTGCTGAGATCAAGCGGCATCCCTTCTTTCAAAGGCCTGAACTGGGCATTGATCCGATGGACTGCACCGCCTGAAACTTCG AAAGCTTTGAACCCGGC AGCCTTACGACGGCACCGGAGAAAAAGG AGGCAAGTGCCTGAAATCCAAGCCTG ATGGGAACAACATTGAAGTTTGAGCTCTTCTAAGGGGGGGAGAAAAACCACTTTTGGTTCGGGAAAAAAATCCTTTCCTTGGTACCTGGAGG GGTNTTC CCTCTCTTCGGTCTTTC ] [-] EMBL CB628869 [ ATTCTTCTTGCTTCACGCCTCGGCTAGTTTCCTCTACCCCTTCCAGGCCACGGCGGCCGAGGGGTGAGCCTCAGAAGAAACCATCACTGCCACAGCTTGTTGTTGAGCCAACTGATGCAAGGTCAAATTCGTTCGTCGGTACCCATGAATATCTTGCACCAGAGATTATCAGAGGAGATGGCCATGGTAGCTCGGTCGACTGGTGGACTCTTGGCATCTTTCTCTATGAATTACTCTATGGCAGGACACCGTTCAGGGGACCCGGCAATGAGGAGACACTGACAAATGTGGTCTCGCAGGGGCTGAAGTTCCCTGATAACCCTGCTGTCAGCTTCCATGCCCGGGATTTGATTAGAGGGTTGCTTGTGAAGGATCCGGAGTACCGGCTAGGCTCAACGAAAGGAGCTGCTGAGATCAAGCGGCATCCCTTC TTCGAAGGCCTGAACTGGGCATTGATCCGATGGACTGCACCGCCTGAGACTCCGAAAAGCTTCG ACGCGGCAAGCCTCACGACGGCACGGAAGAAGAAGGAAGGCAAGTGCCTGGAGTTC AGGCTGAATGGAGACGACATTG AGTTTGAGCTCTTCTAGTGGTGGTAATAATACTACTTTGTATTC GGAAGAACATCCATAGCAT GTAGCTAGAGGTAGT TTCACTTCCCTGCAG CTTTCTGTTGGAAATGAGTAAAATCTTGTGTCACCTGCCAATGTTGGGGAAGTGAAGTATGTTCGGCTGTTAAACCTGCTACTACTTTATTCCTTGTTAATACCATCAAAATACCAGA ] [+] EMBL CA998503 [ ACAGCTTGTTGTTGAGCCAACTGATGCAAGGTCAAATTCGTTCGTCGGTACCCATGAATATCTTGCACCAGAGATTATCAGAGGAGATGGCCATGGTAGCTCGGTCGACTGGTGGACTCTTGGCATCTTTCTCTATGAATTACTCTATGGCAGGACACCGTTCAGGGGACCCGGCAATGAGGAGACACTGACCAATGTGGTCTCGCAGGGGCTGAAGTTCCCTGATAACCCTGCTGTCAGCTTCCATG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||