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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10343#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2892 fasta sequence
[CTGAGCTCTCTCCGTTTCAACTCTTCTCCAAAGGAAAACCCAACATTTCTTCCCTTCTCTCTCTCCAGCTCCGCCTCCTTGTCCTACTCGTCGGCGGCGCTCCAGCTAAACCCTAGTCCCGTCGCCGCCGCCACCGCGGTTCTCCTGCCGGGCCCCGTGATGCCGCTTCTTGATCCAGGAAAGCTGCCTCTTTGGTCACCGAACTGCAGGCAACCACTGGTCCTAACCTGAGCTGCGTCAGCGGTTGGATGGCCTCCCCAGATGCGGTTGTTAGTTGTGAGGCCGCATGAGTTAATGCTCTACTAGGCGCAGCTCCGGAGGCAGCAGAGGGCTTTTGAGAAAGATGGGTTCTTCAGGTTGCTCAGAGATAGTCGAATTGGTGGATGAGTCGAAGGATGCCCGTCCTGGTGGTGTCACCCACCTGAGGGTGAGAGTGAAGCCGGTGGGTCAGGAGCATGGAGCGCGGTCGTGCTCCGTCGAGGATGATCTCGATAGGCTCATTAGATCGATTAATGTGCGCACATCCGCACGGGCTTCTGGGCAGACGAGCACGGATAGGAGGCTTATCGCGCTCGGGAAGTCGCCGATATCGAGCTCGGAGATTGTTGAGTCTGTGAGCCTGAAACAGGCCCTGAGGAAGATGTGCATCTCGCAGGCGTCGGAGATGGCCGCCATGAAGAGGATGCCGAAGCCGACGGCGGTGTCAAATACCCCAGAAGCTGGGGCAATTAAGAAGCTTTATACATCTGTTGTGGTTCAAACCAACAAGGAGCGGGATGAAAAGAATAAGTTTGGAAAAGTGTCCGTTTTGCCTGAGAAGGATGTAATAAGTTCATCGGTGAAGTCAACGGAAGCCAAGAACAAGGTACGGAACAAAAGCCCAGCTAAGAAAAATGTGCGTTCAGCATCTCCAACCACAACAAAGGTCCAGAAAACCAGAATCCAAGATGTGATCAGTAATAAGTCATCTGAGGCAAGTGAAGATTTGCCTGCAGGTCCTGCGGTGGCTAAACAGAGAAAGGGCAAAATGAAAACATCTAGCCCCCGTGCAGTTCCTGTGGGCGGTTCACGCCTGGTGTTCCGGAGTAAAACCTCCACCAAGAAGAAGGTCAAACCAGAACCAGCTGCTGCAGTGGTATCTCACAAGACTTGTGAGGCAAAAAGTTCCAATTCTCAAGCTAATAAGAAGCACGAGGCCCTACAGGATGAACCCAGAACTCCAACACCAATCAACAAGAAGGCTGCGGCTAGCTCTATCAGCACTGATGGAGCTAATTGTGGCACCAAAGGATGTGGTGTTGGTGAGATCCATGGTTCAAAGCCCAGTGAGTTGTCAAGATCGAAGGAAAAGGGTGAATGCTCCCAAAGCTCAAAGAGCAGCATGGGTGATTATAGCACCAGCACAAGCATAAGCGATGATAGTTATGGTAGTTTCAGTGGCAATGGCTGCAGGCCTCACATGTCAAAAGATGTGAGATGGGGGGCCATTAGGCGCATGGCAATCCAACAAGGGAGCCTGGGACTGAAGAACTTCAAGCTTCTCAAACAACTTGGTTGTGGAGATATTGGGACTGTTTATCTAGCTGAATTGGTGGGTTCTGAATGCATGTTCGCATTGAAAGTTATGGATATCGAGTACCTGATAAGTAGAAAGAAGATGCTTCGAGCACAAACTGAGAGGGAGATCCTGCAAATGCTCGACCACCCATTTCTTCCAACTCTGTATTCTTTTTTCACGACCGATAATCTGTCTTGCCTAGTCATGGAGTATTGCCCTGGCGGTGACCTGCATGTTCTACGACAGAAACAGCCTACCAGGACCTTTTCAGAAGCTGCTGCTAGGTTTTATGTTGCTGAAGTTCTCCTAGCATTGGAA-TATCTACATATGTTGGGGGTCATATATCGCGATCTGAAACCAGAAAACATACTTGTTCGTGAAGATGGGCACATTATGCTCTCTGATTTCGATCTGTCCCTGAGGTGCTCAGTAAATCCAATGCTTGTAAGGGCCTCATCAGTAGGAAGAGATGAACCTAGTAGACCTTCTGGCCCTTGTGCGGAAAGCTGCATTGATCCACTCTGTATCCAACCGTCATGGGCCAATTCTTCTTGCTTCACGCCTCGGCTAGTTTCCTCTACCCCTTCCAGGCCACGGCGGCCGAGGGGTGAGCCTCAGAAGAAACCATCACTGCCACAGCTTGTTGTTGAGCCAACTGATGCAAGGTCAAATTCGTTCGTCGGTACCCATGAATATCTTGCACCAGAGATTATCAGAGGAGATGGCCATGGTAGCTCGGTCGACTGGTGGACTCTTGGCATCTTTCTCTATGAATTACTCTATGGCAGGACACCGTTCAGGGGACCCGGCAATGAGGAGACACTGACAAATGTGGTCTCGCAGGGGCTGAAGTTCCCTGATAACCCTGCTGTCAGCTTCCATGCCCGGGATTTGATCAGAGGGTTGCTTGTGAAGGATCCGGAGTACCGGCTAGGCTCAACGAAAGGAGCTGCTGAGATCAAGCGGCATCCCTTC-TTCGAAGGCCTGAACTGGGCATTGATCCGATGGACTGCACCGCCTGAGACTCCGAAAAGCTTCG-ACGCGGCAAGCCTCACGACGGCACGGAAGAAGAAGGAAGGCAAGTGCCTGGAGTTC-AGGCTGAATGGAGACGACATTG-AGTTTGAGCTCTTCTAGTGGTGGTAATAATACTACTTTGTATTC-GGAAGAACATCCATAGCAT-GTAGCTAGAGGTAGT-TTCACTTCCCTGCAG-CTTTCTGTTGGAAATGAGTAAAATCTTGTGTCACCTGCCAATGTTGGGGAAGTGAAGTATGTTCGGCTGTTAAACATGCTACTACTTTATTCCTTGTTAATACCATCAAAATACCAGATTAGCA]
[+] EMBL AK065005 [CTGAGCTCTCTCCGTTTCAACTCTTCTCCAAAGGAAAACCCAACATTTCTTCCCTTCTCTCTCTCCAGCTCCGCCTCCTTGTCCTACTCGTCGGCGGCGCTCCAGCTAAACCCTAGTCCCGTCGCCGCCGCCACCGCGGTTCTCCTGCCGGGCCCCGTGATGCCGCTTCTTGATCCAGGAAAGCTGCCTCTTTGGTCACCGAACTGCAGGCAACCACTGGTCCTAACCTGAGCTGCGTCAGCGGTTGGATGGCCTCCCCAGATGCGGTTGTTAGTTGTGAGGCCGCATGAGTTAATGCTCTACTAGGCGCAGCTCCGGAGGCAGCAGAGGGCTTTTGAGAAAGATGGGTTCTTCAGGTTGCTCAGAGATAGTCGAATTGGTGGATGAGTCGAAGGATGCCCGTCCTGGTGGTGTCACCCACCTGAGGGTGAGAGTGAAGCCGGTGGGTCAGGAGCATGGAGCGCGGTCGTGCTCCGTCGAGGATGATCTCGATAGGCTCATTAGATCGATTAATGTGCGCACATCCGCACGGGCTTCTGGGCAGACGAGCACGGATAGGAGGCTTATCGCGCTCGGGAAGTCGCCGATATCGAGCTCGGAGATTGTTGAGTCTGTGAGCCTGAAACAGGCCCTGAGGAAGATGTGCATCTCGCAGGCGTCGGAGATGGCCGCCATGAAGAGGATGCCGAAGCCGACGGCGGTGTCAAATACCCCAGAAGCTGGGGCAATTAAGAAGCTTTATACATCTGTTGTGGTTCAAACCAACAAGGAGCGGGATGAAAAGAATAAGTTTGGAAAAGTGTCCGTTTTGCCTGAGAAGGATGTAATAAGTTCATCGGTGAAGTCAACGGAAGCCAAGAACAAGGTACGGAACAAAAGCCCAGCTAAGAAAAATGTGCGTTCAGCATCTCCAACCACAACAAAGGTCCAGAAAACCAGAATCCAAGATGTGATCAGTAATAAGTCATCTGAGGCAAGTGAAGATTTGCCTGCAGGTCCTGCGGTGGCTAAACAGAGAAAGGGCAAAATGAAAACATCTAGCCCCCGTGCAGTTCCTGTGGGCGGTTCACGCCTGGTGTTCCGGAGTAAAACCTCCACCAAGAAGAAGGTCAAACCAGAACCAGCTGCTGCAGTGGTATCTCACAAGACTTGTGAGGCAAAAAGTTCCAATTCTCAAGCTAATAAGAAGCACGAGGCCCTACAGGATGAACCCAGAACTCCAACACCAATCAACAAGAAGGCTGCGGCTAGCTCTATCAGCACTGATGGAGCTAATTGTGGCACCAAAGGATGTGGTGTTGGTGAGATCCATGGTTCAAAGCCCAGTGAGTTGTCAAGATCGAAGGAAAAGGGTGAATGCTCCCAAAGCTCAAAGAGCAGCATGGGTGATTATAGCACCAGCACAAGCATAAGCGATGATAGTTATGGTAGTTTCAGTGGCAATGGCTGCAGGCCTCACATGTCAAAAGATGTGAGATGGGGGGCCATTAGGCGCATGGCAATCCAACAAGGGAGCCTGGGACTGAAGAACTTCAAGCTTCTCAAACAACTTGGTTGTGGAGATATTGGGACTGTTTATCTAGCTGAATTGGTGGGTTCTGAATGCATGTTCGCATTGAAAGTTATGGATATCGAGTACCTGATAAGTAGAAAGAAGATGCTTCGAGCACAAACTGAGAGGGAGATCCTGCAAATGCTCGACCACCCATTTCTTCCAACTCTGTATTCTTTTTTCACGACCGATAATCTGTCTTGCCTAGTCATGGAGTATTGCCCTGGCGGTGACCTGCATGTTCTACGACAGAAACAGCCTACCAGGACCTTTTCAGAAGCTGCTGCTAGGTTTTATGTTGCTGAAGTTCTCCTAGCATTGGAA TATCTACATATGTTGGGGGTCATATATCGCGATCTGAAACCAGAAAACATACTTGTTCGTGAAGATGGGCACATTATGCTCTCTGATTTCGATCTGTCCCTGAGGTGCTCAGTAAATCCAATGCTTGTAAGGGCCTCATCAGTAGGAAGAGATGAACCTAGTAGACCTTCTGGCCCTTGTGCGGAAAGCTGCATTGATCCACTCTGTATCCAACCGTCATGGGCCAATTCTTCTTGCTTCACGCCTCGGCTAGTTTCCTCTACCCCTTCCAGGCCACGGCGGCCGAGGGGTGAGCCTCAGAAGAAACCATCACTGCCACAGCTTGTTGTTGAGCCAACTGATGCAAGGTCAAATTCGTTCGTCGGTACCCATGAATATCTTGCACCAGAGATTATCAGAGGAGATGGCCATGGTAGCTCGGTCGACTGGTGGACTCTTGGCATCTTTCTCTATGAATTACTCTATGGCAGGACACCGTTCAGGGGACCCGGCAATGAGGAGACACTGACAAATGTGGTCTCGCAGGGGCTGAAGTTCCCTGATAACCCTGCTGTCAGCTTCCATGCCCGGGATTTGATCAGAGGGTTGCTTGTGAAGGATCCGGAGTACCGGCTAGGCTCAACGAAAGGAGCTGCTGAGATCAAGCGGCATCCCTTC TTCGAAGGCCTGAACTGGGCATTGATCCGATGGACTGCACCGCCTGAGACTCCGAAAAGCTTCG ACGCGGCAAGCCTCACGACGGCACGGAAGAAGAAGGAAGGCAAGTGCCTGGAGTTC AGGCTGAATGGAGACGACATTG AGTTTGAGCTCTTCTAGTGGTGGTAATAATACTACTTTGTATTC GGAAGAACATCCATAGCAT GTAGCTAGAGGTAGT TTCACTTCCCTGCAG CTTTCTGTTGGAAATGAGTAAAATCTTGTGTCACCTGCCAATGTTGGGGAAGTGAAGTATGTTCGGCTGTTAAACATGCTACTACTTTATTCCTTGTTAATACCATCAAAATACCAGATTAGCA]
[+] EMBL CF196115 [ GAAAGATGGGTTCTTCAGGTTGCTCAGAGATAGTCGAATTGGTGGATGAGTCGAAGGATGCCCGTCCTGGTGGTGTCACCCACCTGAGGGTGAGAGTGAAGCCGGTGGGTCAGGAGCATGGAGCGCGGTCGTGCTCCGTCGAGGATGATCTCGATAGGCTCATTAGATCGATTAATGTGCGCACATCCGCACGGGCTTCTGGGCAGACGAGCACGGATAGGAGGCTTATCGCGCTCGGGAAGTCGCCGATATCGAGCTCGGAGATTGTTGAGTCTGTGAGCCTGAAACAGGCCCTGAGGAAGATGTGCATCTCGCAGGCGTCGGAGATGGCCGCCATGAAGAGGATGCCGAAGCCGACGGCGGTGTCAAATACCCCAGAAGCTGGGGCANTTNNGAAGCNNNATACATCTGTTG ]
[+] EMBL CB628868 [ nTACGGAACAAAAGCCCAGCTAAGAAAAATGTGCGTTCAGCATCTCCAACCACAACAAAGGTCCAGAAAACCAGAATCCAAGATGTGATCAGTAATAAGTCATCTGAGGCAAGTGAAGATTTGCCTGCAGGTCCTGCGGTGGCTAAACAGAGAAAGGGCAAAATGAAAACATCTAGCCCCCGTGCAGTTCCTGTGGGCGGTTCACG ]
[+] EMBL CF322986 [ AACTTCAAGCTTCTCAAACAACTTGGTTGTGGAGATATTGGGACTGTTTATCTAGCTGAATTGGTGGGTTCTGAATGCATGTTCTCATTGAAAGTTATGGATATCGAGTACCTGATAAGTAGAAAGAAGATGCTTCGAGCACAAACTGAGAGGGAGATCCTGCAAATGCTCGACCACCCATTTCTTCCAACTCTGTATTCTTTTTTCACGACCGATAATCTGTCTTGCCTAGTCATGGAGTATTGCCCTGGCGGTGACCTGCATGTTCTACGACAGAAACAGCCTACCAGGACCTTTTCAGAAGCTGCTGCTAGGTTTTATGTTGCTGAAGTTCTCCTAGCATTGGAANTATCTACATATGTTGGGGGTCATATATCGCGATCTGAAACCAGAAAACATACTTGTTCGTGAAGATGGGCACATTATGCTCTCTGATTTCGATCTGTCCCTGAGGTGCTCAGTAAATCCAATGCTTGTAAGGGCCTCATCAGTAGGAAGAGATGAACCTAGTAGACCTTCTGGCCCTTGTGCGGAAAGCTGCATTGATCCACTCTGTATCCAACCGTCATGGGCCAATTCTTCTTGCTTCACGCCTCGGCTAGTTTCC ]
[+] EMBL CA756880 [ AAAACATACTTGTTCGTGAAGATGGGCACATTATGCTCTCTGATTTCGATCTGTCCCTGAGGTGCTCAGTAAATCCAATGCTTGTAAGGGCCTCATCAGTAGGAAGAGATGAACCTAGTAGACCTTCTGGCCCTTGTGCGGAAAGCTGCATTGATCCACTCTGTATCCAACCGTCATGGGCCAATTCTTCTTGCTTCACGCCTCGGCTAGTTTCCTCTACCCCTTCCAGGCCACGGCGGCCGAGGGGTGAGCCTCAGAAGAAACCATCACTGCCACAGCTTGTTGTTGAGCCAACTGATGCAAGGTCAAATTCGTTCGTCGGTACCCATGAATATCTTGCACCAGAGATTATCAGAGGAGATGGCCATGGTAGCTCGGTCGACTGGTGGACTCTTGGCATCTTTCTCTATGAATTACTCTATGGCAGGACACCGTTCAGGGGACCCGGCAATGAGGAGACACTGACAAATGTGGTCTCGCAGGGGCTGAAGTTCCCTGATAACCCTGCTGTCAGCTTCCATGCCCGGGATTTGATCAGAGGGTTGCTTGTGAAAGATTCGGAGTACCGGCTAGGCTCAACAAAAGGAGCTGCTGAGATCAAGCGGCATCCCTTCTTTCAAAGGCCTGAACTGGGCATTGATCCGATGGACTGCACCGCCTGAAACTTCG AAAGCTTTGAACCCGGC AGCCTTACGACGGCACCGGAGAAAAAGG AGGCAAGTGCCTGAAATCCAAGCCTG ATGGGAACAACATTGAAGTTTGAGCTCTTCTAAGGGGGGGAGAAAAACCACTTTTGGTTCGGGAAAAAAATCCTTTCCTTGGTACCTGGAGG GGTNTTC CCTCTCTTCGGTCTTTC ]
[-] EMBL CB628869 [ ATTCTTCTTGCTTCACGCCTCGGCTAGTTTCCTCTACCCCTTCCAGGCCACGGCGGCCGAGGGGTGAGCCTCAGAAGAAACCATCACTGCCACAGCTTGTTGTTGAGCCAACTGATGCAAGGTCAAATTCGTTCGTCGGTACCCATGAATATCTTGCACCAGAGATTATCAGAGGAGATGGCCATGGTAGCTCGGTCGACTGGTGGACTCTTGGCATCTTTCTCTATGAATTACTCTATGGCAGGACACCGTTCAGGGGACCCGGCAATGAGGAGACACTGACAAATGTGGTCTCGCAGGGGCTGAAGTTCCCTGATAACCCTGCTGTCAGCTTCCATGCCCGGGATTTGATTAGAGGGTTGCTTGTGAAGGATCCGGAGTACCGGCTAGGCTCAACGAAAGGAGCTGCTGAGATCAAGCGGCATCCCTTC TTCGAAGGCCTGAACTGGGCATTGATCCGATGGACTGCACCGCCTGAGACTCCGAAAAGCTTCG ACGCGGCAAGCCTCACGACGGCACGGAAGAAGAAGGAAGGCAAGTGCCTGGAGTTC AGGCTGAATGGAGACGACATTG AGTTTGAGCTCTTCTAGTGGTGGTAATAATACTACTTTGTATTC GGAAGAACATCCATAGCAT GTAGCTAGAGGTAGT TTCACTTCCCTGCAG CTTTCTGTTGGAAATGAGTAAAATCTTGTGTCACCTGCCAATGTTGGGGAAGTGAAGTATGTTCGGCTGTTAAACCTGCTACTACTTTATTCCTTGTTAATACCATCAAAATACCAGA ]
[+] EMBL CA998503 [ ACAGCTTGTTGTTGAGCCAACTGATGCAAGGTCAAATTCGTTCGTCGGTACCCATGAATATCTTGCACCAGAGATTATCAGAGGAGATGGCCATGGTAGCTCGGTCGACTGGTGGACTCTTGGCATCTTTCTCTATGAATTACTCTATGGCAGGACACCGTTCAGGGGACCCGGCAATGAGGAGACACTGACCAATGTGGTCTCGCAGGGGCTGAAGTTCCCTGATAACCCTGCTGTCAGCTTCCATG ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||