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Oryza sativa
cluster # 10346 cluster # 10346       Sequences # 7       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10346#0 length = 2070 sequences # 6  
consensus_10346#1 length = 457 sequences # 1  

consensusID : consensus_10346#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2070
fasta sequence
                              [GCAGCAGGTTTCTCAAAATGACCAAGTATCTGCTGCAGTCATGGATACTGAATCAATACACAGGGATCCTGTTGAGAGGCAAGCTGCATCTTCAACTGGCCACATGCCAGCTGCCATCACAGACAGTGAACCATCAGAAAATGAGCCTGATGATCTGTATATGCCTTCTCCAGATCAGAGTTTGTCTAACTCTCCAGATATCGACAGAATCATTAACAGCATATGCCCTAGTTCATCCCCTAGGCATATGACCCCTGAAAAAGTCTCTAATGAGTTTGACAACGTCCAGTTAACTACACCACCACCTTCCGATATCGACATGTCTGATCCTGAGCATTTTGCATGTAACTACGTTCCGCAGGAAGTTAGAAAGGCCCTTGCGAAGCTAAGATCTAGTAATTCATCATTTGAGCGTGCGATGTCACAGGCAAGTTCTGGTGATGTGCATGCATTAAGTGATTCTGAAGATTGCGACGAACGCTGGAATGTTGGTACCAAGAGGAATCAAGGGTGTGGTCGTGGTCGTGGTCTTACACTCTGTCTCAAGGTGTGGAATTTGGCTAAGGGTGTCCGCATTCCAGTGCTATTGAACGCTTCGGGGGAGCCTGTTGGGAAAGAGGCAGGCACCTTATCTACCTTTCTGGGTGCATTAGCACGTGACGGAATATTGGCACCTCTGACACATCAAGATTGGAGACGTGTTCCAGAGAAAAACAAGGATGTGATGTATCATATTGTCAAGCTCAAATTTGACATTGCTCCAGCTGCTGAATTCTGGATCATGAAGTGTATAGGAAGAAAGTGGAAGAGTTGGAAAGCTCTCTTAAAACAAAAACATTATGATACTCATGAAACGGTGGAGGAATGCCTTGCTGATCAAAATCCTCGCGTTCTCAAGGAACAGTGGCAATATTTAGTTGCATATTGGGGTACGGAAAAAGCGAAGGCTGTGAGTAGTCGAAATAAAGCTTGTCGGGCAAATGTAACCGCTACGCATACTGCAGGAACAAAGAGCTTTGCACGGATAATTGAGGAGGAGAAGCAGAAGCGGCCTAACAATGAGGAGCCCACTGCTGCGGATTTGTTCCTATTGACTCATACACACAGAAACGGGAAGCCTATGAAGAAGGAAAAAGCTGATATCATTGCACGAGTCCGTGAACAATCTCATAAGCAAGCCGAATGCTCAGGAAGTGACTCTGCAGCACACAAAGTCGGACTTGAATCCTGCTCCATTGGCCTGCGTGGGAAGAGGGGTCATCGTCGGAAGGCAGTCTTGCAGGCATCCTTCAAGGAAGCTGAGGAGGCTAAAAGAAAGGCTGAAGACGAGGCAGCGACGCTGAGGAAGAAGATGGTGGCAATGGAAGAAAGTCAGAAGAAACTGCAAGAGGATTTGGCGAATATGAAGAGTACAGTTAGTGCTATGCAGAAGACGACGTCAACTGGTGACCTATCGGATGGTCAAACGCAAAACTTTCCACAGGTCCAAAATTCACGAAGCGCTCATGAGATTTTGCAGCCATATCTTGACTACTCTGCACTGTACGATCCTTCTGCCTCCCCTAGTCCACGATTTCGATGATAATCGCACCACAGACAATGCCAATATGCATGGTTGATTCCATCTTGATCGTGGAATGGTGTATGAAACGAAGAGGTTTAGACGTTTAGTTGGCCGTTCATGTGTAATGTTGGCTCTCTAAACCCGGAGCCCAGTGCTTGTACTCTTCTGTTTTATTGGCTACTGTAACAGGATACTCTCTTCTGTTTTGTTTACACTGACTAGAACTACTTCACTTCGCATTTCCCTTCCTGTGAAATGATTTTGGGCGTGTTTAGTGAAGCTTGAGATTCTGAGAAGCAGTTAATTGGTAGCCAGTTTCTGAGAATATAGAAAAGTTGGGTTTCTCAGCTTCTGCCTTCGAGCTTATAGTTCATTTTCTGGATTCTATATCTACAACTTCTCAGAATCTGTACCAAAACATAGACTATTTAAGGGAGCTTTTGGTTATGGGAGAAGTTGCAGCAGCTAGAAACTCCCCCAAACATACTCTCTATAGGGTTATACCT]

[+] EMBL AK065814             [GCAGCAGGTTTCTCAAAATGACCAAGTATCTGCTGCAGTCATGGATACTGAATCAATACACAGGGATCCTGTTGAGAGGCAAGCTGCATCTTCAACTGGCCACATGCCAGCTGCCATCACAGACAGTGAACCATCAGAAAATGAGCCTGATGATCTGTATATGCCTTCTCCAGATCAGAGTTTGTCTAACTCTCCAGATATCGACAGAATCATTAACAGCATATGCCCTAGTTCATCCCCTAGGCATATGACCCCTGAAAAAGTCTCTAATGAGTTTGACAACGTCCAGTTAACTACACCACCACCTTCCGATATCGACATGTCTGATCCTGAGCATTTTGCATGTAACTACGTTCCGCAGGAAGTTAGAAAGGCCCTTGCGAAGCTAAGATCTAGTAATTCATCATTTGAGCGTGCGATGTCACAGGCAAGTTCTGGTGATGTGCATGCATTAAGTGATTCTGAAGATTGCGACGAACGCTGGAATGTTGGTACCAAGAGGAATCAAGGGTGTGGTCGTGGTCGTGGTCTTACACTCTGTCTCAAGGTGTGGAATTTGGCTAAGGGTGTCCGCATTCCAGTGCTATTGAACGCTTCGGGGGAGCCTGTTGGGAAAGAGGCAGGCACCTTATCTACCTTTCTGGGTGCATTAGCACGTGACGGAATATTGGCACCTCTGACACATCAAGATTGGAGACGTGTTCCAGAGAAAAACAAGGATGTGATGTATCATATTGTCAAGCTCAAATTTGACATTGCTCCAGCTGCTGAATTCTGGATCATGAAGTGTATAGGAAGAAAGTGGAAGAGTTGGAAAGCTCTCTTAAAACAAAAACATTATGATACTCATGAAACGGTGGAGGAATGCCTTGCTGATCAAAATCCTCGCGTTCTCAAGGAACAGTGGCAATATTTAGTTGCATATTGGGGTACGGAAAAAGCGAAGGCTGTGAGTAGTCGAAATAAAGCTTGTCGGGCAAATGTAACCGCTACGCATACTGCAGGAACAAAGAGCTTTGCACGGATAATTGAGGAGGAGAAGCAGAAGCGGCCTAACAATGAGGAGCCCACTGCTGCGGATTTGTTCCTATTGACTCATACACACAGAAACGGGAAGCCTATGAAGAAGGAAAAAGCTGATATCATTGCACGAGTCCGTGAACAATCTCATAAGCAAGCCGAATGCTCAGGAAGTGACTCTGCAGCACACAAAGTCGGACTTGAATCCTGCTCCATTGGCCTGCGTGGGAAGAGGGGTCATCGTCGGAAGGCAGTCTTGCAGGCATCCTTCAAGGAAGCTGAGGAGGCTAAAAGAAAGGCTGAAGACGAGGCAGCGACGCTGAGGAAGAAGATGGTGGCAATGGAAGAAAGTCAGAAGAAACTGCAAGAGGATTTGGCGAATATGAAGAGTACAGTTAGTGCTATGCAGAAGACGACGTCAACTGGTGACCTATCGGATGGTCAAACGCAAAACTTTCCACAGGTCCAAAATTCACGAAGCGCTCATGAGATTTTGCAGCCATATCTTGACTACTCTGCACTGTACGATCCTTCTGCCTCCCCTAGTCCACGATTTCGATGATAATCGCACCACAGACAATGCCAATATGCATGGTTGATTCCATCTTGATCGTGGAATGGTGTATGAAACGAAGAGGTTTAGACGTTTAGTTGGCCGTTCATGTGTAATGTTGGCTCTCTAAACCCGGAGCCCAGTGCTTGTACTCTTCTGTTTTATTGGCTACTGTAACAGGATACTCTCTTCTGTTTTGTTTACACTGACTAGAACTAC                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB637418             [GCAGCAGGTTTCTCAAAATGACCAAGTATCTGCTGCAGTCATGGATACTGAATCAATACACAGGGATCCTGTTGAGAGGCAAGCTGCATCTTCAACTGGCCACATGCCAGCTGCCATCACAGACAGTGAACCATCAGAAAATGAGCCTGATGATCTGTATATGCCTTCTCCAGATCAGAGTTTGTCTAACTCTCCAGATATCGACAGAATCATTAACAGCATATGCCCTAGTTCATCCCCTAGGCATATGACCCCTGAAAAAGTCTCTAATGAGTTTGACAACGTCCAGTTAACTACACCACCACCTTCCGATATCGACATGTCTGATCCTGAGCATTTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK060380             [                                                                                                                                AACCATCAGAAAATGAGCCTGATGATCTGTATATGCCTTCTCCAGATCAGAGTTTGTCTAACTCTCCAGATATCGACAGAATCATTAACAGCATATGCCCTAGTTCATCCCCTAGGCATATGACCCCTGAAAAAGTCTCTAATGAGTTTGACAACGTCCAGTTAACTACACCACCACCTTCCGATATCGACATGTCTGATCCTGAGCATTTTGCATGTAACTACGTTCCGCAGGAAGTTAGAAAGGCCCTTGCGAAGCTAAGATCTAGTAATTCATCATTTGAGCGTGCGATGTCACAGGCAAGTTCTGGTGATGTGCATGCATTAAGTGATTCTGAAGATTGCGACGAACGCTGGAATGTTGGTACCAAGAGGAATCAGGGGTGTGGTCGTGGTCGTGGTCTTACACTCTGTCTCAAGGTGTGGAATTTGCCTAAGGGTGTCCGCATTCCAGTGCTATTGAACGCTTCGGGGGAGCCTGTTGGGAAAGAGGCAGGCACCTTATCTACCTTTCTGGGTGCATTAGCACGTGACGGAATATTGGCACCTCTGACACATCAAGATTGGAGACGTGTTCCAGAGAAAAACAAGGATGTGATGTATCATATTGTCAAGCTCAAATTTGACATTGCTCCAGCTGCTGAATTCTGGATCATGAAGTGTATAGGAAGAAAGTGGAAGAGTTGGAAAGCTCTCTTAAAACAAAAACATTATGATACTCATGAAACGGTGGAGGAATGCCTTGCTGATCAAAATCCTCGCGTTCTCAAGGAACAGTGGCAATATTTAGTTGCATATTGGGGTACGGAAAAAGCGAAGGCTGTGAGTAGTCGAAATAAAGCTTGTCGGGCAAATGTAACCGCTACGCATACTGCAGGAACAAAGAGCTTTGCACGGATAATTGAGGAGGAGAAGCAGAAGCGGCCTAACAATGAGGAGCCCACTGCTGCGGATTTGTTCCTATTGACTCATACACACAGAAACGGGAAGCCTATGAAGAAGGAAAAAGCTGATATCATTGCACGAGTCCGTGAACAATCTCATAAGCAAGCCGAATGCTCAGGAAGTGACTCTGCAGCACACAAAGTCGGACTTGAATCCTGCTCCATTGGCCTGCGTGGGAAGAGGGGTCATCGTCGGAAGGCAGTCTTGCAGGCATCCTTCAAGGAAGCTGAGGAGGCTAAAAGAAAGGCTGAAGACGAGGCAGCGACGCTGAGGAAGAAGATGGTGGCAATGGAAGAAAGTCAGAAGAAACTGCAAGAGGATTTGGCGAATATGAAGAGTACAGTTAGTGCTATGCAGAAGGCGACGTCAACTGGTGACCTATCGGATGGTCAAACGCAAAACTTTCCACAGGTCCAAAATTCACGAAGCGCTCATGAGATTTTGCAGCCATATCTTGACTACTCTGCACTGTACGATCCTTCTGCCTCCCCTAGTCCACGATTTCGATGATAATCGCACCACAGACAATGCCAATATGCATGGTTGATTCCATCTTGATCGTGGAATGGTGTATGAAACGAAGAGGTTTAGACGTTTAGTTGGCCGTTCATGTGTAATGTTGGCTCTCTAAACCCGGAGCCCAGTGCTTGTACTCTTCTGTTTTATTGGCTACTGTAACAGGATACTCTCTTCTGTTTTGTTTACACTGACTAGAACTACTTCACTTCGCATTTCCCTTCCTGTGAAATGATTTTGGGCGTGTTTAGTGAAGCTTGAGATTCTGAGAAGCAGTTAATTGGTAGCCAGTTTCTGAGAATATAGAAAAGTTGGGTTTCTCAGCTTCTGCCTTCGAGCTTATAGTTCATTTTCTGGATTCTATATCTACAACTTCTCAGAATCTGTACCAAAACATAGACTATTTAAGGGAGCTTTTGGTTATGGGAGAAGTTGCAGCAGCTAGAAACTCCCCCAAACATACTCTCTATAGGGTTATACCT]
[+] EMBL CF323834             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TCCGCATTCCAGTGCTATTGAACGCTTCGGGGGAGCCTGTTGGGAAAGAGGCAGGCACCTTATCTACCTTTCTGGGTGCATTAGCACGTGACGGAATATTGGCACCTCTGACACATCAAGATTGGAGACGTGTTCCAGAGAAAAACAAGGATGTGATGTATCATATTGTCAAGCTCAAATTTGACATTGCTCCAGCTGCTGAATTCTGGATCATGAAGTGTATAGGAAGAAAGTGGAAGAGTTGGAAAGCTCTCTTAAAACAAAAACATTATGATACTCATGAAACGGTGGAGGAATGCCTTGCTGATCAAAATCCTCGCGTTCTCAAGGAACAGTGGCAATATTTAGTTGCATATTGGGGTACGGAAAAAGCGAAGGCTGTGAGTAGTCGAAATAAAGCTTGTCGGGCAAATGTAACCGCTACGCATACTGCAGGAACAAAGAGCTTTGCACGGATAATTGAGGAGGAGAAGCAGAAGCGGCCTAACAATGAGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB664223             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ATATCATTGCACGAGTCCGTGAACAATCTCATAAGCAAGCCGAATGCTCAGGAAGTGACTCTGCAGCACACAAAGTCGGACTTGAATCCTGCTCCATTGGCCTGCGTGGGAAGAGGGGTCATCGTCGGAAGGCAGTCTTGCAGGCATCCTTCAAGGAAGCTGAGGAGGCTAAAAGAAAGGCTGAAGACGAGGCAGCGACGCTGAGGAAGAAGATGGTGGCAATGGAAGAAAGTCAGAAGAAACTGCAAGAGGATTTGGCGAATATGAAGAGTCCAGTTAGTGCTATGCAGAAGACGACGTCAACTGGTGACCTATCGGATGGTCAAACGCAAAACTTTCCACAGGTCCAAAATTCACGAAGCGCTCATGAGATTTTGCAGCCATATCTTGACTACTCTGCACTGTACGATCCTTCTGCCTCCCCTAGTCCACGATTTCGATGATAATCGCACCACAGACAATGCCAATATGCATGGTTGATTCCATCTTGATCGTGGAATGGTGTATGAAACGAAGAGGTTTAGACGTTTAGTTGGCCGTTCATGTGTAATGTTGGCTCTCTAAACCCGGAGCCCAGTGCTGGTACTCTTCTGTTTTATTGGCTACTGTAACAGGATACTCTCTTCTGTTTTGTTTACACTGACTAGAACTACTTCACTTCGCAT                                                                                                                                                                                                                                                                          ]
[-] EMBL CB637419             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GTCGGACTTGAATCCTGCTCCATTGGCCTGCGTGGGAAGAGGGGTCATCGTCGGAAGGCAGTCTTGCAGGCATCCTTCAAGGAAGCTGAGGAGGCTAAAAGAAAGGCTGAAGACGAGGCAGCGACGCTGAGGAAGAAGATGGTGGCAATGGAAGAAAGTCAGAAGAAACTGCAAGAGGATTTGGCGAATATGAAGAGTACAGTTAGTGCTATGCAGAAGACGACGTCAACTGGTGACCTATCGGATGGTCAAACGCAAAACTTTCCACAGGTCCAAAATTCACGAAGCGCTCATGAGATTTTGCAGCCATATCTTGACTACTCTGCACTGTACGATCCTTCTGCCTCCCCTAGTCCACGATTTCGATGATAATCGCACCACAGACAATGCCAATATGCATGGTTGATTCCATCTTGATCGTGGAATGGTGTATGAAACGAAGAGGTTTAGACGTTTAGTTGGCCGTTCATGTGTAATGTTGGCTCTCTAAACCCGGAGCCCAGTGCTTGTACTCTTCTGTTTTATTGGCTACTGTAACAGGATACTCTCTTNTGTTTTGTTTACACTGACTAGAACTACT                                                                                                                                                                                                                                                                                     ]


>consensus_10346#0 GCAGCAGGTTTCTCAAAATGACCAAGTATCTGCTGCAGTCATGGATACTGAATCAATACA CAGGGATCCTGTTGAGAGGCAAGCTGCATCTTCAACTGGCCACATGCCAGCTGCCATCAC AGACAGTGAACCATCAGAAAATGAGCCTGATGATCTGTATATGCCTTCTCCAGATCAGAG TTTGTCTAACTCTCCAGATATCGACAGAATCATTAACAGCATATGCCCTAGTTCATCCCC TAGGCATATGACCCCTGAAAAAGTCTCTAATGAGTTTGACAACGTCCAGTTAACTACACC ACCACCTTCCGATATCGACATGTCTGATCCTGAGCATTTTGCATGTAACTACGTTCCGCA GGAAGTTAGAAAGGCCCTTGCGAAGCTAAGATCTAGTAATTCATCATTTGAGCGTGCGAT GTCACAGGCAAGTTCTGGTGATGTGCATGCATTAAGTGATTCTGAAGATTGCGACGAACG CTGGAATGTTGGTACCAAGAGGAATCAAGGGTGTGGTCGTGGTCGTGGTCTTACACTCTG TCTCAAGGTGTGGAATTTGGCTAAGGGTGTCCGCATTCCAGTGCTATTGAACGCTTCGGG GGAGCCTGTTGGGAAAGAGGCAGGCACCTTATCTACCTTTCTGGGTGCATTAGCACGTGA CGGAATATTGGCACCTCTGACACATCAAGATTGGAGACGTGTTCCAGAGAAAAACAAGGA TGTGATGTATCATATTGTCAAGCTCAAATTTGACATTGCTCCAGCTGCTGAATTCTGGAT CATGAAGTGTATAGGAAGAAAGTGGAAGAGTTGGAAAGCTCTCTTAAAACAAAAACATTA TGATACTCATGAAACGGTGGAGGAATGCCTTGCTGATCAAAATCCTCGCGTTCTCAAGGA ACAGTGGCAATATTTAGTTGCATATTGGGGTACGGAAAAAGCGAAGGCTGTGAGTAGTCG AAATAAAGCTTGTCGGGCAAATGTAACCGCTACGCATACTGCAGGAACAAAGAGCTTTGC ACGGATAATTGAGGAGGAGAAGCAGAAGCGGCCTAACAATGAGGAGCCCACTGCTGCGGA TTTGTTCCTATTGACTCATACACACAGAAACGGGAAGCCTATGAAGAAGGAAAAAGCTGA TATCATTGCACGAGTCCGTGAACAATCTCATAAGCAAGCCGAATGCTCAGGAAGTGACTC TGCAGCACACAAAGTCGGACTTGAATCCTGCTCCATTGGCCTGCGTGGGAAGAGGGGTCA TCGTCGGAAGGCAGTCTTGCAGGCATCCTTCAAGGAAGCTGAGGAGGCTAAAAGAAAGGC TGAAGACGAGGCAGCGACGCTGAGGAAGAAGATGGTGGCAATGGAAGAAAGTCAGAAGAA ACTGCAAGAGGATTTGGCGAATATGAAGAGTACAGTTAGTGCTATGCAGAAGACGACGTC AACTGGTGACCTATCGGATGGTCAAACGCAAAACTTTCCACAGGTCCAAAATTCACGAAG CGCTCATGAGATTTTGCAGCCATATCTTGACTACTCTGCACTGTACGATCCTTCTGCCTC CCCTAGTCCACGATTTCGATGATAATCGCACCACAGACAATGCCAATATGCATGGTTGAT TCCATCTTGATCGTGGAATGGTGTATGAAACGAAGAGGTTTAGACGTTTAGTTGGCCGTT CATGTGTAATGTTGGCTCTCTAAACCCGGAGCCCAGTGCTTGTACTCTTCTGTTTTATTG GCTACTGTAACAGGATACTCTCTTCTGTTTTGTTTACACTGACTAGAACTACTTCACTTC GCATTTCCCTTCCTGTGAAATGATTTTGGGCGTGTTTAGTGAAGCTTGAGATTCTGAGAA GCAGTTAATTGGTAGCCAGTTTCTGAGAATATAGAAAAGTTGGGTTTCTCAGCTTCTGCC TTCGAGCTTATAGTTCATTTTCTGGATTCTATATCTACAACTTCTCAGAATCTGTACCAA AACATAGACTATTTAAGGGAGCTTTTGGTTATGGGAGAAGTTGCAGCAGCTAGAAACTCC CCCAAACATACTCTCTATAGGGTTATACCT



consensusID : consensus_10346#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 457
fasta sequence
                              [AGAGGATTTGGCGAATATGAAGAGTACAGTTAGTGCTATGCAGAAGACGACGTCAACTGGTGACCTATCGGAGGGTCAAACGCAAAACTTTCCACAGGTCCAAAATTCACGAAGCGCTCATGAGATTTTGCAGCCATATCTTGACTACTTTGCACTGTACGATCCTTCTGCCTCCCCTAGTCCACGATTTCGATGATAATCGCACCACAGACAATGCCAATATGCATGGTTGATTCCATCTTGATCGTGGAATGGTGTATGAAACGAAGAGGTTTAGACGTTTAGTTGCCCGTTCATGTGTAATGTTGGCTCTCTAAACCCGGAGCCCAGTGCTTGTACTCTTCTGTTTTATTGGCTACTGTAACAGAAAAATATCTTCTGTTTTGTTTACACTGACTAGAACTACTTCACTTCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGACTAGT]

[-] EMBL CF322989             [AGAGGATTTGGCGAATATGAAGAGTACAGTTAGTGCTATGCAGAAGACGACGTCAACTGGTGACCTATCGGAGGGTCAAACGCAAAACTTTCCACAGGTCCAAAATTCACGAAGCGCTCATGAGATTTTGCAGCCATATCTTGACTACTTTGCACTGTACGATCCTTCTGCCTCCCCTAGTCCACGATTTCGATGATAATCGCACCACAGACAATGCCAATATGCATGGTTGATTCCATCTTGATCGTGGAATGGTGTATGAAACGAAGAGGTTTAGACGTTTAGTTGCCCGTTCATGTGTAATGTTGGCTCTCTAAACCCGGAGCCCAGTGCTTGTACTCTTCTGTTTTATTGGCTACTGTAACAGAAAAATATCTTCTGTTTTGTTTACACTGACTAGAACTACTTCACTTCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGACTAGT]


>consensus_10346#1 AGAGGATTTGGCGAATATGAAGAGTACAGTTAGTGCTATGCAGAAGACGACGTCAACTGG TGACCTATCGGAGGGTCAAACGCAAAACTTTCCACAGGTCCAAAATTCACGAAGCGCTCA TGAGATTTTGCAGCCATATCTTGACTACTTTGCACTGTACGATCCTTCTGCCTCCCCTAG TCCACGATTTCGATGATAATCGCACCACAGACAATGCCAATATGCATGGTTGATTCCATC TTGATCGTGGAATGGTGTATGAAACGAAGAGGTTTAGACGTTTAGTTGCCCGTTCATGTG TAATGTTGGCTCTCTAAACCCGGAGCCCAGTGCTTGTACTCTTCTGTTTTATTGGCTACT GTAACAGAAAAATATCTTCTGTTTTGTTTACACTGACTAGAACTACTTCACTTCGCAAAA AAAAAAAAAAAAAAAAAAAAAAAAACTCGAGACTAGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10346#0      GCAGCAGGTTTCTCAAAATGACCAAGTATCTGCTGCAGTCATGGATACTGAATCAATACA 60
consensus_10346#1      ------------------------------------------------------------
                                                                                   

consensus_10346#0      CAGGGATCCTGTTGAGAGGCAAGCTGCATCTTCAACTGGCCACATGCCAGCTGCCATCAC 120
consensus_10346#1      ------------------------------------------------------------
                                                                                   

consensus_10346#0      AGACAGTGAACCATCAGAAAATGAGCCTGATGATCTGTATATGCCTTCTCCAGATCAGAG 180
consensus_10346#1      ------------------------------------------------------------
                                                                                   

consensus_10346#0      TTTGTCTAACTCTCCAGATATCGACAGAATCATTAACAGCATATGCCCTAGTTCATCCCC 240
consensus_10346#1      ------------------------------------------------------------
                                                                                   

consensus_10346#0      TAGGCATATGACCCCTGAAAAAGTCTCTAATGAGTTTGACAACGTCCAGTTAACTACACC 300
consensus_10346#1      ------------------------------------------------------------
                                                                                   

consensus_10346#0      ACCACCTTCCGATATCGACATGTCTGATCCTGAGCATTTTGCATGTAACTACGTTCCGCA 360
consensus_10346#1      ------------------------------------------------------------
                                                                                   

consensus_10346#0      GGAAGTTAGAAAGGCCCTTGCGAAGCTAAGATCTAGTAATTCATCATTTGAGCGTGCGAT 420
consensus_10346#1      ------------------------------------------------------------
                                                                                   

consensus_10346#0      GTCACAGGCAAGTTCTGGTGATGTGCATGCATTAAGTGATTCTGAAGATTGCGACGAACG 480
consensus_10346#1      ------------------------------------------------------------
                                                                                   

consensus_10346#0      CTGGAATGTTGGTACCAAGAGGAATCAAGGGTGTGGTCGTGGTCGTGGTCTTACACTCTG 540
consensus_10346#1      ------------------------------------------------------------
                                                                                   

consensus_10346#0      TCTCAAGGTGTGGAATTTGGCTAAGGGTGTCCGCATTCCAGTGCTATTGAACGCTTCGGG 600
consensus_10346#1      ------------------------------------------------------------
                                                                                   

consensus_10346#0      GGAGCCTGTTGGGAAAGAGGCAGGCACCTTATCTACCTTTCTGGGTGCATTAGCACGTGA 660
consensus_10346#1      ------------------------------------------------------------
                                                                                   

consensus_10346#0      CGGAATATTGGCACCTCTGACACATCAAGATTGGAGACGTGTTCCAGAGAAAAACAAGGA 720
consensus_10346#1      ------------------------------------------------------------
                                                                                   

consensus_10346#0      TGTGATGTATCATATTGTCAAGCTCAAATTTGACATTGCTCCAGCTGCTGAATTCTGGAT 780
consensus_10346#1      ------------------------------------------------------------
                                                                                   

consensus_10346#0      CATGAAGTGTATAGGAAGAAAGTGGAAGAGTTGGAAAGCTCTCTTAAAACAAAAACATTA 840
consensus_10346#1      ------------------------------------------------------------
                                                                                   

consensus_10346#0      TGATACTCATGAAACGGTGGAGGAATGCCTTGCTGATCAAAATCCTCGCGTTCTCAAGGA 900
consensus_10346#1      ------------------------------------------------------------
                                                                                   

consensus_10346#0      ACAGTGGCAATATTTAGTTGCATATTGGGGTACGGAAAAAGCGAAGGCTGTGAGTAGTCG 960
consensus_10346#1      ------------------------------------------------------------
                                                                                   

consensus_10346#0      AAATAAAGCTTGTCGGGCAAATGTAACCGCTACGCATACTGCAGGAACAAAGAGCTTTGC 1020
consensus_10346#1      ------------------------------------------------------------
                                                                                   

consensus_10346#0      ACGGATAATTGAGGAGGAGAAGCAGAAGCGGCCTAACAATGAGGAGCCCACTGCTGCGGA 1080
consensus_10346#1      ------------------------------------------------------------
                                                                                   

consensus_10346#0      TTTGTTCCTATTGACTCATACACACAGAAACGGGAAGCCTATGAAGAAGGAAAAAGCTGA 1140
consensus_10346#1      ------------------------------------------------------------
                                                                                   

consensus_10346#0      TATCATTGCACGAGTCCGTGAACAATCTCATAAGCAAGCCGAATGCTCAGGAAGTGACTC 1200
consensus_10346#1      ------------------------------------------------------------
                                                                                   

consensus_10346#0      TGCAGCACACAAAGTCGGACTTGAATCCTGCTCCATTGGCCTGCGTGGGAAGAGGGGTCA 1260
consensus_10346#1      ------------------------------------------------------------
                                                                                   

consensus_10346#0      TCGTCGGAAGGCAGTCTTGCAGGCATCCTTCAAGGAAGCTGAGGAGGCTAAAAGAAAGGC 1320
consensus_10346#1      ------------------------------------------------------------
                                                                                   

consensus_10346#0      TGAAGACGAGGCAGCGACGCTGAGGAAGAAGATGGTGGCAATGGAAGAAAGTCAGAAGAA 1380
consensus_10346#1      ------------------------------------------------------------
                                                                                   

consensus_10346#0      ACTGCAAGAGGATTTGGCGAATATGAAGAGTACAGTTAGTGCTATGCAGAAGACGACGTC 1440
consensus_10346#1      ------AGAGGATTTGGCGAATATGAAGAGTACAGTTAGTGCTATGCAGAAGACGACGTC 54
                             ******************************************************

consensus_10346#0      AACTGGTGACCTATCGGATGGTCAAACGCAAAACTTTCCACAGGTCCAAAATTCACGAAG 1500
consensus_10346#1      AACTGGTGACCTATCGGAGGGTCAAACGCAAAACTTTCCACAGGTCCAAAATTCACGAAG 114
                       ****************** *****************************************

consensus_10346#0      CGCTCATGAGATTTTGCAGCCATATCTTGACTACTCTGCACTGTACGATCCTTCTGCCTC 1560
consensus_10346#1      CGCTCATGAGATTTTGCAGCCATATCTTGACTACTTTGCACTGTACGATCCTTCTGCCTC 174
                       *********************************** ************************

consensus_10346#0      CCCTAGTCCACGATTTCGATGATAATCGCACCACAGACAATGCCAATATGCATGGTTGAT 1620
consensus_10346#1      CCCTAGTCCACGATTTCGATGATAATCGCACCACAGACAATGCCAATATGCATGGTTGAT 234
                       ************************************************************

consensus_10346#0      TCCATCTTGATCGTGGAATGGTGTATGAAACGAAGAGGTTTAGACGTTTAGTTGGCCGTT 1680
consensus_10346#1      TCCATCTTGATCGTGGAATGGTGTATGAAACGAAGAGGTTTAGACGTTTAGTTGCCCGTT 294
                       ****************************************************** *****

consensus_10346#0      CATGTGTAATGTTGGCTCTCTAAACCCGGAGCCCAGTGCTTGTACTCTTCTGTTTTATTG 1740
consensus_10346#1      CATGTGTAATGTTGGCTCTCTAAACCCGGAGCCCAGTGCTTGTACTCTTCTGTTTTATTG 354
                       ************************************************************

consensus_10346#0      GCTACTGTAACAGGATACTCTCTTCTGTTTTGTTTACACTGACTAGAACTACTTCACTTC 1800
consensus_10346#1      GCTACTGTAACAGAAAAATATCTTCTGTTTTGTTTACACTGACTAGAACTACTTCACTTC 414
                       ************* * * * ****************************************

consensus_10346#0      GCATTTCCCTTCCTGTGAAATGATTTTGGGCGTGTTTAGTGAAGCTTGAGATTCTGAGAA 1860
consensus_10346#1      GCA-------------AAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGACTAGT---- 457
                       ***              ***  *              *   ** ** **** *       

consensus_10346#0      GCAGTTAATTGGTAGCCAGTTTCTGAGAATATAGAAAAGTTGGGTTTCTCAGCTTCTGCC 1920
consensus_10346#1      ------------------------------------------------------------
                                                                                   

consensus_10346#0      TTCGAGCTTATAGTTCATTTTCTGGATTCTATATCTACAACTTCTCAGAATCTGTACCAA 1980
consensus_10346#1      ------------------------------------------------------------
                                                                                   

consensus_10346#0      AACATAGACTATTTAAGGGAGCTTTTGGTTATGGGAGAAGTTGCAGCAGCTAGAAACTCC 2040
consensus_10346#1      ------------------------------------------------------------
                                                                                   

consensus_10346#0      CCCAAACATACTCTCTATAGGGTTATACCT 2070
consensus_10346#1      ------------------------------
                                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)