These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10351#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2267 fasta sequence [AATTTACTTGACAAAAAGAAAAAAAATTCTCCCCTTCCCCCCTTTGCTGCGATGATGCTCGCCGGCTATGGCATCCTCGCCGTTGTCCTCGTCCTCCTGCCGCCGTCGGCCACGCCGGCTGGGATCGCTGACTGCGACCTCGGCGTCGGCAACACGTACGTGGGCAACAGCACGTTCGAGGCGAACCTGAACCACCTCGCCGCGGAGCTCCCCGGCAACGTCTCCACGGCGCATACCGGCGGCTTCGCGGTCGCCACCGTCGGCGCGGATCCCGACCAGGTGTTCGCGCTGGCGCTCTGCCGCGGCGACGTGAACGCCACAGCCTGCCGCGCGTGCGTCGCGGCGGCGTTCGTCGACGGGAAGAATGCTTGCCCCGGCATCAATGGCGTCACCGTGTACGAGGACGCCTGCGTAGTTCGCTTCTCCGGCCAGAGGTTCATGGATTTCCTCAGTCCGGATCAGTGGCAGGTCACCGAGATGATTTGGGTTCCCGAGCAAGCCTCGGAGAGCGTCAATGCGCCGGCGGTTGGCTGGTTCAACGCCGCCATCGCGAAGATCCTCGCCGCCCTGGTCGACCACGCCGTGGCCACGGCGACGGGCAACAACTCGACCACCAAGAAGTATTTCGCCACGGGTGAGGAGGACTTCGACCCCAACATCTACGGGTTCGCGCAGTGCGTGCCGGACCTGACGCAGGAGCAGTGCAAGGAATGCCTCAACACCTTCCTTTTTCAAGCAAAACAAGTGTACTTTGGCAAGAGCCTTAGCTGGGTTGGTATGAATTCGGTGTGGTGCAGACTGATGTATAGTGTGCGGCCGTTCTACGGAGGCCGGGCGATGCTGCAGCTGTCGGCGCCACCACCACCAGCAGCCGAGGCTCCGGTTCTATCTCTAGAGCCTGGAGCAGGGAAGAAAAAGAGTGCAGCTGGAATCGCTGCCGTCGTCGCTTCTTCAGTTGTGGTATTGTTGATCCTTTCATTTTTTGCAGTTGTTCTCTTCAGGAGAAGGTCCAAGGTTACTGAGACTGACCACCAGTTGAGGAAGATAACAAGAGCACAATGCTTGATTTTTGACCTGCCAGCTCTGCAAGAGGCAACGGATAACTTCTCGGACAATAATAAGCTCGGAGAAGGTGGTTATGGTATTGTATACAAGGGAGTACTCTCAGATGGACAAGAAGTAGCAGTGAAGAAACTTTTGGGAACAAGTGAGCATGGATTGGATCAGCTACAAAATGAGGTGTTGTTATTGGCAGAGCTTCAACACAAGAACCTTGTTAAGCTACAAGGGTTTTGCTTGCATCAGGGGGAAACACTGCTTGTTTATGAATACGTCAAGAACGGGAGCCTGGATAACTTTCTATTCGATACCAGTAGGGGAAACACACCAAACTGGGAGCAACTGTACAACATCATTTTTGGAATTGCCAAGGGAATATTGTATCTTCACGAGGACTCAAGCTTGAGGATCATTCACCGAGACCTGAAATCAAACAACATCCTACTTGGGGAGGACATGGAACCAAAAATTGCAGATTTTGGATTGGCAAGGCTACTAGAAGAAGGTCATACTAATACTCGGACAACTAGAATTGTTGGAACATTCGGTTATATGGCACCTGAGTACGCAATACACGGAAATGTGTCAACCAAGATCGATGTTTTAAGTTTTGGTGTGTTGGTCCTTGAAATTGTAACAGGGAGAAGGAACCTCAATTCTGACGATCATGATCGCGGGAATCTCCTTAGTGATGTCTGGAATTGCTGGACAAAAGGGACGGTTACACAACTAATTGACCAATCACTTGAAGAGCAATTCCGAAGACAAGCACTGCGATGCATTCATATCGGGCTGCTGTGTGTCCAGTCAGATCCTGATGACAGGCCTCACATGTCATCTGTCATTTTCATGTTGAGTAGGGAAAACATGAATCTTCAGCCACCGGCACAACCTGCATTCTTCTTTGATGGAGACTCAAACTCATGTTCTCAACCCTTTGAGCAACCCGTGTATAATCGGCCTAATGCAATCTATGAAGAGGATATCTCCGTGAATAGGATGACAGTTACTGACATATACCCCAGATAACCCTTCCCCCTCCCCATTCCTAATCCCCCCTTTCCCAGTGGCGCAATTGTCACCATTGTTTGTCAACTTCATTGAACCATCTGCGTATGGTTTGATCTGCACCTTAGAAGGCACATTTAAATATTCTAGTTGTTGTCATTACATTATATTCTTATATGGCCAGTTATCTTATGTTCTTT] [+] EMBL AK103108 [AATTTACTTGACAAAAAGAAAAAAAATTCTCCCCTTCCCCCCTTTGCTGCGATGATGCTCGCCGGCTATGGCATCCTCGCCGTTGTCCTCGTCCTCCTGCCGCCGTCGGCCACGCCGGCTGGGATCGCTGACTGCGACCTCGGCGTCGGCAACACGTACGTGGGCAACAGCACGTTCGAGGCGAACCTGAACCACCTCGCCGCGGAGCTCCCCGGCAACGTCTCCACGGCGCATACCGGCGGCTTCGCGGTCGCCACCGTCGGCGCGGATCCCGACCAGGTGTTCGCGCTGGCGCTCTGCCGCGGCGACGTGAACGCCACAGCCTGCCGCGCGTGCGTCGCGGCGGCGTTCGTCGACGGGAAGAATGCTTGCCCCGGCATCAATGGCGTCACCGTGTACGAGGACGCCTGCGTAGTTCGCTTCTCCGGCCAGAGGTTCATGGATTTCCTCAGTCCGGATCAGTGGCAGGTCACCGAGATGATTTGGGTTCCCGAGCAAGCCTCGGAGAGCGTCAATGCGCCGGCGGTTGGCTGGTTCAACGCCGCCATCGCGAAGATCCTCGCCGCCCTGGTCGACCACGCCGTGGCCACGGCGACGGGCAACAACTCGACCACCAAGAAGTATTTCGCCACGGGTGAGGAGGACTTCGACCCCAACATCTACGGGTTCGCGCAGTGCGTGCCGGACCTGACGCAGGAGCAGTGCAAGGAATGCCTCAACACCTTCCTTTTTCAAGCAAAACAAGTGTACTTTGGCAAGAGCCTTAGCTGGGTTGGTATGAATTCGGTGTGGTGCAGACTGATGTATAGTGTGCGGCCGTTCTACGGAGGCCGGGCGATGCTGCAGCTGTCGGCGCCACCACCACCAGCAGCCGAGGCTCCGGTTCTATCTCTAGAGCCTGGAGCAGGGAAGAAAAAGAGTGCAGCTGGAATCGCTGCCGTCGTCGCTTCTTCAGTTGTGGTATTGTTGATCCTTTCATTTTTTGCAGTTGTTCTCTTCAGGAGAAGGTCCAAGGTTACTGAGACTGACCACCAGTTGAGGAAGATAACAAGAGCACAATGCTTGATTTTTGACCTGCCAGCTCTGCAAGAGGCAACGGATAACTTCTCGGACAATAATAAGCTCGGAGAAGGTGGTTATGGTATTGTATACAAGGGAGTACTCTCAGATGGACAAGAAGTAGCAGTGAAGAAACTTTTGGGAACAAGTGAGCATGGATTGGATCAGCTACAAAATGAGGTGTTGTTATTGGCAGAGCTTCAACACAAGAACCTTGTTAAGCTACAAGGGTTTTGCTTGCATCAGGGGGAAACACTGCTTGTTTATGAATACGTCAAGAACGGGAGCCTGGATAACTTTCTATTCGATACCAGTAGGGGAAACACACCAAACTGGGAGCAACTGTACAACATCATTTTTGGAATTGCCAAGGGAATATTGTATCTTCACGAGGACTCAAGCTTGAGGATCATTCACCGAGACCTGAAATCAAACAACATCCTACTTGGGGAGGACATGGAACCAAAAATTGCAGATTTTGGATTGGCAAGGCTACTAGAAGAAGGTCATACTAATACTCGGACAACTAGAATTGTTGGAACATTCGGTTATATGGCACCTGAGTACGCAATACACGGAAATGTGTCAACCAAGATCGATGTTTTAAGTTTTGGTGTGTTGGTCCTTGAAATTGTAACAGGGAGAAGGAACCTCAATTCTGACGATCATGATCGCGGGAATCTCCTTAGTGATGTCTGGAATTGCTGGACAAAAGGGACGGTTACACAACTAATTGACCAATCACTTGAAGAGCAATTCCGAAGACAAGCACTGCGATGCATTCATATCGGGCTGCTGTGTGTCCAGTCAGATCCTGATGACAGGCCTCACATGTCATCTGTCATTTTCATGTTGAGTAGGGAAAACATGAATCTTCAGCCACCGGCACAACCTGCATTCTTCTTTGATGGAGACTCAAACTCATGTTCTCAACCCTTTGAGCAACCCGTGTATAATCGGCCTAATGCAATCTATGAAGAGGATATCTCCGTGAATAGGATGACAGTTACTGACATATACCCCAGATAACCCTTCCCCCTCCCCATTCCTAATCCCCCCTTTCCCAGTGGCGCAATTGTCACCATTGTTTGTCAACTTCATTGAACCATCTGCGTATGGTTTGATCTGCACCTTAGAAGGCACATTTAAATATTCTAGTTGTTGTCATTACATTATATTCTTATATGGCCAGTTATCTTATGTTCTTT] consensusID : consensus_10351#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1663 fasta sequence [AAAAAAAATTCTCCCCTTCCCCCCTTTGCTGCGATGATGCTCGCCGGCTATGGCATCCTCGCCGTTGTCCTCGTCCTCCTGCCGCCGTCGGCCACGCCGGCTGGGATCGCTGACTGCGACCTCGGCGTCGGCAACACGTACGTGGGCAACAGCACGTTCGAGGCGAACCTGAACCACCTCGCCGCGGAGCTCCCCGGCAACGTCTCCACGGCGCATACCGGCGGCTTCGCGGTCGCCACCGTCGGCGCGGATCCCGACCAGGTGTTCGCGCTGGCGCTCTGCCGCGGCGACGTGAACGCCACAGCCTGCCGCGCGTGCGTCGCGGCGGCGTTCGTCGACGGGAAGAATGCTTGCCCCGGCATCAATGGCGTCACCGTGTACGAGGACGCCTGCGTAGTTCGCTTCTCCGGCCAGAGGTTCATGGATTTCCTCAGTCCGGATCAGTGGCAGGTCACCGAGATGATTTGGGTTCCCGAGCAAGCCTCGGAGAGCGTCAATGCGCCGGCGGTTGGCTGGTTCAACGCCGCCATCGCGAAGATCCTCGCCGCCCTGGTCGACCACGCCGTGGCCACGGCGACGGGCAACAACTCGACCACCAAGAAGTATTTCGCCACGGGTGAGGAGGACGTCGACCCCAACATCTACGGGTTCGCGCAGTGCGTGCCGGACCTGACGCAGGAGCAGTGCAAGGAATGCCTCAACACCTTCCTTTTTCAAGCAAAACAAGTGTACTTTGGCAAGAGCCTTA-GCTGGGTTGGTATGAATTCGGTGTGGTGCAGACTGATGTATAGTGTGCGGCCGTTCTACGGAGGCCGGGCGATGCTGCAGCTGTCGGCGCCACCACCACCAGCAGCCGAGGCTCCGGTTCTATCTCTAGAGCCTGGAGCAGGGAAGAAAAAGAGTGCAGCTGGAATCGCTGCCGTCGTCGCTTCTTCAGTTGTGGTATTGTTGATCCTTTCATTTTTTGCAGTTGTTCTCTTCAGGAGAAGGTCCAAGGTTACTGAGACTGACCACCAGTTGAGGAAGATAACAAGAGCACAATGCTTGATTTTTGACCTGCCAGCTCTGCAAGAGGCAACGGATAACTTCTCGGACAATAATAAGCTCGGAGAAGGTGGTTATGGTATTGTATACAAGGGAGTACTCTCAGATGGACAAGAAGTAGCAGTGAAGAAACTTTTGGGAACAAGTGAGCATGGATTGGATCAGCTACAAAATGAGGTGTTGTTATTGGCAGAGCTTCAACACAAGAACCTTGTTAAGCTACAAGGGTTTTGCTTGCATCAGGGGGAAACACTGCTTGTTTATGAATACGTCAAGAACGGGAGCCTGGATAACTTTCTATTCGATACCAGTAGGGGAAACACACCAAACTGGGAGCAACTGTACAACATCATTTTTGGAATTGCCAAGGGAATATTGTATCTTCACGAGGACTCAAGCTTGA-GGATCATTCACCGAGACCTGAAATCAAACAACATCCTACTTGGGGAGGACATGGAACCAAAAATTGCAGATTTTGGATTGGCAAGGCTACTAGAAGAAGGCCATACTAATACTCGGACAACTAGAATTGTTGGAACATTGTAAGCTCATGTGCATAATAAAACCTTCACTCATAGAGATATTGAATGTGCAAGCCTAATGCTTATCCTCTGCAGCG] [+] EMBL AK106627 [AAAAAAAATTCTCCCCTTCCCCCCTTTGCTGCGATGATGCTCGCCGGCTATGGCATCCTCGCCGTTGTCCTCGTCCTCCTGCCGCCGTCGGCCACGCCGGCTGGGATCGCTGACTGCGACCTCGGCGTCGGCAACACGTACGTGGGCAACAGCACGTTCGAGGCGAACCTGAACCACCTCGCCGCGGAGCTCCCCGGCAACGTCTCCACGGCGCATACCGGCGGCTTCGCGGTCGCCACCGTCGGCGCGGATCCCGACCAGGTGTTCGCGCTGGCGCTCTGCCGCGGCGACGTGAACGCCACAGCCTGCCGCGCGTGCGTCGCGGCGGCGTTCGTCGACGGGAAGAATGCTTGCCCCGGCATCAATGGCGTCACCGTGTACGAGGACGCCTGCGTAGTTCGCTTCTCCGGCCAGAGGTTCATGGATTTCCTCAGTCCGGATCAGTGGCAGGTCACCGAGATGATTTGGGTTCCCGAGCAAGCCTCGGAGAGCGTCAATGCGCCGGCGGTTGGCTGGTTCAACGCCGCCATCGCGAAGATCCTCGCCGCCCTGGTCGACCACGCCGTGGCCACGGCGACGGGCAACAACTCGACCACCAAGAAGTATTTCGCCACGGGTGAGGAGGACGTCGACCCCAACATCTACGGGTTCGCGCAGTGCGTGCCGGACCTGACGCAGGAGCAGTGCAAGGAATGCCTCAACACCTTCCTTTTTCAAGCAAAACAAGTGTACTTTGGCAAGAGCCTTA GCTGGGTTGGTATGAATTCGGTGTGGTGCAGACTGATGTATAGTGTGCGGCCGTTCTACGGAGGCCGGGCGATGCTGCAGCTGTCGGCGCCACCACCACCAGCAGCCGAGGCTCCGGTTCTATCTCTAGAGCCTGGAGCAGGGAAGAAAAAGAGTGCAGCTGGAATCGCTGCCGTCGTCGCTTCTTCAGTTGTGGTATTGTTGATCCTTTCATTTTTTGCAGTTGTTCTCTTCAGGAGAAGGTCCAAGGTTACTGAGACTGACCACCAGTTGAGGAAGATAACAAGAGCACAATGCTTGATTTTTGACCTGCCAGCTCTGCAAGAGGCAACGGATAACTTCTCGGACAATAATAAGCTCGGAGAAGGTGGTTATGGTATTGTATACAAGGGAGTACTCTCAGATGGACAAGAAGTAGCAGTGAAGAAACTTTTGGGAACAAGTGAGCATGGATTGGATCAGCTACAAAATGAGGTGTTGTTATTGGCAGAGCTTCAACACAAGAACCTTGTTAAGCTACAAGGGTTTTGCTTGCATCAGGGGGAAACACTGCTTGTTTATGAATACGTCAAGAACGGGAGCCTGGATAACTTTCTATTCGATACCAGTAGGGGAAACACACCAAACTGGGAGCAACTGTACAACATCATTTTTGGAATTGCCAAGGGAATATTGTATCTTCACGAGGACTCAAGCTTGA GGATCATTCACCGAGACCTGAAATCAAACAACATCCTACTTGGGGAGGACATGGAACCAAAAATTGCAGATTTTGGATTGGCAAGGCTACTAGAAGAAGGCCATACTAATACTCGGACAACTAGAATTGTTGGAACATTGTAAGCTCATGTGCATAATAAAACCTTCACTCATAGAGATATTGAATGTGCAAGCCTAATGCTTATCCTCTGCAGCG] [+] EMBL CF323061 [ CCGGACCTGACGCAGGAGCAGTGCAAGGAATGCCTCAACACCTTCCTTTTTCAAGCAAAACAAGTGTACTTTGGCAAGAGCCTTATTTTGGGTTGGTATGAATTCGGTGTGGTGCAGACTGATGTATAGTGTGCGGCCGTTCTACGGAGGCCGGGCGATGCTGCAGCTGTCGGCGCCACCACCACCAGCAGCCGAGGCTCCGGTTCTATCTCTAGAGCCTGGAGCAGGGAAGAAAAAGAGTGCAGCTGGAATCGCTGCCGTCGTCGCTTCTTCAGTTGTGGTATTGTTGATCCTTTCATTTTTTGCAGTTGTTCTCTTCAGGAGAAGGTCCAAGGTTACTGAGACTGACCACCAGTTGAGGAAGATAACAAGAGCACAATGCTTGATTTTTGACCTGCCAGCTCTGCAAGAGGCAACGGATAACTTCTCGGACAATAATAAGCTCGGAGAAGGTGGTTATGGTATTGTATAC AGGGAGTACTCTCAGATGGACAAGAAGTAGCAGTGAAGAAACTTTTGGGAACAAGTGAGCAT ] [+] EMBL OSC104151 [ gaaatgnGTGGTTATGGTATTGTATACAAGGGAGTACTCTCAGATGGACAAGAAGTAGCAGTGAAGAAACTTTTGGGAACAAGTGAGCATGGATTGGNTCAGCTACAAAATGAGGTGTTGTTATTGGCAGAGCTTCAACACAAGANCCTTGTTAAGCTACAAGGGTTTTNCTTGCATCAGGGGGAAACACTGCTTGTTTATGAATACGTCAAGAACGGGAGCCTGGATAACTTTCTATTCGATACCAGTAGGGGAAACACACCAAACTGGGAGCAACTGTACAACATCATTTTTGGAATTGCCAAGGGAATATTGTATCTTCACGAGGACTCAAGCTTGAGGGATCATTCA ] consensusID : consensus_10351#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 795 fasta sequence [ACTCAATTGGGAGCAACAGTACAACATCATTCTTGGAATTGCTAAGGGTATACTGTATCTTCACGAGGATTCAAGCTTGAGGATCATTCACCGTGATCTGAAATCAAATAACATTCTACTTGGTGAGGACATGGAACCAAAAATTGCAGATTTTGGATTGGCAAGGCTGCTAGGAGAAGGTCATACTCATTCTAGGACAACCAGAGTTGTTGGAACATTCGGTTATATGGCACCCGAGTACGTAGCAGACGGAAATGTGTCAACCAAGATAGACATTTTTAGCTTTGGTGTGTTGGTCCTTGAAATTGTGATGAGGAGAAGGAACTCCGATTCTGGTGATCATGATAATGTGAATCTCCTGACTGATGTCTGGAATAGCTGGACAAAAGGGACAATTTCACAATTCATTGACCAATCGCTTGATGGGTACTCTCGAAGCCAAGCCATGCGATGCATCCACATTGGGCTATTGTGTGTCCAGCCGGACCCTGGTGAGAGGCCTCATATATCATCTGTCATTTTCATGTTAACCAGGGAAAACATGGAGCTTCAGCCACCAGCACAACCTGCATTCTTCTTTGGGACAGAATCGGCTTCCTCTTCTACATCATGTGGGCAACGCAGCTATGTGTATGACCGCTATGGTTTTGCTAGCGTTTCTGTAAATGATGTTACACTCACCGAGCCATATCCTAGATGACTGGTCTTACTAGGAGGTCACAATGCGAATGGGTAAAAGTCAGAGTACCGTACTGTGTCCATACACACGTCTTAACTTTGTCCAAGGAATCTAAT] [-] EMBL CB633388 [ACTCAATTGGGAGCAACAGTACAACATCATTCTTGGAATTGCTAAGGGTATACTGTATCTTCACGAGGATTCAAGCTTGAGGATCATTCACCGTGATCTGAAATCAAATAACATTCTACTTGGTGAGGACATGGAACCAAAAATTGCAGATTTTGGATTGGCAAGGCTGCTAGGAGAAGGTCATACTCATTCTAGGACAACCAGAGTTGTTGGAACATTCGGTTATATGGCACCCGAGTACGTAGCAGACGGAAATGTGTCAACCAAGATAGACATTTTTAGCTTTGGTGTGTTGGTCCTTGAAATTGTGATGAGGAGAAGGAACTCCGATTCTGGTGATCATGATAATGTGAATCTCCTGACTGATGTCTGGAATAGCTGGACAAAAGGGACAATTTCACAATTCATTGACCAATCGCTTGATGGGTACTCTCGAAGCCAAGCCATGCGATGCATCCACATTGGGCTATTGTGTGTCCAGCCGGACCCTGGTGAGAGGCCTCATATATCATCTGTCATTTTCATGTTAACCAGGGAAAACATGGAGCTTCAGCCACCAGCACAACCTGCATTCTTCTTTGGGACAGAATCGGCTTCCTCTTCTACATCATGTGGGCAACGCAGCTATGTGTATGACCGCTATGGTTTTGCTAGCGTTTCTGTAAATGATGTTACACTCACCGAGCCATATCCTAGATGACTGGTCTTACTAGGAGGTCACAATGCGAATGGGTAAAAGTCAGAGTACCGTACTGTGTCCATACACACGTCTTAACTTTGTCCAAGGAATCTAAT] [-] EMBL CB618869 [ TGAGGATCATTCACCGTGATCTGAAATCAAATAACATTCTACTTGGTGAGGACATGGAACCAAAAATTGCAGATTTTGGATTGGCAAGGCTGCTAGGAGAAGGTCATACTCATTCTAGGACAACCAGAGTTGTTGGAACATTCGGTTATATGGCACCCGAGTACGTAGCAGACGGAAATGTGTCAACCAAGATAGACATTTTTAGCTTTGGTGTGTTGGTCCTTGAAATTGTGATGAGGAGAAGGAACTCCGATTCTGGTGATCATGATAATGTGAATCTCCTGACTGATGTCTGGAATAGCTGGACAAAAGGGACAATTTCACAATTCATTGACCAATCGCTTGATGGGTACTCTCGAAGCCAAGCCCTGCGATGCATCCACATTGGGCTATTGTGTGTCCAGCCGGACCCTGATGAGAGGCCTCATATATCATCTGTCATTTTCATGTTAACCAGGGAAAACATGGAGCTTCAGCCACCAGCACAACCTGCATTCTTCTTTGGGACAGAATCGGCTTCCTCTTCTACATCATGTGGGCAACGCAGCTATGTGTATGACCGCTATGGTTTTGCTAGCGTTTCTGTAAATGATGTTACACTCACCGAGCCATATCCTAGATGACTGGTCTTACTAGGAGGTCACAATGCGAATGGGTAAAAGTCAGAGTAC ] consensusID : consensus_10351#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 794 fasta sequence [AGTTCGACCCCAACATCTACGGGTTCGCGCAGTGCGTGCCGGACCTGACGCCCACGCAGTGCAACGATTGCCTTAAGGACCTCCTCTTCTATGCAAAACAAGCGTACCTCGGCAAAAGCCTTAGCTGGGTTCGTGTCAATTCGGTGTGGTGCAGACTGATGTATAGTGTGCAGCCATTCTACCGAGGCCGGGCGATGCTGCAGGTCTCGGCGCCACCACCAACAGCCGAAGCTCCTGTTCTTTCTCCAGAGCCTGGGTCAGGGAAGAAAATTAGTACAGCAGGAATCGCTGCTGGCGTCGCTTCGTCGGTTGTGGTATTGTTGATACTTTCAGTTTTCGCATTTGTTCGCTTCAGGAGAAGGACCAAGGTTACAGACGCTGTCCACCCATTGAAGAAAATAACGAGAGCACAATGCATGATTTTTGATCTTTCTGCACTGCAAGAGGCAACCGAGAATTTCTCGCCGAATAATAAGCTTGGCGAGGGTGGTTTTGGTGCTGTATACAAGGGAGTGCTCTCAGATGGACAAGAAGTAGCAGTGAAGAAACTTTTAGGAACTGGTCATGGATTGGACCAGCTATACAATGAGATCAAGTTGTTGGCTGAGCTTCAGCACAAGAACCTTGNTAGGCTACAGGGATTTTGCTTGCATCAGGAGCAGACTCTGCTTGNTTACGAATACCTCAAGAACAGGAGCCTGGACAACTTTTCTATTTGATCCCAGTAGAGGGAATGGCCCTAAACTGGGATTAACAGTACAACATCATTTTGGGAANTGGCAAAGGAATATTGG] [+] EMBL CA766096 [AGTTCGACCCCAACATCTACGGGTTCGCGCAGTGCGTGCCGGACCTGACGCCCACGCAGTGCAACGATTGCCTTAAGGACCTCCTCTTCTATGCAAAACAAGCGTACCTCGGCAAAAGCCTTAGCTGGGTTCGTGTCAATTCGGTGTGGTGCAGACTGATGTATAGTGTGCAGCCATTCTACCGAGGCCGGGCGATGCTGCAGGTCTCGGCGCCACCACCAACAGCCGAAGCTCCTGTTCTTTCTCCAGAGCCTGGGTCAGGGAAGAAAATTAGTACAGCAGGAATCGCTGCTGGCGTCGCTTCGTCGGTTGTGGTATTGTTGATACTTTCAGTTTTCGCATTTGTTCGCTTCAGGAGAAGGACCAAGGTTACAGACGCTGTCCACCCATTGAAGAAAATAACGAGAGCACAATGCATGATTTTTGATCTTTCTGCACTGCAAGAGGCAACCGAGAATTTCTCGCCGAATAATAAGCTTGGCGAGGGTGGTTTTGGTGCTGTATACAAGGGAGTGCTCTCAGATGGACAAGAAGTAGCAGTGAAGAAACTTTTAGGAACTGGTCATGGATTGGACCAGCTATACAATGAGATCAAGTTGTTGGCTGAGCTTCAGCACAAGAACCTTGNTAGGCTACAGGGATTTTGCTTGCATCAGGAGCAGACTCTGCTTGNTTACGAATACCTCAAGAACAGGAGCCTGGACAACTTTTCTATTTGATCCCAGTAGAGGGAATGGCCCTAAACTGGGATTAACAGTACAACATCATTTTGGGAANTGGCAAAGGAATATTGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10351#1 ------------------AAAAAAAATTCTCCCCTTCCCCCCTTTGCTGCGATGATGCTC 42 consensus_10351#3 ------------------------------------------------------------ consensus_10351#0 AATTTACTTGACAAAAAGAAAAAAAATTCTCCCCTTCCCCCCTTTGCTGCGATGATGCTC 60 consensus_10351#2 ------------------------------------------------------------ consensus_10351#1 GCCGGCTATGGCATCCTCGCCGTTGTCCTCGTCCTCCTGCCGCCGTCGGCCACGCCGGCT 102 consensus_10351#3 ------------------------------------------------------------ consensus_10351#0 GCCGGCTATGGCATCCTCGCCGTTGTCCTCGTCCTCCTGCCGCCGTCGGCCACGCCGGCT 120 consensus_10351#2 ------------------------------------------------------------ consensus_10351#1 GGGATCGCTGACTGCGACCTCGGCGTCGGCAACACGTACGTGGGCAACAGCACGTTCGAG 162 consensus_10351#3 ------------------------------------------------------------ consensus_10351#0 GGGATCGCTGACTGCGACCTCGGCGTCGGCAACACGTACGTGGGCAACAGCACGTTCGAG 180 consensus_10351#2 ------------------------------------------------------------ consensus_10351#1 GCGAACCTGAACCACCTCGCCGCGGAGCTCCCCGGCAACGTCTCCACGGCGCATACCGGC 222 consensus_10351#3 ------------------------------------------------------------ consensus_10351#0 GCGAACCTGAACCACCTCGCCGCGGAGCTCCCCGGCAACGTCTCCACGGCGCATACCGGC 240 consensus_10351#2 ------------------------------------------------------------ consensus_10351#1 GGCTTCGCGGTCGCCACCGTCGGCGCGGATCCCGACCAGGTGTTCGCGCTGGCGCTCTGC 282 consensus_10351#3 ------------------------------------------------------------ consensus_10351#0 GGCTTCGCGGTCGCCACCGTCGGCGCGGATCCCGACCAGGTGTTCGCGCTGGCGCTCTGC 300 consensus_10351#2 ------------------------------------------------------------ consensus_10351#1 CGCGGCGACGTGAACGCCACAGCCTGCCGCGCGTGCGTCGCGGCGGCGTTCGTCGACGGG 342 consensus_10351#3 ------------------------------------------------------------ consensus_10351#0 CGCGGCGACGTGAACGCCACAGCCTGCCGCGCGTGCGTCGCGGCGGCGTTCGTCGACGGG 360 consensus_10351#2 ------------------------------------------------------------ consensus_10351#1 AAGAATGCTTGCCCCGGCATCAATGGCGTCACCGTGTACGAGGACGCCTGCGTAGTTCGC 402 consensus_10351#3 ------------------------------------------------------------ consensus_10351#0 AAGAATGCTTGCCCCGGCATCAATGGCGTCACCGTGTACGAGGACGCCTGCGTAGTTCGC 420 consensus_10351#2 ------------------------------------------------------------ consensus_10351#1 TTCTCCGGCCAGAGGTTCATGGATTTCCTCAGTCCGGATCAGTGGCAGGTCACCGAGATG 462 consensus_10351#3 ------------------------------------------------------------ consensus_10351#0 TTCTCCGGCCAGAGGTTCATGGATTTCCTCAGTCCGGATCAGTGGCAGGTCACCGAGATG 480 consensus_10351#2 ------------------------------------------------------------ consensus_10351#1 ATTTGGGTTCCCGAGCAAGCCTCGGAGAGCGTCAATGCGCCGGCGGTTGGCTGGTTCAAC 522 consensus_10351#3 ------------------------------------------------------------ consensus_10351#0 ATTTGGGTTCCCGAGCAAGCCTCGGAGAGCGTCAATGCGCCGGCGGTTGGCTGGTTCAAC 540 consensus_10351#2 ------------------------------------------------------------ consensus_10351#1 GCCGCCATCGCGAAGATCCTCGCCGCCCTGGTCGACCACGCCGTGGCCACGGCGACGGGC 582 consensus_10351#3 ------------------------------------------------------------ consensus_10351#0 GCCGCCATCGCGAAGATCCTCGCCGCCCTGGTCGACCACGCCGTGGCCACGGCGACGGGC 600 consensus_10351#2 ------------------------------------------------------------ consensus_10351#1 AACAACTCGACCACCAAGAAGTATTTCGCCACGGGTGAGGAGGACGTCGACCCCAACATC 642 consensus_10351#3 -------------------------------------------AGTTCGACCCCAACATC 17 consensus_10351#0 AACAACTCGACCACCAAGAAGTATTTCGCCACGGGTGAGGAGGACTTCGACCCCAACATC 660 consensus_10351#2 -----------------------------ACTCAATTGGGAGCAACAGTACAACATCATT 31 * ** ** *** consensus_10351#1 TACGGGTTCGCGCAGTGCGTGCCGGACCTGACGCAGGAGCAGTGCAAGGAATGCCTCAAC 702 consensus_10351#3 TACGGGTTCGCGCAGTGCGTGCCGGACCTGACGCCCACGCAGTGCAACGATTGCCTTAAG 77 consensus_10351#0 TACGGGTTCGCGCAGTGCGTGCCGGACCTGACGCAGGAGCAGTGCAAGGAATGCCTCAAC 720 consensus_10351#2 CTTGGAATTGCTAAGGGTATACTGTATCT---TCACGAGGATTCAAGCTTGAGGATCATT 88 ** * ** ** * * * * * ** * * * * * * * * consensus_10351#1 ACCTTCCTTTTTCAAGCAAAACAAGTGTACTTTGGCAAGAGCCTTAGCTGGGTTGGTATG 762 consensus_10351#3 GACCTCCTCTTCTATGCAAAACAAGCGTACCTCGGCAAAAGCCTTAGCTGGGTTCGTGTC 137 consensus_10351#0 ACCTTCCTTTTTCAAGCAAAACAAGTGTACTTTGGCAAGAGCCTTAGCTGGGTTGGTATG 780 consensus_10351#2 CACCGTGATCTGAAATCAAATAACATTCTACTTGGTGAGGACATGGAACCAAAAATTGCA 148 * * * **** * * ** * * * * consensus_10351#1 AATTCGGTGTGGTGCAGACTGAT--GTATAGTGTGCGGCCGTTCTACGGAGGCCGGGCGA 820 consensus_10351#3 AATTCGGTGTGGTGCAGACTGAT--GTATAGTGTGCAGCCATTCTACCGAGGCCGGGCGA 195 consensus_10351#0 AATTCGGTGTGGTGCAGACTGAT--GTATAGTGTGCGGCCGTTCTACGGAGGCCGGGCGA 838 consensus_10351#2 GATTTTGGATTGGCAAGGCTGCTAGGAGAAGGTCATACTCATTCTAGGACAACCAGA-GT 207 *** * * * ** *** * * ** * ***** ** * * consensus_10351#1 TGCTGCAGCTGTCGGC-----GCCACCACCACCAGCAGCCGAGGCTCCGGT-TCTATCTC 874 consensus_10351#3 TGCTGCAGGTCTCGGC-----GCCACCACCA---ACAGCCGAAGCTCCTGT-TCTTTCTC 246 consensus_10351#0 TGCTGCAGCTGTCGGC-----GCCACCACCACCAGCAGCCGAGGCTCCGGT-TCTATCTC 892 consensus_10351#2 TGTTGGAACATTCGGTTATATGGCACCCGAGTACGTAGCAGACGGAAATGTGTCAACCAA 267 ** ** * **** * **** *** ** * ** ** * consensus_10351#1 TAGAGCCTGGAGCAGGGAAGAAA-AAGAGTGCAGCTGGAATCGCTGCC-GTCGTCGCTTC 932 consensus_10351#3 CAGAGCCTGGGTCAGGGAAGAAA-ATTAGTACAGCAGGAATCGCTGCT-GGCGTCGCTTC 304 consensus_10351#0 TAGAGCCTGGAGCAGGGAAGAAA-AAGAGTGCAGCTGGAATCGCTGCC-GTCGTCGCTTC 950 consensus_10351#2 GATAGACATTTTTAGCTTTGGTGTGTTGGTCC--TTGAAATTGTGATGAGGAGAAGGAAC 325 * ** * ** * ** * * *** * * * * * consensus_10351#1 TTCAGTTGTGGTATTGTTGATCCTTTCATTTTTTGCAGTTGTTCTCTTCAGGAGAAGGTC 992 consensus_10351#3 GTCGGTTGTGGTATTGTTGATACTTTCAGTTTTCGCATTTGTTCGCTTCAGGAGAAGGAC 364 consensus_10351#0 TTCAGTTGTGGTATTGTTGATCCTTTCATTTTTTGCAGTTGTTCTCTTCAGGAGAAGGTC 1010 consensus_10351#2 TCCGATTCTGGTGATCATGATAATGTGAATCTCC-TGACTGATGTCTGGAATAGCTGGAC 384 * ** **** * **** * * * * * ** * ** * ** ** * consensus_10351#1 CAAGGTTACTGAGACTGACCACCAGTTGAGGAAGATAACAAGAGCACAATGCTTGATTTT 1052 consensus_10351#3 CAAGGTTACAGACGCTGTCCACCCATTGAAGAAAATAACGAGAGCACAATGCATGATTTT 424 consensus_10351#0 CAAGGTTACTGAGACTGACCACCAGTTGAGGAAGATAACAAGAGCACAATGCTTGATTTT 1070 consensus_10351#2 AAAAGGGAC--AATTTCACAATTCATTGA--------CCAATCGCTTGATGGGTACTCTC 434 ** * ** * * * * **** * * ** *** * * * consensus_10351#1 TGACCTGCCAGCTCTGCAAGAGGCAACGGATAACTTCTCGGACAATAATAAGCTCGGAGA 1112 consensus_10351#3 TGATCTTTCTGCACTGCAAGAGGCAACCGAGAATTTCTCGCCGAATAATAAGCTTGGCGA 484 consensus_10351#0 TGACCTGCCAGCTCTGCAAGAGGCAACGGATAACTTCTCGGACAATAATAAGCTCGGAGA 1130 consensus_10351#2 GAAGCCA--AGCCATGC--GATGCATCC-ACATTGGGCTATTGTGTGTCCAGCCGGACCC 489 * * ** *** ** *** * * * * *** * consensus_10351#1 AGGTGGTTATGGTATTGTATACAAGGGAGTACTCTCAGATGGACAAGAAGTAGCAGTGAA 1172 consensus_10351#3 GGGTGGTTTTGGTGCTGTATACAAGGGAGTGCTCTCAGATGGACAAGAAGTAGCAGTGAA 544 consensus_10351#0 AGGTGGTTATGGTATTGTATACAAGGGAGTACTCTCAGATGGACAAGAAGTAGCAGTGAA 1190 consensus_10351#2 TGGTGA--GAGGCCTCATATATCATCTGTCATTTTCATGTTAACCAGGGAAAACA----T 543 **** ** **** * * *** * ** ** * ** consensus_10351#1 GAAACTTTTGGGAACAAGTGAGCATGGATTGGATCA-GCTACAAAATGAGGTGTTGTTAT 1231 consensus_10351#3 GAAACTTTTAGGAACTGGT---CATGGATTGGACCA-GCTATACAATGAGATCAAGTTGT 600 consensus_10351#0 GAAACTTTTGGGAACAAGTGAGCATGGATTGGATCA-GCTACAAAATGAGGTGTTGTTAT 1249 consensus_10351#2 GGAGCTTCAGCCACCAGCACAACCTGCATTCTTCTTTGGGACAGAATCGGCTTCCTCTTC 603 * * *** * * * ** *** * * * *** * * * consensus_10351#1 TGGCAGAGCTT--CAACACAAGAACCTTGTTAAGCTACAAGGGTTTTGCTTGCAT--CAG 1287 consensus_10351#3 TGGCTGAGCTT--CAGCACAAGAACCTTGNTAGGCTACAGGGATTTTGCTTGCAT--CAG 656 consensus_10351#0 TGGCAGAGCTT--CAACACAAGAACCTTGTTAAGCTACAAGGGTTTTGCTTGCAT--CAG 1305 consensus_10351#2 TACATCATGTGGGCAACGCAGCTATGT-GTATGACCGCTATGGTTTTGCTAGCGTTTCTG 662 * * * ** * ** * * * * * * ******* ** * * * consensus_10351#1 GGGGAAACACTGC--TTGTTTATGAATACGTCAAG-AACGGGAGCCTGGATAACTTT-CT 1343 consensus_10351#3 GAGCAGACTCTGC--TTGNTTACGAATACCTCAAG-AACAGGAGCCTGGACAACTTTTCT 713 consensus_10351#0 GGGGAAACACTGC--TTGTTTATGAATACGTCAAG-AACGGGAGCCTGGATAACTTT-CT 1361 consensus_10351#2 TAAATGATGTTACACTCACCGAGCCATATCCTAGATGACTGGTCTTACTAGGAGGTCACA 722 * * * * * *** * ** ** * * * * consensus_10351#1 ATTCGATACCAGTAGGGGAAACA-CACCAAACTGGGAGCAACTGTACAACATCATTTTTG 1402 consensus_10351#3 ATTTGATCCCAGTAGAGGGAATGGCCCTAAACTGGGATTAACAGTACAACATCATTTTGG 773 consensus_10351#0 ATTCGATACCAGTAGGGGAAACA-CACCAAACTGGGAGCAACTGTACAACATCATTTTTG 1420 consensus_10351#2 ATGCGA-ATGGGTAAAAGTCAGAGTACCGTACTGTGTCCATACACACGTCTTAACTTT-- 779 ** ** *** * * * **** * * ** * * * *** consensus_10351#1 GAATTGCCAAGGGAATATTGTATCTTCACGAGGACTCAAGCTTGAGGATCATTCACCGAG 1462 consensus_10351#3 GAANTGGCAAAGGAATATTGG--------------------------------------- 794 consensus_10351#0 GAATTGCCAAGGGAATATTGTATCTTCACGAGGACTCAAGCTTGAGGATCATTCACCGAG 1480 consensus_10351#2 -----GTCCAAGGAATCTAAT--------------------------------------- 795 * * * ***** * consensus_10351#1 ACCTGAAATCAAACAACATCCTACTTGGGGAGGACATGGAACCAAAAATTGCAGATTTTG 1522 consensus_10351#3 ------------------------------------------------------------ consensus_10351#0 ACCTGAAATCAAACAACATCCTACTTGGGGAGGACATGGAACCAAAAATTGCAGATTTTG 1540 consensus_10351#2 ------------------------------------------------------------ consensus_10351#1 GATTGGCAAGGCTACTAGAAGAAGGCCATACTAATACTCGGACAACTAGAATTGTTGGAA 1582 consensus_10351#3 ------------------------------------------------------------ consensus_10351#0 GATTGGCAAGGCTACTAGAAGAAGGTCATACTAATACTCGGACAACTAGAATTGTTGGAA 1600 consensus_10351#2 ------------------------------------------------------------ consensus_10351#1 CATTGTAAGCTCATGTGCATAATAAAACCTTCACTCATAGAGATATTGAATGTGCAAGCC 1642 consensus_10351#3 ------------------------------------------------------------ consensus_10351#0 CATTC---GGTTATATGGCACCTGAGTACGCAATACACGGAAATGTGTCAACCAAGATCG 1657 consensus_10351#2 ------------------------------------------------------------ consensus_10351#1 TAATGCTTATCCTCTGCAGCG--------------------------------------- 1663 consensus_10351#3 ------------------------------------------------------------ consensus_10351#0 ATGTTTTAAGTTTTGGTGTGTTGGTCCTTGAAATTGTAACAGGGAGAAGGAACCTCAATT 1717 consensus_10351#2 ------------------------------------------------------------ consensus_10351#1 ------------------------------------------------------------ consensus_10351#3 ------------------------------------------------------------ consensus_10351#0 CTGACGATCATGATCGCGGGAATCTCCTTAGTGATGTCTGGAATTGCTGGACAAAAGGGA 1777 consensus_10351#2 ------------------------------------------------------------ consensus_10351#1 ------------------------------------------------------------ consensus_10351#3 ------------------------------------------------------------ consensus_10351#0 CGGTTACACAACTAATTGACCAATCACTTGAAGAGCAATTCCGAAGACAAGCACTGCGAT 1837 consensus_10351#2 ------------------------------------------------------------ consensus_10351#1 ------------------------------------------------------------ consensus_10351#3 ------------------------------------------------------------ consensus_10351#0 GCATTCATATCGGGCTGCTGTGTGTCCAGTCAGATCCTGATGACAGGCCTCACATGTCAT 1897 consensus_10351#2 ------------------------------------------------------------ consensus_10351#1 ------------------------------------------------------------ consensus_10351#3 ------------------------------------------------------------ consensus_10351#0 CTGTCATTTTCATGTTGAGTAGGGAAAACATGAATCTTCAGCCACCGGCACAACCTGCAT 1957 consensus_10351#2 ------------------------------------------------------------ consensus_10351#1 ------------------------------------------------------------ consensus_10351#3 ------------------------------------------------------------ consensus_10351#0 TCTTCTTTGATGGAGACTCAAACTCATGTTCTCAACCCTTTGAGCAACCCGTGTATAATC 2017 consensus_10351#2 ------------------------------------------------------------ consensus_10351#1 ------------------------------------------------------------ consensus_10351#3 ------------------------------------------------------------ consensus_10351#0 GGCCTAATGCAATCTATGAAGAGGATATCTCCGTGAATAGGATGACAGTTACTGACATAT 2077 consensus_10351#2 ------------------------------------------------------------ consensus_10351#1 ------------------------------------------------------------ consensus_10351#3 ------------------------------------------------------------ consensus_10351#0 ACCCCAGATAACCCTTCCCCCTCCCCATTCCTAATCCCCCCTTTCCCAGTGGCGCAATTG 2137 consensus_10351#2 ------------------------------------------------------------ consensus_10351#1 ------------------------------------------------------------ consensus_10351#3 ------------------------------------------------------------ consensus_10351#0 TCACCATTGTTTGTCAACTTCATTGAACCATCTGCGTATGGTTTGATCTGCACCTTAGAA 2197 consensus_10351#2 ------------------------------------------------------------ consensus_10351#1 ------------------------------------------------------------ consensus_10351#3 ------------------------------------------------------------ consensus_10351#0 GGCACATTTAAATATTCTAGTTGTTGTCATTACATTATATTCTTATATGGCCAGTTATCT 2257 consensus_10351#2 ------------------------------------------------------------ consensus_10351#1 ---------- consensus_10351#3 ---------- consensus_10351#0 TATGTTCTTT 2267 consensus_10351#2 ---------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||