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Oryza sativa
cluster # 10356 cluster # 10356       Sequences # 7       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10356#0 length = 1547 sequences # 4  
consensus_10356#1 length = 435 sequences # 1  
consensus_10356#2 length = 357 sequences # 1  
consensus_10356#3 length = 261 sequences # 1  

consensusID : consensus_10356#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1547
fasta sequence
                              [CCACCCCGCTGAGCCATCATTTCTCTCAAATTTCTCCTCCTCCAATCCAAGGCCCCAAGGAATTGAAGGATGATGCTGCTCGCCAAGGAGTTGGGCCTGTCGCCGCCGGCAGCGGTCACTCCTCGCCGGAGGCCGCCGCCTGCCAGGGTCCCCGCCTCTCCCTCCGGTGGCTCGCCCGTGGCCGTCGGAGACCTCTGGCTCCGGACCAAAGGAGCCGGAGGAGGAGGAGACGGGTTCGGGAGCCACAGCCACGAGAGCGAGATGGATTTGGCCATGCTCGTCACCGACTTCCTTGAGAACGGCGGCACCGGAGGCGCCGATTCCCGCGCCAGCAGCGACTCCGACTCCGCCCTCTCCGACCACCTCGCCGATAACATTTCTATCTACAAGCAAGGCGGCGATGAGAAAGAAAACGAGCTACTCTCCATGGTCCACTCGCTGTTATTCTCGATCCATGAGTCAGACCTTCTGGCTTTCAAAAGAGGTCAATGCAGTGCCAGCTGCATCCGTCATTTACTTGTGAAGCTCTTGAGATATTCGGGATATGATGCAGCTGTTTGCGTATCAAAATGGCAGGGATTCGACAAGATACCTGGAGGTGATCATGAGTATATCGATGTCATCATGAATAGTGATACTGAATATCGTCTGATCATTGATATCGACTTCAGGAGCCACTTTGAAATAGCCAGGGCTGTTGATTCTTATGACAGTCTGCTCAATTCACTTCCGGTGGTCTATGTTGGCACTCTTCCCAGACTGAAACAGTTCTTGCATGTTATGGTAGATGCTGCAAAATGGTCGCTTAAGCAGAACTCTATGCCTCTGCCTCCTTGGAGATCCTTGCCTTATCTCCAAGCAAAATGGCATTCCAAGTATGAGAGGATAGACCTGCACATTGAGCAAGACTTCCGCAGCACAGCTTCAGATCACGCACTATGCATTGGGCACCTCAAAAGGCTGAAATCCTCCCTGCAGTCAGAACTGGATACCGAAAGGTTGCTTATGATGCCAATCAAGACTGATATGAAGCGGAGGGCAAAGTTTGAGAGGCGGCGGCGCCGTTCCTTGCTCAGCTTCTGATTCATATTTGTGCTTCTTGGATACTGAAGTACTGAGAGAAGGAAGAATAGCTTCCCATACTTTTTTTCTGTGATAAAAGGAGTTCTTTTTAACAGTTTTGGACATACAAGGGAAATAGATGACGGGTACTAACAAGGCAGGAGAGTTGAGAGAGTGTGCCAGCTTTTTTTTGAAGGCATATACAAAAACATAAAATTCTTTTTGGATTTCATTTTTGTTCTTCCGGCGATGATGGCTGCTAGTGGTTAATCTGCTGCATACCATGTACAATGATGAGTGTTTACAGCGTTTTTTTCCTCCTTATATTCATTCTTTTATCACATAGATGGACCTTGTGTATTTTGAACACACTTCCTTTTCCCCCTTGTTGTAGAGTGGACATGATACATGCTGTTGGTTCCCTTTGTAATAATAGAATGTTCAAGCTTAGTTACACTCTGTTTTGAAATGATATACTCTAAAAT]

[+] EMBL AK071351             [CCACCCCGCTGAGCCATCATTTCTCTCAAATTTCTCCTCCTCCAATCCAAGGCCCCAAGGAATTGAAGGATGATGCTGCTCGCCAAGGAGTTGGGCCTGTCGCCGCCGGCAGCGGTCACTCCTCACCGGAGGCCGCCGCCTGCCAGGGTCCCCGCCTCTCCCTCCGGTGGCTCGCCCGTGGCCGTCGGAGACCTCTGGCTCCGGACCAAAGGAGCCGGAGGAGGAGGAGACGGGTTCGGGAGCCACAGCCACGAGAGCGAGATGGATTTGGCCATGCTCGTCACCGACTTCCTTGAGAACGGCGGCACCGGAGGCGCCGATTCCCGCGCCAGCAGCGACTCCGACTCCGCCCTCTCCGACCACCTCGCCGATAACATTTCTATCTACAAGCAAGGCGGCGATGAGAAAGAAAACGAGCTACTCTCCATGGTCCACTCGCTGTTATTCTCGATCCATGAGTCAGACCTTCTGGCTTTCAAAAGAGGTCAATGCAGTGCCAGCTGCATCCGTCATTTACTTGTGAAGCTCTTGAGATATTCGGGATATGATGCAGCTGTTTGCGTATCAAAATGGCAGGGATTCGACAAGATACCTGGAGGTGATCATGAGTATATCGATGTCATCATGAATAGTGATACTGAATATCGTCTGATCATTGATATCGACTTCAGGAGCCACTTTGAAATAGCCAGGGCTGTTGATTCTTATGACAGTCTGCTCAATTCACTTCCGGTGGTCTATGTTGGCACTCTTCCCAGACTGAAACAGTTCTTGCATGTTATGGTAGATGCTGCAAAATGGTCGCTTAAGCAGAACTCTATGCCTCTGCCTCCTTGGAGATCCTTGCCTTATCTCCAAGCAAAATGGCATTCCAAGTATGAGAGGATAGACCTGCACATTGAGCAAGACTTCCACAGCACAGCTTCAGATCACGCACTATGCATTGGGCACCTCAAAAGGCTGAAATCCTCCCTGCAGTCAGAACTGGATACCGAAAGGTTGCTTATGATGCCAATCAAGACTGATATGAAGCGGAGGGCAAAGTTTGAGAGGCGGCGGCGCCGTTCCTTGCTCAGCTTCTGATTCATATTTGTGCTTCTTGGATACTGAAGTACTGAGAGAAGGAAGAATAGCTTCCCATAC TTTTTTCTGTGATAAAAGGAGTTCTTTTTAACAGTTTTGGACATACAAGGGAAATAGATGACGGGTACTAACAAGGCAGGAGAGTTGAGAGAGTGTGCCAGCTTTTTTTTGAAGGCATATACAAAAACATAAAATTCTTTTTGGATTTCATTTTTGTTCTTCCGGCGATGATGGCTGCTAGTGGTTAATCTGCTGCATACCATGTACAATGATGAGTGTTTACAGCGTTTTTTTCCTCCTTATATTCATTCTTTTATCACATAGATGGACCTTGTGTATTTTGAACACACTTCCTTTTCCCCCTTGTTGTAGAGTGGACATGATACATGCTGTTGGTTCCCTTTGTAATAATAGAATGTTCAAGCTTAGTTACACTCTGTTTTGAAATGATATACTCTAAAA ]
[+] EMBL AK099263             [                                                                GAAGGATGATGCTGCTCGCCAAGGAGTTGGGCCTGTCGCCGCCGGCAGCGGTCACTCCTCGCCGGAGGCCGCCGCCTGCCAGGGTCCCCGCCTCTCCCTCCGGTGGCTCGCCCGTGGCCGTCGGAGACCTCTGGCTCCGGACCAAAGGAGCCGGAGGAGGAGGAGACGGGTTCGGGAGCCACAGCCACGAGAGCGAGATGGATTTGGCCATGCTCGTCACCGACTTCCTTGAGAACGGCGGCACCGGAGGCGCCGATTCCCGCGCCAGCAGCGACTCCGACTCCGCCCTCTCCGACCACCTCGCCGATAACATTTCTATCTACAAGCAAGGCGGCGATGAGAAAGAAAACGAGCTACTCTCCATGGTCCACTCGCTGTTATTCTCGATCCATGAGTCAGACCTTCTGGCTTTCAAAAGAGGTCAATGCAGTGCCAGCTGCATCCGTCATTTACTTGTGAAGCTCTTGAGATATTCGGGATATGATGCAGCTGTTTGCGTATCAAAATGGCAGGGATTCGACAAGATACCTGGAGGTGATCATGAGTATATCGATGTCATCATGAATAGTGATACTGAATATCGTCTGATCATTGATATCGACTTCAGGAGCCACTTTGAAATAGCCAGGGCTGTTGATTCTTATGACAGTCTGCTCAATTCACTTCCGGTGGTCTATGTTGGCACTCTTCCCAGACTGAAACAGTTCTTGCATGTTATGGTAGATGCTGCAAAATGGTCGCTTAAGCAGAACTCTATGCCTCTGCCTCCTTGGAGATCCTTGCCTTATCTCCAAGCAAAATGGCATTCCAAGTATGAGAGGATAGACCTGCACATTGAGCAAGACTTCCGCAGCACAGCTTCAGATCACGCACTATGCATTGGGCACCTCAAAAGGCTGAAATCCTCCCTGCAGTCAGAACTGGATACCGAAAGGTTGCTTATGATGCCAATCAAGACTGATATGAAGCGGAGGGCAAAGTTTGAGAGGCGGCGGCGCCGTTCCTTGCTCAGCTTCTGATTCATATTTGTGCTTCTTGGATACTGAAGTACTGAGAGAAGGAAGAATAGCTTCCCATACTTTTTTTCTGTGATAAAAGGAGTTCTTTTTAACAGTTTTGGACATACAAGGGAAATAGATGACGGGTACTAACAAGGCAGGAGAGTTGAGAGAGTGTGCCAGCTTTTTTTTGAAGGCATATACAAAAACATAAAATTCTTTTTGGATTTCATTTTTGTTCTTCCGGCGATGATGGCTGCTAGTGGTTAATCTGCTGCATACCATGTACAATGATGAGTGTTTACAGCGTTTTTTTCCTCCTTATATTCATTCTTTTATCACATAGATGGACCTTGTGTATTTTGAACACACTTCCTTTTCCCCCTTGTTGTAGAGTGGACATGATACATGCTGTTGGTTCCCTTTGTAATAATAGAATGTTCAAGCTTAGTTACACTCTGTTTTGAAATGATATACTCTAAAAT]
[+] EMBL AK099265             [                                                                GAAGGATGATGCTGCTCGCCAAGGAGTTGGGCCTGTCGCCGCCGGCAGCGGTCACTCCTCGCCGGAGGCCGCCGCCTGCCAGGGTCCCCGCCTCTCCCTCCGGTGGCTCGCCCGTGGCCGTCGGAGACCTCTGGCTCCGGACCAAAGGAGCCGGAGGAGGAGGAGACGGGTTCGGGAGCCACAGCCACGAGAGCGAGATGGATTTGGCCATGCTCGTCACCGACTTCCTTGAGAACGGCGGCACCGGAGGCGCCGATTCCCGCGCCAGCAGCGACTCCGACTCCGCCCTCTCCGACCACCTCGCCGATAACATTTCTATCTACAAGCAAGGCGGCGATGAGAAAGAAAACGAGCTACTCTCCATGGTCCACTCGCTGTTATTCTCGATCCATGAGTCAGACCTTCTGGCTTTCAAAAGAGGTCAATGCAGTGCCAGCTGCATCCGTCATTTACTTGTGAAGCTCTTGAGATATTCGGGATATGATGCAGCTGTTTGCGTATCAAAATGGCAGGGATTCGACAAGATACCTGGAGGTGATCATGAGTATATCGATGTCATCATGAATAGTGATACTGAATATCGTCTGATCATTGATATCGACTTCAGGAGCCACTTTGAAATAGCCAGGGCTGTTGATTCTTATGACAGTCTGCTCAATTCACTTCCGGTGGTCTATGTTGGCACTCTTCCCAGACTGAAACAGTTCTTGCATGTTATGGTAGATGCTGCAAAATGGTCGCTTAAGCAGAACTCTATGCCTCTGCCTCCTTGGAGATCCTTGCCTTATCTCCAAGCAAAATGGCATTCCAAGTATGAGAGGATAGACCTGCACATTGAGCAAGACTTCCGCAGCACAGCTTCAGATCACGCACTATGCATTGGGCACCTCAAAAGGCTGAAATCCTCCCTGCAGTCAGAACTGGATACCGAAAGGTTGCTTATGATGCCAATCAAGACTGATATGAAGCGGAGGGCAAAGTTTGAGAGGCGGCGGCGCCGTTCCTTGCTCAGCTTCTGATTCATATTTGTGCTTCTTGGATACTGAAGTACTGAGAGAAGGAAGAATAGCTTCCCATACTTTTTTTCTGTGATAAAAGGAGTTCTTTTTAACAGTTTTGGACATACAAGGGAAATAGATGACGGGTACTAACAAGGCAGGAGAGTTGAGAGAGTGTGCCAGCTTTTTTTTGAAGGCATATACAAAAACATAAAATTCTTTTTGGATTTCATTTTTGTTCTTCCGGCGATGATGGCTGCTAGTGGTTAATCTGCTGCATACCATGTACAATGATGAGTGTTTACAGCGTTTTTTTCCTCCTTATATTCATTCTTTTATCACATAGATGGACCTTGTGTATTTTGAACACACTTCCTTTTCCCCCTTGTTGTAGAGTGGACATGATACATGCTGTTGGTTCCCTTTGTAATAATAGAATGTTCAAGCTTAGTTACACTCTGTTTTGAAATGATATACTCTAAAAT]
[+] EMBL OSS13151A            [                                                                           CTGCTCGCCAAGNAGTTGGGCCTGTNGCCGCCGGCAGCGGTCACTCCTCGCCGGA GCCGCCGCCTGCCAGGNTCCCCGCCTCTCCCTCCGGTGGCTCGCCCGTGGCCGTCGGAGACCTCTGGCTCCGGACCAAAGGAGCCGGAGGAGGAGGAGACGGGTTCGGGAGCCACAGCCACGAGAGCNAGATGGATTTGGCCATGCTCGTCAACGACTTCCTTGAGAACGGCGGCACCGGAGGCGCCGATTCCNGCGCCAGAAGCGACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]


>consensus_10356#0 CCACCCCGCTGAGCCATCATTTCTCTCAAATTTCTCCTCCTCCAATCCAAGGCCCCAAGG AATTGAAGGATGATGCTGCTCGCCAAGGAGTTGGGCCTGTCGCCGCCGGCAGCGGTCACT CCTCGCCGGAGGCCGCCGCCTGCCAGGGTCCCCGCCTCTCCCTCCGGTGGCTCGCCCGTG GCCGTCGGAGACCTCTGGCTCCGGACCAAAGGAGCCGGAGGAGGAGGAGACGGGTTCGGG AGCCACAGCCACGAGAGCGAGATGGATTTGGCCATGCTCGTCACCGACTTCCTTGAGAAC GGCGGCACCGGAGGCGCCGATTCCCGCGCCAGCAGCGACTCCGACTCCGCCCTCTCCGAC CACCTCGCCGATAACATTTCTATCTACAAGCAAGGCGGCGATGAGAAAGAAAACGAGCTA CTCTCCATGGTCCACTCGCTGTTATTCTCGATCCATGAGTCAGACCTTCTGGCTTTCAAA AGAGGTCAATGCAGTGCCAGCTGCATCCGTCATTTACTTGTGAAGCTCTTGAGATATTCG GGATATGATGCAGCTGTTTGCGTATCAAAATGGCAGGGATTCGACAAGATACCTGGAGGT GATCATGAGTATATCGATGTCATCATGAATAGTGATACTGAATATCGTCTGATCATTGAT ATCGACTTCAGGAGCCACTTTGAAATAGCCAGGGCTGTTGATTCTTATGACAGTCTGCTC AATTCACTTCCGGTGGTCTATGTTGGCACTCTTCCCAGACTGAAACAGTTCTTGCATGTT ATGGTAGATGCTGCAAAATGGTCGCTTAAGCAGAACTCTATGCCTCTGCCTCCTTGGAGA TCCTTGCCTTATCTCCAAGCAAAATGGCATTCCAAGTATGAGAGGATAGACCTGCACATT GAGCAAGACTTCCGCAGCACAGCTTCAGATCACGCACTATGCATTGGGCACCTCAAAAGG CTGAAATCCTCCCTGCAGTCAGAACTGGATACCGAAAGGTTGCTTATGATGCCAATCAAG ACTGATATGAAGCGGAGGGCAAAGTTTGAGAGGCGGCGGCGCCGTTCCTTGCTCAGCTTC TGATTCATATTTGTGCTTCTTGGATACTGAAGTACTGAGAGAAGGAAGAATAGCTTCCCA TACTTTTTTTCTGTGATAAAAGGAGTTCTTTTTAACAGTTTTGGACATACAAGGGAAATA GATGACGGGTACTAACAAGGCAGGAGAGTTGAGAGAGTGTGCCAGCTTTTTTTTGAAGGC ATATACAAAAACATAAAATTCTTTTTGGATTTCATTTTTGTTCTTCCGGCGATGATGGCT GCTAGTGGTTAATCTGCTGCATACCATGTACAATGATGAGTGTTTACAGCGTTTTTTTCC TCCTTATATTCATTCTTTTATCACATAGATGGACCTTGTGTATTTTGAACACACTTCCTT TTCCCCCTTGTTGTAGAGTGGACATGATACATGCTGTTGGTTCCCTTTGTAATAATAGAA TGTTCAAGCTTAGTTACACTCTGTTTTGAAATGATATACTCTAAAAT



consensusID : consensus_10356#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 435
fasta sequence
                              [TCTTGGATACTGAAGTACTGAGAGAAGGAAGAATAGCTTCCCATACTTTTTTTNTGTGATAAAAGGAGTTNTTTTTAACAGTTTTGGACATACAAGGGAAATAGATGACGGGTACTAACAAGGCAGGAGAGTTGAGAGAGTGTGCCAGCTTTTTTTTGAAGGCATATACAAAAACATAAAATTCTTTTTGGATTTCATTTTTGTTCTTCCGGCGATGATGGCTGCTAGTGGTTAATNTGCTGCATACCATGTACAATGATGAGTGTTTACAGCGTTTTTTTCCTCCTTATATTCATTCTTTTATCACATAGATGGACCTTGTGTATTTTGAACACACTTCCTTTTCCCCCTTGTTGTAGAGTGGACATGATACATGCTGTTGGTTCCCTTTGTAATAATAGAATGTTCAAGCTTAGTTCAAAAAAAAAAAAAAAA]

[+] EMBL AU174391             [TCTTGGATACTGAAGTACTGAGAGAAGGAAGAATAGCTTCCCATACTTTTTTTNTGTGATAAAAGGAGTTNTTTTTAACAGTTTTGGACATACAAGGGAAATAGATGACGGGTACTAACAAGGCAGGAGAGTTGAGAGAGTGTGCCAGCTTTTTTTTGAAGGCATATACAAAAACATAAAATTCTTTTTGGATTTCATTTTTGTTCTTCCGGCGATGATGGCTGCTAGTGGTTAATNTGCTGCATACCATGTACAATGATGAGTGTTTACAGCGTTTTTTTCCTCCTTATATTCATTCTTTTATCACATAGATGGACCTTGTGTATTTTGAACACACTTCCTTTTCCCCCTTGTTGTAGAGTGGACATGATACATGCTGTTGGTTCCCTTTGTAATAATAGAATGTTCAAGCTTAGTTCAAAAAAAAAAAAAAAA]


>consensus_10356#1 TCTTGGATACTGAAGTACTGAGAGAAGGAAGAATAGCTTCCCATACTTTTTTTNTGTGAT AAAAGGAGTTNTTTTTAACAGTTTTGGACATACAAGGGAAATAGATGACGGGTACTAACA AGGCAGGAGAGTTGAGAGAGTGTGCCAGCTTTTTTTTGAAGGCATATACAAAAACATAAA ATTCTTTTTGGATTTCATTTTTGTTCTTCCGGCGATGATGGCTGCTAGTGGTTAATNTGC TGCATACCATGTACAATGATGAGTGTTTACAGCGTTTTTTTCCTCCTTATATTCATTCTT TTATCACATAGATGGACCTTGTGTATTTTGAACACACTTCCTTTTCCCCCTTGTTGTAGA GTGGACATGATACATGCTGTTGGTTCCCTTTGTAATAATAGAATGTTCAAGCTTAGTTCA AAAAAAAAAAAAAAA



consensusID : consensus_10356#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 357
fasta sequence
                              [AAGGGAAATAGATGACGGGTACTAACAAGGCCAGGAGAGTTGAGAGAGTGTGCCAGCTTTTTTTTGAAGGCATATACAAAAACATAAAATTCTTTTTGGATTTCATTTTTGTTCTTCCGGCGATGATGGCTGCTAGTGGTTAATCTGCTGCATACCATGTACAATGATGAGTGTTTACAGCGTTTTTTTCCTCCTTATATTCATTCTTTTATCACATAGATGGACCTTGTGTATTTTGAACACACTTCCTTTTCCCCCTTGTTGTAGAGTGGACATGATACATGCTGTTGGTTCCCTTTGTAATAATAGAATGTTCAAGCTTAGTTACACTCTGTTTTGAAAAAAAAAAAAAAAAAA]

[+] EMBL AU101759             [AAGGGAAATAGATGACGGGTACTAACAAGGCCAGGAGAGTTGAGAGAGTGTGCCAGCTTTTTTTTGAAGGCATATACAAAAACATAAAATTCTTTTTGGATTTCATTTTTGTTCTTCCGGCGATGATGGCTGCTAGTGGTTAATCTGCTGCATACCATGTACAATGATGAGTGTTTACAGCGTTTTTTTCCTCCTTATATTCATTCTTTTATCACATAGATGGACCTTGTGTATTTTGAACACACTTCCTTTTCCCCCTTGTTGTAGAGTGGACATGATACATGCTGTTGGTTCCCTTTGTAATAATAGAATGTTCAAGCTTAGTTACACTCTGTTTTGAAAAAAAAAAAAAAAAAA]


>consensus_10356#2 AAGGGAAATAGATGACGGGTACTAACAAGGCCAGGAGAGTTGAGAGAGTGTGCCAGCTTT TTTTTGAAGGCATATACAAAAACATAAAATTCTTTTTGGATTTCATTTTTGTTCTTCCGG CGATGATGGCTGCTAGTGGTTAATCTGCTGCATACCATGTACAATGATGAGTGTTTACAG CGTTTTTTTCCTCCTTATATTCATTCTTTTATCACATAGATGGACCTTGTGTATTTTGAA CACACTTCCTTTTCCCCCTTGTTGTAGAGTGGACATGATACATGCTGTTGGTTCCCTTTG TAATAATAGAATGTTCAAGCTTAGTTACACTCTGTTTTGAAAAAAAAAAAAAAAAAA



consensusID : consensus_10356#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 261
fasta sequence
                              [CGCGGACGTGGTNGTCNANAAATGGNCATNNAAGCAGAACTCTATGCCTCTCCCTCCTTGGAGATCCTTGCCTTATCTCCAAGCAAAATGGCATTCCAAGTATGANAGGATAGACCTGCACATTGAGCAANACTTCCACAGCACAGCTTCANATCACGCACTATGCATTGGGCACCTNAAAAGGCTGAAATCCTCCCTGCAGTCAGAACTGGTTACCGCAAGGTTNCTTATGATGCCAATCANGACTGATATGAAGCGGNG]

[+] EMBL AU066288             [CGCGGACGTGGTNGTCNANAAATGGNCATNNAAGCAGAACTCTATGCCTCTCCCTCCTTGGAGATCCTTGCCTTATCTCCAAGCAAAATGGCATTCCAAGTATGANAGGATAGACCTGCACATTGAGCAANACTTCCACAGCACAGCTTCANATCACGCACTATGCATTGGGCACCTNAAAAGGCTGAAATCCTCCCTGCAGTCAGAACTGGTTACCGCAAGGTTNCTTATGATGCCAATCANGACTGATATGAAGCGGNG]


>consensus_10356#3 CGCGGACGTGGTNGTCNANAAATGGNCATNNAAGCAGAACTCTATGCCTCTCCCTCCTTG GAGATCCTTGCCTTATCTCCAAGCAAAATGGCATTCCAAGTATGANAGGATAGACCTGCA CATTGAGCAANACTTCCACAGCACAGCTTCANATCACGCACTATGCATTGGGCACCTNAA AAGGCTGAAATCCTCCCTGCAGTCAGAACTGGTTACCGCAAGGTTNCTTATGATGCCAAT CANGACTGATATGAAGCGGNG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10356#1      ------------------------------------------------------------
consensus_10356#2      ------------------------------------------------------------
consensus_10356#0      CCACCCCGCTGAGCCATCATTTCTCTCAAATTTCTCCTCCTCCAATCCAAGGCCCCAAGG 60
consensus_10356#3      ------------------------------------------------------------
                                                                                   

consensus_10356#1      ------------------------------------------------------------
consensus_10356#2      ------------------------------------------------------------
consensus_10356#0      AATTGAAGGATGATGCTGCTCGCCAAGGAGTTGGGCCTGTCGCCGCCGGCAGCGGTCACT 120
consensus_10356#3      ------------------------------------------------------------
                                                                                   

consensus_10356#1      ------------------------------------------------------------
consensus_10356#2      ------------------------------------------------------------
consensus_10356#0      CCTCGCCGGAGGCCGCCGCCTGCCAGGGTCCCCGCCTCTCCCTCCGGTGGCTCGCCCGTG 180
consensus_10356#3      ------------------------------------------------------------
                                                                                   

consensus_10356#1      ------------------------------------------------------------
consensus_10356#2      ------------------------------------------------------------
consensus_10356#0      GCCGTCGGAGACCTCTGGCTCCGGACCAAAGGAGCCGGAGGAGGAGGAGACGGGTTCGGG 240
consensus_10356#3      ------------------------------------------------------------
                                                                                   

consensus_10356#1      ------------------------------------------------------------
consensus_10356#2      ------------------------------------------------------------
consensus_10356#0      AGCCACAGCCACGAGAGCGAGATGGATTTGGCCATGCTCGTCACCGACTTCCTTGAGAAC 300
consensus_10356#3      ------------------------------------------------------------
                                                                                   

consensus_10356#1      ------------------------------------------------------------
consensus_10356#2      ------------------------------------------------------------
consensus_10356#0      GGCGGCACCGGAGGCGCCGATTCCCGCGCCAGCAGCGACTCCGACTCCGCCCTCTCCGAC 360
consensus_10356#3      ------------------------------------------------------------
                                                                                   

consensus_10356#1      ------------------------------------------------------------
consensus_10356#2      ------------------------------------------------------------
consensus_10356#0      CACCTCGCCGATAACATTTCTATCTACAAGCAAGGCGGCGATGAGAAAGAAAACGAGCTA 420
consensus_10356#3      ------------------------------------------------------------
                                                                                   

consensus_10356#1      ------------------------------------------------------------
consensus_10356#2      ------------------------------------------------------------
consensus_10356#0      CTCTCCATGGTCCACTCGCTGTTATTCTCGATCCATGAGTCAGACCTTCTGGCTTTCAAA 480
consensus_10356#3      ------------------------------------------------------------
                                                                                   

consensus_10356#1      ------------------------------------------------------------
consensus_10356#2      ------------------------------------------------------------
consensus_10356#0      AGAGGTCAATGCAGTGCCAGCTGCATCCGTCATTTACTTGTGAAGCTCTTGAGATATTCG 540
consensus_10356#3      ------------------------------------------------------------
                                                                                   

consensus_10356#1      ------------------------------------------------------------
consensus_10356#2      ------------------------------------------------------------
consensus_10356#0      GGATATGATGCAGCTGTTTGCGTATCAAAATGGCAGGGATTCGACAAGATACCTGGAGGT 600
consensus_10356#3      ------------------------------------------------------------
                                                                                   

consensus_10356#1      ------------------------------------------------------------
consensus_10356#2      ------------------------------------------------------------
consensus_10356#0      GATCATGAGTATATCGATGTCATCATGAATAGTGATACTGAATATCGTCTGATCATTGAT 660
consensus_10356#3      ------------------------------------------------------------
                                                                                   

consensus_10356#1      ------------------------------------------------------------
consensus_10356#2      ------------------------------------------------------------
consensus_10356#0      ATCGACTTCAGGAGCCACTTTGAAATAGCCAGGGCTGTTGATTCTTATGACAGTCTGCTC 720
consensus_10356#3      ------------------------------------------------------------
                                                                                   

consensus_10356#1      ------------------------------------------------------------
consensus_10356#2      ------------------------------------------------------------
consensus_10356#0      AATTCACTTCCGGTGGTCTATGTTGGCACTCTTCCCAGACTGAAACAGTTCTTGCATGTT 780
consensus_10356#3      ------------------------------------------------------------
                                                                                   

consensus_10356#1      ------------------------------------------------------------
consensus_10356#2      ------------------------------------------------------------
consensus_10356#0      ATGGTAGATGCTGCAAAATGGTCGCTTAAGCAGAACTCTATGCCTCTGCCTCCTTGGAGA 840
consensus_10356#3      ------------------------------------------------------------
                                                                                   

consensus_10356#1      ------------------------------------------------------------
consensus_10356#2      ------------------------------------------------------------
consensus_10356#0      TCCTTGCCTTATCTCCAAGCAAAATGGCATTCCAAGTATGAGAGGATAGACCTGCACATT 900
consensus_10356#3      ------------------------------------------------------------
                                                                                   

consensus_10356#1      ------------------------------------------------------------
consensus_10356#2      ------------------------------------------------------------
consensus_10356#0      GAGCAAGACTTCCGCAGCACAGCTTCAGATCACGCACTATGCATTGGGCACCTCAAAAGG 960
consensus_10356#3      ------------------------------------------------------------
                                                                                   

consensus_10356#1      ------------------------------------------------------------
consensus_10356#2      ------------------------------------------------------------
consensus_10356#0      CTGAAATCCTCCCTGCAGTCAGAACTGGATACCGAAAGGTTGCTTATGATGCCAATCAAG 1020
consensus_10356#3      ------------------------------------------------------------
                                                                                   

consensus_10356#1      ------------------------------------------------------------
consensus_10356#2      ------------------------------------------------------------
consensus_10356#0      ACTGATATGAAGCGGAGGGCAAAGTTTGAGAGGCGGCGGCGCCGTTCCTTGCTCAGCTTC 1080
consensus_10356#3      ------------------------------------------------------------
                                                                                   

consensus_10356#1      -----------------TCTTGGATACTGAAGTACTGAGAGAAGGAAGAATAGCTTCCCA 43
consensus_10356#2      ------------------------------------------------------------
consensus_10356#0      TGATTCATATTTGTGCTTCTTGGATACTGAAGTACTGAGAGAAGGAAGAATAGCTTCCCA 1140
consensus_10356#3      ------------------------------------------------------------
                                                                                   

consensus_10356#1      TACTTTTTTTNTGTGATAAAAGGAGTTNTTTTTAACAGTTTTGGACATACAAGGGAAATA 103
consensus_10356#2      --------------------------------------------------AAGGGAAATA 10
consensus_10356#0      TACTTTTTTTCTGTGATAAAAGGAGTTCTTTTTAACAGTTTTGGACATACAAGGGAAATA 1200
consensus_10356#3      ------------------------------------------------------------
                                                                                   

consensus_10356#1      GATGACGGGTACTAACAAGGC-AGGAGAGTTGAGAGAGTGTGCCAGCTTTTTTTTGAAGG 162
consensus_10356#2      GATGACGGGTACTAACAAGGCCAGGAGAGTTGAGAGAGTGTGCCAGCTTTTTTTTGAAGG 70
consensus_10356#0      GATGACGGGTACTAACAAGGC-AGGAGAGTTGAGAGAGTGTGCCAGCTTTTTTTTGAAGG 1259
consensus_10356#3      ----------------------------------------CGCGGACGTGGTNGTCNANA 20
                                                                **   * *  *  *  *  

consensus_10356#1      CATATACAAAAACATAAAATTCTTTTTGGATTTCATTTTTGTTCTTCCGGCGATGATGGC 222
consensus_10356#2      CATATACAAAAACATAAAATTCTTTTTGGATTTCATTTTTGTTCTTCCGGCGATGATGGC 130
consensus_10356#0      CATATACAAAAACATAAAATTCTTTTTGGATTTCATTTTTGTTCTTCCGGCGATGATGGC 1319
consensus_10356#3      AATGGNCATNNAAGCAGAACTCTATGCCTCTCCCTCCTTGGAGATCCTTGCCTT---ATC 77
                        **   **   *   * ** *** *     *  *   ** *   * *  **  *     *

consensus_10356#1      TGCTAGTGGTTAATNTGCTGCATACCATGTACAAT--GATGAGTGTTTACAGCGTTTTTT 280
consensus_10356#2      TGCTAGTGGTTAATCTGCTGCATACCATGTACAAT--GATGAGTGTTTACAGCGTTTTTT 188
consensus_10356#0      TGCTAGTGGTTAATCTGCTGCATACCATGTACAAT--GATGAGTGTTTACAGCGTTTTTT 1377
consensus_10356#3      TCCAAGCAA--AATG----GCATTCCAAGTATGANAGGATAGACCTGCACATTGAGCAAN 131
                       * * **     ***     **** *** ***  *   ***     *  ***  *      

consensus_10356#1      TCCTCCTTATATTCATTCTTTTATCACATAGATGGACCTTGTGTATTTTGAACACACTTC 340
consensus_10356#2      TCCTCCTTATATTCATTCTTTTATCACATAGATGGACCTTGTGTATTTTGAACACACTTC 248
consensus_10356#0      TCCTCCTTATATTCATTCTTTTATCACATAGATGGACCTTGTGTATTTTGAACACACTTC 1437
consensus_10356#3      ACTTCCACA-GCACAGCTTCANATCACGCAC-TATGCATTGGGCACCTNAAA-AGGCTGA 188
                        * ***  *    **   *   *****  *  *   * *** * *  *  ** *  **  

consensus_10356#1      CTTTTCCCCCTTGTTGTAGAGTGGACATGATACATGCTGTTGGTTCCCTTTGTAATAATA 400
consensus_10356#2      CTTTTCCCCCTTGTTGTAGAGTGGACATGATACATGCTGTTGGTTCCCTTTGTAATAATA 308
consensus_10356#0      CTTTTCCCCCTTGTTGTAGAGTGGACATGATACATGCTGTTGGTTCCCTTTGTAATAATA 1497
consensus_10356#3      AATCCTCCCTGCAGTCAGAACTGGTTACCGCA-AGGTTNCTTATGATGCCAATCANGACT 247
                         *   ***     *    * ***  *    * * * *  *  *        * *  *  

consensus_10356#1      GAATGTTCAAGCTTAGTT-----------CAAAAAAAAAAAAAAAA---- 435
consensus_10356#2      GAATGTTCAAGCTTAGTTACACTCTGTTTTGAAAAAAAAAAAAAAAAAA- 357
consensus_10356#0      GAATGTTCAAGCTTAGTTACACTCTGTTTTGAAATGATATACTCTAAAAT 1547
consensus_10356#3      GATA--TGAAGCGGNG---------------------------------- 261
                       **    * ****   *                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)