|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10357#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 3957 fasta sequence
[CCGATCAGACGCCTAGTTTAGGGTTTCAGAGCTTTCTCCCCACCTCTCCCCTCCCCTCCCCCCCCTCTCTCTGTCGTCCTCTTCCTCCCGCTCGCGTCCGCCATTGACGCGGCGCGGCGCACGAGCTCCCCCTCAGATCTGACCAATCCACACCGCGAACCCTCTCACCTGACGCAACCCCGAATCTTGCCTGGAACGGCGAAGAATTCGAACACAAATCTGAAGCACACCGTCGTCACTAAGACCACACACTACATCTGATTTTTTTTTGTTTCTCCACACCCTGATTGTTTCTAGATTTTTTTTTATTCTCGTTTCGGACGCTTCATAAGAACAGATCTGCGAGCGAGTTCGCGGATCTTATCTATCTGTGTGAGAACCAAGACCCTTTTGTTGCCTGTGGACACGATCCGAACGAACTTTGACCTGAGGATTCGTTTGAGATCTGTTTGCTGCTGGTCTCGAGAGAATGATCAGGTCGATGGTATATTTCGGGAACACCTCCATCGGCGAGGTGGAGGTGTGGCCCAGCGGCGACGCGAGCCTGGCAGCGGCAGCGTGGGCTCGAGAGATCCGCGTTGACCGCCTTTCCCCGCCCAGCGAGCGGTGCCAGCCGCTCGCCGTGATGCATACCGTGGCCGTCGGTGCTCGCTGCCTCGTCATGGAGTCCAGGCTGCCCAAGGCAGCGGATGAGCCACCCCAGCCTCTCGTCGCCATGCACGCTGCTTGCCTCAAGGAAAACAAGACTGCAGTTGTTCCACTAGGAGAGGAAGAATTGCATTTAGTGGCAATGACATCCAGGAGAAACCTGACAAATCACGCATGTTTCTGGGGATATAAAGTGCCATTTGGTTTGTACAATTCTTGCTTGACTATGTTAAATCTCCGGTGCCTTGGGATCGTATTTGACCTTGATGAGACACTGATTGTCGCCAATACTACACGGTCTTTTGAGGACAGAATTGACGCGCTTCAGAGAAAGTTGAGCAATGAGACTGATCCACAGCGCATAAACGGTATGATAGCGGAGATTAAGAGGTACCAAGATGATAAGTCTATCCTAAAGCAGTACATTGAAGGTGATCAGGTCTATGATGATGGAAAAATGTATAAAGTGCAACCTGAGTTGGTTCCGCCATTATCCGATAACCATCAACCAATGACACGTCCAGTTATACGATTACAAGAGAAGAATATTATCTTGACGAGAATAAATCCTTTGATAAGGGATACCAGTGTTCTTGTACGTTTAAGGCCAGCATGGGAGGATCTCCGGAGCTACTTGATTGCTAGAGGTCGCAAACGTTTTGAGGTCTATGTGTGTACAATGGCTGAGAGAGACTACGCCTTAGAAATGTGGAGGTTGCTTGATCCAGACTCAAGATTGATTAACTCTGTTCAACTTAATGACAGAATGGTGTGTGTAAAATCTGGTTTAAGAAAGTCCTTGCTGAATGTTTTCCATGATGGATCCTGCCATCCTGGAATGGCCCTAGTAATTGATGACCGACTCAAAGTCTGGGATGAGAAGGATCAATCTAGAGTTCATGTGGTTCCTGCATTCACTCCATATTATGCACCACAAGCAGAGGCAAACTGTTCTATCCCAGTTCTCTGTGTCGCCAGGAATGTTGCATGCAATGTTAGAGGGGGCTTCTTTAAGGACTTTGATGAAGGCCTCTTACCAAGAATTAGCAATGTTTTTTATGAGGATGAAATCAATGAAATCCCATCTGCTCCAGATGTTGGCAATTATTTGATTTCAGAGGATGAGAATGTTGCGGCAGTGAATGGAAACAGGGATCCATTGGCTTTTGATGGTATGGCTGATGCTGAGGTTGAAAGGAGAATGAAGGAAGCATCTGGAAATGCTCAAGCTTTTACTACAACAGCAGCTAACTTTGTGATGCCAGTACTCCCTGGTCAAAATTTCGTTTCATCTTCAGTAGCACCAGTAGCCCCATCCCTTGGCATGGTGCCTTTGAGTAATAATCAGGGTCCACCTCCATTCACTCAACCAGTTGCTCAACTGAGTCTCTCAGATCCACTGCAAGGCTCTCCAGCTAGGGAAGAGGGTGAAGTTCCTGAGTCAGAGTTAGATCCTGACACAAGGAGAAGACTTCTTATATTACAACATGGTCAAGACACCAGAGATCCTACACCTCCTCTTCCAGCAGTACCTCCTGTTCAAGTCCCAGTTCCTCCAGTTCAACCTCATGGAAATTGGTTTCCTGTAGAGGATGGCATGAATCCAAATAATCTAAACAGGGGTTCTGCAGGGTTCCCTTTGGAATCTGAAACTATGCACTATGATAAAAAGCAACTACCTCACCCATTCTTTCATGGTGGGGAAAACCCTATATCCTCTGATAGATTTAGTTATCAGAACCAGAGGTATCCCTCCCAGCTACCGCATAGTGAAGATCATCGCGTTCTTCAGAACCATGCACCGTCAAGATACAGATCCTTCCCTGGAGAGGAGCTAGCAACTCGGCATGTTTCTTCAAGTCAGAGAAACAACCAGATAGTACCAGGACAACACTTTGCTCGGCATGCAGGGAGCTCTGCTGGCATACTAGAGGAGATTGCTATGAAGTGTGGTTCTAAGGTGGAGTACAGGTCAGCACTATGTGATACTGCGGATTTACAGTTCTCAATCGAGGTTTGGATTGTTGGAGAAAAAGTAGGCGAAGGCATTGGCAGGACAAGGAAAGAAGCACAGTGTCAAGCTGCAGAAATCTCATTAAGAAATTTAGCTAATAAATATCTGTCATCTGATCCAAATAAGATGACTGATATGAAAGAAAATGGTTTTGGTAGCAATACAAACATTTTTGGATACCCTGGAAATAGTAGGGACGATGTGTTACCAATTGCAAGTACTTCAGAAGAAACTCGCTTTGTGAAGATGGGGGAGAACAATTCCAGAAAAGCAGGAGGTTCTATTGCTGCTCTCAAGGAACTTTGCACAGCTGAGGGATATAACTTAGTTTTTCAAGCTCGGACATCTCCTGATAGTTCAGTAGGCAAAGAAGCTTATGCTGAGGTAGAAGTTTGTGGGCAAATTCTAGGCAACGGAGTGGGAATAACATGGGAAGATGCTAAGCTTCAGGCTGCTGATGAAGCTCTTGGAATGTTGAGATCCATGCTTGGTCCACTTGCTCAGAAACGGTCCAGTTCTCCAAGGTCACTGGCACCCAGTTTTGATAAGCGCTTCAAGCCAGATTTTCCACGGGCAGTGCAAAGGGTTCCTTATGGTAGATATTCCCGAATTGAAGGCCATGTTCCTTGACATTTTAACGGATACATTGGTTCTAAACTCTGGATTTTTTAGCTAGATGAGACGTATCAACTTTGCAGAGAATAAAAACCATGACA-CCCGGTCATCTTGC-GCGGCTTCTACTGGAAACATGGATGGTTGTGGATGCACCAAG-AAATTGCAAGCAATTGTGGTGG-CCATGTCTTCATGCTG-ATACTTGCTTTGGGTCTGATCTCACGTTAATTGACATGTTTGACTTGAAGTGTGCCCATCC--TTGTGGATACCCAGACGTACCGCTTCCGTGGGGGCTTGTGCAGCTTCTGTCCTGCTTGGGGGAACTTCAATCCGTGGCTGCAGAGGCGCTGCGACCGTTTTAACATTTTGTTTGTAGGATAAGTTTGTAGCTTAGGTTTGGAGTAGGTAGCTAATTTTGTTGCGGTGGAAGTAGGTATTAATCCTACATTAAATCCCGTGTTTATTTTTTTAGGTCAATACTGACAAAAGTTCAGTAGCTAGATGTTTATTATTTGTTTCTTTATGTAGTCATTCTTTATTATGTTCTTGTCATTATTTGTAAAGATCTACGGTTTGTTGATTGTGTTGCCGGTGTAACCTCGCATCGCGGGGTGGCCTCTCGAATCTCTCGTATGTTGTCTCCTGCTGAAAAACTGTACACGTCTGCTGTGGTCGTGACTACG]
[+] EMBL AK067293 [CCGATCAGACGCCTAGTTTAGGGTTTCAGAGCTTTCTCCCCACCTCTCCCCTCCCCTCCCCCCCCTCTCTCTGTCGTCCTCTTCCTCCCGCTCGCGTCCGCCATTGACGCGGCGCGGCGCACGAGCTCCCCCTCAGATCTGACCAATCCACACCGCGAACCCTCTCACCTGACGCAACCCCGAATCTTGCCTGGAACGGCGAAGAATTCGAACACAAATCTGAAGCACACCGTCGTCACTAAGACCACACACTACATCTGATTTTTTTTTGTTTCTCCACACCCTGATTGTTTCTAGATTTTTTTTTATTCTCGTTTCGGACGCTTCATAAGAACAGATCTGCGAGCGAGTTCGCGGATCTTATCTATCTGTGTGAGAACCAAGACCCTTTTGTTGCCTGTGGACACGATCCGAACGAACTTTGACCTGAGGATTCGTTTGAGATCTGTTTGCTGCTGGTCTCGAGAGAATGATCAGGTCGATGGTATATTTCGGGAACACCTCCATCGGCGAGGTGGAGGTGTGGCCCAGCGGCGACGCGAGCCTGGCAGCGGCAGCGTGGGCTCGAGAGATCCGCGTTGACCGCCTTTCCCCGCCCAGCGAGCGGTGCCAGCCGCTCGCCGTGATGCATACCGTGGCCGTCGGTGCTCGCTGCCTCGTCATGGAGTCCAGGCTGCCCAAGGCAGCGGATGAGCCACCCCAGCCTCTCGTCGCCATGCACGCTGCTTGCCTCAAGGAAAACAAGACTGCAGTTGTTCCACTAGGAGAGGAAGAATTGCATTTAGTGGCAATGACATCCAGGAGAAACCTGACAAATCACGCATGTTTCTGGGGATATAAAGTGCCATTTGGTTTGTACAATTCTTGCTTGACTATGTTAAATCTCCGGTGCCTTGGGATCGTATTTGACCTTGATGAGACACTGATTGTCGCCAATACTACACGGTCTTTTGAGGACAGAATTGACGCGCTTCAGAGAAAGTTGAGCAATGAGACTGATCCACAGCGCATAAACGGTATGATAGCGGAGATTAAGAGGTACCAAGATGATAAGTCTATCCTAAAGCAGTACATTGAAGGTGATCAGGTCTATGATGATGGAAAAATGTATAAAGTGCAACCTGAGTTGGTTCCGCCATTATCCGATAACCATCAACCAATGACACGTCCAGTTATACGATTACAAGAGAAGAATATTATCTTGACGAGAATAAATCCTTTGATAAGGGATACCAGTGTTCTTGTACGTTTAAGGCCAGCATGGGAGGATCTCCGGAGCTACTTGATTGCTAGAGGTCGCAAACGTTTTGAGGTCTATGTGTGTACAATGGCTGAGAGAGACTACGCCTTAGAAATGTGGAGGTTGCTTGATCCAGACTCAAGATTGATTAACTCTGTTCAACTTAATGACAGAATGGTGTGTGTAAAATCTGGTTTAAGAAAGTCCTTGCTGAATGTTTTCCATGATGGATCCTGCCATCCTGGAATGGCCCTAGTAATTGATGACCGACTCAAAGTCTGGGATGAGAAGGATCAATCTAGAGTTCATGTGGTTCCTGCATTCACTCCATATTATGCACCACAAGCAGAGGCAAACTGTTCTATCCCAGTTCTCTGTGTCGCCAGGAATGTTGCATGCAATGTTAGAGGGGGCTTCTTTAAGGACTTTGATGAAGGCCTCTTACCAAGAATTAGCAATGTTTTTTATGAGGATGAAATCAATGAAATCCCATCTGCTCCAGATGTTGGCAATTATTTGATTTCAGAGGATGAGAATGTTGCGGCAGTGAATGGAAACAGGGATCCATTGGCTTTTGATGGTATGGCTGATGCTGAGGTTGAAAGGAGAATGAAGGAAGCATCTGGAAATGCTCAAGCTTTTACTACAACAGCAGCTAACTTTGTGATGCCAGTACTCCCTGGTCAAAATTTCGTTTCATCTTCAGTAGCACCAGTAGCCCCATCCCTTGGCATGGTGCCTTTGAGTAATAATCAGGGTCCACCTCCATTCACTCAACCAGTTGCTCAACTGAGTCTCTCAGATCCACTGCAAGGCTCTCCAGCTAGGGAAGAGGGTGAAGTTCCTGAGTCAGAGTTAGATCCTGACACAAGGAGAAGACTTCTTATATTACAACATGGTCAAGACACCAGAGATCCTACACCTCCTCTTCCAGCAGTACCTCCTGTTCAAGTCCCAGTTCCTCCAGTTCAACCTCATGGAAATTGGTTTCCTGTAGAGGATGGCATGAATCCAAATAATCTAAACAGGGGTTCTGCAGGGTTCCCTTTGGAATCTGAAACTATGCACTATGATAAAAAGCAACTACCTCACCCATTCTTTCATGGTGGGGAAAACCCTATATCCTCTGATAGATTTAGTTATCAGAACCAGAGGTATCCCTCCCAGCTACCGCATAGTGAAGATCATCGCGTTCTTCAGAACCATGCACCGTCAAGATACAGATCCTTCCCTGGAGAGGAGCTAGCAACTCGGCATGTTTCTTCAAGTCAGAGAAACAACCAGATAGTACCAGGACAACACTTTGCTCGGCATGCAGGGAGCTCTGCTGGCATACTAGAGGAGATTGCTATGAAGTGTGGTTCTAAGGTGGAGTACAGGTCAGCACTATGTGATACTGCGGATTTACAGTTCTCAATCGAGGTTTGGATTGTTGGAGAAAAAGTAGGCGAAGGCATTGGCAGGACAAGGAAAGAAGCACAGTGTCAAGCTGCAGAAATCTCATTAAGAAATTTAGCTAATAAATATCTGTCATCTGATCCAAATAAGATGACTGATATGAAAGAAAATGGTTTTGGTAGCAATACAAACATTTTTGGATACCCTGGAAATAGTAGGGACGATGTGTTACCAATTGCAAGTACTTCAGAAGAAACTCGCTTTGTGAAGATGGGGGAGAACAATTCCAGAAAAGCAGGAGGTTCTATTGCTGCTCTCAAGGAACTTTGCACAGCTGAGGGATATAACTTAGTTTTTCAAGCTCGGACATCTCCTGATAGTTCAGTAGGCAAAGAAGCTTATGCTGAGGTAGAAGTTTGTGGGCAAATTCTAGGCAACGGAGTGGGAATAACATGGGAAGATGCTAAGCTTCAGGCTGCTGATGAAGCTCTTGGAATGTTGAGATCCATGCTTGGTCCACTTGCTCAGAAACGGTCCAGTTCTCCAAGGTCACTGGCACCCAGTTTTGATAAGCGCTTCAAGCCAGATTTTCCACGGGCAGTGCAAAGGGTTCCTTATGGTAGATATTCCCGAATTGAAGGCCATGTTCCTTGACATTTTAACGGATACATTGGTTCTAAACTCTGGATTTTTTAGCTAGATGAGACGTATCAACTTTGCAGAGAATAAAAACCATGACA CCCGGTCATCTTGC GCGGCTTCTACTGGAAACATGGATGGTTGTGGATGCACCAAG AAATTGCAAGCAATTGTGGTGG CCATGTCTTCATGCTG ATACTTGCTTTGGGTCTGATCTCACGTTAATTGACATGTTTGACTTGAAGTGTGCCCATCC TTGTGGATACCCAGACGTACCGCTTCCGTGGGGGCTTGTGCAGCTTCTGTCCTGCTTGGGGGAACTTCAATCCGTGGCTGCAGAGGCGCTGCGACCGTTTTAACATTTTGTTTGTAGGATAAGTTTGTAGCTTAGGTTTGGAGTAGGTAGCTAATTTTGTTGCGGTGGAAGTAGGTATTAATCCTACATTAAATCCCGTGTTTATTTTTTTAGGTCAATACTGACAAAAGTTCAGTAGCTAGATGTTTATTATTTGTTTCTTTATGTAGTCATTCTTTATTATGTTCTTGTCATTATTTGTAAAGATCTACGGTTTGTTGATTGTGTTGCCGGTGTAACCTCGCATCGCGGGGTGGCCTCTCGAATCTCTCGTATGTTGTCTCCTGCTGAAAAACTGTACACGTCTGCTGTGGTCGTGACTACG]
[+] EMBL AK067711 [ CAGACGCCTAGTTTAGGGTTTCAGAGCTTTCTCCCCACCTCTCCCCTCCCCTCCCCCCCCTCTCTCTGTCGTCCTCTTCCTCCCGCTCGCGTCCGCCATTGACGCGGCGCGGCGCACGAGCTCCCCCTCAGATCTGACCAATCCACACCGCGAACCCTCTCACCTGACGCAACCCCGAATCTTGCCTGGAACGGCGAAGAATTCGAACACAAATCTGAAGCACACCGTCGTCACTAAGACCACACACTACATCTGATTTTTTTTTGTTTCTCCACACCCTGATTGTTTCTAGATTTTTTTTTATTCTCGTTTCGGACGCTTCATAAGAACAGATCTGCGAGCGAGTTCGCGGATCTTATCTATCTGTGTGAGAACCAAGACCCTTTTGTTGCCTGTGGACACGATCCGAACGAACTTTGACCTGAGGATTCGTTTGAGATCTGTTTGCTGCTGGTCTCGAGAGAATGATCAGGTCGATGGTATATTTCGGGAACACCTCCATCGGCGAGGTGGAGGTGTGGCCCAGCGGCGACGCGAGCCTGGCAGCGGCAGCGTGGGCTCGAGAGATCCGCGTTGACCGCCTTTCCCCGCCCAGCGAGCGGTGCCAGCCGCTCGCCGTGATGCATACCGTGGCCGTCGGTGCTCGCTGCCTCGTCATGGAGTCCAGGCTGCCCAAGGCAGCGGATGAGCCACCCCAGCCTCTCGTCGCCATGCACGCTGCTTGCCTCAAGGAAAACAAGACTGCAGTTGTTCCACTAGGAGAGGAAGAATTGCATTTAGTGGCAATGACATCCAGGAGAAACCTGACAAATCACGCATGTTTCTGGGGATATAAAGTGCCATTTGGTTTGTACAATTCTTGCTTGACTATGTTAAATCTCCGGTGCCTTGGGATCGTATTTGACCTTGATGAGACACTGATTGTCGCCAATACTACACGGTCTTTTGAGGACAGAATTGACGCGCTTCAGAGAAAGTTGAGCAATGAGACTGATCCACAGCGCATAAACGGTATGATAGCGGAGATTAAGAGGTACCAAGATGATAAGTCTATCCTAAAGCAGTACATTGAAGGTGATCAGGTCTATGATGATGGAAAAATGTATAAAGTGCAACCTGAGTTGGTTCCGCCATTATCCGATAACCATCAACCAATGACACGTCCAGTTATACGATTACAAGAGAAGAATATTATCTTGACGAGAATAAATCCTTTGATAAGGGATACCAGTGTTCTTGTACGTTTAAGGCCAGCATGGGAGGATCTCCGGAGCTACTTGATTGCTAGAGGTCGCAAACGTTTTGAGGTCTATGTGTGTACAATGGCTGAGAGAGACTACGCCTTAGAAATGTGGAGGTTGCTTGATCCAGACTCAAGATTGATTAACTCTGTTCAACTTAATGACAGAATGGTGTGTGTAAAATCTGGTTTAAGAAAGTCCTTGCTGAATGTTTTCCATGATGGATACTGCCATCCTGGAATGGCCCTAGTAATTGATGACCGACTCAAAGTCTGGGATGAGAAGGATCAATCTAGAGTTCATGTGGTTCCTGCATTCACTCCATATTATGCACCACAAGCAGAGGCAAACTGTTCTATCCCAGTTCTCTGTGTCGCCAGGAATGTTGCATGCAATGTTAGAGGGGGCTTCTTTAAGGACTTTGATGAAGGCCTCTTACCAAGAATTAGCAATGTTTTTTATGAGGATGAAATCAATGAAATCCCATCTGCTCCAGATGTTGGCAATTATTTGATTTCAGAGGATGAGAATGTTGCGGCAGTGAATGGAAACAGGGATCCATTGGCTTTTGATGGTATGGCTGATGCTGAGGTTGAAAGGAGAATGAAGGAAGCATCTGGAAATGCTCAAGCTTTTACTACAACAGCAGCTAACTTTGTGATGCCAGTACTCCCTGGTCAAAATTTCGTTTCATCTTCAGTAGCACCAGTAGCCCCATCCCTTGGCATGGTGCCTTTGAGTAATAATCAGGGTCCACCTCCATTCACTCAACCAGTTGCTCAACTGAGTCTCTCAGATCCACTGCAAGGCTCTCCAGCTAGGGAAGAGGGTGAAGTTCCTGAGTCAGAGTTAGATCCTGACACAAGGAGAAGACTTCTTATATTACAACATGGTCAAGACACCAGAGATCCTACACCTCCTCTTCCAGCAGTACCTCCTGTTCAAGTCCCAGTTCCTCCAGTTCAACCTCATGGAAATTGGTTTCCTGTAGAGGATGGCATGAATCCAAATAATCTAAACAGGGGTTCTGCAGGGTTCCCTTTGGAATCTGAAACTATGCACTATGATAAAAAGCAACTACCTCACCCATTCTTTCATGGTGGGGAAAACCCTATATCCTCTGATAGATTTAGTTATCAGAACCAGAGGTATCCCTCCCAGCTACCGCATAGTGAAGATCATCGCGTTCTTCAGAACCATGCACCGTCAAGATACAGATCCTTCCCTGGAGAGGAGCTAGCAACTCGGCATGTTTCTTCAAGTCAGAGAAACAACCAGATAGTACCAGGACAACACTTTGCTCGGCATGCAGGGAGCTCTGCTGGCATACTAGAGGAGATTGCTATGAAGTGTGGTTCTAAGGTGGAGTACAGGTCAGCACTATGTGATACTGCGGATTTACAGTTCTCAATCGAGGTTTGGATTGTTGGAGAAAAAGTAGGCGAAGGCATTGGCAGGACAAGGAAAGAAGCACAGTGTCAAGCTGCAGAAATCTCATTAAGAAATTTAGCTAATAAATATCTGTCATCTGATCCAAATAAGATGACTGATATGAAAGAAAATGGTTTTGGTAGCAATACAAACATTTTTGGATACCCTGGAAATAGTAGGGACGATGTGTTACCAATTGCAAGTACTTCAGAAGAAACTCGCTTTGTGAAGATGGGGGAGAACAATTCCAGAAAAGCAGGAGGTTCTATTGCTGCTCTCAAGGAACTTTGCACAGCTGAGGGATATAACTTAGTTTTTCAAGCTCGGACATCTCCTGATAGTTCAGTAGGCAAAGAAGCTTATGCTGAGGTAGAAGTTTGTGGGCAAATTCTAGGCAACGGAGTGGGAATAACATGGGAAGATGCTAAGCTTCAGGCTGCTGATGAAGCTCTTGGAATGTTGAGATCCATGCTTGGTCCACTTGCTCAGAAACGGTCCAGTTCTCCAAGGTCACTGGCACCCAGTTTTGATAAGCGCTTCAAGCCAGATTTTCCACGGGCAGTGCAAAGGGTTCCTTATGGTAGATATTCCCGAATTGAAGGCCATGTTCCTTGACATTTTAACGGATACATTGGTTCTAAACTCTGGATTTTTTAGCTAGATGAGACGTATCAACTTTGCAGAGAATAAAAACCATGACA CCCGGTCATCTTGC GCGGCTTCTACTGGAAACATGGATGGTTGTGGATGCACCAAG AAATTGCAAGCAATTGTGGTGG CCATGTCTTCATGCTG ATACTTGCTTTGGGTCTGATCTCACGTTAATTGACATGTTTGACTTGAAGTGTGCCCATCC TTGTGGATACCCAGACGTACCGCTTCCGTGGGGGCTTGTGCAGCTTCTGTCCTGCTTGGGGGAACTTCAATCCGTGGCTGCAGAGGCGCTGCGACCGTTTTAACATTTTGTTTGTAGGATAAGTTTGTAGCTTAGGTTTGGAGTAGGTAGCTAATTTTGTTGCGGTGGAAGTAGGTATTAATCCTACATTAAATCCCGTGTTTATTTTTTTAGGTCAATACTGACAAAAGTTCAGTAGCTAGATGTTTATTATTTGTTTCTTTATGTAGTCATTCTTTATTATGTTCTTGTCATTATTTGTAAAGATCTA ]
[+] EMBL CF323194 [ TTCACTCAACCAGTTGCTCAACTGAGTCTCTCAGATCCACTGCAAGGCTCTCCAGCTAGGGAAGAGGGTGAAGTTCCTGAGTCAGAGTTAGATCCTGACACAAGGAGAAGACTTCTTATATTACAACATGGTCAAGACACCAGAGATCCTACACCTCCTCTTCCAGCAGTACCTCCTGTTCAAGTCCCAGTTCCTCCAGTTCAACCTCATGGAAATTGGTTTCCTGTAGAGGATGGCATGAATCCAAATAATCTAAACAGGGGTTCTGCAGGGTTCCCTTTGGAATCTGAAACTATGCACTATGATAAAAAGCAACTACCTCACCCATTCTTTCATGGTGGGGAAAACCCTATATCCTCTGATAGATTTAGTTATCAGAACCAGAGGTATCCCTCCCAGCTACCGCATAGTGAAGATCATCGCGTTCTTCAGAACCATGCACCGTCAAGATACAGATCCTTCCCTGGAGAGGAGCTAGCAACTCGGCATGTTTCTTCAAGTCAGAGAAACAACCAGATAGTACCAGGACAACACTTTGCTCGGCATGCAGGGAGCTCTGCTGGC TACTAGAGGAGATTG TATGAAGTGTGGTTCTAGGGTGGAGTACAGGTCAGCACTATGTGATACTG ]
[+] EMBL OSS13984A [ AGTTCTCCAAGGTCACTGGCACCCAGTTTTGATAAGCGCTTCAAGCCAGATTTTCCACGGGCAGTGCAAAGGGTTCCTTATGGTAGATATTCCCGAATTGAAGGCCATGTTCCTTGACATTTTAACGGATACATTGGTTCTAAACTCTGGATTTTTTAGCTAGATGAGACGTATCAACTTTGCAGAGAATAAAAACCATGACACCCCGGTCATCTTTCGGGGGCTTCTACTtg ]
[+] EMBL AU162984 [ CCAAGAAAATTGCAAGCAATTGTGGTGGCCCATGTCTTCATGCTGAATACTTGCTTTGGGTCTGATCTCACGTTAATTGACATGTTTGACTTGAAGTGTGCCCATCCCTTTGTGGATACCCAGACGTACCGCTTCCGTGGGGGCTTGTGCAGCTTCTGTCCTGCTTGGGGGAACTTCAATCCGTGGCTGCAGAGGCGCTGCGACCGTTTTAACATTTTGTTTGTAGGATAAGTTTGTAGCTTAGGTTTGGAGTAGGTAGCTAATTTTGTTGCGGTGGAAGTAGGTATTAATCCTACATTAAATCCCGTGTTTATTTTTTTAGGTCAATACTGACAAAAGTTCAGTAGCTAGATGTTTATTATTTGTTTCTTTATGTAGTCATTCTTTATTATGTTCTTGTCATTATTTGTAAAGATCTACGGTTTGTTGATTGTGTTGCCGGTGTAACCTCGCATCGCGGGGTGGCCTCTCGAATCTCTCGTATGTTGTCTCCTGCTGAAAAAaa ]
[+] EMBL AU165168 [ TCCGTGGCTGCAGAGGCGCTGCGACCGTTTTAACATTTTGTTTGTAGGATAAGTTTGTAGCTTAGGTTTGGAGTAGGTAGCTAATTTTGTTGCGGTGGAAGTAGGTATTAATCCTACATTAAATCCCGTGTTTATTTTTTTAGGTCAATACTGACAAAAGTTCAGTAGCTAGATGTTTATTATTTGTTTCTTTATGTAGTCATTCTTTATTATGTTCTTGTCATTATTTGTAAAGATCTACGGTTTGTTGAaaaa ]
consensusID : consensus_10357#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 406 fasta sequence
[TGAAGGGTGCACCACACCTTGTGGATACCCCGACGCGTACCGCTTCCTGGGGACTTGTCCAGCTTCTGTTCTTGCTTGGGGGAACTTCAAATCCGTGGCTCCAGAGGCAGCTGCGACCGTTTTAACCTTTTGTTTGTAGGATAAGTTTGTAGCTTAGGTTTGGAGTAGGTAGCCCATTTTGTTCGGTGGAAGTAGGTATTAAGCCTACCATTAAATCCCGTATTTATTTTTTTAGGTCCATACTGCACCAAAGTTCCGTAGCTAGATGTTTATTATTTGTTTCTTTATGTAGTCCATTCTTTATTATGTTCTTGTCCTTATTTGTAAAGATCTACGGTTTGTTGATGGTGTTGCCGGTGTAACCTCGCATCGCGGGGTGGCCTCTCACATCTCTCCAAAAAAAAAA]
[+] EMBL BI809377 [TGAAGGGTGCACCACACCTTGTGGATACCCCGACGCGTACCGCTTCCTGGGGACTTGTCCAGCTTCTGTTCTTGCTTGGGGGAACTTCAAATCCGTGGCTCCAGAGGCAGCTGCGACCGTTTTAACCTTTTGTTTGTAGGATAAGTTTGTAGCTTAGGTTTGGAGTAGGTAGCCCATTTTGTTCGGTGGAAGTAGGTATTAAGCCTACCATTAAATCCCGTATTTATTTTTTTAGGTCCATACTGCACCAAAGTTCCGTAGCTAGATGTTTATTATTTGTTTCTTTATGTAGTCCATTCTTTATTATGTTCTTGTCCTTATTTGTAAAGATCTACGGTTTGTTGATGGTGTTGCCGGTGTAACCTCGCATCGCGGGGTGGCCTCTCACATCTCTCCAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10357#0 CCGATCAGACGCCTAGTTTAGGGTTTCAGAGCTTTCTCCCCACCTCTCCCCTCCCCTCCC 60
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 CCCCCTCTCTCTGTCGTCCTCTTCCTCCCGCTCGCGTCCGCCATTGACGCGGCGCGGCGC 120
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 ACGAGCTCCCCCTCAGATCTGACCAATCCACACCGCGAACCCTCTCACCTGACGCAACCC 180
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 CGAATCTTGCCTGGAACGGCGAAGAATTCGAACACAAATCTGAAGCACACCGTCGTCACT 240
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 AAGACCACACACTACATCTGATTTTTTTTTGTTTCTCCACACCCTGATTGTTTCTAGATT 300
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 TTTTTTTATTCTCGTTTCGGACGCTTCATAAGAACAGATCTGCGAGCGAGTTCGCGGATC 360
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 TTATCTATCTGTGTGAGAACCAAGACCCTTTTGTTGCCTGTGGACACGATCCGAACGAAC 420
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 TTTGACCTGAGGATTCGTTTGAGATCTGTTTGCTGCTGGTCTCGAGAGAATGATCAGGTC 480
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 GATGGTATATTTCGGGAACACCTCCATCGGCGAGGTGGAGGTGTGGCCCAGCGGCGACGC 540
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 GAGCCTGGCAGCGGCAGCGTGGGCTCGAGAGATCCGCGTTGACCGCCTTTCCCCGCCCAG 600
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 CGAGCGGTGCCAGCCGCTCGCCGTGATGCATACCGTGGCCGTCGGTGCTCGCTGCCTCGT 660
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 CATGGAGTCCAGGCTGCCCAAGGCAGCGGATGAGCCACCCCAGCCTCTCGTCGCCATGCA 720
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 CGCTGCTTGCCTCAAGGAAAACAAGACTGCAGTTGTTCCACTAGGAGAGGAAGAATTGCA 780
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 TTTAGTGGCAATGACATCCAGGAGAAACCTGACAAATCACGCATGTTTCTGGGGATATAA 840
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 AGTGCCATTTGGTTTGTACAATTCTTGCTTGACTATGTTAAATCTCCGGTGCCTTGGGAT 900
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 CGTATTTGACCTTGATGAGACACTGATTGTCGCCAATACTACACGGTCTTTTGAGGACAG 960
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 AATTGACGCGCTTCAGAGAAAGTTGAGCAATGAGACTGATCCACAGCGCATAAACGGTAT 1020
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 GATAGCGGAGATTAAGAGGTACCAAGATGATAAGTCTATCCTAAAGCAGTACATTGAAGG 1080
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 TGATCAGGTCTATGATGATGGAAAAATGTATAAAGTGCAACCTGAGTTGGTTCCGCCATT 1140
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 ATCCGATAACCATCAACCAATGACACGTCCAGTTATACGATTACAAGAGAAGAATATTAT 1200
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 CTTGACGAGAATAAATCCTTTGATAAGGGATACCAGTGTTCTTGTACGTTTAAGGCCAGC 1260
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 ATGGGAGGATCTCCGGAGCTACTTGATTGCTAGAGGTCGCAAACGTTTTGAGGTCTATGT 1320
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 GTGTACAATGGCTGAGAGAGACTACGCCTTAGAAATGTGGAGGTTGCTTGATCCAGACTC 1380
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 AAGATTGATTAACTCTGTTCAACTTAATGACAGAATGGTGTGTGTAAAATCTGGTTTAAG 1440
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 AAAGTCCTTGCTGAATGTTTTCCATGATGGATCCTGCCATCCTGGAATGGCCCTAGTAAT 1500
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 TGATGACCGACTCAAAGTCTGGGATGAGAAGGATCAATCTAGAGTTCATGTGGTTCCTGC 1560
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 ATTCACTCCATATTATGCACCACAAGCAGAGGCAAACTGTTCTATCCCAGTTCTCTGTGT 1620
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 CGCCAGGAATGTTGCATGCAATGTTAGAGGGGGCTTCTTTAAGGACTTTGATGAAGGCCT 1680
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 CTTACCAAGAATTAGCAATGTTTTTTATGAGGATGAAATCAATGAAATCCCATCTGCTCC 1740
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 AGATGTTGGCAATTATTTGATTTCAGAGGATGAGAATGTTGCGGCAGTGAATGGAAACAG 1800
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 GGATCCATTGGCTTTTGATGGTATGGCTGATGCTGAGGTTGAAAGGAGAATGAAGGAAGC 1860
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 ATCTGGAAATGCTCAAGCTTTTACTACAACAGCAGCTAACTTTGTGATGCCAGTACTCCC 1920
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 TGGTCAAAATTTCGTTTCATCTTCAGTAGCACCAGTAGCCCCATCCCTTGGCATGGTGCC 1980
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 TTTGAGTAATAATCAGGGTCCACCTCCATTCACTCAACCAGTTGCTCAACTGAGTCTCTC 2040
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 AGATCCACTGCAAGGCTCTCCAGCTAGGGAAGAGGGTGAAGTTCCTGAGTCAGAGTTAGA 2100
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 TCCTGACACAAGGAGAAGACTTCTTATATTACAACATGGTCAAGACACCAGAGATCCTAC 2160
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 ACCTCCTCTTCCAGCAGTACCTCCTGTTCAAGTCCCAGTTCCTCCAGTTCAACCTCATGG 2220
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 AAATTGGTTTCCTGTAGAGGATGGCATGAATCCAAATAATCTAAACAGGGGTTCTGCAGG 2280
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 GTTCCCTTTGGAATCTGAAACTATGCACTATGATAAAAAGCAACTACCTCACCCATTCTT 2340
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 TCATGGTGGGGAAAACCCTATATCCTCTGATAGATTTAGTTATCAGAACCAGAGGTATCC 2400
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 CTCCCAGCTACCGCATAGTGAAGATCATCGCGTTCTTCAGAACCATGCACCGTCAAGATA 2460
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 CAGATCCTTCCCTGGAGAGGAGCTAGCAACTCGGCATGTTTCTTCAAGTCAGAGAAACAA 2520
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 CCAGATAGTACCAGGACAACACTTTGCTCGGCATGCAGGGAGCTCTGCTGGCATACTAGA 2580
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 GGAGATTGCTATGAAGTGTGGTTCTAAGGTGGAGTACAGGTCAGCACTATGTGATACTGC 2640
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 GGATTTACAGTTCTCAATCGAGGTTTGGATTGTTGGAGAAAAAGTAGGCGAAGGCATTGG 2700
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 CAGGACAAGGAAAGAAGCACAGTGTCAAGCTGCAGAAATCTCATTAAGAAATTTAGCTAA 2760
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 TAAATATCTGTCATCTGATCCAAATAAGATGACTGATATGAAAGAAAATGGTTTTGGTAG 2820
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 CAATACAAACATTTTTGGATACCCTGGAAATAGTAGGGACGATGTGTTACCAATTGCAAG 2880
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 TACTTCAGAAGAAACTCGCTTTGTGAAGATGGGGGAGAACAATTCCAGAAAAGCAGGAGG 2940
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 TTCTATTGCTGCTCTCAAGGAACTTTGCACAGCTGAGGGATATAACTTAGTTTTTCAAGC 3000
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 TCGGACATCTCCTGATAGTTCAGTAGGCAAAGAAGCTTATGCTGAGGTAGAAGTTTGTGG 3060
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 GCAAATTCTAGGCAACGGAGTGGGAATAACATGGGAAGATGCTAAGCTTCAGGCTGCTGA 3120
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 TGAAGCTCTTGGAATGTTGAGATCCATGCTTGGTCCACTTGCTCAGAAACGGTCCAGTTC 3180
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 TCCAAGGTCACTGGCACCCAGTTTTGATAAGCGCTTCAAGCCAGATTTTCCACGGGCAGT 3240
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 GCAAAGGGTTCCTTATGGTAGATATTCCCGAATTGAAGGCCATGTTCCTTGACATTTTAA 3300
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 CGGATACATTGGTTCTAAACTCTGGATTTTTTAGCTAGATGAGACGTATCAACTTTGCAG 3360
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 AGAATAAAAACCATGACACCCGGTCATCTTGCGCGGCTTCTACTGGAAACATGGATGGTT 3420
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 GTGGATGCACCAAGAAATTGCAAGCAATTGTGGTGGCCATGTCTTCATGCTGATACTTGC 3480
consensus_10357#1 ------------------------------------------------------------
consensus_10357#0 TTTGGGTCTGATCTCACGTTAATTGACATGTTTGACTTGAAGTGTGC-CCAT-CCTTGTG 3538
consensus_10357#1 -------------------------------------TGAAGGGTGCACCACACCTTGTG 23
***** **** *** *******
consensus_10357#0 GATACCCAGACG--TACCGCTTCCGTGGGGGCTTGTGCAGCTTCTGTCCT-GCTTGGGGG 3595
consensus_10357#1 GATACCCCGACGCGTACCGCTTCC-TGGGGACTTGTCCAGCTTCTGTTCTTGCTTGGGGG 82
******* **** ********** ***** ***** ********** ** *********
consensus_10357#0 AACTTCAA-TCCGTGGCTGCAGAGGC-GCTGCGACCGTTTTAACATTTTGTTTGTAGGAT 3653
consensus_10357#1 AACTTCAAATCCGTGGCTCCAGAGGCAGCTGCGACCGTTTTAACCTTTTGTTTGTAGGAT 142
******** ********* ******* ***************** ***************
consensus_10357#0 AAGTTTGTAGCTTAGGTTTGGAGTAGGTAGCTAATTTTGTTGCGGTGGAAGTAGGTATTA 3713
consensus_10357#1 AAGTTTGTAGCTTAGGTTTGGAGTAGGTAGCCCATTTTGTT-CGGTGGAAGTAGGTATTA 201
******************************* ******** ******************
consensus_10357#0 ATCCTAC-ATTAAATCCCGTGTTTATTTTTTTAGGTCAATACTG-ACAAAAGTTCAGTAG 3771
consensus_10357#1 AGCCTACCATTAAATCCCGTATTTATTTTTTTAGGTCCATACTGCACCAAAGTTCCGTAG 261
* ***** ************ **************** ****** ** ******* ****
consensus_10357#0 CTAGATGTTTATTATTTGTTTCTTTATGTAGTC-ATTCTTTATTATGTTCTTGTCATTAT 3830
consensus_10357#1 CTAGATGTTTATTATTTGTTTCTTTATGTAGTCCATTCTTTATTATGTTCTTGTCCTTAT 321
********************************* ********************* ****
consensus_10357#0 TTGTAAAGATCTACGGTTTGTTGATTGTGTTGCCGGTGTAACCTCGCATCGCGGGGTGGC 3890
consensus_10357#1 TTGTAAAGATCTACGGTTTGTTGATGGTGTTGCCGGTGTAACCTCGCATCGCGGGGTGGC 381
************************* **********************************
consensus_10357#0 CTCTCGAATCTCTCGTATGTTGTCTCCTGCTGAAAAACTGTACACGTCTGCTGTGGTCGT 3950
consensus_10357#1 CTCTCACATCTCTCCAAAAAAAAAA----------------------------------- 406
***** ******* *
consensus_10357#0 GACTACG 3957
consensus_10357#1 -------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||