These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10366#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2516 fasta sequence [TCTCTCTCTCATTCTTGTGTTTCTTCTCGATCGATCTCTCGATTTCTCTCTGTGCACCAGCATCAGCTATGGTGTCCGACGCCAGCAAGAAGAAGGCGGCGCAGAAGAAGGCCGCCGCCGC-TGCCAAGAGGGGTGACAAGGCCAAGGCCGCCATTACTCTCTCCGAGCGCACCTGCACCGCCGTCCTCACCTCCCATCCCCTCTCCCGCGACATCCACATCGAGTCCCTCTCCCTCACATTCCACGGCCATGACCTGCTTCTTGACACCGACCTGGAGCTCAACTACGGCAGGCGATATGGTTTGCTTGGCTTAAA-CGGCTGTGGAAAGTCCTGTCTCCTCAAAGCTATAGGATGCCGGGAGCTTCCTATCCCTCCACACATGGACATCTATCATCTCACCCATGAGATCGAGGCTTCCGACATGTCTGCGCTACAAGCTGTCATCAGCTGTGACGAACAGAGACTCCAGCTCGAGAAGGAGGCTGAAATCTTGGCCGCTCAAGATGACGGTGGCGGCGAAGCCCTGGACCGCGTTTATGAACGCTTAGAAGCCATCGACGCATCCACCGCTGAAAAGCGTGCTGCAGAGATTTTGTTTGGCTTGGGTTTTAACAAGCACATGCAGGCAAAGAAAACCTGTGATTTCTCTGGCGGTTGGCGCATGAGGATCGCTTTGGCTAGGGCGCTCTTCATGAATCCAACTATCCTTTTGCTTGATGAGCCCACCAATCATCTAGATCTTGAGGCCTGTGTCTGGCTGGAGGAAACCTTGAAGAAATTTGACCGTATACTTGTCGTCATATCACACTCCCAGGACTTCCTAAATGGAGTATGTACAAATATCATCCACATGCAAAACAGGAAGCTCAAGCTATACACTGGCAACTATGACCAGTATGTCCAAACACGAGCCGAGCTTGAAGAAAATCAAATGAAACAATACAGATGGGAGCAGGACCAGATTGCCTCGATGAAGGAGTACATTGCACGGTTTGGTCACGGATCTGCCAAGCTGGCCCGACAGGCTCAAAGTAAAGAGAAAACTCTTGCTAAGATGGAGCGTGGTGGGCTCACGGAGAAGGTTGTAAGGGATAAGGTATTGACGTTCCGCTTCACTGATGTTGGCACGCTACCACCTCCAGTGCTGCAGTTTGTGGAGGTCACATTTGGGTACACACCAGACAACCTGATCTACAAGAACCTAGATTTTGGTGTTGACCTTGACTCAAGGGTGGCGCTGGTTGGTCCTAATGGGGCTGGGAAGAGTACGCTCCTTAAACTCATGACAGGTGATCTCATACCGCTGGACGGCATGGTGAGGCGACACAACCATCTCAGGATCGCACAATTCCACCAGCACCTTGCAGAGAAGCTGGACCTGGACATGTCAGCTCTGCAGTACATGATGAAGGAATACCCAGGGAACGAGGAGGAGAGGATGAGGGCAGCCATCGGCAAGTTTGGGTTGTCAGGGAAGGCACAGGTAATGCCAATGAGGAACCTGTCGGACGGGCAGAGGAGCAGAGTGATATTTGCATGGTTGGCGTGGAGGGAGCCACACATGCTGCTGCTGGATGAGCCAACGAACCATCTGGACATTGAAACAATCGACTCTCTTGCAGAGGCGCTGAATGAATGGGATGGAGGGCTTGTGCTGGTGAGCCATGACTTCAGGCTGATCAACCAAGTGGCGCAGGAGGTATGGGTGTGCGAAAAGCAGGCGGTGACCAGGTGGGAAGGTGACATCATGGAGTTCAAGGAGCACCTGAGGAGCAAGGCCGGAGTGGACGATTGAGTTGAGTTGAGTTGAGTAGTTTTGATCTTGCTGCCTGGCCCGGAGAGGAGATACCATCACTCTGCTAGTTACTAGTATTTCTTCGGCTGTTACTAAACTATACTGCCCAGCCTAACGGGGACGACGACTGCATCATCATCTCTTGATCTCTCTCTCTTAGTTAAGTTGGATGCTTGTCACGGATGTTTGTACCTGATCTCCATCAACTACATCTGATGCTATAGCCCATATGATGTACCGTCCTCTTCTTGGGGTCTCTGGAGAATGAGGAAACAGCAAGATCCAGCCAGCATAGCATGTATGTATAGTGTAATTAGCTGGTTTGTTGGCGGTGCACATGCATAAGATATACTTCCTCCGTTTCATATTATAATACTATCTATTATTGCCCACATTCATATATATGTCTAGATTCATTAGCATCTATATGAATGTGGGCAAT-GATAGAAAGTCTTATAATATGAAACGGAGGGAGTA-TTATCTTGGTTTGCACTTGCATGATCACCTGCTGTAGTTATTATTATCAGTGACCAAGTTCCCCTAGCTAGCAGTAGCACTCCATGAAAAGATATCTACATGAAACTGTACCACCCCCACGATATTATATATGAGATTGGATTTTAAACTCTTGAGGGGATGTCTCATCGTTGCTTGTATGTTNAATTGAGAAGATGTATTANCATGTGATATATCTTATTATAAGCATTCAACTTAAAATTT] [+] EMBL C28510 [TCTCTCTCTCATTCTTGTGTTTCTTCTCGATCGATCTCTCGATTTCTCTCTGTGCACCAGCATCAGCTATGGNGTCCGACGCCAGCAAGAAGAAGGCGGCGCAGAAGAAGGCCGCCGCCGC TGCCAAGAGGGGTGACAAGGCCAAGGCCGCCATTACTCTCTCCGAGCGCACCTGCACCGCCGTCCTCACCTCCCATCCCCTCTCCCGCGACATCCACATCGAGTCCCTCTCCCTCACATTCCACGGCCATGACCTGCTTCTTGACAACGACCTGGAGCTCAACTACGGCAGGCGATATGGTTTTCTTGGCTTAAANGGGCTGTGGAAAGTCCTGTCTCCTCAAAGCTATAGGATGCCGGGGNTTTCCT ] [+] EMBL AK069041 [ CTCTCATTCTTGTGTTTCTTCTCGATCGATCTCTCGATTTCTCTCTGTGCACCAGCATCAGCTATGGTGTCCGACGCCAGCAAGAAGAAGGCGGCGCAGAAGAAGGCCGCCGCCGC TGCCAAGAGGGGTGACAAGGCCAAGGCCGCCATTACTCTCTCCGAGCGCACCTGCACCGCCGTCCTCACCTCCCATCCCCTCTCCCGCGACATCCACATCGAGTCCCTCTCCCTCACATTCCACGGCCATGACCTGCTTCTTGACACCGACCTGGAGCTCAACTACGGCAGGCGATATGGTTTGCTTGGCTTAAA CGGCTGTGGAAAGTCCTGTCTCCTCAAAGCTATAGGATGCCGGGAGCTTCCTATCCCTCCACACATGGACATCTATCATCTCACCCATGAGATCGAGGCTTCCGACATGTCTGCGCTACAAGCTGTCATCAGCTGTGACGAACAGAGACTCCAGCTCGAGAAGGAGGCTGAAATCTTGGCCGCTCAAGATGACGGTGGCGGCGAAGCCCTGGACCGCGTTTATGAACGCTTAGAAGCCATCGACGCATCCACCGCTGAAAAGCGTGCTGCAGAGATTTTGTTTGGCTTGGGTTTTAACAAGCACATGCAGGCAAAGAAAACCTGTGATTTCTCTGGCGGTTGGCGCATGAGGATCGCTTTGGCTAGGGCGCTCTTCATGAATCCAACTATCCTTTTGCTTGATGAGCCCACCAATCATCTAGATCTTGAGGCCTGTGTCTGGCTGGAGGAAACCTTGAAGAAATTTGACCGTATACTTGTCGTCATATCACACTCCCAGGACTTCCTAAATGGAGTATGTACAAATATCATCCACATGCAAAACAGGAAGCTCAAGCTATACACTGGCAACTATGACCAGTATGTCCAAACACGAGCCGAGCTTGAAGAAAATCAAATGAAACAATACAGATGGGAGCAGGACCAGATTGCCTCGATGAAGGAGTACATTGCACGGTTTGGTCACGGATCTGCCAAGCTGGCCCGACAGGCTCAAAGTAAAGAGAAAACTCTTGCTAAGATGGAGCGTGGTGGGCTCACGGAGAAGGTTGTAAGGGATAAGGTATTGACGTTCCGCTTCACTGATGTTGGCACGCTACCACCTCCAGTGCTGCAGTTTGTGGAGGTCACATTTGGGTACACACCAGACAACCTGATCTACAAGAACCTAGATTTTGGTGTTGACCTTGACTCAAGGGTGGCGCTGGTTGGTCCTAATGGGGCTGGGAAGAGTACGCTCCTTAAACTCATGACAGGTGATCTCATACCGCTGGACGGCATGGTGAGGCGACACAACCATCTCAGGATCGCACAATTCCACCAGCACCTTGCAGAGAAGCTGGACCTGGACATGTCAGCTCTGCAGTACATGATGAAGGAATACCCAGGGAACGAGGAGGAGAGGATGAGGGCAGCCATCGGCAAGTTTGGGTTGTCAGGGAAGGCACAGGTAATGCCAATGAGGAACCTGTCGGACGGGCAGAGGAGCAGAGTGATATTTGCATGGTTGGCGTGGAGGGAGCCACACATGCTGCTGCTGGATGAGCCAACGAACCATCTGGACATTGAAACAATCGACTCTCTTGCAGAGGCGCTGAATGAATGGGATGGAGGGCTTGTGCTGGTGAGCCATGACTTCAGGCTGATCAACCAAGTGGCGCAGGAGGTATGGGTGTGCGAAAAGCAGGCGGTGACCAGGTGGGAAGGTGACATCATGGAGTTCAAGGAGCACCTGAGGAGCAAGGCCGGAGTGGACGATTGAGTTGAGTTGAGTTGAGTAGTTTTGATCTTGCTGCCTGGCCCGGAGAGGAGATACCATCACTCTGCTAGTTACTAGTATTTCTTCGGCTGTTACTAAACTATACTGCCCAGCCTAACGGGGACGACGACTGCATCATCATCTCTTGATCTCTCTCTCTTAGTTAAGTTGGATGCTTGTCACGGATGTTTGTACCTGATCTCCATCAACTACATCTGATGCTATAGCCCATATGATGTACCGTCCTCTTCTTGGGGTCTCTGGAGAATGAGGAAACAGCAAGATCCAGCCAGCATAGCATGTATGTATAGTGTAATTAGCTGGTTTGTTGGCGGTGCACATGCATAAGATATACTTCCTCCGTTTCATATTATAATACTATCTATTATTGCCCACATTCATATATATGTCTAGATTCATTAGCATCTATATGAATGTGGGCAAT GATAGAAAGTCTTATAATATGAAACGGAGGGAGTA TTATCTTGGTTTGCACTTGCATGATCACCTGCTGTAGTTATTATTATCAGTGACCAAGTTCCCCTAGCTAGCAGTAGCACTCCATGAAAAGATATCTACATGAAACTGTACCACCCCCACGATATTATATATGAGATTGG ] [+] EMBL OSS14270A [ TCTCTGTGCACCAGCATCAGCTATGGTGTCCGACGCCAGCAAGAAGAAGGCGGCGCAGAAGAAGGCCGCCGCCGCTTGCCAAGAGGGGTGACAAGGCCAAGG CGCCATTACTCTCTCCGAGCGCACCTGCACCGCCGTCCTCACCTCCCATCCCCTCTCCCGCGACATCCACATCGAGTCCCTCTCCCTCACATTCCACGGCCATGACCTGCTTCTTGACACCGACCTGGAGCTCAACTACGGCAGGCGATATGGTTTGCTTGGCTTAAA CGGCTGTGGAAAGTCCTGTCTNCTCAAAGCTATAGGATGCCGGGAGCTTCCTATCCCTTCACACATGGACATCTATCATGTAACCCATGAGATCGAGGCTT ] [+] EMBL AU032808 [ GAATGTGGGCAATNGATAGAAAGTCTTATAATATGAAACGGAGGGAGTANCTATCTTGGTTTGCACTTGCATGATCACCTGCTGTAGTTATTATTATCAGTGACCAAGTTCCCCTAGCTAGCAGTAGCACTCCATGAANAGATATCTACATGAAACTGTACCACCCCCACGATATTATATATGAGATTGGATTTTAAACTCTTGAGGGGATGTCTCATCGTTGCTTGTATGTTNAATTGAGAAGATGTATTANCATGTGATATATCTTATTATAAGCATTCAACTTAAAATTT] consensusID : consensus_10366#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 852 fasta sequence [CTTCAGGCTGATCAACCAAGTGGCGCAGGAGATATGGGTGTGCGAAAAGCAGGCGGTGACCAGGTGGGAAGGTGACATCATGGAGTTCAAGGAGCACCTGAGGAGCAAGGCCGGAGTGGACGATTGAGTTGAGTTGAGTTGAGTAGTTTTGATCTTGCTGCCTGGCCCGGAGAGGAGATACCATCACTCTGCTAGTTACTAGTATTTCTTCGGCTGTTACTAAACTATACTGCCCAGCCTAACGGGGACGACGACTGCATCATCATCTCTTGATCTCTCTCTCTTAGTTAAGTTGGATGCTTGTCACGGATGTTTGTACCTGATCTCCATCAACTACATCTGATGCTATAGCCCATATGGTACCACTACTGTGTTTATTATCTATATTCGTCTTGTTGCAAGCTTGGTAGTAACTATATATACTTGACGCTCTTGCTGCTCTTCCATTTGCAGCAGATGTACCGTCCTCTTCTTGGGGTCTCTGGAGAATGAGGAAACAGCAAGAGCCAGCCAGCATAGCATGTATGTATGTATAGTGTAATTAGCTGGTTTGTTGGCGGTGCACATGCATAAGATATACTTCCTCCGTTTTATATTATAAGACTATCTAGTATTGCCCACATTCATATATATATATATGTCTAGATTCATTAGCATCTATATGAATGTGGGCAATGATAGAAAGTCTTATAATATGAAACGGAGGGAGTATTATCTTGGTTTGCACTTGCATGATCACCTGCTGTAGTTATTATTATCAGTGACCAAGTTCCCCTAGCTAGCAGTAGCACTCCATGAAAAGATATCTACATGGAGCTGTACCACCCCCACGATATTATATATGAGATTAAA] [-] EMBL CB629670 [CTTCAGGCTGATCAACCAAGTGGCGCAGGAGATATGGGTGTGCGAAAAGCAGGCGGTGACCAGGTGGGAAGGTGACATCATGGAGTTCAAGGAGCACCTGAGGAGCAAGGCCGGAGTGGACGATTGAGTTGAGTTGAGTTGAGTAGTTTTGATCTTGCTGCCTGGCCCGGAGAGGAGATACCATCACTCTGCTAGTTACTAGTATTTCTTCGGCTGTTACTAAACTATACTGCCCAGCCTAACGGGGACGACGACTGCATCATCATCTCTTGATCTCTCTCTCTTAGTTAAGTTGGATGCTTGTCACGGATGTTTGTACCTGATCTCCATCAACTACATCTGATGCTATAGCCCATATGGTACCACTACTGTGTTTATTATCTATATTCGTCTTGTTGCAAGCTTGGTAGTAACTATATATACTTGACGCTCTTGCTGCTCTTCCATTTGCAGCAGATGTACCGTCCTCTTCTTGGGGTCTCTGGAGAATGAGGAAACAGCAAGAGCCAGCCAGCATAGCATGTATGTATGTATAGTGTAATTAGCTGGTTTGTTGGCGGTGCACATGCATAAGATATACTTCCTCCGTTTTATATTATAAGACTATCTAGTATTGCCCACATTCATATATATATATATGTCTAGATTCATTAGCATCTATATGAATGTGGGCAATGATAGAAAGTCTTATAATATGAAACGGAGGGAGTATTATCTTGGTTTGCACTTGCATGATCACCTGCTGTAGTTATTATTATCAGTGACCAAGTTCCCCTAGCTAGCAGTAGCACTCCATGAAAAGATATCTACATGGAGCTGTACCACCCCCACGATATTATATATGAGATTAAA] consensusID : consensus_10366#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 769 fasta sequence [TCTCTCTGATTTCTCTCTGTGCACCAGCATCAGCTATGGTGTCCGACGCCAGCAAGAAGAAGGCGGCGCAGAAGAAGGCCGCCGCCGCTGCCAAGAGGGGTGACAAGGCCAAGGCCGCCATTACTCTCTCCGAGCGCACCTGCACCGCCGTCCTCACCTCCCATCCCCTCTCCCGCGACATCCACATCGAGTCCCTCTCCCTCACATTCCACGGCCATGACCTGCTTCTTGACACCGACCTGGAGCTCAACTACGGCAGGTAATCTTTATTATTTTTTTCATCAATCAATCAATCCATCATCTGTAAGTAAGTACTAGTACTATAGAGACCATTCATCTCGTCTCTTAGGCGATATGGTTTGCTTGGCTTAAACGGCTGTGGAAAGTCCTGTCTCCTCAAAGCTATAGGATGCCGGGAGCTTCCTATCCCTCCACACATGGACATCTATCATCTCACCCATGAGATCGAGGCTTCCGACATGTCTGCGCTACAAGCTGTCATCAGCTGTGACGAACAGAGACTCCAGCTCGAGAAGGAGGCTGAAATCTTGGCCGCTCAAGATGACGGTGGCGGCGAAGCCCTGGACCGCGTTTATGAACGCTTAGAAGCCATCGACGCATCCACCGCTGAAAAGCGTGCTGCAGAGATTTTGTTTGGCTTGGGTTTTAACAAGCACATGCAGGCAAAGAAAACCCGTGATTTCTCTGGCGGTTGGCGCATGANGATCGCTTTGGCTAGGGCGCTCTTCATGAATCCAACTATCCTTTT] [+] EMBL CB629669 [TCTCTCTGATTTCTCTCTGTGCACCAGCATCAGCTATGGTGTCCGACGCCAGCAAGAAGAAGGCGGCGCAGAAGAAGGCCGCCGCCGCTGCCAAGAGGGGTGACAAGGCCAAGGCCGCCATTACTCTCTCCGAGCGCACCTGCACCGCCGTCCTCACCTCCCATCCCCTCTCCCGCGACATCCACATCGAGTCCCTCTCCCTCACATTCCACGGCCATGACCTGCTTCTTGACACCGACCTGGAGCTCAACTACGGCAGGTAATCTTTATTATTTTTTTCATCAATCAATCAATCCATCATCTGTAAGTAAGTACTAGTACTATAGAGACCATTCATCTCGTCTCTTAGGCGATATGGTTTGCTTGGCTTAAACGGCTGTGGAAAGTCCTGTCTCCTCAAAGCTATAGGATGCCGGGAGCTTCCTATCCCTCCACACATGGACATCTATCATCTCACCCATGAGATCGAGGCTTCCGACATGTCTGCGCTACAAGCTGTCATCAGCTGTGACGAACAGAGACTCCAGCTCGAGAAGGAGGCTGAAATCTTGGCCGCTCAAGATGACGGTGGCGGCGAAGCCCTGGACCGCGTTTATGAACGCTTAGAAGCCATCGACGCATCCACCGCTGAAAAGCGTGCTGCAGAGATTTTGTTTGGCTTGGGTTTTAACAAGCACATGCAGGCAAAGAAAACCCGTGATTTCTCTGGCGGTTGGCGCATGANGATCGCTTTGGCTAGGGCGCTCTTCATGAATCCAACTATCCTTTT] consensusID : consensus_10366#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 608 fasta sequence [CGAGGCAACGGGGACGACGACTGCATCATCATCTCTTGATCTCTCTCTCTTAGGTAAGTTGGATGCTTGTCACGGATGTTTGTACCTGATCTCCATCTACTACATCTGATGCTATAGCCCATATGCAGATGTACCGTCCTCTTCTTGGGGCCTCTGGAGAATGAGGAAACAGCAAGAGCCAGCCAGCATAGCATGTATGTATGTATAGTGTAATTAGCTGGTTTGTTGGCGGTGCACATGCATAAGATATACTTCCTCCGTTTTATATTATAAGACTATCTAGTATTGCCCCCATTCATATATATATATATGTCTAGATTCATTAGCATCTATATGAATGTGGGCAATGATAGAAAGTCTTATAATATGAAACGGAGGGAGTATTATCTTGGTTTGCCCTTGCATGATCCCCTGCCGTAGTTATTATTATCAGTGACCAAGTTCCCCTAGCTAGCAGTAGCCCTCCATGAAAAGATATTTACATGAAACTGTACCCCCCCCCCGATATTATATATGAGATTGGATTTTAAACTCTCGAGGGGATGTCTCATCGTTGCTTGTATGTTAAATTGAGAAGATGTATTAACATGTGAAAAAAAAAAAAAAAA] [-] EMBL CA762782 [CGAGGCAACGGGGACGACGACTGCATCATCATCTCTTGATCTCTCTCTCTTAGGTAAGTTGGATGCTTGTCACGGATGTTTGTACCTGATCTCCATCTACTACATCTGATGCTATAGCCCATATGCAGATGTACCGTCCTCTTCTTGGGGCCTCTGGAGAATGAGGAAACAGCAAGAGCCAGCCAGCATAGCATGTATGTATGTATAGTGTAATTAGCTGGTTTGTTGGCGGTGCACATGCATAAGATATACTTCCTCCGTTTTATATTATAAGACTATCTAGTATTGCCCCCATTCATATATATATATATGTCTAGATTCATTAGCATCTATATGAATGTGGGCAATGATAGAAAGTCTTATAATATGAAACGGAGGGAGTATTATCTTGGTTTGCCCTTGCATGATCCCCTGCCGTAGTTATTATTATCAGTGACCAAGTTCCCCTAGCTAGCAGTAGCCCTCCATGAAAAGATATTTACATGAAACTGTACCCCCCCCCCGATATTATATATGAGATTGGATTTTAAACTCTCGAGGGGATGTCTCATCGTTGCTTGTATGTTAAATTGAGAAGATGTATTAACATGTGAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10366#1 ------------------------------------------------------------ consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 TCTCTCTCTCATTCTTGTGTTTCTTCTCGATCGATCTCTCGATTTCTCTCTGTGCACCAG 60 consensus_10366#2 ------------------------------------------------------------ consensus_10366#1 ------------------------------------------------------------ consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 CATCAGCTATGGTGTCCGACGCCAGCAAGAAGAAGGCGGCGCAGAAGAAGGCCGCCGCCG 120 consensus_10366#2 ------------------------------------------------------------ consensus_10366#1 ------------------------------------------------------------ consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 CTGCCAAGAGGGGTGACAAGGCCAAGGCCGCCATTACTCTCTCCGAGCGCACCTGCACCG 180 consensus_10366#2 ------------------------------------------------------------ consensus_10366#1 ------------------------------------------------------------ consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 CCGTCCTCACCTCCCATCCCCTCTCCCGCGACATCCACATCGAGTCCCTCTCCCTCACAT 240 consensus_10366#2 ------------------------------------------------------------ consensus_10366#1 ------------------------------------------------------------ consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 TCCACGGCCATGACCTGCTTCTTGACACCGACCTGGAGCTCAACTACGGCAGGCGATATG 300 consensus_10366#2 ------------------------------------------------------------ consensus_10366#1 ------------------------------------------------------------ consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 GTTTGCTTGGCTTAAACGGCTGTGGAAAGTCCTGTCTCCTCAAAGCTATAGGATGCCGGG 360 consensus_10366#2 ------------------------------------------------------------ consensus_10366#1 ------------------------------------------------------------ consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 AGCTTCCTATCCCTCCACACATGGACATCTATCATCTCACCCATGAGATCGAGGCTTCCG 420 consensus_10366#2 ------------------------------------------------------------ consensus_10366#1 ------------------------------------------------------------ consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 ACATGTCTGCGCTACAAGCTGTCATCAGCTGTGACGAACAGAGACTCCAGCTCGAGAAGG 480 consensus_10366#2 ------------------------------------------------------------ consensus_10366#1 ------------------------------------------------------------ consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 AGGCTGAAATCTTGGCCGCTCAAGATGACGGTGGCGGCGAAGCCCTGGACCGCGTTTATG 540 consensus_10366#2 ------------------------------------------------------------ consensus_10366#1 ------------------------------------------------------------ consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 AACGCTTAGAAGCCATCGACGCATCCACCGCTGAAAAGCGTGCTGCAGAGATTTTGTTTG 600 consensus_10366#2 ------------------------------------------------------------ consensus_10366#1 ------------------------------------------------------------ consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 GCTTGGGTTTTAACAAGCACATGCAGGCAAAGAAAACCTGTGATTTCTCTGGCGGTTGGC 660 consensus_10366#2 ------------------------------------------------------------ consensus_10366#1 ------------------------------------------------------------ consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 GCATGAGGATCGCTTTGGCTAGGGCGCTCTTCATGAATCCAACTATCCTTTTGCTTGATG 720 consensus_10366#2 ------------------------------------------------------------ consensus_10366#1 ------------------------------------------------------------ consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 AGCCCACCAATCATCTAGATCTTGAGGCCTGTGTCTGGCTGGAGGAAACCTTGAAGAAAT 780 consensus_10366#2 ------------------------------------------------------------ consensus_10366#1 ------------------------------------------------------------ consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 TTGACCGTATACTTGTCGTCATATCACACTCCCAGGACTTCCTAAATGGAGTATGTACAA 840 consensus_10366#2 ------------------------------------------------------------ consensus_10366#1 ------------------------------------------------------------ consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 ATATCATCCACATGCAAAACAGGAAGCTCAAGCTATACACTGGCAACTATGACCAGTATG 900 consensus_10366#2 ------------------------------------------------------------ consensus_10366#1 ------------------------------------------------------------ consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 TCCAAACACGAGCCGAGCTTGAAGAAAATCAAATGAAACAATACAGATGGGAGCAGGACC 960 consensus_10366#2 ------------------------------------------------------------ consensus_10366#1 ------------------------------------------------------------ consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 AGATTGCCTCGATGAAGGAGTACATTGCACGGTTTGGTCACGGATCTGCCAAGCTGGCCC 1020 consensus_10366#2 ------------------------------------------------------------ consensus_10366#1 ------------------------------------------------------------ consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 GACAGGCTCAAAGTAAAGAGAAAACTCTTGCTAAGATGGAGCGTGGTGGGCTCACGGAGA 1080 consensus_10366#2 ------------------------------------------------------------ consensus_10366#1 ------------------------------------------------------------ consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 AGGTTGTAAGGGATAAGGTATTGACGTTCCGCTTCACTGATGTTGGCACGCTACCACCTC 1140 consensus_10366#2 ------------------------------------------------------------ consensus_10366#1 ------------------------------------------------------------ consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 CAGTGCTGCAGTTTGTGGAGGTCACATTTGGGTACACACCAGACAACCTGATCTACAAGA 1200 consensus_10366#2 ------------------------------------------------------------ consensus_10366#1 ------------------------------------------------------------ consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 ACCTAGATTTTGGTGTTGACCTTGACTCAAGGGTGGCGCTGGTTGGTCCTAATGGGGCTG 1260 consensus_10366#2 ------------------------------------------------------------ consensus_10366#1 ------------------------------------------------------------ consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 GGAAGAGTACGCTCCTTAAACTCATGACAGGTGATCTCATACCGCTGGACGGCATGGTGA 1320 consensus_10366#2 ------------------------------------------------------------ consensus_10366#1 ------------------------------------------------------------ consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 GGCGACACAACCATCTCAGGATCGCACAATTCCACCAGCACCTTGCAGAGAAGCTGGACC 1380 consensus_10366#2 ------------------------------------------------------------ consensus_10366#1 ------------------------------------------------------------ consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 TGGACATGTCAGCTCTGCAGTACATGATGAAGGAATACCCAGGGAACGAGGAGGAGAGGA 1440 consensus_10366#2 ------------------------------------------------------------ consensus_10366#1 ------------------------------------------------------------ consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 TGAGGGCAGCCATCGGCAAGTTTGGGTTGTCAGGGAAGGCACAGGTAATGCCAATGAGGA 1500 consensus_10366#2 ------------------------------------------------------------ consensus_10366#1 ------------------------------------------------------------ consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 ACCTGTCGGACGGGCAGAGGAGCAGAGTGATATTTGCATGGTTGGCGTGGAGGGAGCCAC 1560 consensus_10366#2 ------------------------------------------------------------ consensus_10366#1 ------------------------------------------------------------ consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 ACATGCTGCTGCTGGATGAGCCAACGAACCATCTGGACATTGAAACAATCGACTCTCTTG 1620 consensus_10366#2 ------------------------------------------------------------ consensus_10366#1 -------------------------------------------------CTTCAGGCTGA 11 consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 CAGAGGCGCTGAATGAATGGGATGGAGGGCTTGTGCTGGTGAGCCATGACTTCAGGCTGA 1680 consensus_10366#2 ---------------------------------------------TCTCTCTGATTTCTC 15 consensus_10366#1 TCAACCAAGTGGCGCAGGAGATATGGGTGTGCGAAAAGCAGGCGGTGACCAGGTGGGAAG 71 consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 TCAACCAAGTGGCGCAGGAGGTATGGGTGTGCGAAAAGCAGGCGGTGACCAGGTGGGAAG 1740 consensus_10366#2 TCTGTGCACCAGCATCAGCTATGGTGTCCGACGCCAGCAAGAAGAAGGCGGCGCAGAAGA 75 consensus_10366#1 GTGACATCATGGAGTTCAAGGAGCACCTGAGGAGCAAGGCCGGAGTGGACGATTGAGTTG 131 consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 GTGACATCATGGAGTTCAAGGAGCACCTGAGGAGCAAGGCCGGAGTGGACGATTGAGTTG 1800 consensus_10366#2 AGGCCGCCGCCGCTGCCAAGAGGGGTGACAAGGCCAAGGCCGCCATTACTCTCTCCGAGC 135 consensus_10366#1 AGTTGAGTTGAGTAGTTTTGATCTTGCTGCCTGGCCCGGAGAGGAGATACCATCACTCTG 191 consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 AGTTGAGTTGAGTAGTTTTGATCTTGCTGCCTGGCCCGGAGAGGAGATACCATCACTCTG 1860 consensus_10366#2 GCACCTGCACCGCCGTCCTCACCTCCCATCCCCTCTCCCGCGACATCCACATCGAGTC-- 193 consensus_10366#1 CTAGTTACTAGTATTTCTTCGGCTGTTACTAAACTATACTGCCCAGCCTAACGGGGACGA 251 consensus_10366#3 -------------------------------------------CGAGGCAACGGGGACGA 17 consensus_10366#0 CTAGTTACTAGTATTTCTTCGGCTGTTACTAAACTATACTGCCCAGCCTAACGGGGACGA 1920 consensus_10366#2 CCTCTCCCTCACATT-CCACGGCCATGACCTGCTTCTTGACACCGACCTG--GAGCTCAA 250 * * * * * consensus_10366#1 CGACTGCATCATCATCTCTTGATCTCTCTCTCTTAGTTAAGTTGGATGCTTGTCACGGAT 311 consensus_10366#3 CGACTGCATCATCATCTCTTGATCTCTCTCTCTTAGGTAAGTTGGATGCTTGTCACGGAT 77 consensus_10366#0 CGACTGCATCATCATCTCTTGATCTCTCTCTCTTAGTTAAGTTGGATGCTTGTCACGGAT 1980 consensus_10366#2 CTACGGCAG-GTAATCT-TTATTATTTTTTTCATCAATCAATCAATCCATCATC-TGTAA 307 * ** *** * **** ** * * * * ** * * * * * ** * * consensus_10366#1 GTTTGTACCTGATCTCCATCAACTA--CATCTGATGCTATAGCCCATATGGTACCACTAC 369 consensus_10366#3 GTTTGTACCTGATCTCCATCTACTA--CATCTGATGCTATAGCCCATATG---------- 125 consensus_10366#0 GTTTGTACCTGATCTCCATCAACTA--CATCTGATGCTATAGCCCATATG---------- 2028 consensus_10366#2 GTAAGTACTAGTACTATAGAGACCATTCATCTCGTCTCTTAGGCGATATGGT-------- 359 ** **** * ** * ** * ***** * *** * ***** consensus_10366#1 TGTGTTTATTATCTATATTCGTCTTGTTGCAAGCTTGGTAGTAACTATATATACTTGACG 429 consensus_10366#3 ------------------------------------------------------------ consensus_10366#0 ------------------------------------------------------------ consensus_10366#2 ------------------------------------------------------------ consensus_10366#1 CTCTTGCTGCTCTTCCATTTGCAGCAGATGTACCGTCCTCTT-----CTTGGGGTCTCTG 484 consensus_10366#3 ------------------------CAGATGTACCGTCCTCTT-----CTTGGGGCCTCTG 156 consensus_10366#0 ---------------------------ATGTACCGTCCTCTT-----CTTGGGGTCTCTG 2056 consensus_10366#2 ---TTGCTTGGCTTAAACGGCTGTGGAAAGTCCTGTCTCCTCAAAGCTATAGGATGCCGG 416 * ** * *** ** * ** * * consensus_10366#1 GAGAATGAGGAAACAGCA---AGAGCCAGCCAGCATAGCATGTATGTATGTATAGTGT-- 539 consensus_10366#3 GAGAATGAGGAAACAGCA---AGAGCCAGCCAGCATAGCATGTATGTATGTATAGTGT-- 211 consensus_10366#0 GAGAATGAGGAAACAGCA---AGATCCAGCCAGCATAGCATGTATGTA----TAGTGT-- 2107 consensus_10366#2 GAGCTTCCTATCCCTCCACACATGGACATCTATCATCTCACCCATGAGATCGAGGCTTCC 476 *** * * ** * ** * * *** ** *** * * consensus_10366#1 -AATTAGCTGGTTTGTTGGCGGTGCACATGCATAAGATATACTTCCTCCGTTTTATATTA 598 consensus_10366#3 -AATTAGCTGGTTTGTTGGCGGTGCACATGCATAAGATATACTTCCTCCGTTTTATATTA 270 consensus_10366#0 -AATTAGCTGGTTTGTTGGCGGTGCACATGCATAAGATATACTTCCTCCGTTTCATATTA 2166 consensus_10366#2 GACATGTCTGCGCTACAAGCTGTCATCAGCTGTGACGAACAGAGACTCCAGCTCG-AGAA 535 * * *** * ** ** ** * * * * **** * * * consensus_10366#1 TAAGACTATCTAGTATTGCCCACATTCATATATATATATATGTCTAGATTCATTAGCATC 658 consensus_10366#3 TAAGACTATCTAGTATTGCCCCCATTCATATATATATATATGTCTAGATTCATTAGCATC 330 consensus_10366#0 TAATACTATCTATTATTGCCCACATTCATAT------ATATGTCTAGATTCATTAGCATC 2220 consensus_10366#2 GGAGGCTGA--AATCTTGGCCGC-TCAAGATG-ACGGTGGCGGCGAAGCCCTGGACCGCG 591 * ** * * *** ** * * * ** * * * * * * consensus_10366#1 TATATGAATG-TGGGCAATGATAGAAAGTCTTATAATATGAAACGGAG----GGAGTATT 713 consensus_10366#3 TATATGAATG-TGGGCAATGATAGAAAGTCTTATAATATGAAACGGAG----GGAGTATT 385 consensus_10366#0 TATATGAATG-TGGGCAATGATAGAAAGTCTTATAATATGAAACGGAG----GGAGTATT 2275 consensus_10366#2 TTTATGAACGCTTAGAAGCCATCGACGCATCCACCGCTGAAAAGCGTGCTGCAGAGATTT 651 * ****** * * * * ** ** * *** * * *** ** consensus_10366#1 ATCTTGGTTTGCACTTGCATGATCACCTGCTGTAGTTATTATTATCAGTGACCAAGTTCC 773 consensus_10366#3 ATCTTGGTTTGCCCTTGCATGATCCCCTGCCGTAGTTATTATTATCAGTGACCAAGTTCC 445 consensus_10366#0 ATCTTGGTTTGCACTTGCATGATCACCTGCTGTAGTTATTATTATCAGTGACCAAGTTCC 2335 consensus_10366#2 TGTTTGGCTTGGGTTTTAACAAGCACATGCAG--GCAAAGAAAACCCGTGATTTCTCTGG 709 **** *** ** * * * * *** * * * * * * **** * consensus_10366#1 C--CTAGC-TAGCAGTAGCACTCCATGAAAAGATATCTACATGGAGCTGTACCACCCCCA 830 consensus_10366#3 C--CTAGC-TAGCAGTAGCCCTCCATGAAAAGATATTTACATGAAACTGTACCCCCCCCC 502 consensus_10366#0 C--CTAGC-TAGCAGTAGCACTCCATGAAAAGATATCTACATGAAACTGTACCACCCCCA 2392 consensus_10366#2 CGGTTGGCGCATGANGATCGCTTTGGCTAGGGCGCTCTTCATGAATCCA-ACTATCCTTT 768 * * ** * * * * ** * * * * **** * * ** ** consensus_10366#1 CGATATTATATATGAGATTAAA-------------------------------------- 852 consensus_10366#3 CGATATTATATATGAGATTGGATTTTAAACTCTCGAGGGGATGTCTCATCGTTGCTTGTA 562 consensus_10366#0 CGATATTATATATGAGATTGGATTTTAAACTCTTGAGGGGATGTCTCATCGTTGCTTGTA 2452 consensus_10366#2 T----------------------------------------------------------- 769 consensus_10366#1 ------------------------------------------------------------ consensus_10366#3 TGTTAAATTGAGAAGATGTATTAACATGTGAAAAAAAAAAAAAAAA-------------- 608 consensus_10366#0 TGTTNAATTGAGAAGATGTATTANCATGTGATATATCTTATTATAAGCATTCAACTTAAA 2512 consensus_10366#2 ------------------------------------------------------------ consensus_10366#1 ---- consensus_10366#3 ---- consensus_10366#0 ATTT 2516 consensus_10366#2 ---- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||